Applied and Environmental Microbiology, July 2004, p. 4129-4135, Vol. 70, No. 7
0099-2240/04/$08.00+0 DOI: 10.1128/AEM.70.7.4129-4135.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Contribution of SAR11 Bacteria to Dissolved Dimethylsulfoniopropionate and Amino Acid Uptake in the North Atlantic Ocean
Rex R. Malmstrom,1 Ronald P. Kiene,2,3 Matthew T. Cottrell,1 and David L. Kirchman1*
College of Marine Studies, University of Delaware, Lewes, Delaware 19958,1
Department of Marine Sciences, University of South Alabama, Mobile, Alabama 36688,2
Dauphin Island Sea Lab, Dauphin Island, Alabama 365283
Received 20 December 2003/
Accepted 1 April 2004
SAR11 bacteria are abundant in marine environments, often accounting for 35% of total prokaryotes in the surface ocean, but little is known about their involvement in marine biogeochemical cycles. Previous studies reported that SAR11 bacteria are very small and potentially have few ribosomes, indicating that SAR11 bacteria could have low metabolic activities and could play a smaller role in the flux of dissolved organic matter than suggested by their abundance. To determine the ecological activity of SAR11 bacteria, we used a combination of microautoradiography and fluorescence in situ hybridization (Micro-FISH) to measure assimilation of 3H-amino acids and [35S]dimethylsulfoniopropionate (DMSP) by SAR11 bacteria in the coastal North Atlantic Ocean and the Sargasso Sea. We found that SAR11 bacteria were often abundant in surface waters, accounting for 25% of all prokaryotes on average. SAR11 bacteria were typically as large as, if not larger than, other prokaryotes. Additionally, more than half of SAR11 bacteria assimilated dissolved amino acids and DMSP, whereas about 40% of other prokaryotes assimilated these compounds. Due to their high abundance and activity, SAR11 bacteria were responsible for about 50% of amino acid assimilation and 30% of DMSP assimilation in surface waters. The contribution of SAR11 bacteria to amino acid assimilation was greater than would be expected based on their overall abundance, implying that SAR11 bacteria outcompete other prokaryotes for these labile compounds. These data suggest that SAR11 bacteria are highly active and play a significant role in C, N, and S cycling in the ocean.
* Corresponding author. Mailing address: College of Marine Studies, University of Delaware, 700 Pilottown Rd., Lewes, DE 19958. Phone: (302) 645-4375. Fax: (302) 645-4028. E-mail: kirchman{at}cms.udel.edu.
Applied and Environmental Microbiology, July 2004, p. 4129-4135, Vol. 70, No. 7
0099-2240/04/$08.00+0 DOI: 10.1128/AEM.70.7.4129-4135.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
This article has been cited by other articles:
-
Sowell, S. M., Norbeck, A. D., Lipton, M. S., Nicora, C. D., Callister, S. J., Smith, R. D., Barofsky, D. F., Giovannoni, S. J.
(2008). Proteomic Analysis of Stationary Phase in the Marine Bacterium "Candidatus Pelagibacter ubique". Appl. Environ. Microbiol.
74: 4091-4100
[Abstract]
[Full Text]
-
Johnston, A. W. B., Todd, J. D., Sun, L., Nikolaidou-Katsaridou, M. N., Curson, A. R. J., Rogers, R.
(2008). Molecular diversity of bacterial production of the climate-changing gas, dimethyl sulphide, a molecule that impinges on local and global symbioses. J Exp Bot
59: 1059-1067
[Abstract]
[Full Text]
-
Meyer, B., Kuever, J.
(2007). Molecular Analysis of the Diversity of Sulfate-Reducing and Sulfur-Oxidizing Prokaryotes in the Environment, Using aprA as Functional Marker Gene. Appl. Environ. Microbiol.
73: 7664-7679
[Abstract]
[Full Text]
-
Meyer, B., Kuever, J.
(2007). Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes. Microbiology
153: 3478-3498
[Abstract]
[Full Text]
-
Alonso-Saez, L., Gasol, J. M.
