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Applied and Environmental Microbiology, June 1999, p. 2446-2452, Vol. 65, No. 6
Division of Industrial Microbiology,
Department of Food Technology and Nutritional Sciences, Wageningen
University, 6700 EV Wageningen, The Netherlands
Received 14 December 1998/Accepted 24 March 1999
The xanthan-degrading bacterium Paenibacillus
alginolyticus XL-1, isolated from soil, degrades approximately
28% of the xanthan molecule and appears to leave the backbone intact.
Several xanthan-degrading enzymes were excreted during growth on
xanthan, including xanthan lyase. Xanthan lyase production was induced
by xanthan and inhibited by glucose and low-molecular-weight enzymatic
degradation products from xanthan. A xanthan lyase with a molecular
mass of 85 kDa and a pI of 7.9 was purified and characterized. The
enzyme is specific for pyruvated mannosyl side chain residues and
optimally active at pH 6.0 and 55°C.
Xanthan, the extracellular
polysaccharide (eps) produced by Xanthomonas campestris, has
many industrial applications as a thickener of aqueous solutions and as
a stabilizer of emulsions, foams, and particulate suspensions. Xanthan
is used in many foods, e.g., juices, drinks, ice cream, salad
dressings, and dry mix formulations such as desserts. The bulk of
xanthan, however, is used for enhancing oil recovery and in the
manufacturing of explosives, paints, polishes, fire-fighting liquids,
and cosmetics (18).
Xanthan has a pentasaccharide repeating unit: the
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
A Pyruvated Mannose-Specific Xanthan Lyase Involved
in Xanthan Degradation by Paenibacillus alginolyticus
XL-1
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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
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INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-1,4-glucan
backbone is substituted on alternate glucosyl residues with a
trisaccharide side chain consisting of
-mannose,
-glucuronic acid, and
-mannose (Fig. 1a). Also
"variant xanthans" with truncated side chains have been described
(2, 25). These variants, consisting of tetrasaccharide or
trisaccharide repeating units (Fig. 1b and c), are produced by X. campestris mutants. Truncation of the side chain affects the
viscometric properties of xanthan. Compared to the polypentamer, the
acetylated polytetramer is a weaker viscosifier (15),
whereas the polytrimer is reported to be a superior viscosifier on a
weight basis (10). However, these variant xanthans,
especially the polytrimer, are produced at low yields (26).
An attractive alternative method to produce xanthans with truncated
side chains could be enzymatic modification of polypentamer xanthan.

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FIG. 1.
Native (a) and mutant xanthan structures (b,
polytetramer; c, polytrimer). The extent of acetylation and pyruvation
varies with bacterial source and culture conditions.
Xanthan-modifying enzymes can be obtained from xanthan-degrading microorganisms. Xanthan-degrading pure cultures (22, 23), as well as mixed cultures (6), have been described. In some cases pure cultures were isolated from mixed cultures but, compared to the mixed cultures, the growth rates and production of xanthan-degrading enzymes were considerably lower (5, 12, 23).
Xanthan lyase is one of the enzymes that can be used for xanthan
modification. This enzyme removes the terminal mannosyl residue via
-elimination, yielding a free mannose and a tetrasaccharide repeating unit as in Fig. 1b; however, with a
4,5-ene-glucuronyl residue on the side chain. Xanthan lyase
activity can easily be monitored by measuring the increase of
A235 caused by the conjugation of the formed C=C
bond with the carboxylate group in the uronic acid residue.
Alternatively, the double bond introduced by xanthan lyase can be
oxidized with periodate. This yields an oxidation product that reacts
with thiobarbituric acid (TBA) to a chromophore at 590 nm
(24). Xanthan lyases were first obtained by Sutherland (23) from a Bacillus sp., a
Corynebacterium sp., and a mixed culture. The action of
these enzymes was independent of the degree of pyruvation and
acetylation of xanthan. Pyruvated mannose-specific xanthan lyases have
been purified from a salt-tolerant mixed culture by Ahlgren
(1) and, very recently, from a Bacillus sp. by
Hashimoto et al. (9).
In this study, the isolation of Paenibacillus alginolyticus XL-1 from an enrichment culture on xanthan is described. This strain was tested for xanthan-degrading enzyme activities. Several xanthan-degrading enzymes were excreted, including a pyruvated mannose-specific xanthan lyase that was purified and characterized.
