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Applied and Environmental Microbiology, October 1998, p. 3838-3845, Vol. 64, No. 10
0099-2240/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Enzymatic Activity, Bacterial Distribution, and
Organic Matter Composition in Sediments of the Ross Sea
(Antarctica)
Mauro
Fabiano1 and
Roberto
Danovaro2,*
Istituto Scienze Ambientali Marine,
Università di Genova, Genoa,1 and
Cattedra di Biologia Marina, Facoltà di Scienze,
Università di Ancona, Monte D'Ago,
Ancona,2 Italy
Received 26 March 1998/Accepted 23 July 1998
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ABSTRACT |
Enzymatic activities of aminopeptidase and
-glucosidase were
investigated in Antarctic Ross Sea sediments at two sites (sites B and
C, 567 and 439 m deep, respectively). The sites differed in
trophic conditions related to organic matter (OM) composition and
bacterial distribution. Carbohydrate concentrations at site B were
about double those at site C, while protein and lipid levels were 10 times higher. Proteins were mainly found in a soluble fraction
(>90%). Chloropigment content was generally low and phaeopigments were almost absent, indicating the presence of reduced inputs of
primary organic matter. ATP concentrations (as a measure of the living
microbial biomass) were significantly higher at site B. By contrast,
benthic bacterial densities at site C were about double those at site
B. Bacterial parameters do not appear to be "bottom-up controlled"
by the amount of available food but rather "top-down controlled" by
meiofauna predatory pressure, which was significantly higher at site B. Aminopeptidase and
-glucosidase extracellular enzyme activities
(EEA) in Antarctic sediments appear to be high and comparable to those
reported for temperate or Arctic sediments and characterized by low
aminopeptidase/
-glucosidase ratios (about 10). Activity profiles
showed decreasing patterns with increasing sediment depth, indicating
vertical shifts in both availability and nutritional quality of
degradable OM. Vertical profiles of aminopeptidase activity were
related to a decrease in protein concentration and/or to an increase in
the insoluble refractory proteinaceous fraction. The highest
aminopeptidase activity rates were observed at site C, characterized by
much lower protein concentrations. Differences in EEA between sites do
not seem to be explained by differences in the in situ temperature (
1.6 and
0.8°C at sites B and C, respectively). Aminopeptidase activity profiles are consistent with the bacterial biomass and frequency of dividing cells. Enzyme substrate affinity was generally dependent upon substrate concentrations. EEA, normalized to bacterial numbers, indicated specific activities comparable to those reported for
equally deep sediments at temperate latitudes. Vertical patterns of
specific enzymatic activity appeared to be controlled by chloroplastic pigment concentrations that accumulate in the deeper sediment layers.
The overall conclusion from the analysis of EEA in Antarctic sediments
is that enzyme-dependent transformations of OM proceed at rates similar
to those measured in temperate environments. Protein carbon potentially
liberated by aminopeptidase activities (12.597 to 26.190 mg of C
m
2 day
1) indicates that the whole protein
pool could be mobilized within 1.3 to 17 h. Carbohydrate carbon
mobilization (773 to 2,552 mg of C m
2 day
1)
is sufficient to turn over the carbohydrate pool within 16 to 20 h. Such rates are 6 to 45 times higher than fluxes of particulate organic proteins and carbohydrates, indicating an "uncoupled
hydrolysis" by the Antarctic benthic assemblages, in which bacteria
appear to be able to rapidly exploit episodic OM pulses.
 |
INTRODUCTION |
In marine sediments, organic matter
(OM) diagenesis is largely dependent on bacterial activity
(13). Sedimentary organic material is largely composed of
high-molecular-weight compounds and particles unsuitable for direct
utilization by bacteria (52). Extracellular enzyme activity
(EEA) is generally recognized as the key step in degradation and
utilization of organic polymers by bacteria, since only compounds with
molecular mass lower than 600 Da can pass through cell pores (24,
27, 41).
Microbial degradation rates are dependent upon substrate composition,
as well as on molecular structure (2). The presence of
highly refractory compounds might significantly slow the conversion of
OM into bacterial biomass with consequences for benthic microbial loop
functioning. Previous studies reported that cycling of nitrogen compounds is largely influenced by the C/N ratio of OM in sediments (33) and that bacterial carbon conversion efficiency is
inversely related to detritus aging (53). Temperature has
also been identified as a factor controlling EEA (38), but
with few exceptions (48) the enzymes apparently do not
contain particular adaptations to cold environments (54).
