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Applied and Environmental Microbiology, February 1999, p. 787-794, Vol. 65, No. 2
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
High-Level Formation of Active Pseudomonas cepacia
Lipase after Heterologous Expression of the Encoding Gene and Its
Modified Chaperone in Escherichia coli and Rapid In
Vitro Refolding
Dinh Thi
Quyen,
Claudia
Schmidt-Dannert, and
Rolf D.
Schmid*
Institut für Technische Biochemie,
Universität Stuttgart, Stuttgart, Germany
Received 11 September 1998/Accepted 23 November 1998
 |
ABSTRACT |
The lipase from Pseudomonas cepacia ATCC 21808 (recently reclassified as Burkholderia cepacia) is widely
used by organic chemists for enantioselective synthesis and is
manufactured from recombinant P. cepacia harboring
on a plasmid the clustered genes for lipase and its chaperone. High
levels of expression of inactive lipase (40%) in Escherichia
coli were achieved with pCYTEXP1 under the control of the
strong, temperature-inducible
PRL promoter. However, no
overexpression of the lipase chaperone was achieved in E. coli. Thus, chemical refolding of inactive lipase in the absence
of its chaperone yielded only 25 U/mg, compared to 3,470 U of the purified lipase secreted by recombinant P. cepacia per mg.
Sequence analysis of the chaperone revealed a high GC content (>90%)
in the 5' region of the gene and the presence of a putative membrane anchor at the N terminus. Hence, the 5' region of the gene was replaced
by a synthetic fragment, and the putative membrane anchor was removed
by deletion of the first 34 or 70 N-terminal amino acids. Only
truncation of the gene led to overexpression of the chaperone (up to
60%) in E. coli. With this chaperone, it was possible to
obtain for the first time in a simple refolding procedure a highly
active Pseudomonas lipase (classes I and II) expressed in
E. coli with a specific activity of up to 4,850 U/mg and a yield of 314,000 U/g of E. coli wet cells.
 |
INTRODUCTION |
Lipases (triacylglycerol
acylhydrolases; EC 3.1.1.3), particularly microbial lipases, have been
widely used in the hydrolysis and transesterification of triglycerides
and in the enantioselective synthesis and hydrolysis of a variety of
esters (27, 39).
In recent years, many microbial lipase genes have been isolated,
sequenced, modified, and expressed in homologous or heterologous hosts,
such as Escherichia coli, filamentous fungi, or yeasts (3, 5, 17, 34, 37). Lipases from Pseudomonas
alcaligenes (2, 25) are extensively used as an additive
in laundry detergents, and lipases from Pseudomonas species
are widely used as catalysts in organic synthesis (12, 36).
In addition, these various Pseudomonas lipase preparations
are commercially available (e.g., Amano YS, P, and AH; Fluka SAM-II).
Among these, P. cepacia lipase preparations are the
most predominant and have often been used by organic chemists for
enantioselective synthesis (33).
In recent years, the cloning, sequencing, and expression of a variety
of Pseudomonas lipase genes have been reported (10, 15,
18, 22, 24, 30, 39). The genes can be divided into three homology
groups (assigned as classes I to III), where class III is only
distantly related to the other classes. Pseudomonas lipases
of classes I and II, including the broadly used lipases of
P. cepacia and P. glumae strains (class
II) as well as of P. aeruginosa strains (class I), need
a chaperone whose gene is located downstream of the lipase
gene for efficient secretion and folding of active lipase.
The deduced amino acid sequences of the chaperones belong to two
homology groups. For a detailed review of the biochemical and molecular
properties of Pseudomonas lipases, see references 12, 23, and 36.
The production of Pseudomonas lipases is currently carried
out with recombinant Pseudomonas strains harboring both the
lipase and its chaperone on a broad-host-range plasmid. With this
system, lipase production is increased 40- to 85-fold over that of the wild-type strain (16, 30). For recombinant P. cepacia ATCC 21808 (recently reclassified as Burkholderia
cepacia) harboring the large pMMB22-derived plasmid pHES12, only
moderate lipase productivity of 200 U/ml is obtained (15,
16). Moreover, lipase production by recombinant strains often
decreases over time, possibly because of the large size of the
plasmids. In addition, most Pseudomonas strains currently
used for lipase production are potential pathogens; thus, special
safety directions have to be considered. For these reasons and to
further increase lipase productivity, we aimed to develop a
heterologous E. coli expression system for the large-scale production of these important lipases.
Unfortunately, the expression of class I and II Pseudomonas
lipases in E. coli is hampered by the fact that a lipase
chaperone is necessary for effective folding of the lipase. To our
