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Applied and Environmental Microbiology, March 1999, p. 916-922, Vol. 65, No. 3
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
A Search for Ligninolytic Peroxidases in the Fungus
Pleurotus eryngii Involving
-Keto-
-Thiomethylbutyric
Acid and Lignin Model Dimers
Lucília
Caramelo,
María Jesús
Martínez, and
Ángel T.
Martínez*
Centro de Investigaciones Biológicas,
Consejo Superior de Investigaciones Científicas, E-28006
Madrid, Spain
Received 23 September 1998/Accepted 1 December 1998
 |
ABSTRACT |
Because there is some controversy concerning the ligninolytic
enzymes produced by Pleurotus species, ethylene release
from
-keto-
-thiomethylbutyric acid (KTBA), as described
previously for Phanerochaete chrysosporium lignin
peroxidase (LiP), was used to assess the oxidative power of
Pleurotus eryngii cultures and extracellular proteins.
Lignin model dimers were used to confirm the ligninolytic capabilities
of enzymes isolated from liquid and solid-state fermentation (SSF)
cultures. Three proteins that oxidized KTBA in the presence of veratryl
alcohol and H2O2 were identified (two proteins
were found in liquid cultures, and one protein was found in SSF
cultures). These proteins are versatile peroxidases that act on
Mn2+, as well as on simple phenols and veratryl alcohol.
The two peroxidases obtained from the liquid culture were able to
degrade a nonphenolic
-O-4 dimer, yielding veratraldehyde, as well
as a phenolic dimer which is not efficiently oxidized by P. chrysosporium peroxidases. The former reaction is characteristic
of LiP. The third KTBA-oxidizing peroxidase oxidized only the phenolic
dimer (in the presence of Mn2+). Finally, a fourth
Mn2+-oxidizing peroxidase was identified in the SSF
cultures on the basis of its ability to oxidize KTBA in the presence of
Mn2+. This enzyme is related to the Mn-dependent peroxidase
of P. chrysosporium because it did not exhibit activity
with veratryl alcohol and Mn-independent activity with dimers. These
results show that P. eryngii produces three types of
peroxidases that have the ability to oxidize lignin but lacks a typical
LiP. Similar enzymes (in terms of N-terminal sequence and catalytic
properties) are produced by other Pleurotus species. Some
structural aspects of P. eryngii peroxidases related to the
catalytic properties are discussed.
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INTRODUCTION |
Lignin is a three-dimensional
biopolymer composed of oxygenated phenylpropanoid units. The most
common linkage between the units is an arylglycerol-
-aryl ether or
-O-4 bond (1). Degradation of recalcitrant lignin is an
oxidative and nonspecific process carried out by white rot
basidiomycetes, including the best-known ligninolytic organism,
Phanerochaete chrysosporium (24). Some white rot
fungi, such as Pleurotus eryngii and related species, have
the capacity to remove lignin preferentially (i.e., with limited attack
on cellulose) (30). This fact is relevant for environmentally friendly biotechnological delignification in paper pulp
manufacture (7) and feed production (19).
The most prominent enzymes associated with lignin degradation are
lignin peroxidase (LiP) and manganese-dependent peroxidase (MnP), as
well as laccases and H2O2-producing oxidases
(24). LiP appears to be the key enzyme in the oxidation of
nonphenolic phenylpropanoid units which leads to polymer fragmentation.
This enzyme oxidizes aromatic nuclei to aryl cation radicals which undergo several nonenzymatic reactions, including cleavage of C-C and
C-O linkages (14, 24). MnP oxidizes Mn2+ to
Mn3+, which in turn may attack phenolic structures in
lignin (10) as long as it is stabilized by suitable metal
chelators secreted by fungi (25, 27); and also may attack
nonphenolic structures via lipid peroxidation (6).
Laccase and aryl-alcohol oxidase (AAO) have been purified from cultures
of P. eryngii in glucose-ammonium medium and have been
characterized (13, 34), and it has been suggested that these
enzymes are involved in lignin degradation via oxygen activation and
redox mediators (12, 31, 34). However, significant levels of
LiP and MnP have not been detected in cultures of P. eryngii in glucose-ammonium medium. Recently, a high level of
Mn2+-oxidizing peroxidase activity was observed in this
fungus when peptone was used as an N source (32), and the
possibility that LiP was present was suggested by the results of a
Western blot hybridization analysis performed with antibodies against
P. chrysosporium LiP (37). Nevertheless, LiP
activity has not been detected in P. eryngii, and although a
LiP type of peroxidase has been found in Pleurotus ostreatus
(3), a Southern blot hybridization analysis performed with a
DNA probe from the P. chrysosporium gene lpo demonstrated that P. eryngii does not have a similar gene
(18).
