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Applied and Environmental Microbiology, December 1999, p. 5257-5264, Vol. 65, No. 12
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Attributes of Atmospheric Carbon Monoxide Oxidation
by Maine Forest Soils
G. M.
King*
Darling Marine Center, University of Maine,
Walpole, Maine 04573
Received 21 July 1999/Accepted 21 September 1999
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ABSTRACT |
CO, one of the most important trace gases, regulates tropospheric
methane, hydroxyl radical, and ozone contents. Ten to 25% of the
estimated global CO flux may be consumed by soils annually. Depth
profiles for 14CO oxidation and CO concentration indicated
that CO oxidation occurred primarily in surface soils and that
photooxidation of soil organic matter did not necessarily contribute
significantly to CO fluxes. Kinetic analyses revealed that the apparent
Km was about 18 nM (17 ppm) and the
Vmax was 6.9 µmol g (fresh
weight)
1 h
1; the apparent
Km was similar to the apparent
Km for atmospheric methane consumption, but the
Vmax was more than 100 times higher. Atmospheric CO oxidation responded sensitively to soil water regimes; decreases in water content in initially saturated soils resulted in
increased uptake, and optimum uptake occurred at water contents of 30 to 60%. However, extended drying led to decreased uptake and net CO
production. Rewetting could restore CO uptake, albeit with a pronounced
hysteresis. The responses to changing temperatures indicated that the
optimum temperature for net uptake was between 20 and 25°C and that
there was a transition to net production at temperatures above 30°C.
The responses to methyl fluoride and acetylene indicated that
populations other than ammonia oxidizers and methanotrophs must be
involved in forest soils. The response to acetylene was notable, since
the strong initial inhibition was reversed after 12 h of
incubation; in contrast, methyl fluoride did not have an inhibitory
effect. Ammonium did not inhibit CO uptake; the level of nitrite
inhibition was initially substantial, but nitrite inhibition was
reversible over time. Nitrite inhibition appeared to occur through
indirect effects based on abiological formation of NO.
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INTRODUCTION |
Tropospheric methane concentrations
exceed tropospheric carbon monoxide concentrations (100 to 300 ppb) by
up to 17-fold (16, 51). However, CO emission (about 2,500 Tg
year
1 [16, 35]) exceeds methane emission
by about fivefold. The discrepancy in the values is due to the high
rate of reaction between CO and hydroxyl radical (OH·), the major
tropospheric oxidant (16, 50). As a result of its reactivity
and flux, CO is a critical component of atmospheric chemical systems
and directly and indirectly affects numerous trace gases (16, 21, 34, 35, 50, 51).
Compared with methane biogeochemistry, relatively little is known about
CO biogeochemistry (11). The anthropogenic sources and
atmospheric fates of CO have been the subjects which have received the
greatest attention since CO contributes to ground level ozone
(51) and since projected indirect greenhouse warming due to
increasing CO concentrations is equivalent to the direct effects of
increasing levels of nitrous oxide (18). Nonetheless, a
series of early studies and more recent work indicated that consumption
of atmospheric CO by soils has a significant impact on the global CO
budget (2, 11, 16), although the amount consumed (190 to 630 Tg year
1) is controversial (29, 40). However,
neither the microbiology of CO consumption nor control of microbial
activity is well understood. The relevant microbial populations remain
unknown (11), but they may include populations of
methanotrophs, ammonia oxidizers, and CO-oxidizing heterotrophs (e.g.,
carboxydotrophs). The key determinants of CO oxidation rates include
temperature and water content (12, 14, 19, 22, 38, 47), but
a variety of other parameters (e.g., salts, nitrogen sources, and
organic substrates) may also affect activity, as is the case for
methane oxidation.
In this study the distribution of CO oxidizers and CO oxidation was
examined by using rate estimates and small-scale CO depth profiles. The
soil water regimes studied involved both wetting and drying regimes in
order to simulate conditions typically encountered in situ. Responses
to temperature included assays of active and microwave-inactivated
soils so that CO oxidation and abiological CO production could be
studied separately. The relevant functional groups were analyzed by
examining responses to potential inhibitors and to various inorganic
and organic substrates.