(2007). Seasonal Variations in the Contributions of Different Bacterial Groups to the Uptake of Low-Molecular-Weight Compounds in Northwestern Mediterranean Coastal Waters. Appl. Environ. Microbiol.
73: 3528-3535
[Abstract]
[Full Text]
-
Hamasaki, K., Taniguchi, A., Tada, Y., Long, R. A., Azam, F.
(2007). Actively Growing Bacteria in the Inland Sea of Japan, Identified by Combined Bromodeoxyuridine Immunocapture and Denaturing Gradient Gel Electrophoresis. Appl. Environ. Microbiol.
73: 2787-2798
[Abstract]
[Full Text]
-
Rogers, S. W., Moorman, T. B., Ong, S. K.
(2007). Fluorescent In Situ Hybridization and Micro-autoradiography Applied to Ecophysiology in Soil. Soil Sci.
71: 620-631
[Abstract]
[Full Text]
-
Baker, B. J., Tyson, G. W., Webb, R. I., Flanagan, J., Hugenholtz, P., Allen, E. E., Banfield, J. F.
(2006). Lineages of Acidophilic Archaea Revealed by Community Genomic Analysis. Science
314: 1933-1935
[Abstract]
[Full Text]
-
Eiler, A.
(2006). Evidence for the Ubiquity of Mixotrophic Bacteria in the Upper Ocean: Implications and Consequences. Appl. Environ. Microbiol.
72: 7431-7437
[Full Text]
-
Sintes, E., Herndl, G. J.
(2006). Quantifying Substrate Uptake by Individual Cells of Marine Bacterioplankton by Catalyzed Reporter Deposition Fluorescence In Situ Hybridization Combined with Microautoradiography. Appl. Environ. Microbiol.
72: 7022-7028
[Abstract]
[Full Text]
-
Howard, E. C., Henriksen, J. R., Buchan, A., Reisch, C. R., Burgmann, H., Welsh, R., Ye, W., Gonzalez, J. M., Mace, K., Joye, S. B., Kiene, R. P., Whitman, W. B., Moran, M. A.
(2006). Bacterial taxa that limit sulfur flux from the ocean.. Science
314: 649-652
[Abstract]
[Full Text]
-
Longnecker, K., Sherr, B. F., Sherr, E. B.
(2005). Activity and Phylogenetic Diversity of Bacterial Cells with High and Low Nucleic Acid Content and Electron Transport System Activity in an Upwelling Ecosystem. Appl. Environ. Microbiol.
71: 7737-7749
[Abstract]
[Full Text]
-
Elifantz, H., Malmstrom, R. R., Cottrell, M. T., Kirchman, D. L.
(2005). Assimilation of Polysaccharides and Glucose by Major Bacterial Groups in the Delaware Estuary. Appl. Environ. Microbiol.
71: 7799-7805
[Abstract]
[Full Text]
-
Pernthaler, J., Amann, R.
(2005). Fate of Heterotrophic Microbes in Pelagic Habitats: Focus on Populations. Microbiol. Mol. Biol. Rev.
69: 440-461
[Abstract]
[Full Text]
-
Giovannoni, S. J., Tripp, H. J., Givan, S., Podar, M., Vergin, K. L., Baptista, D., Bibbs, L., Eads, J., Richardson, T. H., Noordewier, M., Rappe, M. S., Short, J. M., Carrington, J. C., Mathur, E. J.
(2005). Genome Streamlining in a Cosmopolitan Oceanic Bacterium. Science
309: 1242-1245
[Abstract]
[Full Text]
-
Malmstrom, R. R., Cottrell, M. T., Elifantz, H., Kirchman, D. L.
(2005). Biomass Production and Assimilation of Dissolved Organic Matter by SAR11 Bacteria in the Northwest Atlantic Ocean. Appl. Environ. Microbiol.
71: 2979-2986
[Abstract]
[Full Text]
Copyright © 2004 by the American Society for Microbiology. All rights reserved.