Veratryl alcohol oxidation, the most common test for LiP detection
(42), can be inhibited by peptone constituents
(40) or by aromatic fungal metabolites or lignin-derived
products (43). Therefore, it would be useful to evaluate the
production of ligninolytic enzymes in P. eryngii by using a
different detection method. An assay which has been used to assess the
potential for oxidative attack of the lignin macromolecule is the assay
which measures ethylene release from
-keto-
-thiomethylbutyric
acid (KTBA) (21, 28). This assay is used to detect
one-electron strong oxidants, such as LiP and the hydroxyl free radical
(OH·) (Fig. 1A). A correlation between
KTBA oxidation and ligninolytic activity has been observed in P. chrysosporium cultures (21). On the other hand, lignin model dimers with the most frequently found lignin intermonomer linkages (Fig. 1B and C) may be used to identify the specific degradation reactions of phenolic and nonphenolic phenylpropanoid units
(the latter account for 80 to 90% of the total polymer) (9)
produced by either ligninolytic organisms or enzymes (24).

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FIG. 1.
Oxidation of KTBA to ethylene (4) (A) and
transformation of nonphenolic (B) and phenolic (C) -O-4 dimers were
used to investigate the ligninolytic enzymes produced by P. eryngii. R· represents an aromatic radical from LiP or a
hydroxyl radical from Fenton type reactions; generation of both of
these chemical species requires H2O2, and
generation of the hydroxyl radical also requires an
Fe3+-reducing system. Me, methyl.
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Both KTBA and lignin model dimers were used to study the mechanism of
lignin degradation by P. eryngii. This study led to purification of KTBA-oxidizing enzymes from supernatants of liquid cultures and from wheat straw treated with the fungus under solid-state fermentation (SSF) conditions similar to the conditions found in the
natural habitats of ligninolytic basidiomycetes. The ligninolytic potentials of these enzymes were evaluated by using different substrates, including phenolic and nonphenolic
-O-4 dimers.
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MATERIALS AND METHODS |
Organisms and cultures.
The fungal strains used were
P. eryngii ATCC 90787 (= IJFM A169 = CBS 613.91) and
P. chrysosporium ATCC 24725 (= VKM F-1767 = IJFM A547).
Shaken cultures of P. eryngii in glucose-peptone medium were
inoculated and grown as described elsewhere (32), and 5-ml
samples were removed periodically for analysis. As indicated below, 0.1 mM MnSO4 was sometimes added to the medium. P. chrysosporium shallow cultures were grown as described by Tien and
Kirk (42) by using Falcon 25-cm2 tissue culture
flasks that contained 5 ml of medium inoculated with a spore suspension
and were flushed with O2 through rubber caps.
Wheat (
Triticum aestivum) straw from SAICA (Zaragoza, Spain)
was sliced into 10- to 20-mm lengths and was sterilized at 120°C
for
15 min. SSF was carried out in a horizontal rotary fermentor
with six
2-liter bottles containing 125 g of straw and 375 ml
of water
(including inoculum) (
7). No minerals or additional
N
sources were added. The inocula were obtained from 15-day-old
stationary cultures grown in glucose-ammonium medium (
13),
which
were homogenized, grown for additional 3 to 5 days at 180 rpm.
After inoculation with the pellets obtained, the bottles were
gently
rotated for 24 h at 1 rpm and then incubated for 20 days
at 28°C
with rotation (1 rpm) for 1 h per day and a wet air flux
of 166 ml/min per
bottle.
Enzyme assays.
LiP activity was measured by monitoring the
oxidation of 2 mM veratryl alcohol to veratraldehyde
(
310, 9.3 mM
1 cm
1) in 0.1 M
sodium tartrate (pH 3) supplemented with 0.4 mM
H2O2. Controls without
H2O2 were included. AAO activity was measured in reaction mixtures containing 5 mM veratryl alcohol and 0.1 M
phosphate buffer (pH 6). MnP activity was measured by monitoring the
formation of the Mn3+-tartrate complex (
238,
6.5 mM
1 cm
1) from 0.1 mM MnSO4
in 0.1 M sodium tartrate (pH 5) supplemented with 0.1 mM
H2O2. Mn-mediated oxidation of 0.1 mM
2,6-dimethoxyphenol (DMP) to the dimeric product coerulignone
(
469, 27.5 mM
1 cm
1, referred
to as the DMP concentration) (32) was estimated under the
same conditions. Mn-independent peroxidase and laccase activities were
measured by using 0.1 mM DMP in 0.1 M sodium tartrate (pH 5). In the
case of Mn-independent peroxidase 0.1 mM H2O2
was added to the reaction mixture. One activity unit was defined as the amount of enzyme that oxidized 1 µmol of substrate per min. When purified enzymes were compared, the activities mentioned above (as well
as the KTBA-oxidizing activity described below) were expressed as
specific activities in units per milligram of protein, as estimated
with the Bradford reagent obtained from Bio-Rad.