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MATERIALS AND METHODS |
Sampling sites in a mixed hardwood-conifer forest at the Darling
Marine Center (DMC) have been described previously (1, 30,
31). The soils at these sites have been classified as Typic
Haplorthods that have organic (O) horizons that vary in thickness (5 to
>10 cm); there is an abrupt transition to a relatively shallow mineral
(A) horizon. The O and A horizon pH values range from 3.8 to 4.7; the
average organic contents of the O and A horizons are about 45 and 5%,
respectively (1). The water contents vary seasonally from
saturation in the spring to <10% during dry periods in the summer and
early fall. The temperatures vary similarly; minimum temperatures of
<0°C occur in the winter, and maximum temperatures of approximately
20°C occur in the summer.
Soils were collected by using aluminum core tubes with an inside
diameter of 7.5 cm. Cores were extruded from the tubes and then
sectioned as necessary at intervals of 2 cm or more after the litter
layer was removed. A horizon soils were sieved (2-mm screen) to remove
small stones and stems. Soils were used at the ambient water contents,
or in some cases the water contents were adjusted as necessary by air
drying or by wetting with deionized water. Typically, 2.5 to 10 g
(fresh weight) of soil was transferred into a 110-cm3 jar;
soils were amended as necessary with aqueous solutions of salts or
other substrates. The jars were sealed with silicon stoppers and
incubated at the ambient laboratory temperature (20 to 22°C) unless
otherwise specified. Headspace samples were removed at intervals and
used either for a radioassay or a gas chromatographic analysis as
described below.
Depth profiles for CO in the soil atmosphere were determined as
described below by using soils at an unmanaged pine forest and a
cultivated field at the University of Georgia Agriculture Experiment
Station, Griffin, Ga., during November 1997. At the time of sampling,
the cultivated field had been harvested, and the surface was largely
bare. The soils at the sites used have not been classified by using
contemporary U.S. Department of Agriculture categories but have been
described as ultisols of the Lloyd series. At the field and forest
sites the soil temperatures varied seasonally between <10 and >40°C
and between <10 and 32°C, respectively, and the water contents
varied between 6 and 15% and between 6 and 96%, respectively.
Depth profiles.
The patterns of CO oxidation with depth in
the DMC soils were determined by adding 3.7 kBq of 14CO
(final total CO concentration, <1 ppm) to the headspaces of jars
containing 10 g (fresh weight) of soil obtained from selected depths. 14CO was prepared by using a
[14C]formate stock solution (3). Subsamples (1 cm3) were obtained at intervals from the jar headspaces
with a needle and syringe and used for 14CO2
production assays. 14CO2 was absorbed with 2 ml
of 0.1 N KOH in a sealed scintillation vial. Levels of radioactivity
were determined by liquid scintillation counting with an LKB Rackbeta
model 1219 counter after 10 ml of Scintiverse II scintillation fluid
(Fisher Scientific, Inc.) was added. A parallel set of soil samples was
assayed to determine rates of atmospheric methane utilization by
previously described methods (1).
In situ CO concentration depth profiles for the pine forest and
cultivated soils were determined by using a 1-cm3 syringe
fitted with a 50-mm-long 26-gauge side port needle positioned with a
micromanipulator at 2.5- to 5-mm intervals. The first samples of the
pine forest and cultivated soils were obtained at the O horizon and the
soil surface, respectively. A 1-cm3 sample was obtained
slowly (sampling time, about 60 s); the syringe was then raised,
and its contents were rapidly analyzed in the field by using gas
chromatography as described below. Subsequent samples were collected by
repositioning the syringe at the same entry point in the soil but at
greater depths. Profiles at both sites were obtained initially with
ambient illumination. Immediately after this, the soil surface was
darkened for 30 min by using a tarp. A second set of profiles was then
obtained in near darkness (the photosynthetically active radiation was
less than 10 microeinsteins cm
2 s
1) with
the tarp in place.
CO uptake kinetics.
Vmax and apparent
Km values were determined by using 3-g (fresh
weight) samples of DMC O horizon soils (water content, 38%) incubated
in jars with various headspace CO concentrations up to 25 ppm. At each
concentration, the uptake rates were determined by performing
short-term headspace assays (see below). The net uptake rates were
calculated by using a linear regression for high CO concentrations or
the method of Conrad and Seiler (12) for low concentrations;
the rates were plotted as a function of concentration, and kinetic
parameters were estimated by nonlinear curving fitting by using
Kaleidagraph software and the Michaelis-Menten model.