The latter point appears to be of particular interest for understanding
OM cycling at high latitudes. In fact, compared to temperate regions,
polar oceans are characterized by very low EEA in the water column
(54) that, coupled with high sedimentation rates
(8), result in an accumulation of organic detritus of high
nutritional quality in the sediments (18, 20), potentially supporting large microbial biomasses (32). Previous studies carried out in the Antarctic revealed that benthic bacterial densities are comparable to those reported at temperate latitudes (14, 20). However, the very low bacterial production rates suggest that a large fraction of the bacterial assemblage is inactive (55). Therefore, the large accumulation of sedimentary OM
could be the result of an inefficient benthic microbial loop that is not able to channel organic detritus to higher trophic levels. Determination of the enzymatic activity in the sediments represents a
key parameter for understanding the actual role of bacteria in
Antarctic sediments.
Despite the importance of extracellular hydrolysis to bacteria and OM
cycling, factors controlling EEA in marine sediments remain poorly
understood, especially in the Antarctic ecosystem (31).
This study was carried out as a part of an integrated investigation
(ROSSMIZE [Ross Sea Marginal Ice Zone Ecology]) of planktonic and
benthic communities aimed at investigating pelagic-benthic coupling
processes in relation to melting of sea ice in the Ross Sea
(Antarctica). The aims of this study were (i) to assess the abundance,
biomass, and distribution of benthic bacterial assemblages in two
equally deep sites of the Ross Sea characterized by different available
organic matter inputs; (ii) to analyze their exoenzymatic activities in
relation to distribution and composition of the sedimentary organic
matter; and (iii) to compare the results with previous studies carried
out at different latitudes.
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MATERIALS AND METHODS |
Study site.
Sediment samples were collected in the Ross Sea
(Antarctica) (72 to 74°S, 174 to 175°E) during the first leg of the
X Italian Antarctic Expedition carried out by the R/V
ITALICA between 15 November 1994 and 4 January 1995. Samples
were taken from two different areas selected for mooring deployments:
site B (average depth, 567 m) and site C (average depth, 439 m) (Fig. 1). Site B is located in the
center of the northern part of the Joides basin and is characterized by
biosiliceous olive-grey mud sediments that become anoxic at 5 to 7 cm
(redox potential discontinuity layer). Site C is located in the
northern flank of the Mawson Bank, very close to the shelf break.
Sediments at site C are composed of sand, large amounts of gravel,
pebbles, and coarse biogenic carbonate debris and are characterized by
oxic conditions down to 15 cm. Site C is also characterized by high
near-bottom current velocities (up to 20 cm s
1). The two
sites contain different particulate organic material (19).
The entire study area (Fig. 1) is characterized by a gradient of
sedimentation rates: from 2.45 mg of OM m
2
day
1 in the polynyas (74°42'.411 S, 175°07'.280 E) to
1.79 mg of OM m
2 day
1 at site B
(74°00'.117 S, 175°01'.696 E). OM is here considered to be the sum
of protein and carbohydrate fluxes at 150 m of depth (from data
collected during the survey [15a]). Since the use of
multiple corers was precluded by the coarse sediment composition at
site C and by the presence of dispersed stones at site B, sediments were collected with a large USNEL-type box corer (0.2 m2).
At both sampling sites, three box corer samples were taken around the
mooring position, at about 0.2 to 0.5 miles from each other (see Table
1). For the analysis of the biochemical composition of sedimentary OM,
three replicate cores (from three different box corers) were collected
at each site. Immediately after sampling, sediment cores were
vertically divided into different layers: 0 to 1, 1 to 2, 2 to 5, 5 to
10, and 10 to 15 cm of depth at site B and 0 to 2, 2 to 5, and 5 to 10 cm of depth at site C. Sediments were placed in sterile petri dishes
and frozen at
20°C. For microbial analyses, subsamples (1 cm3), were collected from the same cores as collected for
OM analysis by using sterile syringes, with three to five replicates
per sediment layer. Samples were fixed with 0.2-µm-pore-filtered
seawater containing 2% buffered (sodium tetraborate, 20 g
liter
1) formalin and stored at 4°C.

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FIG. 1.
Sampling sites in the Ross Sea (Antarctica), with
indication of the polynya position during the cruise.
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Biochemical composition of sediment organic matter.