In vivo and in vitro ethylene release from KTBA.
Assays to
determine oxidation of KTBA (final concentration, 3.3 mM) (Fig. 1A)
were performed in triplicate by using flasks closed with rubber caps,
and the reactions were stopped by adding 0.5 to 1 ml of 3 M
H2SO4. In vivo assays were performed with 5-ml samples from P. eryngii liquid cultures or with 1-g straw
samples from SSF (in 5 ml of reaction mixture) that were placed in
sterile 25-cm2 tissue culture flasks and incubated for 5 to
8 h. In the case of P. chrysosporium, whole 5-ml
cultures were used. As indicated below, 0.1 mM MnSO4 or 0.5 mM H2O2 was sometimes added. The in vitro
assays to determine KTBA oxidation were performed in 12-ml flasks
containing 1-ml reaction mixtures at room temperature for 30 min. For
enzyme purification (see below), the KTBA assay was performed with
0.1-ml aliquots obtained from chromatographic fractions. The reaction
mixtures contained 1 mM veratryl alcohol, 0.4 mM H2O2, and 0.1 M sodium tartrate (pH 3). The
assay to determine KTBA oxidation by peroxidases purified from P. eryngii cultures was also performed with 0.1 M sodium tartrate (pH
5) supplemented with 0.1 mM MnSO4. The effects of
H2O2 concentrations and pH were investigated.
The possibility that KTBA oxidation could be increased by keeping the
H2O2 concentration low was tested (the total
H2O2 was added in six aliquots which were
injected every 5 min). Oxidation of KTBA by LiP and MnP from P. chrysosporium was also analyzed. LiP was produced and purified as
described previously (42), and MnP was a gift from B. Kurek.
The LiP and MnP reactions were performed as described above for
P. eryngii peroxidases in the presence of veratryl alcohol
and Mn2+, respectively. KTBA oxidation by P. eryngii laccase (34) was examined by using up to 0.5 U
of laccase per ml in 0.1 M sodium tartrate (pH 5) and adding 0.1 mM DMP
or 10 mM 2,2-azinobis(3-ethylbenzothiazolin-6-sulfonate).
The ethylene in 0.5-ml samples obtained from the headspaces of in vivo
and in vitro assay was analyzed by gas chromatography
in the isothermic
mode (95°C) by using a Porapack-N column and
a flame ionization
detector; the injector and detector temperatures
were both 50°C, and
the carrier gas was helium at a flow rate
of 50 ml/min. Chromatographic
measurements were made in triplicate,
and the mean values are presented
below. The KTBA-oxidizing activity
of a culture was expressed as the
amount of ethylene released
per hour of reaction (in nanomoles per
milliliter per hour). In
the in vitro reactions, the activity
corresponded to the total
amount of ethylene released at the end of the
KTBA oxidation reaction
by chromatographic fractions (expressed in
micromoles per milliliter)
or purified enzymes (expressed in
micromoles per
milligram).
Purification of KTBA-oxidizing enzymes from P. eryngii.
The supernatants from liquid cultures were concentrated
15-fold and dialyzed (5-kDa cutoff membrane) against 10 mM sodium tartrate (pH 4.5). The contents of the SSF bottles were extracted with
3 liters of water by shaking the bottles at 200 rpm for 1 h, and
the extracts were filtered, concentrated 20-fold, and dialyzed. The
concentrates were loaded onto a Bio-Rad Q-cartridge (1 ml/min), and the
retained fractions were eluted with 1 M NaCl. The fractions capable of
oxidizing KTBA in the presence of veratryl alcohol or Mn2+
were applied to a Sephacryl S-200 HR (Pharmacia K16/100) column. The
KTBA-oxidizing fractions were chromatographed with a Mono-Q column
(Pharmacia HR 5/5) by using 10 mM sodium tartrate (pH 5) and a 0 to
0.25 M NaCl gradient (0.8 ml/min, 30 min).
The homogeneity of proteins was verified by sodium dodecyl
sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) in 12%
polyacrylamide
gels and isoelectric focusing in 5% polyacrylamide gels
by using
a pH range of 2.5 to 5.5; protein bands were stained with
AgNO
3 or Coomassie blue R-250. In addition to SDS-PAGE
including Bio-Rad
standards, the
Mr of proteins
were estimated by matrix-assisted
laser desorption and ionization-time
of flight (MALDI-TOF) mass
spectrometry by using a sinapic acid matrix.