Responses to variations in water content.
Subsamples of a
large pooled sample of DMC O or A horizon soil were incubated in sealed
jars as described above at the ambient laboratory temperature with
atmospheric CO. After the net atmospheric CO oxidation rate was
determined at the ambient field water content, the jars were opened,
and the subsamples were mixed with the parent sample, which was then
air dried briefly at the ambient laboratory temperature. A portion of
the material was removed and used for a gravimetric analysis of the
water content. New subsamples were transferred to the jars, and the net
rate of CO oxidation (or production) was determined again. This cycle
was repeated until the desired minimum water content was reached. The
soil water content was then increased by adding deionized water
stepwise, and the oxidation rates were determined again.
Responses to variations in temperature.
Parallel sets of DMC
O horizon soils and sieved A horizon soils were incubated in triplicate
with the ambient atmospheric CO concentrations in sealed jars as
described above at temperatures ranging from 0 to 40°C. Net rates of
CO oxidation (or production) were determined by performing short-term
(<20-min) time course assays with jar headspace contents. Blanks (no
soil) revealed that CO off-gassing from jars and stoppers was
negligible. In addition, CO production rates were determined as a
function of incubation temperature for soils that had been microwaved
three times for 60 s each time with a nitrogen headspace to
inhibit microbial CO consumption.
Responses to inhibitors and nitrogenous substrates.
The
effects of methyl fluoride and acetylene on 14CO oxidation
by DMC O horizon soils were assayed by adding inhibitors individually to jar headspaces at a final concentration of 1%. The incubation times
for the first trial were short (about 30 min). In a second trial
acetylene was added at a concentration of 1%, and oxidation was
monitored for an extended period (24 h). Headspace
14CO2 concentrations were determined at
intervals by performing a radioassay as described above. Methyl
fluoride and acetylene inhibit both ammonia oxidizers and methanotrophs
at the concentration used (27).
The effects of ammonium and nitrite were assayed after 1 µmol of N g
(fresh weight)
1 was added to soil samples in
110-cm
3 jars (10 and 2.5 g [fresh weight] for the
ammonium and nitrite
assays, respectively). Ammonium was added as a
chloride salt,
while nitrite was added as a sodium salt; in both cases
100 µl
g (fresh weight) of soil
1 was added. The jars
were sealed after the soil was mixed and
the salts were added gently.
For assays involving ammonium,
14CO was added to jar
headspaces and time courses of
14CO
2 production
were determined as described previously. Effects
of ammonium were also
determined by monitoring the headspace concentrations
of stable CO in a
separate
experiment.
The responses to nitrite were determined by using time courses of
stable CO alone. CO oxidation in jars that were sealed immediately
after nitrite was added was monitored, and soils were also incubated
in
jars for 1 h without stoppers after nitrite was added to allow
gas
exchange between the soils and the ambient laboratory atmosphere.
Subsequently, the jars were sealed and the rates of CO oxidation
were
determined as described above. Two sets of triplicate soils
were used
for the nitrite amendment experiments and for unamended
controls. Rates
of CO oxidation were determined for both sets
before nitrite was added
as well as after nitrite was
added.
CO analysis.
The samples for CO analysis were routinely
assayed by using a reduced gas detector (model RGA3; Trace Analytical).
The detection limit for CO was <5 ppb with precision of 1% or better.
Signals were detected and analyzed by using MacIntegrator software and acquisition hardware operating at 18 MHz. The instrument response was
standardized by using a National Oceanic and Atmospheric
Administration-CMDL primary certified standard (91.9 ppb) and secondary
standards (267.6 ppb; Maine Oxy, Inc.). Headspace samples and other
samples were assayed immediately after they were collected. The
incubation times used for the various assays described above were too
short for interference from CO off-gassing by stoppers, syringes, or incubation vessels.
During assays involving nitrite addition, an unexpected peak appeared
immediately after the typical hydrogen and CO peaks.
