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Applied and Environmental Microbiology, October 2001, p. 4671-4677, Vol. 67, No. 10
Marine Biotechnology Institute, Kamaishi
Laboratories, Heita, Kamaishi City, Iwate 026-0001, Japan
Received 2 April 2001/Accepted 20 July 2001
The sequences of the largest subunit of bacterial multicomponent
phenol hydroxylases (LmPHs) were compared. It was found that LmPHs
formed three phylogenetic groups, I, II, and III, corresponding to
three previously reported kinetic groups,
low-Ks (the half-saturation constant
in Haldane's equation for trichloroethylene [TCE]),
moderate-Ks, and
high-Ks groups. Consensus sequences
and specific amino acid residues for each group of LmPH were found,
which facilitated the design of universal and group-specific PCR
primers. PCR-mediated approaches using these primers were applied to
analyze phenol/TCE-degrading populations in TCE-contaminated aquifer
soil. It was found that the aquifer soil harbored diverse genotypes of
LmPH, and the group-specific primers successfully amplified LmPH
fragments affiliated with each of the three groups. Analyses of
phenol-degrading bacteria isolated from the aquifer soil confirmed the
correlation between genotype and phenotype. Competitive PCR assays were
used to quantify LmPHs belonging to each group during the enrichment of
phenol/TCE-degrading bacteria from the aquifer soil. We found that an
enrichment culture established by batch phenol feeding expressed low
TCE-degrading activity at a TCE concentration relevant to the
contaminated aquifer (e.g., 0.5 mg liter
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.10.4671-4677.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Group-Specific Monitoring of Phenol Hydroxylase
Genes for a Functional Assessment of Phenol-Stimulated
Trichloroethylene Bioremediation
1); group II and
III LmPHs were predominant in this batch enrichment. In contrast, group
I LmPHs overgrew an enrichment culture when phenol was fed
continuously. This enrichment expressed unexpectedly high TCE-degrading
activity that was comparable to the activity expressed by a pure
culture of Methylosinus trichosporium OB3b. These
results demonstrate the utility of the group-specific monitoring of
LmPH genes in phenol-stimulated TCE bioremediation. It is also suggested that phenol biostimulation could become a powerful TCE bioremediation strategy when bacteria possessing group I LmPHs are
selectively stimulated.
*
Corresponding author. Mailing address: Marine
Biotechnology Institute, Kamaishi Laboratories, 3-75-1 Heita, Kamaishi
City, Iwate 026-0001, Japan. Phone: 81-193-26-5781. Fax:
81-193-26-6592. E-mail:
kazuya.watanabe{at}kamaishi.mbio.co.jp.
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