knowledge, high-level production of functional class I and II
Pseudomonas lipases in E. coli has not yet been achieved.
In this work, we report for the first time the overexpression of both
the lipase and its modified and truncated chaperone of P. cepacia ATCC 21808 in E. coli. In a simple and rapid in vitro refolding procedure, functionally active lipase can be obtained in large amounts and with a specific activity comparable to that of the
lipase purified from P. cepacia.
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MATERIALS AND METHODS |
Materials.
Restriction enzymes, DNA-modifying enzymes, T4
DNA ligase, and Taq polymerase were from MBI Fermentas. The
Taq Dye Deoxy cycle sequencing kit was from Applied Biosystems. The DNA
gel extraction kit, Midi plasmid kit, Prep-spin plasmid kit, and
Ni-nitrilotriacetic acid (NTA) matrix were from Qiagen.
p-Nitrophenyl-palmitate (pNPP) was from Sigma. Peptone and
yeast extract were from Difco. All reagents were of analytical grade
unless otherwise stated.
Strains, plasmids, and media.
P. cepacia ATCC
21808 harboring plasmid pHES12 containing the lipase operon was kindly
provided by Boehringer Mannheim GmbH (15). E. coli BL321 (hsdS gal [
cIts857
ind1 Dam7 nin5 lacUV5-T7 gene 1]) and E. coli DH5
(supE44
lacU169 [
80lacZ
M15] hsdR17 recA1 endA1
gyrA96 thi-1 relA1) were used for cloning and gene expression.
Plasmid pCYTEXP1 (4), providing ampicillin resistance,
was used for the construction of different expression vectors in E. coli. Plasmid pET20b(+) (Novagen) was used for subcloning.
E. coli was grown at 37°C in Luria-Bertani medium (LB)
supplemented with 100 µg of ampicillin per ml for selection of
transformants.
Gene expression.
Transformed E. coli BL321
(or E. coli DH5
for expression of truncated and
modified chaperone genes) with plasmids derived from
pCYTEXP1 containing the strong, temperature-inducible
PRL promoter was cultivated at 30°C until the optical
density at 578 nm was 0.8. Next, protein expression was induced by
shifting the cultivation temperature to 42°C. After 3 h of
induction, cells were harvested by centrifugation (10,000 × g, 10 min, 4°C).
Recombinant DNA techniques.
Standard recombinant DNA methods
were carried out as described by Sambrook et al. (32). The
fluorescence-based dideoxy DNA cycle sequencing method was used for
sequence determination. DNA sequencing was carried out with the Taq Dye
Deoxy cycle sequencing kit and with a model 373A DNA sequencing system
(Applied Biosystems) in accordance with the manufacturer's
instructions. For PCR, DNA was amplified with the following cycle
conditions: first step, 94°C for 4 min, 1 cycle; second step, 94°C
for 1.5 min, 64°C for 2 min, and 72°C for 3 min, 25 cycles; and
third step, 72°C for 4 min, with 8% dimethyl sulfoxide added to the
PCR mixture.
Isolation of lipase inclusion bodies.
E. coli cells
from a 500-ml culture (2 g) were suspended in 25 ml of 50 mM Tris
buffer (pH 8.0) containing 1 mM EDTA and disrupted by sonification with
a Branson Sonifier W-250 (duty cycle, 35%; output control, 3; time, 7 min), and the pellet containing the insoluble inclusion bodies was
washed several times with the same buffer. The inclusion bodies were
dissolved in 20 ml of buffer B (10 mM Tris-HCl, 8 M urea, 0.1 M sodium
phosphate [pH 8.0]) at room temperature for 1 h with mild
stirring. Following centrifugation (10,000 × g, 15 min, 4°C), the solubilized and denatured lipase of the supernatant
was subjected to refolding.
Purification of the lipase chaperone by Ni-NTA chromatography.
E. coli cells from a 500-ml culture (2 g) were suspended in
20 ml of buffer A (10 mM Tris-HCl, 6 M guanidine-HCl, 0.1 M sodium phosphate [pH 8.0]) and lysed for 1 h at room temperature.
Following centrifugation (10,000 × g, 15 min, 4°C),
the supernatant was applied (0.2 ml/min) to an Ni-NTA column (1.6 by 5 cm) previously equilibrated with buffer. Unbound protein was eluted by
washing the column with 10 volumes of buffer A, 5 volumes of buffer B, and 5 volumes of buffer C (10 mM Tris-HCl, 8 M urea, 0.1 M sodium phosphate [pH 6.3]). Finally, bound chaperone was eluted with buffer
D (10 mM Tris-HCl, 8 M urea, 0.1 M sodium phosphate [pH 5.9]). The
purity of the eluted chaperone was analyzed by sodium dodecyl sulfate
(SDS)-polyacrylamide gel electrophoresis (PAGE).
Refolding of lipase in the presence of the chaperone.
One
hundred microliters of lipase solution obtained after inclusion body
solubilization and containing 1 mg of denatured lipase was
refolded in 100 ml of distilled water in the presence of different amounts of denatured (solubilized with 8 M urea) or native (not solubilized with urea) chaperone. After 24 h of refolding at
4°C, the lipase activity in the supernatant was determined with
pNPP as the substrate.
In order to investigate the optimal ratio of lipase to chaperone, 0.1, 0.5, 1, and 3 mg (10 to 300 µl) of denatured and purified
chaperones