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MATERIALS AND METHODS |
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Enrichment of xanthan-degrading bacteria.
Xanthan-degrading
bacteria were enriched on mineral salts medium, pH 6.9, with 3 g
of xanthan (Sigma G-1253, practical grade) liter
1.
Mineral salts medium contained the following (in milligrams per liter):
EDTA, 10.0; ZnSO4 · 7H2O, 2.0;
CaCl2 · 2H2O, 1.0; FeSO4 · 7H2O, 5.0;
Na2MoO4 · 2H2O, 0.2;
CuSO4 · 5H2O, 0.2;
CoCl2 · 6H2O, 0.4;
MnCl2 · 4H2O, 1.0;
(NH4)2SO4: 2,000;
MgCl2 · 6H2O, 100;
K2HPO4, 1,550; and
NaH2PO4 · H2O, 850. In a
500-ml Erlenmeyer flask, 100 ml of xanthan medium was inoculated with 1 ml of a 1:1 (wt/vol) mixture of soil and 0.9% (wt/vol) NaCl. The
cultures were incubated with shaking at 30°C, and 1 ml was
transferred daily to 100 ml of fresh medium. After repeated transfers,
pure cultures were isolated and maintained on solid mineral salts
medium containing 5 g of mannose or xanthan liter
1
and yeast extract (0.05 g liter
1, added after autoclaving
from a filter-sterilized 5 g liter
1 stock solution).
Strain and culture conditions.
P. alginolyticus XL-1,
isolated from a mixed culture growing on xanthan, was maintained on
solid xanthan medium supplemented with filter-sterilized yeast extract.
Liquid cultures were incubated at 30°C with shaking, on mineral salts
medium containing 5 g of carbon source and 0.05 g of
filter-sterilized yeast extract liter
1. For enzyme
production, 1 liter of xanthan medium in a 5-liter Erlenmeyer flask was
inoculated with 5 ml of a xanthan-grown overnight culture. After
20 h of incubation, the culture was centrifuged (15,000 × g, 15 min, 4°C), and the supernatant was used for enzyme purification.
Polysaccharides. Practical-grade xanthan was obtained from Sigma (G-1253). Native and chemically modified xanthans (eps of X. campestris X646 and Xanthomonas phaseoli X556, Kelzan [Kelco], and Flocon 4800C [Pfizer]) were kind gifts of Ian Sutherland (Division of Biological Sciences, Institute of Cell and Molecular Biology, University of Edinburgh, Edinburgh, United Kingdom). The capsular polysaccharide of Klebsiella serotype K5 (8) was kindly provided by Harm Snippe (Eijkman-Winkler Institute for Microbiology, Infectious Diseases and Inflammation, Academic Hospital Utrecht, Utrecht, The Netherlands).
Purification of xanthan.
Practical-grade xanthan was
dissolved to 20 g liter
1 in demineralized water, and
17% (vol/vol) ice-cold trichloroacetic acid solution (80% [wt/vol])
was added to precipitate proteins. The mixture was stirred for 20 min
at 4°C and centrifuged (25,000 × g, 15 min, 4°C).
After neutralization of the supernatant with 5 M NaOH, xanthan was
precipitated by adding 3 volumes of ice-cold absolute ethanol. The
precipitate was collected by filtration and dissolved in demineralized
water. After extensive dialysis at 4°C against demineralized water,
the purified xanthan solution was stored at
20°C or lyophilized.
Chemical modification of xanthan.
Pyruvic acetals were
removed from xanthan by using the procedure of Bradshaw et al.
(4). Purified xanthan (5 g liter
1) was heated
at 100°C for 90 min in 5 mM trifluoroacetic acid (TFA). After
dialysis against demineralized water, the preparation was stored at
20°C. Acetyl groups were removed according to the method of
Shatwell et al. (20). Purified xanthan (2.5 g
liter
1) in 0.1 M NH4OH was incubated at
60°C for 1 h. After dialysis, the solution was stored at
20°C.
Preparation of LMW enzymatic degradation products of
xanthan.