For all
biochemical analyses, 1 g of sediment was used. Lipids were
extracted from dried sediment samples by direct elution with chloroform
and methanol (3, 36). Lipid concentrations are reported as
tripalmitine equivalents. Protein analyses were carried out after
extractions with NaOH (0.5 M, 4 h) (25, 49). Soluble
and total protein concentrations were determined according to Fabiano
et al. (20). Concentrations are presented as albumin equivalents. Carbohydrates were analyzed according Gerchacov and Hatcher (23) and expressed as glucose equivalents. The
method is based on the same principle as the widely used method of
Dubois et al. (15) but is specifically adapted for
carbohydrate determination in sediments. Absorbance was measured at 485 and 600 nm (for correction of the turbidity). Soluble carbohydrates
were determined according to Fabiano et al. (20).
For each biochemical analysis, blanks were made with the same sediment
samples as previously treated in a muffle furnace (450°C, 2 h).
All analyses were carried out in four replicates per sediment layer.
Protein, carbohydrate, and lipid concentrations were converted to
carbon equivalents by using the following conversion factors: 0.49, 0.40, and 0.75 µg of C µg
1, respectively
(16). The sum of protein, carbohydrate, and lipid carbon was
referred as the biopolymeric carbon (BPC [sensu]) (21, 22).
Phytopigment analysis.
Chloroplastic pigments (chlorophyll
a and phaeopigments) were extracted from about 1 g of
sediment with 90% acetone. After centrifugation, the supernatant was
used to determine the chlorophyll a concentration and then
acidified with 0.1 N HCl to estimate phaeopigments (34).
Chloroplastic pigment equivalents (CPE) were defined as the sum of
chlorophyll a and phaeopigments. Chlorophyll a
concentrations were converted to carbon equivalents by using the
conversion factor 30 µg of C µg
1 (12).
Microbial parameters.
Each sediment replicate was added to 5 to 10 ml of 0.2-µm-pore-filtered and sterile seawater with
prefiltered formaldehyde (2%). Samples were sonicated three times
(Branson Sonifier 2200; 60 W for 1 min). Subsamples were diluted 100 to
500 times. Aliquots of the subsamples were stained with acridine orange
(5 mg 1
1) and filtered on black Nucleopore
0.2-µm-pore-size filters. The filters were analyzed by
epifluorescence microscopy (Zeiss Universal Microscope)
(43). The frequency of dividing cells (FDC) was determined
as the fraction of cells showing clear invagination. Bacteria were
divided into different size classes, and bacterial biovolume was
converted to carbon content assuming 310 fg of C per µm3
(21). Data were normalized to dry weight after desiccation (60°C, 24 h).
Immediately after sampling, triplicate subsamples (0.1 to 0.2 ml) were
extracted into 5.0 ml of boiling phosphate buffer (40 mM, pH 7.70 [7]) and analyzed by the firefly (Firefly Lantern FLE
50; Sigma) bioluminescence assay with an ATP photometer (model 3000;
Biospherical Instruments). Internal standards were used to correct for
losses of extractable ATP. ATP concentrations were converted to carbon
equivalents by using the factor 250 µg of C µg
1
(29).
Enzymatic activity.
Analyses of extracellular enzymatic
activities (
-D-glucosidase, MFU-
-glucopyranoside
[Glu-MFU], and aminopeptidase,
L-leucine-4-methylcoumarinyl-7-amide [Leu-MCA]) were
performed immediately after retrieval (39) as described
previously for deep-sea sediments (42). Sediment slurries were prepared by using 1:1 dilutions (vol/vol) (44) in
0.2-µm-pore-filtered (Puradisc TM25AS), sonicated, and autoclaved
bottom seawater (400 m deep). Incubations were performed at 1 atm
(45) in the dark and at in situ (
0.8 to
1.5°C)
temperatures (28) for 2 h. Enzymatic reactions were
started by adding increasing concentrations (12.5, 25, 50, 100, and 200 µM) of Glu-MFU and Leu-MCA in replicate sediment samples. Each
analysis was carried out at each sediment layer on two or three
replicates for substrate concentration. The saturating concentration
was 200 µM for both Glu-MFU and Leu-MCA. EEA rates increased linearly
with time up to 4 h (28, 42). After incubation, the
samples were centrifuged (3,000 rpm, 5 min) and the release of
fluorescent dye was measured with a Perkin-Elmer spectrofluorometer (model LS50B) at 380 excitation, 440 emission (for Glu-MFU
[28]) and at 365 excitation, 455 emission (for Leu-MCA
[39]). Solutions of fluorescein (0.1 to 1.0 µM) were
used as standards (freshly prepared with prefiltered seawater and
sterilized seawater [26]). Data were normalized to dry
weight (60°C, 24 h) and reported as nanomoles of fluorescein
released per gram of sediment per hour.