70HpHis and ompA

70HpHis obtained after Ni-NTA chromatography
were
used for the refolding of 1 mg of lipase as described
above.
For simplified refolding,
E. coli cells from a 500-ml
culture (2 g of cells) expressing a truncated chaperone
(

70HpHis, ompA

70HpHis,

34HpHis, or

34HpHis/ompA

34HpHis)
were lysed in 20 ml of buffer
B. After centrifugation (10,000 ×
g, 15 min, 4°C), the supernatant
containing the denatured
(solubilized with 8 M urea) chaperone
was used for in vitro refolding.
The amount of the chaperone in
relation to the total protein in the
supernatant was estimated
by SDS-PAGE analysis. Approximately 1 mg of
chaperone was used
for the in vitro refolding of 1 mg of lipase as
described for
the purified chaperone. In a similar way, native (not
solubilized
with urea) chaperones (

70HpHis, ompA

70HpHis, and

34HpHis) were
used for refolding. Instead of cell lysis in the
presence of urea,
cells from a 500-ml culture were suspended in 25 ml
of 50 mM Tris
buffer (pH 8.0) containing 1 mM EDTA and disrupted by
sonification
with a Branson Sonifier W-250 (duty cycle, 35%; output
control,
3; time, 7 min). After centrifugation (10,000 ×
g, 15 min, 4°C),
the supernatant containing the soluble
chaperone was used for
refolding.
Analytical methods.
Preparative gel electrophoresis was
carried out with a 12.5% polyacrylamide gel as described by Laemmli
(28), and proteins were stained with Coomassie brilliant
blue R-250. The expression level was estimated as a percentage of the
level of total cellular protein with Imagemaster VDS version 2.0 (Pharmacia).
For amino-terminal sequence analysis, purified proteins were subjected
to SDS gel electrophoresis. After blotting, the polyvinylidene
difluoride membrane was stained with Coomassie brilliant blue
R-250,
and the protein bands were cut out and used for amino-terminal
sequence
analysis. Amino-terminal sequence analysis was performed
with a model
470A gas-phase sequencer (Applied Biosystems) in
accordance with the
manufacturer's
instructions.
Protein concentration was determined with the bicinchoninic acid
protein assay kit by the enhanced method in accordance with
the
manufacturer's instructions (Pierce instructions 23220/23225)
and with
bovine serum albumin as the
standard.
Enzyme assay.
The enzyme assay was performed with pNPP as
the substrate by use of a Biochrom 4060 spectrophotometer (Pharmacia).
Cleavage of pNPP was measured at 60°C with 0.1 M Tris buffer (pH 7.5)
as described by Schmidt-Dannert et al. (35). One unit was
defined as the amount of enzyme which caused the release of 1 µmol of p-nitrophenol per minute under the test conditions.
 |
RESULTS |
Construction of plasmids.
For the initial investigation of
protein expression in E. coli, a 2,673-bp fragment
containing the genes for the prelipase and the chaperone was cut from
pHES12 with EcoRI and ligated into pCYTEXP1 linearized
with the same enzyme, yielding pT-E(preLip-Hp) (Fig.
1).

