Previous Article | Next Article 
Applied and Environmental Microbiology, August 1998, p. 3023-3024, Vol. 64, No. 8
0099-2240/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Oxidation of Trichloroethylene,
1,1-Dichloroethylene, and Chloroform by Toluene/o-Xylene
Monooxygenase from Pseudomonas stutzeri OX1
Sadhana
Chauhan,1
Paola
Barbieri,2 and
Thomas K.
Wood1,*
Department of Chemical and Biochemical
Engineering, University of California, Irvine, California
92697-2575,1 and
Dipartimento di
Genetica e di Biologia dei Microrganismi, Università degli studi
di Milano, 20133 Milan, Italy2
Received 24 February 1998/Accepted 8 June 1998
 |
ABSTRACT |
Toluene/o-xylene monooxygenase (ToMO) from
Pseudomonas stutzeri OX1, which oxidizes toluene and
o-xylene, was examined for its ability to degrade the
environmental pollutants trichloroethylene (TCE), 1,1-dichloroethylene
(1,1-DCE), cis-1,2-DCE, trans-1,2-DCE, chloroform, dichloromethane, phenol, 2,4-dichlorophenol,
2,4,5-trichlorophenol, 2,4,6-trichlorophenol,
2,3,5,6-tetrachlorophenol, and 2,3,4,5,6-pentachlorophenol. Escherichia coli JM109 that expressed ToMO from genes on
plasmid pBZ1260 under control of the lac promoter degraded
TCE (3.3 µM), 1,1-DCE (1.25 µM), and chloroform (6.3 µM) at
initial rates of 3.1, 3.6, and 1.6 nmol/(min · mg of protein),
respectively. Stoichiometric amounts of chloride release were seen,
indicating mineralization (2.6, 1.5, and 2.3 Cl
atoms per
molecule of TCE, 1,1-DCE, and chloroform, respectively). Thus, the
substrate range of ToMO is extended to include aliphatic chlorinated
compounds.
 |
INTRODUCTION |
Pseudomonas
stutzeri OX1 expressing toluene/o-xylene monooxygenase
(ToMO) is one of the few microorganisms that degrade
o-xylene (1, 4). This multicomponent enzyme has a
broad substrate range in that it has been shown to oxidize
o-xylene, m-xylene, p-xylene, toluene,
benzene, ethylbenzene, styrene, and naphthalene (3). ToMO is
a unique enzyme since it differs from other monooxygenases in that it
has a more relaxed regio-specificity (ToMO hydroxylates toluene in the
ortho, meta, and para positions as well as o-xylene in both
the 3 and 4 positions) (3). The gene order and the deduced
amino acid sequences are similar to those of the toluene 3-monooxygenase (T3MO) of Burkholderia pickettii PK01
(5) and toluene 4-monooxygenase (T4MO) of
Pseudomonas mendocina KR1 (17).
Given the toxicity, recalcitrance, and prevalence of the groundwater
contaminants trichloroethylene (TCE) and chloroform (12), and since other toluene monooxygenases degrade chlorinated compounds (9, 16), the ability of ToMO to degrade aromatic and
aliphatic chlorinated compounds was investigated. This paper reports
the ability of Escherichia coli JM109 expressing ToMO from
pBZ1260 to degrade and mineralize TCE, chloroform, and
1,1-dichloroethylene (1,1-DCE). pBZ1260 contains a 6-kb
chromosomal fragment from P. stutzeri OX1 encoding the ToMO
gene cluster (touABCDEF) cloned downstream of the
lac promoter in the
isopropyl-
-D-thiogalactopyranoside (IPTG)-inducible,
multicopy vector pGEM-3Z (3).
 |
MATERIALS AND METHODS |
Growth conditions.