Data analysis.
Differences in microbial parameters between
sites were tested by nonparametric analysis (Kruskal-Wallis), as data
did not meet the assumption for parametric analysis (analysis of
variance) (51).
 |
RESULTS |
Environmental parameters.
Evident differences in sedimentary
structure were observed between sites. Site B was characterized by
muddy sediments with interspersed stones, whereas site C showed large
amounts of calcareous debris and briozoans in the top 2 cm, medium-size
sands in the sediment layers down to 10 cm, and fine sand-mud in the
bottom 10- to 15-cm layer (17). Such differences in grain
size were reflected by qualitative and quantitative differences in OM
biochemical composition. Proteins were the dominant biochemical class
of organic compounds. Protein concentrations at site B were 6 to 14 times higher than at site C (Fig. 2) and
ranged from 2,984 to 4,098 µg g
1 and from 507 to 232 µg g
1 (at sites B and C, respectively). Soluble
proteins represented the main fraction, accounting for 78 to 89% of
total protein concentrations at site B and for 95 to 98% at site C. Vertical patterns of total protein concentrations displayed a clear
decrease with depth only at site C. The second main biochemical class
was represented by carbohydrates (Fig. 2) that, at site B, showed
concentrations about double (range, 780 to 581 µg g
1
from the 0 to 1 and 10 to 15-cm sediment layers, respectively) those at
site C (range, 291 to 187 µg g
1 from the 0 to 2 and 5 to 10-cm sediment layers, respectively). Carbohydrate concentrations
appear to differ significantly with depth only between the top and the
lowest layers at site C. Soluble carbohydrates accounted only for a
minor fraction of the total carbohydrate concentration: on average,
about 10% at site B and 20% at site C. Finally, lipids (Fig. 2)
displayed the same trend reported for proteins, with the highest values
at site B (range, 301 to 518 µg g
1 from the 1 to 2 and
10 to 15-cm sediment layers, respectively) and the lowest
concentrations at site C (on average, 7 to 14 times higher than at site
B) (range, 54 to 23 µg g
1 from the 0 to 2 and 5 to
10-cm sediment layers, respectively). BPC concentrations were about 10 times higher at site B than at site C (integrated values down to the
10-cm depth, 2,285 and 231 µg of C g
1, respectively).
Data on chloroplastic pigments in the sediments are reported in Fig.
3. At site B, chlorophyll a
concentrations ranged from 0.6 ± 0.2 to 0.2 ± 0.2 µg
g
1 (10 to 15 and 2 to 5-cm depths; on average, 0.4 ± 0.4 µg g
1). At site C, chlorophyll a
concentrations ranged from 0.1 ± 0.0 to 0.2 ± 0.0 µg
g
1 (5 to 10 and 0 to 2-cm depths; on average, 0.3 ± 0.2 µg g
1). No phaeopigments were found at site C,
whereas at site B phaeopigment concentrations were quite constant with
sediment depth (0.1 ± 0.0 µg g
1). As a result,
CPE concentrations were about four times higher at site B than at site
C.

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FIG. 2.
Vertical distributions of the main biochemical classes
of organic compounds at sites B and C. Reported are proteins,
carbohydrates, and lipids. For proteins and carbohydrates, the
water-soluble fraction is illustrated. Standard deviations are
indicated (data are expressed in micrograms per gram [dry weight] of
sediment).
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FIG. 3.
Vertical distributions of phytopigment concentrations at
sites B and C. Reported are chlorophyll a, phaeopigments,
and CPE. Standard deviations are indicated (data are expressed in
micrograms per gram [dry weight] of sediment).
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Microbial parameters and enzymatic activities.
Vertical
patterns of bacterial density, biomass, and frequency of dividing cells
in the two sites are reported in Fig. 4. Bacterial density at site C (range, 3.6 × 108 to
12.7 × 108 cells g
1 of sediment at 5 to
10 and 0 to 2-cm depths, respectively) was about double that at site B
(range, 1.7 × 108 to 8.7 × 108
cells g
1 of sediment at 10 to 15 and 2 to 5-cm depths,
respectively). Bacterial density decreased regularly in the sediments
at site C, while it showed a peak at 2 to 5 cm of depth at site B. Bacterial biomass followed a similar pattern at site B (range, 14.1 to
79.8 µg of C g
1 of sediment at 5 to 10 and 2 to 5-cm
depths, respectively) but at site C showed a subsurface maximum at 2 to
5 cm of depth (101.0 µg of C g
1). FDC values were
generally higher at site C (range, 4.9 to 6.3%) than at site B (range,
3.9 to 4.7%). By contrast, ATP concentrations were significantly
higher at site B (integrated value, 718 ± 141 ng
g
1) than at site C (integrated value, 523 ± 39 ng
g
1) and did not display clear vertical patterns (Fig.