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FIG. 1.
Construction of different expression vectors derived
from plasmids pHES12 and pCYTEXP1. The inserts and restriction
sites used for cloning are given. (A) P. cepacia
expression vector (pHES12) containing the complete lipase operon
(lipase and chaperone) under the control of the tac
promoter. (B) E. coli expression vector (pCYTEXP1)
containing the strong, temperature-inducible PRL
promoter. ORI, origin. (C) Inserts of pCYTEXP1-derived expression
vectors. N, NdeI; E, EcoRI. Numbers in
parentheses are base pairs. See Table 1, footnote a, for
explanations of designations.
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|
In order to place the lipase operon (preLip-Hp) at an optimal distance
from the

P
RL promoter of pCYTEXP1, PCR was performed
with pT-E(preLip-Hp) as a template and two oligonucleotides
introducing
an
NdeI site (including the ATG start codon) at
the 5' end of
the prelipase gene and an
EcoRI site at the 3'
end of the chaperone
gene. After digestion of the resulting PCR
fragment (containing
preLip-Hp) and pCYTEXP1 with
NdeI and
EcoRI and subsequent ligation
of the
products, expression vector pT-preLip-Hp was obtained (Fig.
1).
In two additional pCYTEXP1-derived expression plasmids containing
complete preLip-Hp, the original signal equence of the lipase
gene was
removed, resulting in vector pT-Lip-Hp, and replaced
by the
ompA signal sequence, yielding plasmid pT-ompALip-Hp.
pT-ompALip-Hp
was obtained by amplifying the
ompA
signal sequence of expression
plasmid pT-ompABTL2
(
34) with two oligonucleotides: the first
complementary to
the 5' end of the
ompA sequence and introducing
an
NdeI site and the second complementary to the 3' end of the
ompA sequence and to the 5' end of the mature lipase gene.
The
PCR fragment thus obtained and an oligonucleotide complementary
to
an
SphI site inside the lipase gene served as primers for a
second PCR with pT-preLip-Hp as a template. Digestion of both
the
obtained PCR fragment and pT-preLip-Hp with
NdeI and
SphI,
followed by ligation, resulted in
pT-ompALip-Hp. pT-Lip-Hp was
constructed by PCR with
pT-preLip-Hp as a template and with one
primer complementary to
the 5' end of the mature lipase gene and
introducing an
NdeI
site (including the ATG start codon) and another
primer complementary
to the 3' end of the chaperone gene and introducing
an
EcoRI
site. Digestion of both pT-preLip-Hp and the obtained
PCR
fragment with
EcoRI and
NdeI, followed by
ligation, yielded
pT-Lip-Hp (Fig.
1).
To fuse a six-histidine (His
6) tag to the mature lipase
gene and the chaperone gene, both genes were subcloned in
plasmid
pET20b(+) harboring a His
6 tag (data not
shown). The tagged genes
were transferred to pCYTEXP1 for
expression under the control
of the

