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Applied and Environmental Microbiology, February 2001, p. 654-664, Vol. 67, No. 2
Departments of Crop
Sciences1 and
Microbiology,3 University of Illinois at
Urbana-Champaign, Urbana, Illinois 61801, and Departmento de
Protección Vegetal y Biotecnología, Instituto Valenciano
de Investigaciones Agrarias, Moncada 46113, Valencia,
Spain2
Received 26 July 2000/Accepted 16 November 2000
Iron-binding compounds were produced in various amounts in response
to iron starvation by a collection of Agrobacterium strains belonging to the species A. tumefaciens, A. rhizogenes, and
A. vitis. The crown gall biocontrol agent A. rhizogenes strain K84 produced a hydroxamate iron chelator in
large amounts. Production of this compound, and also of a previously
described antibiotic-like substance called ALS84, occurred only in
cultures of strain K84 grown in iron-deficient medium. Similarly,
sensitivity to ALS84 was expressed only when susceptible cells were
tested in low-iron media. Five independent Tn5-induced
mutants of strain K84 affected in the production of the hydroxamate
iron chelator showed a similar reduction in the production of ALS84.
One of these mutants, M8-10, was completely deficient in the production
of both agents and grew poorly compared to the wild type under
iron-limiting conditions. Thus, the hydroxamate compound has
siderophore activity. A 9.1-kb fragment of chromosomal DNA containing
the Tn5 insertion from this mutant was cloned and marker
exchanged into wild-type strain K84. The homogenote lost the ability to
produce the hydroxamate siderophore and also ALS84. A cosmid clone was
isolated from a genomic library of strain K84 that restored to strain
M8-10 the ability to produce of the siderophore and ALS84, as well as
growth in iron-deficient medium. This cosmid clone contained the region in which Tn5 was located in the mutant. Sequence analysis
showed that the Tn5 insert in this mutant was located in an
open reading frame coding for a protein that has similarity to those of
the gramicidin S synthetase repeat superfamily. Some such proteins are
required for synthesis of hydroxamate siderophores by other bacteria.
Southern analysis revealed that the biosynthetic gene from strain K84
is present only in isolates of A. rhizogenes that produce
hydroxamate-type compounds under low-iron conditions. Based on
physiological and genetic analyses showing a correlation between
production of a hydroxamate siderophore and ALS84 by strain K84, we
conclude that the two activities share a biosynthetic route and may be
the same compound.
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.2.654-664.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Iron-Binding Compounds from
Agrobacterium spp.: Biological Control Strain
Agrobacterium rhizogenes K84 Produces a Hydroxamate
Siderophore


*
Corresponding author. Mailing address: Department of
Crop Sciences, University of Illinois at Urbana-Champaign, 240 ERML, 1201 W. Gregory Dr., Urbana, IL 61801. Phone: (217) 333-1524. Fax:
(217) 244-7830. E-mail: stephenf{at}uiuc.edu.
Present address: Departamento de Protección Vegetal y
Biotecnología, Instituto Valenciano de Investigaciones
Agrarias, Moncada 46113, Valencia, Spain.
Present address: Institute des Sciences Végétales,
CNRS, F91198 Gif-sur-Yvette, France.
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