5). Total microbial biomass (as ATP
carbon equivalents) ranged between 179.6 (integrated values at site B)
and 101.6 µg of C g
1 (at site C). Bacterial
contribution to the total microbial biomass was significantly different
between sites, as bacterial biomass accounted for 17 and 64% at sites
B and C, respectively. The ATP carbon equivalent, in turn, accounted
for 8 and 41% of BPC at sites B and C, respectively.

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FIG. 4.
Vertical distributions of bacterial parameters at sites
B and C. Reported are bacterial` density (number of cells per gram
[dry weight] of sediment), bacterial biomass (micrograms of carbon
per gram), and FDC (percent). Standard deviations are indicated.
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FIG. 5.
Vertical distributions of ATP concentrations at sites B
and C. Standard deviations are indicated (data are expressed in
nanomolar concentrations per gram [dry weight] of sediment per
hour).
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Activity profiles of the two hydrolytic enzymes in the two sites are
presented in Fig. 6. Aminopeptidase
activities were, on average, two to three times higher at site C than
at site B, whereas
-glucosidase activities were clearly higher at
site B than at site C. Aminopeptidase activities were always higher
than
-glucosidase activities, with a ratio of 5:1 at site B and 34:1 at site C. Aminopeptidase activity in the top sediment layer ranged from 135.3 to 1,312.2 µM g
1 h
1 at site B
and from 1,968.0 to 2,728.2 µM g
1 h
1 at
site C, whereas
-glucosidase activity ranged from 139.3 to 265.8 µM g
1 h
1 at site B and from 23.4 to 80.5 at site C. The shape of the activity profile was dependent on site and
enzyme. In the upper 10 cm of sediment,
-glucosidase decreased 38%
at site B and 71% at site C, whereas aminopeptidase decreased 88% at
site B and 28% at site C. The kinetics of enzyme activity with
increasing substrate concentrations in the top 2 cm and in the deepest
layers of the sediments are illustrated in Fig.
7. Substrate affinity for aminopeptidase
was higher at site C than at site B (35 and 48 µM, respectively) and at both sites the highest Km values were found
in subsurface sediment layers. Km values for
-glucosidase were similar (25 and 30 µM at sites B and C,
respectively), but substrate affinity increased with depth in the
sediments. Vertical patterns of enzymatic activity rates normalized to
bacterial density are presented in Fig.
8. The highest aminopeptidase activities
were observed at site C (222 × 10
17 to 409 × 10
17 mol number of bacteria
1
h
1), while the highest
-glucosidase activities were
observed at site B (16.1 × 10
17 to 99.5 × 10
17 mol number of bacteria
1
h
1).

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FIG. 6.
Vertical distributions of aminopeptidase and
-glucosidase at sites B and C. Standard deviations are indicated
(data are expressed in nanomolar concentrations per gram [dry weight]
of sediment per hour).
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FIG. 7.
Substrate saturation curves for the hydrolysis of
Leu-MCA and Glu-MFU in the top 1 cm of sediment. Mean values from three
to five experiments are shown.
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FIG. 8.
Vertical profiles of aminopeptidase and -glucosidase
normalized to bacterial numbers. Data are expressed as molar
concentration times 10 17 per number of bacteria per
hour.