P
RL promoter by
amplification with oligonucleotides introducing
NdeI
and
EcoRI sites at the 5' and 3' ends, respectively. Cloning
of these PCR fragments into pCYTEXP1 also linearized with
NdeI
and
EcoRI resulted in pT-HpHis and
pT-LipHis,
respectively.
A modified chaperone gene (
modHp) was constructed as
follows: the first 242 bp (ending at a
SacII site) of the
gene were replaced
by a codon-optimized (for
E. coli) and
thus less GC-rich nucleotide
sequence. To this end, four
oligonucleotides of 80 bp each and
overlapping by approximately 15 bp
were synthesized and assembled
by PCR. The terminal oligonucleotides
comprised an
NdeI site (5'
end) and a
SacII site
(3' end inside the chaperone gene) for cloning
of the PCR fragment
into pT-HpHis cut with the same enzymes, yielding
pT-modHpHis
(Fig.
1).
5' truncation of the modified chaperone gene by 34 residues (102 bp)
and 70 residues (210 bp) resulted in two plasmids,
pT-

34HpHis
and pT-

70HpHis, after PCR with two
primers: one introducing an
NdeI site (including the ATG
start codon) at the new 5' end of
the gene and another introducing an
EcoRI site at the 3' end of
the gene. pT-modHpHis was
used as a template, and then the
EcoRI-
and
NdeI-digested PCR fragment was cloned into pT-modHpHis
cut
with the same enzymes (Fig.
1).
Fusion of the
ompA signal sequence to the modified and
truncated chaperone genes was carried out by PCR in a manner
similar
to that described for pT-ompALip-Hp. The resulting
plasmids were
named pT-ompA

70HpHis and
pT-ompA

34HpHis.
Overexpression of lipase in E. coli.
For initial
expression studies of recombinant lipase in E. coli, plasmid
pT-E(preLip-Hp) containing complete preLip-Hp
(EcoRI fragment) of pHES12 under the control of
PRL was constructed. However, after 3 h of
induction of transformed cells with this plasmid, no additional bands
of expressed lipase or chaperone were detected on Coomassie brilliant
blue R-250-stained SDS gels of cell extracts. A small band of 33 kDa
representing lipase was visualized after activity staining (data not
shown); this band corresponded to the low level of lipase activity (171 U/g of cells) measured after cell breakage (Table
1).
To increase expression levels, preLip-Hp was placed near
the strong, temperature-inducible

P
RL
promoter of pCYTEXP1, yielding
pT-preLip-Hp and, after
deletion of the chaperone gene, pT-preLip.
In addition, the
original signal sequence of the lipase gene was
deleted in
pT-Lip-Hp and replaced by the
ompA signal sequence,
known to increase expression levels and to transport the protein
across
the inner membrane, yielding pT-ompALip-Hp.
In contrast to pT-preLip-Hp, both vectors pT-Lip-Hp and
pT-ompALip-Hp (data not shown), in which the original
presequence
is no longer present, led to overexpression of the lipase
(expression
level, 40%) but not of the chaperone (Table
1). However,
the
lipase was expressed as inclusion bodies, and most of them were
inactive after purification; hence, no processing of the
ompA-lipase
gene occurred. This conclusion was also
confirmed by amino-terminal
sequencing. Only slightly increased levels
of expressed lipase
activity were detected with
pT-preLip-Hp (293 U/g of cells) and
pT-ompALip-Hp (547 U/g of cells), in which the lipase gene
is
preceded by a signal sequence and the chaperone gene is present.
The
purpose of the introduction of the
ompA signal sequence in
the construct pT-ompALip-Hp was to increase transport of
the lipase
across the inner membrane and hence to increase lipase
activity
due to the presence of a small amount of the chaperone in the
periplasm. The product was internally retained; however, a small
amount
of the lipase was exported to the periplasm. This result
showed that
the lipase activity (547 U/g) of the construct with
the
ompA signal sequence (pT-ompALip-Hp) was 13 times higher than
that of the construct without
ompA
(pT-Lip-Hp).
Overexpression of lipase chaperone in E. coli.
Although
the nucleotide sequence of the lipase gene has been elucidated
(15), the nucleotide sequence of the chaperone gene located
downstream of the lipase gene has not. Hence, an open reading frame of
1,032 bp, located 3 bp downstream of the lipase gene and encoding the
lipase chaperone, was identified (Fig.
2). While the average GC content of the
chaperone gene was 73%, a GC content of >90% was calculated for a
250-bp region at the 5' end. A putative Shine-Dalgarno sequence (GAAG)
was found inside the 3' region of the lipase gene.