E. coli JM109(pBZ1260) was grown at
37°C overnight in Luria-Bertani (LB) medium (10)
containing ampicillin (150 µg/ml; Sigma Chemical Co., St. Louis, Mo.)
and then subcultured in fresh medium at an optical density of 0.1 at
600 nm. When the culture attained an optical density of 0.8 to 1.0 (note that a blue, insoluble pigment was clearly seen), 1 mM IPTG
(Fisher Scientific, Fairlawn, N.J.) was added, and the cultures were
grown for an additional 2 h. Cells were harvested by
centrifugation at 2,000 × g for 15 min at 4°C (model
J2-21 centrifuge; Beckman; Palo Alto, Calif.). The cells were washed
twice with modified minimal salts (M9) medium (10) which
lacked chloride (MgSO4 [0.24 g/l] and CaSO4
[0.17 g/l] replaced MgCl2 and CaCl2) and
diluted to an optical density of 1.0 at 600 nm.
Chemicals.
TCE, chloroform, dichloromethane, and phenol were
purchased from Fisher Scientific (Tustin, Calif.), and 1,1-DCE,
cis-1,2-DCE, and trans-1,2-DCE were purchased
from Supelco, Inc. (Bellefonte, Pa.). The chlorinated phenols 2,4,5- and 2,4,6-trichlorophenol, and 2,3,4,5,6-pentachlorophenol were
purchased from Sigma Chemical Co. 2,3,5,6-Tetrachlorophenol was
purchased from AccuStandard, Inc. (New Haven, Conn.), and
2,4-dichlorophenol was purchased from Eastman Kodak Co. (Rochester,
N.Y.). All materials used were of the highest purity available and were
used without further purification.
Extents of degradation and initial degradation rates.
To
determine the extents of degradation of the chlorinated aliphatics and
the initial degradation rates of TCE, chloroform, and 1,1-DCE, these
compounds were added at an initial concentration of 10 µM (assuming
all substrates to be in the liquid phase) from a 0.1 M stock solution
in N,N-dimethylformamide (Fisher Scientific). Ten
milliliters of IPTG-induced cells in M9 medium containing no chloride
was added to 60-ml glass vials to yield the actual liquid
concentrations shown in Table 1 (calculated with Henry's law constants
of 0.4, 1.39, and 0.11 for TCE [6], 1,1-DCE
[13], and chloroform [13],
respectively). The vials were shaken at room temperature at 200 rpm on
an IKA-Vibrax-VXR shaker (IKA-Works, Inc., Cincinnati, Ohio). The
concentrations of the chlorinated aliphatics were determined by gas
chromatography after 24 h (extent of degradation performed in
duplicate) and at 0, 5, 10, and 15 min after substrate addition
(initial degradation rate) by injecting a 10-µl headspace sample by
using a 50-µl gas-tight syringe (Hamilton, Reno, Nev.) into a 5890 Series II gas chromatograph (Hewlett-Packard Co., Palo Alto, Calif.)
equipped with an electron capture detector and fitted with a 0.1%
AT-1000 on an 80/100 Graphpac packed column (Alltech Associates, Inc.,
Deerfield, Ill.). The samples were analyzed isocratically with the
column and injector at 180°C and the detector at 210°C. To
determine the initial degradation rates, two independent experiments
were used for TCE, 1,1-DCE, and chloroform, and each of these
experiments had duplicate or triplicate vials. Both abiotic (no cells
plus chlorinated aliphatic) and biotic (live JM109 plus chlorinated
aliphatic) controls were used.
To determine the extents of degradation of phenol and the chlorinated
phenols, these compounds were added at 10 µM initial concentrations
(assuming all substrates to be in the liquid phase) to 25-ml liquid
cultures containing IPTG-induced cells in 250-ml Erlenmeyer flasks.
2,4-Dichlorophenol stock was prepared in ethanol, whereas the other
phenol stocks were prepared in water. After 4, 8, and 12 h, phenol
and 2,4-dichlorophenol were assayed by a colorimetric assay
(11), and the disappearance of the other phenols was
monitored by measuring the absorption at 310 nm for 2,4,5- and
2,4,6-trichlorophenol, 306 nm for 2,3,5,6-tetrachlorophenol, and 318 nm
for 2,3,4,5,6-pentachlorophenol. For each assay, cells were removed by
centrifugation prior to monitoring the absorbance change.
Plasmid stability.
After 2 h of induction with IPTG,
segregational plasmid stability of pBZ1260 in E. coli JM109
was measured at the time of the addition of the substrates TCE,
1,1-DCE, or chloroform and 15 min later (to cover the period of
the initial degradation experiments). Appropriate dilutions of the
culture were plated on LB plates and LB plates containing
ampicillin (150 µg/ml). The colonies were enumerated after incubating
the plates at 37°C overnight.
