This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Supplemental material
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Yutin, N.
Right arrow Articles by Béjà, O.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Yutin, N.
Right arrow Articles by Béjà, O.
Agricola
Right arrow Articles by Yutin, N.
Right arrow Articles by Béjà, O.

 Previous Article  |  Next Article 

Applied and Environmental Microbiology, December 2005, p. 8958-8962, Vol. 71, No. 12
0099-2240/05/$08.00+0     doi:10.1128/AEM.71.12.8958-8962.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.

SHORT REPORT

Novel Primers Reveal Wider Diversity among Marine Aerobic Anoxygenic Phototrophs{dagger}

Natalya Yutin,1 Marcelino T. Suzuki,2 and Oded Béjà1*

Department of Biology, Technion—Israel Institute of Technology, Haifa 32000, Israel,1 Chesapeake Biological Laboratory, University of Maryland Center for Environmental Sciences, P.O. Box 38, Solomons, Maryland 206882

Received 7 June 2005/ Accepted 23 August 2005

Aerobic anoxygenic phototrophic bacteria (AAnPs) were previously proposed to account for up to 11% of marine bacterioplankton and to potentially have great ecological importance in the world's oceans. Our data show that previously used primers based on the M subunit of anoxygenic photosynthetic reaction center genes (pufM) do not comprehensively identify the diversity of AAnPs in the ocean. We have designed and tested a new set of pufM-specific primers and revealed several new AAnP variants in environmental DNA samples and genomic libraries.


* Corresponding author. Mailing address: Department of Biology, Technion—Israel Institute of Technology, Haifa 32000, Israel. Phone: (972) 4829 3961. Fax: (972) 4822 5153. E-mail: beja{at}techunix.technion.ac.il.

{dagger} Supplemental material for this article may be found at http://aem.asm.org/.


Applied and Environmental Microbiology, December 2005, p. 8958-8962, Vol. 71, No. 12
0099-2240/05/$08.00+0     doi:10.1128/AEM.71.12.8958-8962.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.




This article has been cited by other articles:

  • Yutin, N., Suzuki, M. T., Rosenberg, M., Rotem, D., Madigan, M. T., Suling, J., Imhoff, J. F., Beja, O. (2009). BchY-Based Degenerate Primers Target All Types of Anoxygenic Photosynthetic Bacteria in a Single PCR. Appl. Environ. Microbiol. 75: 7556-7559 [Abstract] [Full Text]  
  • Contreras-Moreira, B., Sachman-Ruiz, B., Figueroa-Palacios, I., Vinuesa, P. (2009). primers4clades: a web server that uses phylogenetic trees to design lineage-specific PCR primers for metagenomic and diversity studies. Nucleic Acids Res 37: W95-W100 [Abstract] [Full Text]  
  • Salka, I., Moulisova, V., Koblizek, M., Jost, G., Jurgens, K., Labrenz, M. (2008). Abundance, Depth Distribution, and Composition of Aerobic Bacteriochlorophyll a-Producing Bacteria in Four Basins of the Central Baltic Sea. Appl. Environ. Microbiol. 74: 4398-4404 [Abstract] [Full Text]  
  • Waidner, L. A., Kirchman, D. L. (2008). Diversity and Distribution of Ecotypes of the Aerobic Anoxygenic Phototrophy Gene pufM in the Delaware Estuary. Appl. Environ. Microbiol. 74: 4012-4021 [Abstract] [Full Text]  
  • Waidner, L. A., Kirchman, D. L. (2007). Aerobic Anoxygenic Phototrophic Bacteria Attached to Particles in Turbid Waters of the Delaware and Chesapeake Estuaries. Appl. Environ. Microbiol. 73: 3936-3944 [Abstract] [Full Text]  
  • Okubo, Y., Futamata, H., Hiraishi, A. (2006). Characterization of Phototrophic Purple Nonsulfur Bacteria Forming Colored Microbial Mats in a Swine Wastewater Ditch. Appl. Environ. Microbiol. 72: 6225-6233 [Abstract] [Full Text]