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FIG. 2.
Complete nucleotide sequence and amino acid sequence of
the lipase chaperone of P. cepacia ATCC 21808 and the
C-terminal region of the lipase. The putative Shine-Dalgarno sequence
is boxed. The modified, codon-optimized 242 bp of the 5' region is
underlined, and exchanged nucleotides are indicated by boldfacing.
Arrows indicate positions of truncation.
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The deduced protein sequence comprises 344 amino acids and, hence,
codes for a protein with a molecular mass of 37.4 kDa.
Analysis of the
protein sequence by the method of Eisenberg et
al. (
8)
identified two hydrophobic stretches of amino acids
extending from
residues 14 to 34 and residues 50 to 70 and comprising
a putative
membrane anchor (Fig.
2).
To gain overexpression of the lipase chaperone and, hence, to use
the recombinant chaperone for in vitro refolding of the
overexpressed lipase, the expression vector pT-HpHis, in which
the
chaperone gene was placed directly downstream of the

P
RL promoter, was constructed. However, no expression of the chaperone
was
detected on SDS
gels.
Both the GC-rich 250-bp 5' region of the chaperone gene and the
amino-terminal hydrophobic stretches of amino acids (residues
14 to 34 and residues 50 to 70), comprising a putative membrane
anchor, might
adversely affect protein expression in
E. coli.
Thus, the
first 250 bp of the gene was replaced by a synthetic
fragment,
thereby lowering the GC content from >90 to 60% and
resulting in
modHp. In addition, the putative membrane
anchor
was removed by deleting the first 34 (

34Hp) and 70 (

70Hp) amino-terminal
amino
acids.
The modified and the truncated chaperone genes were inserted into
pCYTEXP1, yielding pT-modHpHis, pT-

34HpHis,
and pT-

70HpHis.
Expression levels of 10% were observed for the
truncated chaperones

34HpHis (34 kDa) and

70HpHis (31 kDa)
(Fig.
3), whereas with
modHp,
no additional band was observed after SDS-PAGE analysis
of
E. coli cells (data not shown). Fusion of the
ompA signal
sequence
to the truncated genes (pT-ompA

34HpHis and
pT-ompA

70HpHis) resulted
in further sixfold and fourfold
increases in expression, respectively
(Table
1 and Fig.
3). Although in
both
ompA-fused genes the signal
cleavage sites were
identical (Ala-Ala), cleavage of the
ompA leader sequence
reached only 50% for ompA

34Hp, as seen after
SDS-PAGE
analysis (Fig.
3, lane 8) and as proved by amino-terminal
sequencing.
Only ompA

34Hp formed insoluble inclusion bodies in
E. coli, while all other expressed chaperones were soluble.
Both

70HpHis and ompA

70HpHis were purified by Ni-NTA
chromatography
to >95% purity (Fig.
3).

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FIG. 3.
SDS-PAGE of overexpressed and Ni-NTA-purified lipase and
chaperone in E. coli. Proteins were stained with
Coomassie brilliant blue R-250. Lanes: 1, E. coli
pT-Lip-Hp cell lysate; 2, lipase inclusion bodies isolated from
E. coli pT-Lip-Hp cell lysate; 3, E. coli pT- 70HpHis cell lysate; 4, Ni-NTA-purified 70HpHis; 5, E. coli
pT-ompA 70HpHis cell lysate; 6, Ni-NTA-purified ompA 70HpHis;
7, E. coli pT- 34HpHis cell lysate; 8, E. coli pT-ompA 34HpHis cell lysate.
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In vitro refolding of lipase expressed in E. coli.
In a
first attempt, denatured lipase isolated from inclusion bodies was
subjected to different refolding procedures without the addition of the
chaperone, including those described by Beer et al. (3) for
the lipase of Rhizopus oryzae and by Frenken et al.
(10) for the lipase of P. glumae (data not
shown). However, only a poorly active lipase with a specific activity
of 25 U/mg or less was obtained.
Denatured lipase isolated from inclusion bodies, however, was
effectively refolded after 24 h of incubation at 4°C in
distilled
water in the presence of equal amounts (final concentrations,
5 to 10 µg/ml) of truncated chaperone. Refolding of 5 to 10 µg
of
purified and denatured mature lipase per ml with 5 to 30 µg
of
purified and denatured chaperone