Although it has
not been reported previously that the reduced
gas detector can detect
nitric oxide (NO), the unknown peak was
identified as NO based on the
following observations: (i) no response
was detected for nitrous oxide
at percent concentrations; (ii)
the unknown peak appeared only after
nitrite was added to soils,
not after nitrate or ammonium was added,
and the rate of appearance
was rapid; (iii) the peak was produced with
both autoclaved and
fresh soils; (iv) the peak was produced immediately
after nitrite
was mixed with acidic ferrous sulfate under anoxic
conditions
(this system is known to produce NO but not
NO
2); and (v) an identical
retention time and identical
peak symmetry were observed for a
1-ppm NO standard (Scott-Marin,
Inc.). The lower limit for detection
of NO with the CO analyzer was
about 1 ppm; the maximum values
observed during incubation of soil with
nitrite were approximately
10
ppm.
 |
RESULTS |
Depth profiles.
14CO was oxidized rapidly at all
depths in DMC forest soils (Fig. 1).
14CO2 was the primary product of
14CO consumption, accounting for approximately 90% of the
radiolabel added. The remainder of the 14CO2
was apparently incorporated into biomass since additional 14CO2 did not accumulate during extended
incubation or after stable CO was added. 14CO2
accumulation from 14CO fit a simple exponential pattern
(e.g., 1
e
kt, where k is a first-order
rate constant and t is time) from which 14CO
oxidation rate constants were estimated by linear regression analysis.
The oxidation rate constants were greatest in the upper 4 cm (O
horizon) of a soil profile and decreased approximately twofold with
depth in the A horizon (Fig. 2). In
contrast, the methane consumption rate constants were negligible in the
O horizon, reached a maximum in the uppermost A horizon, and then
decreased with depth (Fig. 2). At all depths, the methane uptake rate
constants were considerably lower than the 14CO oxidation
rate constants.

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FIG. 1.
Time course of 14CO2 production
from 14CO in sealed jars containing 10 g (fresh
weight) of soil from depths of 0 to 2 cm ( ), 2 to 4 cm ( ), 4 to 6 cm ( ), and 6 to 8 cm ( ). The soil core used was obtained from the
DMC forest. See Fig. 7 through 9 for untransformed time courses.
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FIG. 2.
Depth profiles for 14CO oxidation ( ) and
atmospheric methane consumption ( ) rate constants in DMC forest
soils. All rate constants are means based on triplicate determinations;
the error bars indicate ±1 standard error.
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The depth profiles obtained for CO in pine forest and cultivated soils
(Fig.
3) revealed patterns which were
consistent with
net atmospheric CO oxidation and production,
respectively. In
the cultivated soil, CO was depleted rapidly in the
upper 1 cm
of the horizon, and the minimum value at a depth of 3 cm was
approximately
fivefold less than ambient atmospheric values. In the
pine forest
soil, the CO concentrations remained elevated and greater
than
the atmospheric levels through the O horizon but declined to
values
less than the atmospheric values in the A horizon. Chamber-based
measurements of CO exchange across the soil surfaces (data not
shown)
yielded rates of 3.1 and

3.6 mg of CO m
2
day
1 for the cultivated and pine sites, respectively;
these values
are consistent with the depth profiles. The profiles at
both sites
were not affected by a 30-min period of darkening.

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FIG. 3.
Depth profiles for CO concentrations in the atmospheres
of a cultivated soil (A) and a pine forest soil (B) with ambient
illumination ( ) and after 30 min of shading (photosynthetically
active radiation, <20 microeinsteins) ( ). The results are
means ± standard errors based on triplicate determinations.
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CO oxidation kinetics.
The CO oxidation rates for DMC O
horizon forest soils at headspace concentrations ranging from 0.2 to 25 ppm conformed to a Michaelis-Menten kinetic model (Fig.
4). The apparent
Km, 16.9 ± 1.7 ppm (18 nM), as well above
atmospheric levels (0.1 to 0.3 ppm). The threshold values for CO
consumption appeared to be near zero and were apparently determined
primarily by rates of abiological CO production. The estimated
Vmax, 6.9 ± 0.4 µg g (fresh
weight)
1 h
1, was more than 50-fold higher
than the rates observed with ambient CO levels.

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FIG. 4.
CO oxidation by O horizon soils as a function of initial
headspace CO concentration. Different symbols indicate the results
obtained for different replicates. gfw, gram (fresh weight).
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Responses to water content.
