This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Supplemental material
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Barns, S. M.
Right arrow Articles by Kuske, C. R.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Barns, S. M.
Right arrow Articles by Kuske, C. R.
Agricola
Right arrow Articles by Barns, S. M.
Right arrow Articles by Kuske, C. R.

 Previous Article  |  Next Article 

Applied and Environmental Microbiology, May 2007, p. 3113-3116, Vol. 73, No. 9
0099-2240/07/$08.00+0     doi:10.1128/AEM.02012-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Acidobacteria Phylum Sequences in Uranium-Contaminated Subsurface Sediments Greatly Expand the Known Diversity within the Phylum{triangledown} ,{dagger}

Susan M. Barns, Elizabeth C. Cain, Leslie Sommerville,{ddagger} and Cheryl R. Kuske*

Bioscience Division, M888, Los Alamos National Laboratory, Los Alamos, New Mexico 87545

Received 24 August 2006/ Accepted 22 February 2007

The abundance and composition of bacteria of the phylum Acidobacteria were surveyed in subsurface sediments from uranium-contaminated sites using amplification of 16S rRNA genes followed by clone/sequence analysis. Analysis of sequences from this study and public databases produced a revised and greatly expanded phylogeny of the Acidobacteria phylum consisting of 26 subgroups.


* Corresponding author. Mailing address: Bioscience Division, M888, Los Alamos National Laboratory, Los Alamos, NM 87545. Phone: (505) 665-4800. Fax: (505) 665-3024. E-mail: kuske{at}lanl.gov

{triangledown} Published ahead of print on 2 March 2007.

{dagger} Supplemental material for this article may be found at http://aem.asm.org/.

{ddagger} Present address: Chemistry Department, Ft. Lewis College, Durango, CO 81301.


Applied and Environmental Microbiology, May 2007, p. 3113-3116, Vol. 73, No. 9
0099-2240/07/$08.00+0     doi:10.1128/AEM.02012-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.




This article has been cited by other articles:

  • Rui, J., Peng, J., Lu, Y. (2009). Succession of Bacterial Populations during Plant Residue Decomposition in Rice Field Soil. Appl. Environ. Microbiol. 75: 4879-4886 [Abstract] [Full Text]  
  • Davis, J. P., Youssef, N. H., Elshahed, M. S. (2009). Assessment of the Diversity, Abundance, and Ecological Distribution of Members of Candidate Division SR1 Reveals a High Level of Phylogenetic Diversity but Limited Morphotypic Diversity. Appl. Environ. Microbiol. 75: 4139-4148 [Abstract] [Full Text]  
  • Ward, N. L., Challacombe, J. F., Janssen, P. H., Henrissat, B., Coutinho, P. M., Wu, M., Xie, G., Haft, D. H., Sait, M., Badger, J., Barabote, R. D., Bradley, B., Brettin, T. S., Brinkac, L. M., Bruce, D., Creasy, T., Daugherty, S. C., Davidsen, T. M., DeBoy, R. T., Detter, J. C., Dodson, R. J., Durkin, A. S., Ganapathy, A., Gwinn-Giglio, M., Han, C. S., Khouri, H., Kiss, H., Kothari, S. P., Madupu, R., Nelson, K. E., Nelson, W. C., Paulsen, I., Penn, K., Ren, Q., Rosovitz, M. J., Selengut, J. D., Shrivastava, S., Sullivan, S. A., Tapia, R., Thompson, L. S., Watkins, K. L., Yang, Q., Yu, C., Zafar, N., Zhou, L., Kuske, C. R. (2009). Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils. Appl. Environ. Microbiol. 75: 2046-2056 [Abstract] [Full Text]  
  • Cole, J. R., Wang, Q., Cardenas, E., Fish, J., Chai, B., Farris, R. J., Kulam-Syed-Mohideen, A. S., McGarrell, D. M., Marsh, T., Garrity, G. M., Tiedje, J. M. (2009). The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res 37: D141-D145 [Abstract] [Full Text]  
  • Koch, I. H., Gich, F., Dunfield, P. F., Overmann, J. (2008). Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils. Int. J. Syst. Evol. Microbiol. 58: 1114-1122 [Abstract] [Full Text]  
  • Hansel, C. M., Fendorf, S., Jardine, P. M., Francis, C. A. (2008). Changes in Bacterial and Archaeal Community Structure and Functional Diversity along a Geochemically Variable Soil Profile. Appl. Environ. Microbiol. 74: 1620-1633 [Abstract] [Full Text]  
  • Blothe, M., Akob, D. M., Kostka, J. E., Goschel, K., Drake, H. L., Kusel, K. (2008). pH Gradient-Induced Heterogeneity of Fe(III)-Reducing Microorganisms in Coal Mining-Associated Lake Sediments. Appl. Environ. Microbiol. 74: 1019-1029 [Abstract] [Full Text]