70HpHis or ompA

70HpHis per
ml
yielded a highly active lipase with a specific activity of
3,580 to
4,180 U/mg (Table
2), comparable to or
even slightly
higher than the activity of the purified lipase secreted
from
recombinant
P. cepacia (3,470 U/mg) and purified
as described
by Hom (
15) and Kordel et al. (
26).
Increasing the concentration
of lipase 10-fold and, hence, also the
chaperone concentration
in the refolding mixture decreased the
refolding efficiency significantly,
by a factor of 8 (data not shown).
It was found that an excess
of chaperone is needed for correct lipase
folding, as for other
Pseudomonas lipase chaperones (
1,
13,
20,
31). In those
studies, it was found that at least one
lipase chaperone molecule
was needed for the correct folding of one
lipase molecule, because
the chaperone acts toward the lipase
noncatalytically.
In a simplified refolding protocol,
E. coli cell
extracts containing the different types of truncated chaperones in a
denatured
or native state were directly used for the in vitro refolding
of lipase. With all types of denatured or native chaperones but
ompA

34HpHis, the lipase could be effectively refolded (Table
3). However, the most effective chaperone
for lipase refolding
proved to be

70HpHis, yielding a highly active
lipase (up to
314,000 U of lipase per g of
E. coli
cells) with the simplified
refolding protocol, regardless of whether
the chaperone was used
in a denatured (4,660 U/mg) or a native (4,850 U/mg) state. In
contrast,