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The amounts of protein carbon potentially liberated by aminopeptidase
activity in the 0- to 1-cm horizon were 12,597 and 26,190 mg of C
m
2 day
1 at sites B and C, respectively,
whereas the amounts of carbohydrate carbon potentially liberated by
-glucosidase activity in the 0- to 1-cm horizon were 2,552 and 773 mg of C m
2 day
1 at sites B and C,
respectively. By converting total sedimentary carbohydrate and protein
concentrations to carbon equivalents, it is possible to estimate the
potential turnover rates of these two classes of organic compounds in
the studied sediments. All carbohydrates were potentially degraded in
16.3 and 20.1 h at sites B and C, respectively, whereas all
proteins were potentially degraded within 16.9 and 1.3 h at sites
B and C, respectively.
 |
DISCUSSION |
In Antarctica, low temperatures and low microbial activities in
the water column (9) determine low degradation rates and hence the accumulation of organic matter in the sediment (18, 20). In this study, we compared two sites characterized by quite evident trophic differences in terms of protein, carbohydrate, and
lipid concentrations. A strong gradient of sedimentation rates was
observed moving away from the polynyas (direction from site B to site C
[Fig. 1]) so that concentrations of sedimentary organic compounds
displayed significant differences between sites in agreement with the
particle flux gradient. Carbohydrate concentrations were indeed about
double at site B (with respect to site C), but the most evident
differences were observed in terms of protein and lipid concentrations
that were about 10 times higher at site B. OM concentrations (in terms
of protein, carbohydrate, and lipid content of the sediments) are quite
high compared with equally deep sediments in coastal areas at temperate
latitudes and similar to those reported in highly productive
environments (16, 38). A specific feature of OM composition
in Antarctic sediments is the high concentration of proteins, mostly
composed of soluble fraction (>90%). This is unusual, since in more
oligotrophic environments such as the eastern Mediterranean Sea,
soluble proteins generally account only for a minor fraction (10 to
20%) of the total proteinaceous material (11).
Phytopigment concentrations are assumed to represent a tracer of the
primary organic input to the sediment (44). According to the
patterns described for OM concentrations, chloropigment content was
higher at site B. The large contribution of chlorophyll a to
CPE at site B and the lack of phaeopigments at site C suggest the
presence of fresh OM inputs.
It is generally recognized that bacterial distribution is largely
dependent upon the amounts of utilizable OM in the sediments, which in
turn is largely controlled by the sedimentation and degradation rates
in the water column (10, 14). The different OM
concentrations at the two sites were reflected by ATP concentrations
(as an indicator of the microbial benthic biomass
[29]), which displayed significant differences between
sites (Kruskal-Wallis [P < 0.001]). However, benthic
bacteria displayed the opposite pattern, as bacterial densities at site
C were about double those at site B. These data are in contrast with
most studies on bacterial distribution in marine sediments, which have
found quite conservative bacterial densities in deep-sea sediments
(10, 11). Data from this study indicate that bacterial
abundance is not "bottom-up controlled" by the amount of
potentially available compounds or by sediment structure (muddy
sediments at site B versus coarse sandy sediments at site C).
Therefore, other factors must be considered. The benthic microbial loop
can play an important role in channelling organic detritus trough
bacteria to higher trophic levels (13). A synoptic study on
meiofaunal assemblages reported at site C densities six times lower
than at site B (17). As the meiofauna was found to be mostly
composed of selective and nonselective deposit feeders (35),
it is possible that bacterial densities at site B are "top-down
controlled" by meiofauna predatory pressure. If this is the case, the
low predatory pressures at site C allowed a strong enhancement of the
bacterial assemblages. However, other controlling factors might be
hypothesized. In addition to the limitation of microbial communities by
carbon, it has been shown that Antarctic bacterial populations might be
limited by the availability of iron.
Enzyme activity in natural sediments might provide important
indications of the OM flux crossing through the microbial loop as well
as of the quantity and quality of the OM available to heterotrophs.
However, despite the increasing use of fluorogenic substrates to assay
enzyme activity, no standardized protocols exist. The concentrations of
artificial substrate necessarily affect measured rates (39),
and moreover the use of sediment slurry (i.e., sediment dilution) might
underestimate the actual activity rates (45). In this study,
the activity rates reported are those detected at saturating substrate
concentrations (200 µM); therefore, comparisons with other studies
must be made with caution, as often subsaturating concentrations were
utilized (e.g., 10 µM [54]).
As previously reported for other coastal and deep-sea environments at
temperate and high latitudes (9, 30, 40), aminopeptidase displayed the highest activity (4, 5, 45). However, in this
study, aminopeptidase activity exceeded
-glucosidase activity by a
factor of 10. This result is anomalous, as most benthic and water
column studies reported aminopeptidase activity generally about 1,000 times higher than
-glucosidase (4, 9). In Celtic Sea
sediments, the ratio between aminopeptidase and
-glucosidase activity rates was found to increase with increasing water depth (Leu-MCA/Glu-MFU ratio increased from 91 at 135 m to 567 at 1,680 m of depth) (46). Also, with respect to latitudinal
patterns, the Leu-MCA/Glu-MFU ratio is expected to increase in
Antarctica (9). As enzyme activities are stimulated by OM
availability, it is possible that the relatively low
aminopeptidase/
-glucosidase ratios found in our study are due to the
high nutritional quality of the carbohydrate pools (soluble fraction of
10 to 20% versus about 1 to 5% in other deep-sea environments
[11]).