To obtain low-molecular-weight (LMW) degradation products
released from xanthan by the enzyme system of P. alginolyticus XL-1, filter-sterilized supernatant (15 ml) of a
xanthan-grown overnight culture was incubated at 30°C with 250 ml of
an autoclaved xanthan solution (10 g liter
1 in 15 mM
phosphate buffer [pH 6.9]). Reducing sugars were measured every 3 to
4 days to monitor xanthan degradation. Between days 13 and 17, the
reducing sugar formation ceased, and the incubation mixture was
centrifuged to remove insoluble xanthan residues. The supernatant was
dialyzed against 300 ml of demineralized water, and the dialysate
containing the LMW fraction was autoclaved for use as a medium component.
1) was
incubated with 50 mU of xanthan lyase for 4 h at 30°C. The reaction mixture was dialyzed against 50 ml of demineralized water. The
dialysate containing the LMW fraction was lyophilized and stored at
20°C.
Xanthan lyase purification.
P. alginolyticus XL-1 was
cultured as described above. The supernatants of 2 cultures (1 liter
each) were pooled, and the extracellular enzymes were concentrated by
ammonium sulfate precipitation (60% saturation). After centrifugation,
the pellet was resuspended in 24 ml of 10 mM Tris (pH 8.0) and
centrifuged to remove insoluble materials. To the supernatant, solid
(NH4)2SO4 was added to a final
concentration of 1 M. Subsequent purification steps were carried out on
an FPLC system (Pharmacia) operated at room temperature. The enzyme
solution was applied to a hydrophobic interaction chromatography (HIC)
column (Pharmacia HiTrap Phenyl Sepharose HP; 1 ml) in 6-ml batches.
Proteins were eluted with a linear gradient of 1 to 0 M
(NH4)2SO4 in 10 mM Tris (pH 8.0) at
a flow rate of 0.5 ml min
1 in a total volume of 10 ml.
The xanthan lyase-containing fractions of four subsequent runs were
pooled and dialyzed overnight at 4°C against 10 mM Tris (pH 8.0).
Subsequently, the HIC pool was applied to an anion-exchange
chromatography (AEC) column (Source 15Q HR 5/5). Proteins were eluted
with a linear gradient of 0 to 0.15 M NaCl in 10 mM Tris (pH 8.0) at a
flow rate of 1 ml min
1 in a total volume of 25 ml.
Xanthan lyase-containing fractions were pooled and stored at
20°C.
Protein electrophoresis. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) was carried out according to the method of Laemmli (14) by using a Hoeffer Mighty Small system (Pharmacia). Gels were stained with Coomassie brilliant blue. Isoelectric focusing (IEF) was carried out on a Phast Gel system (Pharmacia).
Enzyme assays.
To assess total xanthan-degrading enzyme
("xanthanase") activity, equal volumes of culture supernatant and
purified xanthan solution (5 g liter
1 in 15 mM phosphate
buffer [pH 6.9]) were mixed and incubated at 30°C. Samples were
drawn at set intervals and assayed for reducing sugars.
-1,4-Glucanase activity was measured like xanthanase by using
carboxymethyl cellulose (CM-cellulose) instead of xanthan as the
substrate. Similar incubations were carried out to determine enzyme
activity releasing uronic acid-containing fragments from xanthan. In
these samples, high-molecular-weight xanthan residues were precipitated
with 3 volumes of ice-cold absolute ethanol. After centrifugation, the
supernatant containing the LMW degradation products was concentrated by
lyophilization and assayed for uronic acids. To determine glycosidase
activities, equal volumes of culture supernatant and a 10 mM solution
of p-nitrophenyl-D-glycoside (10 mM) were
incubated. Released p-nitrophenol was measured at 410 nm
after the reaction was stopped with 3 volumes of ice-cold 0.2 M
Na2CO3. Xanthan lyase activity was determined
spectrophotometrically in a Perkin-Elmer
-l spectrophotometer.
Xanthan lyase (100 µl of crude enzyme or 0.5 to 1 µg of purified
enzyme) was added to 500 µl of purified xanthan solution (0.05 g
liter
1 in 15 mM phosphate buffer [pH 6.9]) and mixed
quickly, and the A235 value was recorded
continuously. One unit of xanthan lyase activity is defined as the
amount of enzyme that forms 1 µmol of 4,5-ene-glucuronyl
residues per minute (
235 = 8.0 cm2
µmol
1). To determine the optimal pH for xanthan lyase,
activity was measured as described above but xanthan was dissolved in
McIlvaine buffer of different pH values. Tenfold-concentrated McIlvaine buffer was prepared by mixing 0.1 M citric acid and 0.2 M
Na2HPO4 to obtain the desired pH. To assess the
thermal stability of xanthan lyase, the purified enzyme was diluted to
40 µg ml
1 in McIlvaine buffer at pHs 5, 6, and 7. The
enzyme solutions were incubated for 15 min at different temperatures
and immediately stored on ice. Subsequently, activity was measured
according to the standard procedure.