The rate of CO oxidation by DMC O
horizon forest soils was optimum at moisture contents of about 30 to
60% (Fig. 5A). As the water content
decreased, the oxidation rate decreased sharply, and there was a shift
to CO production at water contents of <20%. Recovery from extended or
severe drying exhibited a hysteresis with CO production over a water
content range from 20 to 80%. In contrast, no hysteresis was observed
for more limited drying-wetting cycles (Fig. 5B) that were typical of
the conditions in situ. The responses of A horizon soils were similar,
but the oxidation rates were lower at all of the water contents
examined (data not shown).

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FIG. 5.
Response of O horizon soils to changing water content.
(A) Results obtained after extended drying ( ) and then rewetting
( ). (B) Results obtained for drying ( ) and rewetting ( ) cycles
with typical seasonal ranges for water content. gfw, gram (fresh
weight).
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Response to temperature.
The net CO oxidation rates (gross
oxidation minus CO production) in DMC O horizon soils (depth, 0 to 4 cm) increased about twofold as the temperature increased from 0 to
20°C; the rates decreased at higher temperatures, and net CO
production occurred at >35°C (Fig.
6A). Gross CO oxidation (corrected for CO
production) exhibited a stronger temperature response, and there was a
broad optimum at 20 to 30°C. The activation energies (0 to 26°C)
for gross and net CO oxidation were
31.8 and
33.2 kJ
mol
1 K
1, respectively. The response of A
horizon soils (6 to 10 cm) was more muted, and there was little change
in gross or net CO oxidation at temperatures between 5 and 30°C (Fig.
6B). Net CO production occurred at temperatures above 35°C. The net
and gross CO oxidation rates for A horizon soils were substantially
less than the values for O horizon soils at all temperatures. In
contrast, CO was produced in microwaved O and A horizon soils at all
temperatures, and production was markedly greater in O soils (Fig.
7). In both cases there was little
response to temperatures between 0 and 15°C, and there was an abrupt
increase in production at temperatures between 15 and 40°C. The
activation energies (15 to 40°C) for O and A horizon CO production
were
62.3 and
82.3 kJ mol
1 K
1,
respectively.

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FIG. 6.
(A) Temperature response of O horizon soils. (B)
Temperature response of A horizon soils. Symbols: , net CO
consumption; , gross CO consumption. The net consumption values are
means ± standard errors based on triplicate determinations. gfw,
gram (fresh weight).
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FIG. 7.
(A) Abiological CO production as a function of
temperature in O horizon soils. (B) Abiological CO production as a
function of temperature in A horizon soils. The results are means ± standard errors based on triplicate determinations. gfw, gram (fresh
weight).
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C2H2 and methyl fluoride inhibition.
Methyl fluoride (headspace concentration, 1%) did not inhibit
14CO oxidation by DMC O horizon soils during short
incubations (<20 min) (Fig. 8). In
contrast, the inhibition by 1% acetylene was substantial (>90%)
(Fig. 8 and 9A). However, during longer
incubations (>1.5 h), acetylene inhibition was markedly diminished,
even though the acetylene concentrations remained high. After 24 h, apparent inhibition by acetylene had decreased to 36%.

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FIG. 8.
Effect of 1% methyl fluoride ( ) or acetylene ( )
on CO consumption by DMC O horizon forest soils. , controls. The
results are means ± standard errors based on triplicate
determinations. gfw, gram (fresh weight).
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FIG. 9.
(A) Short-term inhibition of CO consumption by 1%
acetylene. (B) Long-term partial recovery from inhibition. Symbols:
, preparations containing 1% acetylene; , controls. The results
are means ± standard errors based on triplicate determinations.
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Ammonium and nitrite inhibition.
14CO oxidation by
DMC O and A horizon soils was not sensitive to the addition of ammonium
(Fig. 10). The rates of oxidation were greater for O horizon soils than for A horizon soils, as observed previously (Fig. 2). In contrast, CO oxidation was rapidly and strongly
but reversibly inhibited by nitrite (Fig.
11A). Addition of nitrite appeared to
result in rapid presumably abiological production of NO (see above). As
headspace NO concentrations decreased, inhibition was reversed, and the
levels of activity in nitrite-treated soils were comparable to the
levels in unamended controls (Fig. 11A). In addition, the rates of CO
oxidation in soils that were continuously vented for 1 h after
nitrite was added were equivalent to the rates of controls (Fig. 11B).
Venting for 1 h after nitrite was added reduced the levels of NO
to levels that were not detectable with the CO analyzer (<1 ppm).