Chloride analysis and total protein.
Chloride released by
the degradation of TCE, 1,1-DCE, and chloroform was measured in
duplicate by a colorimetric assay after 24 h (2). After
cells were removed from a 1-ml sample by centrifugation, 200 µl of
0.25 M ferric ammonium sulfate in 9 N HNO3 and 200 µl of
saturated mercuric thiocyanate in ethanol were added and incubated for
10 min, and then the absorbance at 460 nm was measured. Total protein
of cells at an absorbance of 1.0 (at 600 nm) was determined with a
Sigma Diagnostics Protein Assay Kit (catalog no. P 5656).
 |
RESULTS AND DISCUSSION |
ToMO expressed in E. coli JM109 was tested for the
ability to oxidize TCE, 1,1-DCE, cis-1,2-DCE,
trans-1,2-DCE, chloroform, dichloromethane, phenol,
2,4-dichlorophenol, 2,4,5-trichlorophenol, 2,4,6-trichlorophenol,
2,3,5,6-tetrachlorophenol, and 2,3,4,5,6-pentachlorophenol by
looking for the disappearance of the starting compounds (extents of
degradation). TCE, 1,1-DCE, and chloroform were degraded overnight (>95% removed), whereas there was no significant degradation of the
other compounds. For these three compounds, the degradation was further
characterized by calculating the initial rates of degradation (Table
1). The initial degradation rates (at 0 to 5 min) were also corroborated in all cases by the results at later time points; for example, the degradation rates at 0 to 10 min and 0 to
15 min corroborated those at 0 to 5 min. During these initial
degradation rate experiments, the plasmid was present in about 85% of
the cells, and there was no significant loss of these chlorinated
aliphatics in the abiotic controls as well as after 15 min or 20 h
in the presence of live JM109 cells which lacked the ToMO genes (no
plasmid-negative control; 20-h losses of 0, 13, and 0% for TCE,
1,1-DCE, and CHCl3, respectively).
To our knowledge, this is the first report of 1,1-DCE oxidation by an
aromatic monooxygenase (note: purified toluene dioxygenase [TDO] has
recently been shown to oxidize 1,1-DCE [8]). The initial rate of degradation for 1,1-DCE by ToMO was found to be 1.5 times higher than that by soluble methane monooxygenase (sMMO) from
Methylosinus trichosporium OB3b (adjusted to 1.3 µM by using the reported maximum initial velocity and
Km) (15). Furthermore, a comparison
of the initial rates of degradation of TCE (3.3 µM) by ToMO from
E. coli JM109(pBZ1260) induced with 1.0 mM IPTG with those
of other monooxygenases shows that the ToMO rate is comparable to that
of T4MO of P. mendocina KR1 (5.98 nmol/[min · mg of
protein] at 3.7 µM) (16), toluene
o-monooxygenase (T2MO) of Burholderia cepacia
(4.18 nmol/[min · mg of protein] at 3.7 µM) (16),
TDO of Pseudomonas putida F1 (3.49 nmol/[min · mg of
protein] at 3.7 µM) (16), and T3MO of B. pickettii PKO1 (2.4 nmol/[min · mg of protein] at 40 µM, but measured over 2 h) (9) when these other
organisms are induced with toluene or phenol.
Very few organisms are capable of degrading chloroform under aerobic
conditions, and it has been shown that T2MO, TDO, and T3MO do not
degrade chloroform whereas T4MO and sMMO of M. trichosporium OB3b are capable of oxidizing it (7, 12); hence, there is only one other report of oxidation of chloroform by an aromatic oxygenase (12). Degradation of chloroform by ToMO at 6.3 µM was 3 times faster than that by T4MO at 16 µM (a concentration 2.5 times higher) and 100 times slower than that by sMMO at 6.3 µM
(12, 15).