The N-terminal sequences
were determined by automated Edman degradation
of 5 µg of protein
with an Applied Biosystems model 494 pulsed-liquid
protein
sequencer.
Transformation of lignin model dimers by the enzymes.
The
two dimers used, veratrylglycerol-
-guaiacyl ether (nonphenolic
-O-4 dimer) and guaiacylglycerol-
-guaiacyl ether (phenolic
-O-4 dimer) (Fig. 1B and C) were synthesized by the methods
described by Adler et al. (2) and Nakatsubo (35).
The reaction mixtures used for degradation of the nonphenolic dimer
contained peroxidase (0.5 U/ml, measured on the basis of the
veratraldehyde formed), the dimer at a concentration of 0.25 mM, 0.1 M
sodium tartrate (pH 3.5), and 0.1 mM H2O2
(added every 5 min). The effect of adding 0.25 mM veratryl alcohol or
0.1 mM MnSO4 was also determined. Phenolic dimer
degradation was assayed like nonphenolic dimer degradation except that
the pH was 4.5 (with or without 0.1 mM Mn2+) and the
peroxidase concentration was 0.25 to 1 U/ml (measured on the basis of
the Mn3+-tartrate formation). The reactions were monitored
by high-performance liquid chromatography by using standard calibration
curves for both the substrates (the phenolic and nonphenolic dimers)
and the reaction product (veratraldehyde). Samples (20 µl) were
injected into a Pharmacia system equipped with a Spherisorb S50DS2
column. The analyses were carried out at 30°C with a flow rate of 1 ml/min by using methanol-water as the eluent (starting with 20%
methanol and ending with 40% methanol after 30 min). The UV detector
was operated at 210 and 250 nm or at 280 and 310 nm. Fourier transform infrared spectra were obtained with a model IFS 28 Equinox spectrometer (Brucker) by using a DTGS-type detector and 100 scan accumulation.
 |
RESULTS |
Action of fungal cultures on KTBA.
The ability to oxidize KTBA
was investigated during growth of P. eryngii under both
liquid and SSF culture conditions. The profiles obtained with liquid
cultures were compared with the profiles obtained with P. chrysosporium (Fig. 2). Similar
amounts of ethylene were released from KTBA by the two fungi despite
the differences in the enzymatic activities produced. LiP was detected only in P. chrysosporium, and laccase and AAO were found
only in P. eryngii. In both fungi the highest levels of
activity were the levels of peroxidase that oxidize Mn2+ to
Mn3+. The highest level of LiP activity appeared after the
highest levels of MnP activity were observed, and the peak matched the KTBA oxidation activity in the P. chrysosporium culture (day
5). In P. eryngii, the broad peroxidase activity peak, the
laccase activity peak, and the onset of AAO activity coincided roughly with the time when the maximum amount of ethylene was released from
KTBA (day 9). The same enzymes were detected in SSF cultures of
P. eryngii, and it was not possible to correlate ethylene
release with an individual enzymatic activity.

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FIG. 2.
Patterns of enzyme production and KTBA oxidation by
P. eryngii (A) and P. chrysosporium (B) cultures.
Symbols: , ethylene released from KTBA; , LiP activity; , MnP
activity; , laccase activity; , AAO activity.
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When Mn
2+ was included in the medium, KTBA oxidation was
partially inhibited. However, addition of Mn
2+ to culture
samples before incubation with KTBA resulted in increases
in the
amounts of ethylene. Addition of H
2O
2 to the
reaction mixture
resulted in ethylene release similar to that of the
control, which
showed that H
2O
2 was not a
limiting factor in KTBA oxidation as
it could be generated by AAO
during
incubation.
Purification of KTBA-oxidizing enzymes.