Determination of
235 of the xanthan lyase reaction
product.
Purified xanthan lyase (150 mU) was incubated with 1.2 ml
of purified xanthan (6 g liter
1). Both
A235 and the reducing sugar concentration
relative to a mannose standard were measured at set intervals. The
A235 was measured after inactivating the enzyme
with 0.5 volume of 5 M NaOH and an appropriate dilution with water.
A235 was plotted against the concentration of
reducing sugars, and from the slope an
235 of 8.0 cm2 µmol
1 was determined.
Calculation of xanthan degradation. To determine the extent of xanthan degradation by P. alginolyticus XL-1, the bacterium was cultured in closed 500-ml serum bottles containing 40 ml of xanthan medium. Total sugar, reducing sugar, CO2 evolution, and biomass formation were monitored during incubation. The following assumptions were made to be able to calculate xanthan degradation on a C-mol basis: the number of xanthan repeating units equals the total sugar content, corrected for the reducing (i.e., nonpolysaccharide) sugars, divided by 5; the average molecular formula for a xanthan repeating unit is C32.7H48.9O26.8 (molar mass, 869.3 g; 96% acetylation and 26% pyruvation; see Table 3); the carbon content of the biomass is 50% (wt/wt); and the reducing sugars released are hexoses.
Analytical procedures. The growth of P. alginolyticus XL-1 on xanthan was monitored by measuring CO2 evolution in closed 500-ml serum bottles containing 40 ml of medium with an HP 6890 gas chromatograph (Hewlett-Packard) equipped with a Poraplot Q column (25 m). Growth on carbon sources other than xanthan was determined by measuring the optical density at 660 nm. Dry biomass was measured gravimetrically after the cells were collected by centrifugation, washed twice with demineralized water, and dried overnight at 110°C.
Protein was measured by using the bicinchoninic acid protein assay kit (Pierce) according to the supplier's instructions. Reducing sugars were determined with the dinitrosalicylic acid method of Miller (16) by using glucose or mannose as the standard. Total sugar was determined with the phenol-sulfuric acid method of Dubois et al. (7) by using glucose as the standard. Uronic acids were determined by the method of Blumenkrantz and Asboe-Hansen (3) with glucuronic acid as the standard. For qualitative determination of 4,5-ene-glucuronyl residues formed by xanthan lyase, the TBA method of Weissbach and Hurwitz (27) was used. Glucose was determined enzymatically with the Boehringer Mannheim D-glucose test kit according to the supplier's instructions. To determine the pyruvate content of xanthan, xanthan (1 g liter
1) was hydrolyzed in 1 M HCl for 1.5 h at
100°C. Subsequently, free pyruvate was determined enzymatically by
using the Sigma Diagnostics pyruvate kit according to the supplier's
instructions. The acetyl content of xanthan was determined by the
method of Hestrin (11) with acetylcholine as the standard.
Thin-layer chromatography (TLC) of the LMW xanthan lyase product was
carried out on silica gel plates (Merck Kieselgel 60 F254).
The eluent was 2-propanol-acetone-1 M lactic acid (2:2:1). For the
detection of sugars, the plates were sprayed with phenol-sulfuric acid
reagent (3 g of phenol and 5 ml of concentrated sulfuric acid in 95 ml
of ethanol) and heated at 110°C for 5 to 10 min.
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RESULTS |
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Isolation of a xanthan lyase-producing P. alginolyticus.
Microorganisms were enriched from soil samples in liquid medium with
xanthan as the sole source of carbon and energy. After repeated
transfers, a xanthan-degrading mixed culture was obtained that grew to
a high optical density within 24 h. The presence of xanthan lyase
activity in the supernatant of the mixed culture was demonstrated by
incubating the supernatant with xanthan and measuring an increase of
the A235 as well as the formation of TBA-reactive material. No
-1,4-glucanase activity was observed.
Xanthan utilization by P. alginolyticus XL-1.
