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Applied and Environmental Microbiology, August 2000, p. 3344-3349, Vol. 66, No. 8
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Extensive Polymorphism in Cryptosporidium parvum
Identified by Multilocus Microsatellite Analysis
Xiaochuan
Feng,1
Stephen M.
Rich,1
Donna
Akiyoshi,1
James K.
Tumwine,2
Addy
Kekitiinwa,2
Nicolette
Nabukeera,2
Saul
Tzipori,1 and
Giovanni
Widmer1,*
Tufts University School of Veterinary
Medicine, Division of Infectious Diseases, North Grafton,
Massachusetts,1 and Mulago
Hospital, Makerere University, Kampala, Uganda2
Received 27 March 2000/Accepted 17 May 2000
Restriction fragment length polymorphism and DNA sequence analysis
discern two main types of Cryptosporidium parvum. We
present a survey of length polymorphism at several microsatellite loci for type 1 and type 2 isolates. A total of 14 microsatellite loci were
identified from C. parvum DNA sequences deposited in public databases. All repeats were mono-, di-, and trinucleotide repeats of A,
AT, and AAT, reflecting the high AT content of the C. parvum genome. Several of these loci showed significant length
polymorphism, with as many as seven alleles identified for a single
locus. Differences between alleles ranged from 1 to 27 bp. Karyotype
analysis using probes flanking three microsatellites localized each
marker to an individual chromosomal band, suggesting that these markers are single copy. In a sample of 19 isolates for which at least three
microsatellites were typed, a majority of isolates displayed a unique
multilocus fingerprint. Microsatellite analysis of isolates passaged
between different host species identified genotypic changes consistent
with changes in parasite populations.
*
Corresponding author. Mailing address: Tufts University
School of Veterinary Medicine, Bldg. 20, 200 Westboro Rd., North
Grafton, MA 01536. Phone: (508) 839-7944. Fax: (508) 839-7911. E-mail: gwidmer{at}infonet.tufts.edu.
Applied and Environmental Microbiology, August 2000, p. 3344-3349, Vol. 66, No. 8
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
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