The enzymes
responsible for KTBA oxidation were purified by using 8-day-old liquid
cultures and 21-day-old SSF cultures of P. eryngii; these
cultures exhibited maximal activity with KTBA. The ethylene release
tests during protein purification were performed in the presence of
H2O2 and veratryl alcohol (as described above for P. chrysosporium LiP detection), as well as in the
absence of these compounds. Supernatants from liquid cultures and
extracts from straw treated with the fungus were concentrated and
dialyzed, and the colored compounds, which were especially abundant in
the straw extracts, were removed by using a Q-cartridge. After
molecular size exclusion gel permeation of samples from liquid
cultures, a protein peak with strong KTBA-oxidizing peroxidase
activity, as well as a high level of absorbance at 410 nm, was obtained (Fig. 3A). Mono-Q chromatography of this
peak revealed two proteins (peroxidases PL1 and PL2) that were capable
of oxidizing KTBA in the presence of H2O2 and
veratryl alcohol (Fig. 3B). Despite the fact that all of the fractions
obtained from Sephacryl chromatography of straw extracts had high
levels of absorbance at 280 nm, a wide KTBA oxidation peak was
identified, which corresponded to the peak in the 410-nm profile (Fig.
3C). Two 410-nm peaks were obtained by Mono-Q chromatography; however,
only one of these peaks (peroxidase PS1) was able to oxidize KTBA,
while the second peak (designated peroxidase PS3 because the peroxidase
PS1 tail was designated peroxidase PS2) was not capable of oxidizing
KTBA under the conditions described above (Fig. 3D). However, when KTBA
oxidation was assayed in the presence of Mn2+ and
H2O2, some ethylene was released with the four
peroxidases obtained. These peroxidases, which were purified from
liquid and SSF cultures, were different, as shown by their N-terminal
sequences (Table 1) and the catalytic
properties discussed below. Their molecular masses (42 to 45 kDa as
determined by SDS-PAGE and 36 to 39 kDa as determined by MALDI-TOF) and
isoelectric points (pI 3.65 to 3.80) differed only slightly.

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FIG. 3.
Purification of KTBA-oxidizing peroxidases from liquid
(A and B) and SSF (C and D) cultures of P. eryngii:
isolation of peroxidases PL1, PL2, PS1, and PS3 by Mono-Q
chromatography (B and D) of the KTBA-oxidizing fractions (elution
volumes, 50 to 55 ml in panel A and 50 to 60 ml in panel B) from
Sephacryl S-200 gel permeation (A and C) of concentrated extracellular
proteins. , 280-nm profile; ..., 410-nm profile; , amount of
ethylene released from KTBA in the presence of 1 mM veratryl alcohol;
----, NaCl gradient.
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TABLE 1.
N-terminal sequences of Mn2+-oxidizing
peroxidases (some of which also oxidize veratryl alcohol) produced by
Pleurotus species in liquid cultures or on
lignocellulosic substrates
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KTBA oxidation by P. eryngii enzymes.
Information
on the mechanism of oxidation of KTBA by P. eryngii
peroxidases was obtained by monitoring ethylene release by gas
chromatography and veratryl alcohol oxidation by UV spectrophotometry (data not shown). In the absence of KTBA, veratryl alcohol oxidation to
veratraldehyde by peroxidases PL1 and PL2 (and to some extent by
peroxidase PS1) was revealed by increased absorbance at 310 nm.
However, when KTBA was added to the reaction mixture, ethylene was
obtained, but there was no increase in absorbance at 310 nm. This
observation was attributed to the presence of an indirect oxidation
mechanism. The mediator formed by the action of the enzyme, probably
the veratryl alcohol cation radical, oxidized KTBA, and there was
concomitant production of ethylene. In the absence of enzyme, mediators
(veratryl alcohol or Mn2+), or cofactors (hydroperoxides),
no KTBA oxidation was observed. Laccase from P. eryngii was
not capable of releasing ethylene from KTBA, even in the presence of
2,2-azinobis(3-ethylbenzothiazolin-6-sulfonate) or DMP as a potential mediator.
The results of a comparison of KTBA oxidation by the four
P. eryngii peroxidases in the presence of veratryl alcohol and
Mn
2+ are shown in Table
2. When phenols were used as
mediators, no
ethylene was produced. The activities obtained with
Mn
2+, DMP, and veratryl alcohol (as estimated directly with
the fractions
collected from Mono-Q chromatography) showed that
peroxidase PS3
differed from the other peroxidases because of its
higher specific
activity with Mn
2+ and its lack of activity
with veratryl alcohol (Table
2). This
explains the lack of KTBA oxidation in the presence of this compound
and the release of high levels of ethylene in the presence of
Mn
2+.
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TABLE 2.