When
plates with strain XL-1 on solid medium with xanthan were stained with
Congo red, red haloes were observed around the colonies, indicating the
presence of
-1,4-glucan. This suggested that long stretches of the
xanthan backbone remained intact whereas the side chains were removed,
exposing the backbone and allowing interaction with Congo red. To
determine the extent of xanthan degradation, P. alginolyticus XL-1 was cultured on xanthan in liquid medium, and
total amounts of sugar, reducing sugar, CO2 evolution, and
biomass formation were monitored during incubation. CO2
evolution stopped after 24 h, but the incubation was carried on
for another 72 h to allow growth-independent xanthan degradation to proceed to completion.
Production of xanthan-degrading enzymes by P. alginolyticus XL-1.
P. alginolyticus XL-1 produces
various xanthan-degrading enzyme activities. Table
1 summarizes the activities observed in the supernatant of a 20-h culture of P. alginolyticus XL-1
grown on xanthan. Xanthan lyase activity could be detected with
unmodified, depyruvated, and deacetylated xanthan as substrates. Also
LMW compounds reacting as uronic acids were released from xanthan upon
incubation with culture supernatant. These compounds could be either
uronic acids or uronic acid-containing oligosaccharides.
-1,4-Glucanase,
-mannosidase,
-mannosidase,
-glucuronidase, and
-glucosidase activities could not be detected.
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1) was added to two cultures of
P. alginolyticus XL-1 growing exponentially on mannose.
Figure 2A shows that xanthan lyase
production started 2 h after the addition of xanthan. At 4 h
after the addition of xanthan, glucose (0.25 g liter
1)
was added to one of the induced cultures, causing an immediate stop in
xanthan lyase production. When glucose was exhausted, xanthan lyase
production started again. In the induced culture without additional
glucose, xanthan lyase production stopped 6 h after the addition
of xanthan, although growth continued. In the control culture without
xanthan, a small amount of xanthan lyase activity was produced toward
the end of the exponential growth phase.
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1), or both
xanthan and LMW xanthan degradation products to log-phase cultures of
P. alginolyticus XL-1 growing on mannose. Figure 2B shows
that rather than having an inducing effect, the enzymatic xanthan-hydrolysate appeared to inhibit xanthan lyase production. In
the culture with only LMW xanthan degradation products, xanthan lyase
was not produced above the level in the control culture without
additional potential inducers.
Xanthan lyase purification.
Xanthan lyase was purified 26-fold
from 2 liters of culture supernatant. The enzyme eluted from the Phenyl
Sepharose column at approximately 0.7 M
(NH4)2SO4 in three fractions. The
enzyme eluted from the Source 15Q column at approximately 0.05 M NaCl in a single peak at A280 in two subsequent
fractions. The purification results are summarized in Table
2. SDS-PAGE and subsequent staining of
the gel with Coomassie brilliant blue showed a single band (Fig.
3). The molecular mass was estimated to
be 85 kDa compared to the relative mobilities of the protein standards
in the SDS-PAGE gel. IEF showed a single band at pH 7.9.
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Properties of purified xanthan lyase. The purified xanthan lyase was active over a broad pH range with an optimum at pH 6.0. The optimum temperature for xanthan lyase was 55°C. Figure 4 shows, however, that the enzyme was not stable at temperatures higher than 45°C. The enzyme was a little more stable at acidic pH values, but at 55°C enzyme activity was lost at all pH values tested.
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(1
4)GlcA
bond of the xanthan side chain in
its backbone (8), but it was not a substrate for xanthan
lyase. No xanthan lyase activity could be detected on chemically
depyruvated xanthans (Table 3). The
enzyme was active on chemically deacetylated Sigma xanthan, as well as
on xanthan that is naturally low in acetyl content (Flocon 4800C and
X556-eps). However, the enzyme was not active on deacetylated X646-eps.
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DISCUSSION |
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The xanthan-degrading bacterium P. alginolyticus XL-1 was isolated from a mixed culture growing on xanthan. This organism requires both thiamine and biotin for growth. Since the organism proliferated in the mixed culture without the addition of biotin and thiamine, it is likely that these compounds were provided by other organisms. This phenomenon may explain other researchers' findings that the growth rate and the production of xanthan-degrading enzymes are greatly reduced when pure xanthan-degrading cultures are separated from the mixed cultures they originated from (5, 6, 12, 23). Possibly, these mixed cultures also produced some growth factor required by the xanthan degraders. Alternatively, two or more strains may have acted concertedly in xanthan degradation.
