|
|
TABLE 3.
Distribution of representative T-RFLP ribotypes and clone
types of archaeal rDNA obtained from a black smoker
chimneya
|
|
| Clone type (T-RFLP ribotype) |
No. of archaeal rDNA
clones characterized per subsample:
|
| I |
II |
III |
IV |
V |
VI
|
|
| MHVG-1 |
|
|
|
|
|
|
| pPACMA-Y
(9) |
1 |
3 |
0 |
0 |
0 |
0
|
| Crenarchaeota |
|
|
|
|
|
|
| Igniococcales |
|
|
|
|
|
|
| pPACMA-I
(5) |
7 |
2 |
0 |
11 |
0 |
0 |
| pPACMA-X
(5) |
13 |
4 |
0 |
25 |
3 |
0
|
| Euryarchaeota |
|
|
|
|
|
|
| Thermococcales |
|
|
|
|
|
|
| pPACMA-C
(6) |
19 |
25 |
29 |
0 |
0 |
0 |
| pPACMA-A
(6) |
0 |
0 |
9 |
0 |
0 |
0 |
| pPACMA-B
(6) |
0 |
0 |
2 |
0 |
0 |
0 |
| Unknown
group |
|
|
|
|
|
|
| pPACMA-N
(8) |
1 |
3 |
0 |
0 |
2 |
0
|
| DHVEG |
|
|
|
|
|
|
| pPACMA-M
(10) |
0 |
5 |
0 |
0 |
0 |
0 |
| pPACMA-Q
(10) |
2 |
0 |
1 |
0 |
0 |
0 |
| pPACMA-W
(7) |
0 |
1 |
1 |
0 |
0 |
0 |
| pPACMA-P
(7) |
1 |
2 |
2 |
0 |
0 |
0 |
| pPACMA-V
(7) |
0 |
3 |
1 |
0 |
0 |
0
|
| Halobacteriales |
|
|
|
|
|
|
| pPACMA-H
(3) |
0 |
0 |
0 |
0 |
9 |
21 |
| pPACMA-T
(3) |
0 |
0 |
0 |
0 |
0 |
7 |
| pPACMA-J
(4) |
0 |
0 |
0 |
1 |
0 |
0 |
| pPACMA-L
(3) |
0 |
0 |
0 |
1 |
5 |
8 |
| pPACMA-U
(4) |
0 |
0 |
0 |
0 |
0 |
5 |
| pPACMA-K
(4) |
0 |
0 |
0 |
2 |
0 |
0 |
| pPACMA-E
(4) |
0 |
0 |
0 |
3 |
31 |
10 |
| pPACMA-S
(4) |
0 |
0 |
0 |
0 |
1 |
0 |
| pPACMA-G
(4) |
0 |
0 |
0 |
1 |
0 |
0 |
| pPACMA-F
(4) |
0 |
0 |
0 |
0 |
13 |
2
|
| Total |
44 |
48 |
45 |
44 |
65 |
53 |
|
|
a
Composition of archaeal rDNA clone
types was determined by partial sequencing analysis of rDNA clones of
archaeal primer PCR libraries.
|