34HpHis and ompA

70HpHis gave rise
to a more active
lipase when they were used in a denatured state for
refolding.
The refolding efficiency of the unprocessed lipase ompALip, still
containing the
ompA signal sequence and produced by
E. coli pT-ompALip-Hp, was 10 times lower
than that of the mature lipase,
while lipase LipHis, fused to a
His
6 tag at the C terminus, could
not be refolded (data not
shown).
 |
DISCUSSION |
In previous work (15), the sequence of the lipase gene
of P. cepacia ATCC 21808 was elucidated and was found
to be highly homologous (>90%) to those of genes for other class I
Pseudomonas lipases, genes including at least five
cloned lipases from different P. cepacia
strains (22, 24, 30). The sequence of the chaperone gene has not been determined. Sequence analysis revealed a high homology of the protein sequence (>90%) with those of chaperones from
P. cepacia DSM 3959 (24) and M-12-33
(30) and Pseudomonas sp. strain KWI-56
(22), as expected.
The role of the chaperone gene located downstream of the lipase gene
for the in vivo and in vitro activation of Pseudomonas lipases has been well investigated for lipases of
Pseudomonas sp. strain 109 and P. aeruginosa
TE3285 (6, 31), belonging to class I, and lipases of
P. cepacia DSM 3959 (1, 13, 14, 24),
Pseudomonas sp. strain KWI-56 (21, 22), and
P. glumae PG1 (9, 11), belonging to class
II. Unlike the situation for other industrially relevant microbial
lipases, however, no efficient system for the production of large
amounts of active Pseudomonas lipase in a biologically safe
heterologous host such as E. coli has been described.
Since the overexpression of both the lipase and the chaperone needed
for in vitro activation is a prerequisite for the economic production
of lipase in E. coli, we subcloned the gene cluster for
the lipase and the chaperone into E. coli expression
vectors pUC19, pET20b(+) (data not shown), and pCYTEXP1.
Overexpression of the lipase gene (up to 40%) was achieved
only under the control of the strong, temperature-inducible
PRL promoter and when the original signal sequence was
either removed or replaced by an ompA signal sequence known
to increase protein expression in E. coli
(4). Comparable high expression levels for
Pseudomonas lipases (classes I and II) in E. coli have been reported for the prelipase of
Pseudomonas sp. strain KWI-56 (29) and the mature
lipase of P. aeruginosa TE3285 (31). The formation of inactive and insoluble inclusion bodies has also been
reported for several Pseudomonas lipases (classes I and II) expressed at higher levels in E. coli (7, 29,
31). Low lipase activities (171 to 547 U/g of cells) were
detected in cell lysates of recombinant E. coli cells
harboring plasmids containing both the lipase gene and the chaperone
gene of P. cepacia; similar observations were made with
Pseudomonas lipases expressed in E. coli
(9, 11, 20, 22, 24, 31, 39).
Most Pseudomonas lipase chaperones are only poorly expressed
in E. coli, and expression had to be observed by a
highly sensitive method, such as Western blotting (1, 9, 11,
13, 14, 21). In keeping with these findings, we found no
overexpression of unmodified P. cepacia ATCC 21808 lipase chaperone in E. coli, although the gene was
placed under the control of the strong
PRL promoter.
Sequence analysis identified a GC-rich (>90%) region at the 5' end of
the chaperone gene which might affect transcription in E. coli. However, even when we decreased the GC content to 60% by
replacement with a 250-bp synthetic, codon-optimized DNA fragment, we
could not increase expression. Frenken et al. (9, 11) showed
that the lipase chaperone of P. glumae expressed at low
levels in E. coli as well as in wild-type P. glumae is located in the periplasmic space and anchored to the
inner membrane by an amino-terminal peptide stretch. It is generally
assumed that lipase chaperones of Pseudomonas are involved
both in translocation and in folding of lipase during its secretion
(6, 9, 11, 20, 22, 24, 41). When we investigated the
amino-terminal region of the chaperone, we found two hydrophobic
stretches (residues 14 to 34 and residues 50 to 70) which might
function as a membrane anchor and in turn hamper protein overexpression
by blocking translocation in E. coli. Truncation of the
amino terminus by 34 and 70 residues, respectively, led to
overexpression of the chaperone in E. coli which could
be further increased (from 10% to 60%) by fusion of the truncated
genes to an ompA signal sequence.
In vitro refolding of Pseudomonas lipases (classes I and II)
expressed so far in E. coli resulted in poorly active
lipase preparations, with 5 to 10% of the activity of the native
enzyme (13, 19, 21, 33). In contrast, by using overexpressed truncated chaperones either in the native or in the denatured state, we
could, for the first time, quantitatively refold a
Pseudomonas lipase overexpressed in E. coli
(100% specific activity) with high yields (up to 314,000 U/g of
E. coli cells) in a simple refolding procedure. We
concluded that neither the truncated N-terminal part (70 residues) of
the chaperone nor the fused ompA signal sequence
(
70HpHis) had any influence on the folding activity, while
ompA
34HpHis (not processed) solubilized (with 8 M urea) from
inclusion bodies no longer showed any folding activity. Best refolding
results were obtained when the lipase and the chaperone were present in
similar amounts in the refolding mixture, as was observed for the in
vitro refolding of other lipases from Pseudomonas (1,
33). The fact that denatured chaperones
70HpHis,
ompA
70HpHis, and
34HpHis could be applied in the refolding
suggested that the active conformation of denatured chaperones is very
quickly restored upon dilution in the refolding mixture, thus allowing a simple and economic refolding of denatured lipases by use of crude
chaperones overproduced in E. coli and solubilized with urea. With this procedure, as much as 314,000 U of lipase per g of wet
cells in a highly pure state and ready to be used in biotechnological
applications could be easily obtained. To further simplify the
production of active lipase, a coexpression system in which both the
lipase and the chaperone are located on one plasmid and each gene is
placed under the control of the strong
PRL promoter is
being developed.
 |
ACKNOWLEDGMENTS |
Dinh Thi Quyen gratefully acknowledges a scholarship from the
Konrad Adenauer Foundation, Bonn, Germany. We thank Boehringer Mannheim
for providing the recombinant P. cepacia strain.
We thank Volker Nödinger for N-terminal sequencing and
H. Atomi for helpful discussions.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Institut
für Technische Biochemie, Universität Stuttgart,
Allmandring 31, D-70569 Stuttgart, Germany. Phone: 49-711-685-3192. Fax: 49-711-685-4569. E-mail:
rolf.d.schmid{at}rus.uni-stuttgart.de.
 |
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