Nitrous oxide added at a headspace concentration of 1% had no effect
(data not shown).

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FIG. 10.
Effect of ammonium on CO consumption by O horizon soils
(depth, 0 to 2 cm) and A horizon soils (depth, 6 to 8 cm). Open
symbols, controls; solid symbols, preparations containing ammonium. The
results are means ± standard errors based on triplicate
determinations.
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FIG. 11.
(A) CO consumption by unamended organic layer soils
( ) and soils treated with nitrite (1 µmol g [fresh
weight] 1) ( ). , relative NO concentrations. (B) CO
consumption by organic layer soils before and after treatment with
nitrite. The soils were treated as described above, except that they
were vented to eliminate accumulation of NO. Open bars, nitrite-treated
soils; solid bars, controls. The results are means ± standard
errors based on triplicate determinations. gfw, gram (fresh weight).
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DISCUSSION |
Atmospheric CO oxidation by soils occurs in a wide variety of
systems and has been considered an important component of the global
atmospheric CO budget (2, 11, 16). Nonetheless, control of
CO oxidation has been addressed in relatively few studies. In a model
analysis of global soil CO oxidation, Potter et al. (40)
pointed out the need for additional information for a number of key
parameters, including the depth distribution of activity and responses
to water content and temperature. The need for such information is
illustrated by the substantial discrepancy between the model
predictions for global soil CO oxidation (15 to 50 Tg of CO
year
1) (40) and widely cited extrapolations
obtained from a small number of field studies (190 to 630 Tg
year
1) (2, 16).
Results presented here indicate that atmospheric CO oxidation in Maine
forest soils occurs primarily in the O horizon (Fig. 2, 6, and 10),
where the availability of organic matter, the rates of abiological CO
production (Fig. 7), and the levels of atmospheric CO are maximal.
Organic matter may be particularly important since many CO-oxidizing
bacteria can use a wide variety of organic substrates as sole carbon
and energy sources (22, 25, 36, 37) and do not depend on low
levels of CO alone. Moxley and Smith (39) have described a
positive relationship between in vitro CO oxidation rates and organic
matter concentrations ranging from about 1 to 7% for a variety of
soils. A significant although reduced potential for oxidation also
occurs in the underlying mineral or A horizon. However, under in situ
conditions CO diffusing from the atmosphere would be largely depleted
before it reached this layer. Nonetheless, populations of A horizon CO
oxidizers may be maintained by a combination of subsurface CO
production, which appears to occur at modest rates even at relatively
low temperatures (Fig. 7B), and supplies of organic substrates.
In contrast, atmospheric methane consumption in Maine forest soils
occurs almost exclusively in the A horizon at depths significantly removed from the surface (Fig. 2) (1). Organic matter
probably plays only a minor role as a determinant of atmospheric
methane consumption, since most methanotrophs use only methane or
perhaps methane and methanol as carbon sources (5, 8, 11). A
number of parameters have been proposed as factors that affect methane consumption; these parameters include ammonium, water potential, and pH
(9, 11, 23, 28). Apparently none of them is a major factor
that affects CO oxidation.
The 14CO oxidation rate constants for Maine forest soils
significantly exceed the rate constants for atmospheric methane
consumption (Fig. 2). This also appears to be the case for global
estimates of soil CO oxidation (about 6.8 to 22.7 Tmol
year
1) and methane consumption (about 3.1 Tmol
year
1), although the former is more uncertain than the
latter (29). The CO and methane oxidation rate constants
reported here differ substantially more than the global rate estimates
differ. However, the 14CO oxidation rate constants
determined in this study and elsewhere (19) estimate only
gross levels of CO oxidation and do not account for in situ CO
production. The latter can markedly reduce gross rates relative to net
rates, which are included in global estimates.
In accord with the data obtained for Maine forest soils, the CO depth
profiles obtained for cultivated Georgia soils indicated that
atmospheric CO oxidation occurs primarily in the surface layers. The
profiles obtained for a pine forest soil differed significantly and
revealed that net CO emission occurs due to CO production in the O
horizon. Profiles whose resolutions are similar have not been described
previously, but it is evident that for both CO production and CO
consumption, only a few centimeters of soil include the relevant zones
of activity. A more detailed understanding of these zones could improve
the utility of modeling approaches for estimating global soil CO
budgets and help to resolve discrepancies between data obtained with
models and empirical data (40, 44).