Few data on sedimentary EEA are available in the literature for
comparison. EEA rates (aminopeptidase and
-glucosidase) in Antarctic
sediments appear to be comparable to those reported in temperate and
Arctic sediments (Table 1). In
particular,
-glucosidase activity values observed in Antarctic
sediments (at 436 to 566 m of depth) appear to be in good
agreement with those reported for deep-sea sediments of the
northeastern Atlantic (4) although lower than those reported
for coastal areas (39) and in intertidal sediments
(31). Aminopeptidase activities appear to be generally lower
than those reported for deep-sea or coastal sediments but within the
same range as those reported for Arctic sediments (54). Values reported in this study, however, are higher than those reported
in the continental slope of the Celtic Sea, where a high substrate
concentration (1,000 µM [46]) was utilized.
Therefore, values from the Celtic Sea are likely to be actually lower
than those reported for Antarctic sediments at similar depths.
EEA activities in Antarctic sediments appeared to be highly site
specific. The highest aminopeptidase activity rates were observed at
site C, characterized by protein concentrations about 10 times lower
than at site B. By contrast,
-glucosidase activities were
significantly higher at site B in the presence of slightly higher
carbohydrate concentrations. Differences in EEA activity between sites
can hardly be explained by differences in the in situ temperature
(
1.6 and
0.8°C at sites B and C, respectively). In this regard,
Q10 values of <2 were observed in most Arctic sediment samples (54). Therefore, differences of 0.8°C
between sites B and C are unlikely to determine an increase of two to three times the activity, as reported in this study. Alternatively, it
is possible that lower aminopeptidase activity rates at site B are due
to enzyme inhibition induced by the strong protein input. This
enzymatic response was observed in experimentally manipulated deep-sea
sediments (6), where a strong enhancement of
-glucosidase activity and nonresponse or inhibition of aminopeptidase activity with
addition of their relative substrates were observed. However, differences in terms of aminopeptidase activity rates are consistent with the higher bacterial biomass and FDC at site C. As reported by
other authors, aminopeptidase activities are the best descriptor for
actual bacterial activity (6, 9).
Comparison of the kinetic parameters at the two stations revealed that
substrate affinities were quite similar, although
Km values for aminopeptidase were slightly
higher at site B (characterized by higher protein concentrations)
whereas Km values for
-glucosidase were not
significantly different between the two sites (characterized by similar
carbohydrate concentrations).
The overall conclusion than can be obtained from the analysis of EEA in
Antarctic sediments is that enzyme-dependent transformations of OM are
able to proceed at rates similar to those measured in more temperate
environments.
The activity profiles showed decreasing patterns with increasing
sediment depth. This might indicate vertical shifts in both the
availability and nutritional quality of degradable OM (45). Vertical profiles of aminopeptidase activity at site C are consistent with a decrease in the total protein concentration. However, at site B
the strong decrease in aminopeptidase activity disagrees with the
increasing total protein concentration with depth into the sediment
core. The reason for such different patterns of OM concentration versus
EEA probably lie in the sedimentary protein pool composition. In fact,
it is expected that a significant fraction of the proteinaceous
material in sediment is refractory (16, 49). A detailed
analysis of the protein profiles revealed that insoluble proteins
(probably of more refractory composition) increased with increasing
depth in the sediment. By contrast, most of the protein concentration
at site C (95 to 98%) was soluble. Microbial decomposition of
resistant OM is considerably stimulated by the availability of easily
decomposable organic substances (50). Therefore, the
observed vertical patterns suggest that enzyme activity rates depend
upon OM composition (in terms of labile versus refractory compounds,
e.g., insoluble proteins).