Comparison of the four KTBA-oxidizing peroxidases
isolated from liquid cultures (peroxidases PL1 and PL2) and SSF
cultures (peroxidases PS1 and PS3) of P. eryngii: enzymatic
activities, KTBA oxidation, and degradation of -O-4 dimers (effects
of Mn2+ and veratryl alcohol)
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As with
P. eryngii peroxidases, KTBA oxidation in the
presence of Mn
2+ was also observed with MnP from
P. chrysosporium. However, this
peroxidase was inhibited by
H
2O
2 concentrations greater than 0.2
mM, which
slightly affected
P. eryngii peroxidases (Fig.
4) (
P. chrysosporium LiP was
more susceptible to H
2O
2 than the peroxidases
discussed above). Moreover, when the concentration of
H
2O
2 was
greater than 0.5 mM, more ethylene was
released by the
P. eryngii peroxidases if the total dose was
added in five aliquots during
incubation.

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FIG. 4.
Inhibition of P. eryngii peroxidase PL2
activity ( ) by different amounts of H2O2,
compared with P. chrysosporium MnP activity
(----).
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Finally, we compared the amount of ethylene released from KTBA by
P. eryngii PL2 with the amount of ethylene released by
P. chrysosporium LiP in the presence of veratryl alcohol and
the
amount of ethylene released by the
P. eryngii peroxidase
with
the amount of ethylene released by
P. chrysosporium MnP
in the
presence of Mn
2+. Under the reaction conditions used
(we estimated the same activities
by using veratryl alcohol or
Mn
2+ oxidation), the
P. eryngii enzyme released
more ethylene per
activity unit (2,280 nmol/U in the presence of
veratryl alcohol
and 250 nmol/U in the presence of Mn
2+)
than
P. chrysosporium LiP (1,730 nmol/U) and MnP (70 nmol/U)
released. However, LiP produced more ethylene when the same amount
of
protein was used because of its higher specific
activity.
Transformation of lignin model dimers by the P. eryngii
peroxidases.
We investigated degradation of both phenolic and
nonphenolic
-O-4 dimers by peroxidases from liquid and SSF cultures
of P. eryngii. The phenolic dimer was degraded by
peroxidases PL1 and PL2 in the absence of Mn2+ (Table 2).
However, the reaction was enhanced by Mn2+ (Fig.
5A), and the highest degradation rate was
observed at pH values around 4.5. On the other hand, peroxidases PS1
and PS3 from SSF cultures required Mn2+ in order to attack
the phenolic dimer (Fig. 5B). Despite the fact that both of these
enzymes exhibited Mn-independent activity with DMP, they differed from
peroxidases obtained from liquid cultures by exhibiting lower levels of
activity with guaiacol (the specific activities with 5 mM guaiacol were
only 10 to 20% of the specific activities of the liquid culture
peroxidases). During the peroxidase reaction with phenolic dimers, a
pale brown precipitate was formed, which was characterized by Fourier
transform infrared signals at 1,727, 1,628, 1,502, 1,464, 1,259, 1,215, and 1,125 cm
1 and probably resulted from condensation of
the aromatic radicals formed.

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FIG. 5.
Differences between P. eryngii peroxidases
PL2 (A) and PS3 (B), as shown by oxidation of a phenolic -O-4 dimer
in the presence ( ) and in the absence (...) of 0.1 mM
Mn2+ (0.5 U of peroxidase per liter, estimated as
Mn3+-tartrate, and 0.1 M tartrate [pH 4.5] were used).
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As shown in Table
2, nearly 20% of the nonphenolic dimer was degraded
with peroxidase PL2 from liquid cultures under the
reaction conditions
used. The dimer was stoichiometrically transformed
into veratraldehyde,
which was the only product detected by high-performance
liquid
chromatography. The highest reactions rates were observed
at pH 3 to
3.5. Similar results were obtained with peroxidase
PL1, but peroxidases
PS1 and PS3 from SSF cultures (which exhibited
a low level of activity
and no activity with veratryl alcohol,
respectively) were not able to
catalyze this reaction. Transformation
of the nonphenolic dimer was not
affected by veratryl alcohol
or Mn
2+. Very similar
degradation rates were obtained with
P. chrysosporium LiP
when the same enzyme activity and reaction pH were
used.
Two different KTBA-oxidizing peroxidases have recently been purified
from liquid (peptone medium) and SSF cultures of
Pleurotus pulmonarius CBS 507.85 (data not shown). The peroxidase obtained
from a liquid culture degraded
lignin model dimers in the absence
of
Mn
2+.
 |
DISCUSSION |
Detection of the ligninolytic activity of P. chrysosporium peroxidases was related to the use of KTBA and
lignin model dimers as substrates. When Kuwahara et al. (28)
purified the two ligninolytic peroxidases secreted by this fungus, LiP
was detected on the basis of its ability to release ethylene from KTBA
in the presence of veratryl alcohol. Its ability to degrade a
nonphenolic
-O-4 dimer was considered a reflection of its
ligninolytic capabilities (41). In the present study we
found that P. eryngii, a fungus that was investigated
because of its ability to degrade wheat lignin selectively (30), oxidizes KTBA to ethylene when it is grown in
peptone-containing media, as well as during treatment of straw under
the SSF conditions used for biomechanical and biosemichemical pulping
(7, 11, 30). LiP activity was not detected in the cultures
mentioned above, and the oxidation of veratryl alcohol observed was due to Pleurotus AAO. However, the KTBA oxidation observed was
similar to that found in P. chrysosporium cultures grown
under ligninolytic conditions. KTBA oxidation in the absence of a
typical LiP has also been observed in some other fungi (22,
29).