Abiological CO production, which probably accounts for the pine forest
CO profiles, is a well-known phenomenon that occurs in litter and
organic and mineral soils (13, 14, 39, 44) (Fig. 7). This
production has been attributed in part to photochemical organic matter
oxidation (12). However, profiles obtained under light and
dark conditions for both pine forest and cultivated soils suggest that
other processes may be more important (see below). Regardless, pine
forest CO profiles and flux measurements indicate that temperate
forests may occasionally emit CO. Similar results have been obtained
during extended seasonal observations of the site used, as well as the
Maine forest site (data not shown). In contrast, previous reports based
on European forest data have emphasized net CO oxidation (12, 38,
44). While the reasons for the geographic differences are not
known, the results suggest that previous global extrapolations based on
European forest data may have overestimated CO oxidation.
Apparent Km values for Maine forest soil CO
oxidation (16.9 ± 1.7 ppm) are consistent with values obtained
for other systems (15, 19), which range from 5 to 51 ppm.
Similar values have been reported for atmospheric methane consumption
(6, 8, 11, 17). Previously published
Vmax values for CO oxidation (0.2 to 10 µg g
[dry weight]
1 h
1 are somewhat less than
the Vmax value for the Maine soil (11.1 ± 0.6 µg g [dry weight]
1 h
1), but the
database is insufficient to support generalizations at this point.
Although the Vmax for Maine forest soil CO
oxidation greatly exceeds (by >100-fold) the
Vmax for methane consumption (about 10 to 20 ng
g [dry weight]
1 h
1) (8), the
net in situ CO oxidation rates (maximum, 6 mg of CO m
2
day
1) (29a) exceed the net in situ rates of
methane consumption (1 to 3 mg of methane m
2
day
1) (29a) by only severalfold. Moreover,
lower incorporation efficiencies for CO than for methane (about 10 and
40%, respectively) (45) result in comparable assimilation
rates on a moles-of-carbon basis. When all of the rates are expressed
in molar units, the discrepancy between the in situ uptake and
Vmax values for the two processes can be
accounted for in large part by higher methane concentrations (1.8 versus ~0.2 ppm). CO production in soils also contributes to a lower
rate of consumption of CO from the atmosphere. The substantially higher
Vmax for CO oxidation than for methane
consumption despite comparable levels of carbon assimilation implies
that CO oxidizers depend on substrates other than CO for some fraction or even a large fraction of their biomass, as discussed above.
Soil water content plays similar regulatory roles for CO oxidation and
methane consumption, although the two processes occur in different
horizons (Fig. 2). Water contents greater than the optimum water
contents (30 to 60%) (Fig. 5) result in reversible declines in
activity due to decreases in gas transport. At water contents ranging
from about 30 to >120%, CO oxidizers do not appear to be affected by
water stress or low rates of gas exchange. However, water stress
appears to contribute to a hysteresis when the water content is
increased to optimal values after it has been at relatively low values
(Fig. 5). This hysteresis is qualitatively similar to (if less dramatic
than) the hysteresis observed for methane consumption (46).
These results suggest that soils exhibit a variety of responses to
changing water regimes, but with substantial drying or increased
precipitation the rates of net CO oxidation most likely decrease.
The temperature responses of CO dynamics are also complex, involving
both biological oxidation and abiological production (Fig. 6 and 7)
(14). In accord with previous reports (14), in
this study the CO oxidation rates (gross and net) increased modestly at
temperatures between 0 and 30°C in O horizon soils and increased less
in the A horizon soils (Fig. 6). The lower oxidation rates at all
temperatures in the A horizon soils are consistent with the
14CO oxidation depth profiles (Fig. 2), indicating that the
O horizon is the dominant site of activity in situ. At temperatures
greater than 30°C, abiological CO production became increasingly
important, and net CO emission dominated activity at temperatures above
35°C in both O and A horizon soils. The substantially greater CO
production in O horizon soils undoubtedly reflected the higher organic
matter concentrations. However, the comparable activation energies in the two horizons indicate that the impact of any differences in organic
matter quality may be small. Although the role of organic matter in CO
production has received some attention (13, 14), additional
studies of the qualitative and quantitative roles of specific organic
matter fractions (e.g., polysaccharides, proteins, humic compounds)
would be useful for developing more refined predictive models for net
global CO emission. Nonetheless, the limited temperature sensitivity of
both CO oxidation and CO production suggests that with the exception of
changes in seasonal extremes, predicted future warming is likely to
have only minimal direct effects on the activity in temperate soils. Of
course, the coupling between temperature and hydrologic regimes could
lead to significant but unpredictable changes.