In order to test changes in specific bacterial enzyme activity rates
with depth in the sediments, aminopeptidase and
-glucosidase activities were normalized to bacterial numbers (Fig. 8). Normalizing EEA is problematic, firstly because a large fraction of bacteria might
be inactive and secondly because the contributions of other organisms
to aminopeptidase and
-glucosidase activities are unknown. Few data
are available for comparison; specific
-glucosidase activity of
17.8 × 10
17 mol cell
1
h
1 was reported previously for deep-sea sediments
(4). Our results from Antarctic sediments are up to five
times higher. However, much higher specific rates (up to 232 × 10
17 mol cell
1 h
1) have been
reported in intertidal sediments (31). The comparison for
aminopeptidase revealed that specific activities in the top sediment
layer of Antarctic samples (222 × 10
17 and 409 × 10
17 mol cell
1 h
1,
respectively, for sites C and B) were about 5 to 10 times lower than
values reported for northeastern Atlantic deep-sea sediments (2,230 × 10
17 mol cell
1
h
1 [45] and 2,940 × 10
17 mol cell
1 h
1
[4]). Vertical patterns of enzyme specific activity
did not always decrease regularly with depth in the sediment (Fig. 8). For instance, an increase in the specific
-glucosidase activity was
observed at site B. Such a pattern did not reflect carbohydrate distribution but appeared to be consistent with chloroplastic pigment
distribution (CPE [Fig. 3]), which accumulated in the deeper sediment
layers. A similar increase of the specific aminopeptidase activity was
reported at site C. In this case, again, vertical patterns of total
protein concentration do not provide support for the interpretation of
this result. Site C was a high-energy system. Therefore, it is possible
that the strong bottom currents (up to 20 cm sec
1)
inhibited enzyme production and/or removed the enzymes released from
the top sediment layers.
The protein and carbohydrate carbon potentially liberated by the
aminopeptidase and
-glucosidase activities was compared with total
sedimentary protein and carbohydrate concentrations at the two stations
and with data obtained for protein and carbohydrate fluxes (only at
site B). In the top sediment horizon, 12,597 and 26,190 mg of protein C
m
2 day
1 (at sites B and C, respectively)
would be mobilized. These values compared to protein concentrations
converted to carbon equivalents and normalized to square meters
indicate that the entire protein pool could be mobilized within 17 and
1.3 h, respectively, for sites B and C. Similarly, mobilization
rates of 773 and 2,552 mg of carbohydrate C m
2
day
1 (at sites C and B, respectively) are potentially
able to mobilize the entire carbohydrate pool within 16 and 20 h
(at sites B and C, respectively). Moreover, at site B, such rates are 6 to 45 times higher than the input of particulate organic proteins (280 mg of C m
2 day
1) and carbohydrates (433 mg
of C m
2 day
1 [15a]).
Similar results were reported in the northeastern Atlantic, where even
higher discrepancies (a ratio of mobilized versus flux of about 200)
were found (45). Such discrepancies might be partially explained with the use of potential enzyme activity rates at saturated substrate concentrations. Using subsaturating substrate concentrations (12.5 µM) instead of 200 µM, activity rates would be three to five
times lower. Alternatively, EEA rates observed might be due to enzymes
produced and released during periods of much higher OM inputs that
remained in the system. This hypothesis has been recently proposed for
deep-sea sediments at temperate latitudes (5), so
differences between OM input and its biological utilization are not
limited to Antarctic sediments. This fact would suggest the presence of
an "uncoupled hydrolysis" strategy of the Antarctic benthic
assemblages in order to be able to exploit rapidly the episodic OM
pulses. In the future, the analysis of chitinase and aminoglycosidase
activities should allow clarification of the extent of bacterial
utilization of other carbon sources in Antarctic sediments.
 |
ACKNOWLEDGMENTS |
Roberto Danovaro is particularly indebted to F. Faranda
(responsible for the project Ecology and Biogeochemistry of the
Southern Ocean) and the crew of the R/V ITALICA for
collaboration during sampling. Two anonymous referees greatly improved
the quality of the manuscript. We also thank A. Dell'Anno and S. Vanucci for stimulating suggestions, L. Guglielmo (chief of expedition,
University of Messina), M. Ravaioli (IGM, Bologna, Italy), P. Povero,
and C. Misic (Genoa, Italy) for kindly providing all facilities on board.
This work has been undertaken as part of the National Programme
for Antarctic Research (PNRA) funded by the Ministero
dell'Università e Ricerca Scientifica e Tecnologica of
Italy.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Marine Biology
Section, Faculty of Science, University of Ancona, Via Brecce Bianche, Monte D'Ago, 60131 Ancona, Italy. Phone: 39 71 220 4654. Fax: 39 71 220 4650. E-mail: danovaro{at}popcsi.unian.it.
 |
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Applied and Environmental Microbiology, October 1998, p. 3838-3845, Vol. 64, No. 10
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