The search for ligninolytic enzymes in P. eryngii resulted
in identification of four proteins that have the ability to release ethylene from KTBA (Table 2). Three of these proteins (one protein from
SSF cultures and two proteins from liquid cultures) were detected under
the conditions used to identify LiP in P. chrysosporium (20) (i.e., they degraded KTBA in the presence of
H2O2 and veratryl alcohol, which in the absence
of KTBA was oxidized to veratraldehyde). These peroxidases also
oxidized Mn2+, as well as different phenols in the absence
of Mn2+. Phenolic compounds inactivate LiP (15)
and can interfere with veratryl alcohol oxidation by P. eryngii peroxidases because of competitive inhibition. This
explains why peroxidase activity with veratryl alcohol was not detected
in peptone-containing medium or in SSF extracts, which contained
different phenols (40, 43). The KTBA-oxidizing enzymes
obtained from liquid cultures were the same peroxidases as those
described previously by Martínez et al. (32) as two
MnP isoenzymes that exhibit Mn-independent activity with some aromatic
substrates. In the present study we observed some of the LiP
characteristics of these enzymes, such as the ability to degrade
nonphenolic
-O-4 dimers (yielding veratraldehyde) and the ability to
release ethylene from KTBA in the presence of veratryl alcohol. It is
interesting that the P. eryngii peroxidases oxidized both
dimers in the absence of mediators, Mn2+, or veratryl
alcohol, whereas KTBA oxidation was dependent on the presence of these
compounds. The third enzyme that could oxidize KTBA in the presence of
veratryl alcohol and H2O2 (peroxidase PS1) was
found in the SSF cultures. This peroxidase exhibited high levels of
activity with Mn2+ and DMP, lower levels of activity with
veratryl alcohol and guaiacol, and no activity with the dimers used. It
differs from P. chrysosporium MnP mainly by its
Mn-independent activity with DMP and veratryl alcohol. The lack of
activity with the two model dimers revealed that this enzyme, isolated
for the first time in this study, is different from the peroxidases
obtained from liquid cultures (as confirmed by N-terminal sequencing).
The three peroxidases discussed above were identified on the basis of
their abilities to oxidize KTBA in the presence of veratryl alcohol.
However, when assessing KTBA oxidation by P. eryngii
cultures, we found that adding Mn2+ to the reaction
mixtures enhanced ethylene release. A similar result suggested that MnP
may be involved in KTBA oxidation by Trametes versicolor
(4). This finding led to identification and purification of
a fourth peroxidase in the SSF cultures of P. eryngii
(peroxidase PS3), which oxidized KTBA in the presence of
Mn2+. The catalytic properties of this enzyme, which was
isolated for the first time in this study, are similar to those of
previously described Mn-dependent peroxidases (it does not oxidize
veratryl alcohol or nonphenolic dimers, and oxidation of the phenolic
dimer is strictly dependent on Mn2+).
