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Appl Environ Microbiol, January 1998, p. 43-52, Vol. 64, No. 1
0099-2240/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.

Purification and Properties of ArfI, an alpha -L-Arabinofuranosidase from Cytophaga xylanolyticadagger

Michael J. Renner and John A. Breznak*

Department of Microbiology and Center for Microbial Ecology, Michigan State University, East Lansing, Michigan 48824-1101

Received 9 October 1997/Accepted 15 October 1997

An alpha -L-arabinofuranosidase (alpha -L-arabinofuranoside arabinofuranohydrolase [EC 3.2.1.55]; referred to below as ArfI) from Cytophaga xylanolytica XM3 was purified 85-fold by anion-exchange and hydrophobic interaction column chromatography. The native enzyme had a pI of 6.1 and an apparent molecular mass of 160 to 210 kDa, and it appeared to be a trimer or tetramer consisting of 56-kDa subunits. With p-nitrophenyl-alpha -L-arabinofuranoside as the substrate, the enzyme exhibited a Km of 0.504 mM and a Vmax of 319 µmol · min-1 · mg of protein-1, and it had optimum activity at pH 5.8 and 45°C. ArfI was relatively stable over a pH range of 4 to 10 and at temperatures up to 45°C, and it retained nearly full activity when stored at 4°C for periods as long as 24 months. The enzyme also released arabinose from 4-methylumbelliferyl-alpha -L-arabinofuranoside, as well as from rye, wheat, corn cob, and oat spelt arabinoxylans and sugar beet arabinan, but not from arabinogalactan. ArfI showed no hydrolytic activity toward a range of p-nitrophenyl- or 4-methylumbelliferyl-glycosides other than arabinoside, for which it was entirely specific for the alpha -L-furanoside configuration. ArfI interacted synergistically with three partially purified endoxylanase fractions from C. xylanolytica in hydrolyzing rye arabinoxylan. However, cell fractionation studies revealed that ArfI was largely, if not entirely, cytoplasmic, so its activity in vivo is probably most relevant to hydrolysis of arabinose-containing oligosaccharides small enough to pass through the cytoplasmic membrane. Antibodies prepared against purified ArfI also cross-reacted with arabinofuranosidases from other freshwater and marine strains of C. xylanolytica, as well as with some proteins that did not possess arabinofuranosidase activity. To our knowledge, this is the first alpha -L-arabinofuranosidase to be purified and characterized from any gliding bacterium.


* Corresponding author. Mailing address: Department of Microbiology, Michigan State University, East Lansing, MI 48824-1101. Phone: (517) 355-6536. Fax: (517) 353-8957. E-mail: breznak{at}pilot.msu.edu.

dagger Dedicated to the memory of Richard M. Behmlander, whose love of science and good nature inspired us every day.




This article has been cited by other articles:

  • Kim, K. S., Lilburn, T. G., Renner, M. J., Breznak, J. A. (1998). arfI and arfII, Two Genes Encoding alpha -L-Arabinofuranosidases in Cytophaga xylanolytica. Appl. Environ. Microbiol. 64: 1919-1923 [Abstract] [Full Text]