To quantify the extent of mineralization, chloride release was assayed
and found to be 2.6 Cl
atoms per TCE molecule, 1.5 Cl
atoms per 1,1-DCE molecule, and 2.3 Cl
atoms per chloroform molecule (no chloride was released in
JM109(pBZ1260) controls which lacked a chlorinated substrate). This
indicates stoichiometric amounts of inorganic chloride were released;
hence, ToMO is capable of completely mineralizing these compounds to a
degree seen previously for TCE with T2MO of B. cepacia
(14, 16), T4MO of P. mendocina KR1
(16), and TDO of P. putida F1 (16).
 |
ACKNOWLEDGMENTS |
This study was supported by the U.S. Army Research Office
(DAAH04-95-1-0310) and Lucky-Goldstar Industrial Systems, Co., Inc. (LGIS-2236).
 |
FOOTNOTES |
*
Corresponding author. Present address:
Department of Chemical Engineering, University of Connecticut, Storrs,
CT 06269-3222. Phone: (860) 486-4019. Fax: (860) 486-2959.
 |
REFERENCES |
| 1.
|
Baggi, G.,
P. Barbieri,
E. Galli, and S. Tollari.
1987.
Isolation of a Pseudomonas stutzeri strain that degrades o-xylene.
Appl. Environ. Microbiol.
53:2129-2132[Abstract/Free Full Text].
|
| 2.
|
Bergmann, J. G., and J. Sanik.
1957.
Determination of trace amounts of chlorine in naptha.
Anal. Chem.
29:241-243.
|
| 3.
|
Bertoni, G.,
F. Bolognese,
E. Galli, and P. Barbieri.
1996.
Cloning of the genes for and characterization of the early stages of toluene and o-xylene catabolism in Pseudomonas stutzeri OX1.
Appl. Environ. Microbiol.
62:3704-3711[Abstract].
|
| 4.
|
Bickerdike, S. R.,
R. A. Holt, and G. M. Stephens.
1997.
Evidence for metabolism of o-xylene by simultaneous ring and methyl group oxidation in a new soil isolate.
Microbiology
143:2321-2329.
|
| 5.
|
Byrne, A. M.,
J. J. Kukor, and R. H. Olsen.
1995.
Sequence analysis of the gene cluster encoding toluene-3-monooxygenase from Pseudomonas pickettii PK01.
Gene
154:65-70[Medline].
|
| 6.
|
Folsom, B. R.,
P. J. Chapman, and P. H. Pritchard.
1990.
Phenol and trichloroethylene degradation by Pseudomonas cepacia G4: kinetics and interactions between substrates.
Appl. Environ. Microbiol.
56:1279-1285[Abstract/Free Full Text].
|
| 7.
|
Jahng, D., and T. K. Wood.
1994.
Trichloroethylene and chloroform degradation by a recombinant pseudomonad expressing soluble methane monooxygenase from Methylosinus trichosporium OB3b.
Appl. Environ. Microbiol.
60:2473-2482[Abstract/Free Full Text].
|
| 8.
|
Lange, C. C., and L. P. Wackett.
1997.
Oxidation of aliphatic olefins by toluene dioxygenase: enzyme rates and product identification.
J. Bacteriol.
179:3858-3865[Abstract/Free Full Text].
|
| 9.
|
Leahy, J. G.,
A. M. Byrne, and R. H. Olsen.
1996.
Comparison of factors influencing trichloroethylene degradation by toluene-oxidizing bacteria.
Appl. Environ. Microbiol.
62:825-833[Abstract].
|
| 10.
|
Maniatis, T.,
E. F. Fritsch, and J. Sambrook.
1982.
Molecular cloning: a laboratory manual.
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
|
| 11.
|
Martin, R. W.
1949.
Rapid colorimetric estimation of phenol.
Anal. Chem.
21:1414-1420.
|
| 12.
|
McClay, K.,
B. G. Fox, and R. J. Steffan.
1996.
Chloroform mineralization by toluene-oxidizing bacteria.
Appl. Environ. Microbiol.
62:2716-2722[Abstract].
|
| 13.
|
Mercer, J. W., and R. M. Cohen.
1990.
A review of immiscible fluids in the subsurface: properties, models, characterization and remediation.
