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Applied and Environmental Microbiology, March 2008, p. 1922-1931, Vol. 74, No. 6
0099-2240/08/$08.00+0     doi:10.1128/AEM.01720-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

Abundances and Distributions of the Dominant nifH Phylotypes in the Northern Atlantic Ocean{triangledown} ,{dagger}

Rebecca J. Langlois, Diana Hümmer, and Julie LaRoche*

Leibniz Institute for Marine Sciences, Duesternbrooker Weg 20, 24105 Kiel, Germany

Received 26 July 2007/ Accepted 22 January 2008

Understanding the factors that influence the distribution and abundance of marine diazotrophs is important in order to assess their role in the oceanic nitrogen cycle. Environmental DNA samples from four cruises to the North Atlantic Ocean, covering a sampling area of 0°N to 42°N and 67°W to 13°W, were analyzed for the presence and amount of seven nifH phylotypes using real-time quantitative PCR and TaqMan probes. The cyanobacterial phylotypes dominated in abundance (94% of all nifH copies detected) and were the most widely distributed. The filamentous cyanobacterial type, which included both Trichodesmium and Katagnymene, was the most abundant (51%), followed by group A, an uncultured unicellular cyanobacterium (33%), and gamma A, an uncultured gammaproteobacterium (6%). Group B, unicellular cyanobacterium Crocosphaera, and group C Cyanothece-like phylotypes were not often detected (6.9% and 2.3%, respectively), but where present, could reach high concentrations. Gamma P, another uncultured gammaproteobacterium, was seldom detected (0.5%). Water temperature appeared to influence the distribution of many nifH phylotypes. Very high (up to 1 x 106 copies liter–1) nifH concentrations of group A were detected in the eastern basin (25 to 17°N, 27 to 30°W), where the temperature ranged from 20 to 23°C. The highest concentrations of filamentous phylotypes were measured between 25 and 30°C. The uncultured cluster III phylotype was uncommon (0.4%) and was associated with mean water temperatures of 18°C. Diazotroph abundance was highest in regions where modeled average dust deposition was between 1 and 2 g/m2/year.


* Corresponding author. Mailing address: Leibniz Institute for Marine Sciences, Duesternbrooker Weg 20, 24105 Kiel, Germany. Phone: 49-431-600 4212. Fax: 11-49-431 600 4202. E-mail: jlaroche{at}ifm-geomar.de

{triangledown} Published ahead of print on 1 February 2008.

{dagger} Supplemental material for this article may be found at http://aem.asm.org/.


Applied and Environmental Microbiology, March 2008, p. 1922-1931, Vol. 74, No. 6
0099-2240/08/$08.00+0     doi:10.1128/AEM.01720-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.







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