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Applied and Environmental Microbiology, August 2001, p. 3586-3597, Vol. 67, No. 8
Laboratory of Theoretical Production Ecology,
Wageningen University, 6700 AK Wageningen,1
and Laboratory of Microbiology, Wageningen University, 6703 CT Wageningen,2 The Netherlands
Received 27 December 2000/Accepted 10 May 2001
A mechanistic approach is presented to describe oxidation of the
greenhouse gas methane in the rice rhizosphere of flooded paddies by
obligate methanotrophic bacteria. In flooded rice paddies these
methanotrophs compete for available O2 with other types of
bacteria. Soil incubation studies and most-probable-number (MPN) counts
of oxygen consumers show that microbial oxygen consumption rates were
dominated by heterotrophic and methanotrophic respiration. MPN counts
of methanotrophs showed large spatial and temporal variability. The
most abundant methanotrophs (a Methylocystis sp.) and
heterotrophs (a Pseudomonas sp. and a
Rhodococcus sp.) were isolated and characterized. Growth
dynamics of these bacteria under carbon and oxygen limitations are
presented. Theoretical calculations based on measured growth dynamics
show that methanotrophs were only able to outcompete heterotrophs at
low oxygen concentrations (frequently <5 µM). The oxygen
concentration at which methanotrophs won the competition from
heterotrophs did not depend on methane concentration, but it was highly
affected by organic carbon concentrations in the paddy soil. Methane
oxidation was severely inhibited at high acetate concentrations. This
is in accordance with competition experiments between
Pseudomonas spp. and Methylocystis spp.
carried out at different oxygen and carbon concentrations. Likely,
methane oxidation mainly occurs at microaerophilic and low-acetate
conditions and thus not directly at the root surface. Acetate and
oxygen concentrations in the rice rhizosphere are in the critical range for methane oxidation, and a high variability in methane oxidation rates is thus expected.
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.8.3586-3597.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Methane Oxidation and the Competition for
Oxygen in the Rice Rhizosphere
*
Corresponding author. Present address: Free University
Amsterdam, Department of Systems Ecology, de Boelelaan 1087, 1081 HV Amsterdam, The Netherlands. Phone: 31 (0)20 4446964. Fax: 31 (0)20 4447123. E-mail: bodegom{at}bio.vu.nl.
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