J. Contam. Hydrol.
6:107-163.
|
| 14.
|
Nelson, M. J. K.,
S. O. Montgomery,
W. R. Mahaffey, and P. H. Pritchard.
1987.
Biodegradation of trichloroethylene and involvement of an aromatic biodegradative pathway.
Appl. Environ. Microbiol.
53:949-954[Abstract/Free Full Text].
|
| 15.
|
Oldenhuis, R.,
J. Y. Oedzes,
J. J. van Der Waarde, and D. B. Janssen.
1991.
Kinetics of chlorinated hydrocarbon degradation by Methylosinus trichosporium OB3b and toxicity of trichloroethylene.
Appl. Environ. Microbiol.
57:7-14[Abstract/Free Full Text].
|
| 16.
|
Sun, A. K., and T. K. Wood.
1996.
Trichloroethylene degradation and mineralization by pseudomonads and Methylosinus trichosporium OB3b.
Appl. Microbiol. Biotechnol.
45:248-256[Medline].
|
| 17.
|
Yen, K.-M.,
M. R. Karl,
L. M. Blatt,
M. J. Simon,
R. B. Winter,
P. R. Fausset,
H. S. Lu,
A. A. Harcourt, and K. K. Chen.
1991.
Cloning and characterization of a Pseudomonas mendocina KR1 gene cluster encoding toluene-4-monooxygenase.
J. Bacteriol.
173:5315-5327[Abstract/Free Full Text].
|
Applied and Environmental Microbiology, August 1998, p. 3023-3024, Vol. 64, No. 8
0099-2240/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Sazinsky, M. H., Bard, J., Di Donato, A., Lippard, S. J.
(2004). Crystal Structure of the Toluene/o-Xylene Monooxygenase Hydroxylase from Pseudomonas stutzeri OX1: INSIGHT INTO THE SUBSTRATE SPECIFICITY, SUBSTRATE CHANNELING, AND ACTIVE SITE TUNING OF MULTICOMPONENT MONOOXYGENASES. J. Biol. Chem.
279: 30600-30610
[Abstract]
[Full Text]
-
Tao, Y., Fishman, A., Bentley, W. E., Wood, T. K.
(2004). Altering Toluene 4-Monooxygenase by Active-Site Engineering for the Synthesis of 3-Methoxycatechol, Methoxyhydroquinone, and Methylhydroquinone. J. Bacteriol.
186: 4705-4713
[Abstract]
[Full Text]
-
Rui, L., Kwon, Y. M., Fishman, A., Reardon, K. F., Wood, T. K.
(2004). Saturation Mutagenesis of Toluene ortho-Monooxygenase of Burkholderia cepacia G4 for Enhanced 1-Naphthol Synthesis and Chloroform Degradation. Appl. Environ. Microbiol.
70: 3246-3252
[Abstract]
[Full Text]
-
Vardar, G., Wood, T. K.
(2004). Protein Engineering of Toluene-o-Xylene Monooxygenase from Pseudomonas stutzeri OX1 for Synthesizing 4-Methylresorcinol, Methylhydroquinone, and Pyrogallol. Appl. Environ. Microbiol.
70: 3253-3262
[Abstract]
[Full Text]
-
Cafaro, V., Izzo, V., Scognamiglio, R., Notomista, E., Capasso, P., Casbarra, A., Pucci, P., Di Donato, A.
(2004). Phenol Hydroxylase and Toluene/o-Xylene Monooxygenase from Pseudomonas stutzeri OX1: Interplay between Two Enzymes. Appl. Environ. Microbiol.
70: 2211-2219
[Abstract]
[Full Text]
-
Rapp, P., Gabriel-Jurgens, L. H. E.
(2003). Degradation of alkanes and highly chlorinated benzenes, and production of biosurfactants, by a psychrophilic Rhodococcus sp. and genetic characterization of its chlorobenzene dioxygenase. Microbiology
149: 2879-2890
[Abstract]
[Full Text]
-
Canada, K. A., Iwashita, S., Shim, H., Wood, T. K.
(2002). Directed Evolution of Toluene ortho-Monooxygenase for Enhanced 1-Naphthol Synthesis and Chlorinated Ethene Degradation. J. Bacteriol.
184: 344-349
[Abstract]
[Full Text]