In this study we found that P. eryngii produces three types
of extracellular peroxidases. One of these peroxidases, which is found
only in SSF cultures, is related to the MnP of P. chrysosporium. The second peroxidase is a polyvalent peroxidase
that is isolated from liquid cultures and exhibits both LiP and MnP
types of catalytic properties, including Mn2+ oxidation and
direct oxidation of phenolic and nonphenolic dimers. It differs from
P. chrysosporium MnP and LiP with respect to oxidation of
phenols (P. chrysosporium MnP requires Mn2+ to
oxidize phenols [10], and LiP requires veratryl
alcohol [26]). The third type of peroxidase, which is
isolated from SSF cultures, exhibits activity with Mn2+ and
phenols, a low level of activity with veratryl alcohol, and no activity
with dimers, suggesting that the redox potential is intermediate
between the redox potentials of the other two P. eryngii
peroxidases. Similar Mn-oxidizing peroxidases are produced by other
Pleurotus species grown in liquid media or on
lignocellulosic substrates under SSF conditions (Table 1). Based on
their catalytic properties and N-terminal sequences (or whole protein
sequences when available), the peroxidases could be classified into the following four groups: (i) group i, including P. eryngii
peroxidase PS1 from wheat straw cultures, P. ostreatus
peroxidase MnP2 from sawdust (38), and P. pulmonarius peroxidase from wheat straw (8) (N
terminus, VTCATGQTT); (ii) group ii, including P. eryngii peroxidase from liquid cultures (32) (including two allelic variants), P. ostreatus peroxidases from sawdust (MnP1)
(38) and liquid cultures (39), and P. pulmonarius peroxidase from liquid cultures (8) (N
terminus, ATCDDGRTT); (iii) group iii, including P. eryngii
peroxidase PS3 from wheat straw (N terminus, VTCADGNTV); and (iv) group
iv, including the P. ostreatus peroxidase described by Asada
et al. (5) from liquid cultures (N terminus, ATCAGGQVT). The
peroxidases in groups iii and iv can be considered close relatives of
P. chrysosporium MnP, whereas the peroxidases in groups i
and ii correspond to two different versatile peroxidases which have
been found in the three Pleurotus species. Similar peroxidases have been found recently in Bjerkandera adusta
(16) and Bjerkandera sp. (33); the
latter was described as a LiP-MnP "hybrid" peroxidase. These
Pleurotus and Bjerkandera
Mn2-oxidizing peroxidases can oxidize typical LiP
substrates, such as veratryl alcohol and dimethoxybenzenes, and
inhibition studies have shown that they have different binding sites
for Mn2+ and veratryl alcohol or dyes (17, 33).
Molecular models for the new polyvalent peroxidases produced by
P. eryngii (peroxidases PL1 and PS1) have been constructed recently (Brookhaven Protein Database entries 1A20 and 1BQW), and these
models reveal greater structural (and sequence) homology with P. chrysosporium LiP than with MnP. This could explain the LiP type
properties observed and the crossed-reactivity with the anti-LiP
antibodies used by Orth et al. (37). Moreover, these P. eryngii peroxidases have a putative Mn interaction site
(which includes inner heme propionate and peroxidase PL1 Glu-36,
Glu-40, and Asp-175 residues or peroxidase PS1 Glu-36, Glu-40, and
Asp-181 residues) that is involved in Mn2+ oxidation
(17). It is necessary to mention that Mn2+
oxidation by both wild-type and recombinant LiP isoenzyme H2 has been
reported (23, 36), but this isoenzyme does not have an
Mn-binding site (Brookhaven Protein Database entry 1QPA) and the
mechanism involved is not known. The versatile catalytic properties of
some Pleurotus peroxidases can explain why these enzymes
have been reported by different authors to be either LiP (3)
or MnP (32, 39). Additional studies on the regulation and
structure-function relationships of these enzymes are under way in
order to better understand their role in lignin degradation by P. eryngii and other Pleurotus species which do not
produce typical LiP.
 |
ACKNOWLEDGMENTS |
We are indebted to Bernard Kurek (INRA, Reims, France) for a
sample of P. chrysosporium MnP. Benjamín
Rodríguez (IQOG, CSIC, Madrid, Spain) is acknowledged for the
facilities used for organic synthesis, Jaime Amézaga is thanked
for preparation of lignin model dimers, Alicia Prieto is thanked for
help with the gas chromatography and MALDI-TOF analyses, Javier Varela
is thanked for protein sequencing, and Angeles Guijarro and Teresa
Raposo are thanked for technical assistance.
L.C. was supported by the Junta Nacional de Investigaçao
Científica e Tecnológica (Portugal) and by the FAIR
Programme of the European Union. This work was supported in part by
European Project AIR2-CT93-1219 (Biological Delignification in Paper
Manufacture) and by the Spanish Biotechnology Programme.
 |
ADDENDUM IN PROOF |
A molecular characterization of peroxidase PL from liquid cultures
of Pleurotus eryngii (Brookhaven Protein Database entry 1A20) has been published recently (F. J. Ruiz-Dueñas, M. J. Martínez, and A. T. Martínez, Mol. Microbiol.
31:223-236, 1999).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Centro de
Investigaciones Biológicas (CIB), Consejo Superior de
Investigaciones Científicas (CSIC), Velázquez 144, E-28006 Madrid, Spain. Phone: 34915611800. Fax: 34915627518. E-mail:
cibm149{at}fresno.csic.es.
 |
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Applied and Environmental Microbiology, March 1999, p. 916-922, Vol. 65, No. 3
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Copyright © 1999, American Society for Microbiology. All rights reserved.
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