While the microbes responsible for DMC forest soil CO exchange remain
largely unknown (3, 4), several lines of evidence have
eliminated the possibility that either methanotrophs or ammonia oxidizers play a significant role; each of these groups can oxidize CO
and have been implicated in cultivated soils (5, 7, 24). First, methyl fluoride and acetylene inhibit members of both groups, but methyl fluoride has no effect on 14CO oxidation in
soils that exhibit limited (O horizon) or significant (A horizon)
methanotrophic activity (Fig. 8). Second, acetylene strongly inhibits
14CO oxidation (Fig. 9A), but it does so only temporarily,
a pattern not consistent with activity of either methanotrophs or
ammonia oxidizers. A similar response to acetylene has been observed
for CO oxidation by bacteria associated with aquatic plant roots
(41), but the reversal of acetylene inhibition remains
unexplained. Third, the maximum rates of CO oxidation occur in O
horizon soils, where methanotrophic activity is minimal (Fig. 2).
Finally, substantially greater Vmax values for
CO oxidation than for methane consumption (see above) are inconsistent
with methanotrophic CO oxidation.
On the basis of pure-culture kinetics, especially high apparent
Km values, Conrad et al. (15) argued
that known carboxydotrophs cannot account for activity in situ. While
the arguments of these authors have merit, recent observations of
methanotrophs have suggested that behavior determined under typical
laboratory culture conditions does not reliably predict capabilities
under in situ conditions (8). In particular, the apparent
Km of methanotrophs decreases during
substrate-limited growth (8, 20). Carboxydotrophs may behave
similarly. In addition, ongoing studies suggest that a
carboxydotrophlike activity can be enriched in forest soils with
moderately elevated CO concentrations (29a). However, since Bartholomew and Alexander (3) have also implicated several actinomycetes in CO oxidation, it is evident that in situ activity may
involve a relatively diverse assemblage of microbes and not a single,
highly defined functional group, as is typically the case for methane consumption.
The responses to ammonium (Fig. 10) and nitrite (Fig. 11) also suggest
that methanotrophs do not actively oxidize CO in Maine forest soils.
Both of these substrates strongly inhibit methane consumption (10,
23, 31-33, 49), but they have no effect (ammonium) or only a
temporary effect (nitrite) on CO oxidation. The absence of short-term
ammonium inhibition indicates that CO oxidation may be much less
sensitive to nitrogen eutrophication and disturbances in nitrogen
cycling than methane consumption is. Indeed, agricultural land use may
even stimulate CO oxidation in some instances (42, 43), in
marked contrast to the almost universally observed inhibition of
methane consumption under these conditions (11, 26, 28, 48).
Although nitrite is far less important ecologically than ammonium, the
responses to nitrite are nonetheless intriguing. The results described
here suggest that nitrite itself is not inhibitory (Fig. 11B). Instead,
short-term nitrite inhibition appears to result from the formation and
temporary accumulation of NO (Fig. 11A). Once NO is oxidized or
otherwise depleted, CO oxidation resumes. These observations indicate
that NO and CO dynamics may be linked in soils, perhaps through
oxidation by the same organisms, through mutual inhibition of
oxidation, or through another as-yet-unknown mechanism. Since soils
play important roles in the global budgets of both NO and CO (2,
29, 52) and since CO chemistry and NO chemistry are linked to
tropospheric ozone formation (51), interactions between CO
metabolism and NO metabolism should be emphasized in future research efforts.
 |
ACKNOWLEDGMENTS |
This work was supported in part by NSF grant DEB-9728363.
I thank K. Hardy for excellent technical support in the lab and field
and K. Ingram and G. Grenade for access to and assistance with field
sites in Griffin, Ga.
 |
FOOTNOTES |
*
Mailing address: Darling Marine Center, University of
Maine, Walpole, ME 04573. Phone: (207) 563-3146, ext. 207. Fax: (207) 563-3119. E-mail: gking{at}maine.edu.
Contribution 343 from the Darling Marine Center.
 |
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