Xanthan is not degraded to completion by P. alginolyticus
XL-1. The formation of Congo red-stainable material around colonies on
agar plates with xanthan and the semisoluble, slime-like material observed in liquid cultures indicate that the enzymes excreted by
strain XL-1 only remove residues from the xanthan side chains, whereas
long stretches of the
-1,4-glucan backbone remain intact. As only
28% of xanthan C was recovered as CO2, biomass, or
reducing sugars, the side chains are apparently removed only partially.
The outer side chain mannosyl residue can be removed either by a
xanthan lyase or a
-mannosidase. Only xanthan lyase activity was
detected in the culture supernatant, but it cannot be excluded that a
-mannosidase is produced that is not active on
p-nitrophenyl-
-D-mannoside. Extracellular
xanthan lyase production by strain XL-1 is induced by xanthan and
repressed by glucose. Also, LMW enzymatic degradation products of
xanthan inhibited rather than induced xanthan lyase production.
Possibly, the true xanthan lyase inducer is an intermediate enzymatic
degradation product of xanthan (e.g., an oligosaccharide) that is
further converted by other degrading enzymes to a repressor (e.g., a
monosaccharide). This would explain the inhibiting effect of
LMW-xanthan degradation products: degradation has proceeded to such an
extent that all inducer has been converted to repressor. In cultures
with xanthan as inducer, xanthan lyase production stopped after a
relatively short period of time, while exponential growth continued.
This may also be explained by the conversion of an inducing xanthan
fragment to a repressor over time, resulting in a stop in xanthan lyase production.
The purified xanthan lyase of strain XL-1 is different from the xanthan lyases described by Ahlgren (1) and Sutherland (23) in a number of respects. The Paenibacillus enzyme (molecular mass, 85 kDa) is much larger than these xanthan lyases, which had a molecular mass in the range of 30 to 33 kDa. The optimal pH is in between the values reported for these enzymes: pH 7.25 for the Bacillus enzyme (23) and pH 5 for the xanthan lyase from the mixed culture (1). The pI of 7.9 is much higher than the pI of the xanthan lyase purified by Ahlgren (1) (pI 3.7). Furthermore, the xanthan lyase from P. alginolyticus XL-1 is not as salt tolerant as the enzyme described by Ahlgren (1), which is not surprising since strain XL-1 was not selected for its salt tolerance. The xanthan lyase of P. alginolyticus XL-1 is more similar to the recently described xanthan lyase of Bacillus sp. strain GL1 (9). The molecular mass of this enzyme is in the same order of magnitude (75 kDa), and the optimal pH (5.5) is near that of the Paenibacillus enzyme (pH 6.0). There are, however, also differences: the Paenibacillus enzyme is more stable at higher temperatures. Furthermore, the Paenibacillus xanthan lyase is not affected by 1 mM CoCl2, MgCl2, CaCl2, or 10 mM EDTA, whereas the Bacillus sp. strain GL1 xanthan lyase was stimulated by CoCl2 and inhibited by the other compounds. On the other hand, CuCl2 and HgCl2 had a much stronger inhibiting effect on the Paenibacillus enzyme.
Like the other xanthan lyases described in the literature, the Paenibacillus enzyme was active on intact, nondepolymerized xanthan. The enzymes described by Ahlgren (1) and Hashimoto et al. (9), however, probably act in conjunction with depolymerases. Also, the lyases described by Sutherland (23) were associated with endoglucanases and showed a higher activity on xanthan-derived oligosaccharides than on intact xanthan. The Paenibacillus xanthan lyase was not found to be associated with endoglucanases either in the pure culture or in the mixed culture from which strain XL-1 originated. Therefore, the true substrate for this xanthan lyase is probably intact xanthan.
Like the enzyme described by Ahlgren (1) and Hashimoto et al. (9), the purified xanthan lyase is specific for pyruvated mannosyl residues. The LMW fraction released by xanthan lyase from xanthan contained a little more mannose than pyruvate and on TLC plates a slight mannose spot in the untreated sample was visible. Possibly, xanthan lyase releases a small amount of unpyruvated mannose from xanthan during prolonged incubation. However, the purified enzyme showed no activity at all on chemically depyruvated xanthans. Therefore, it is clear that the enzyme prefers pyruvated xanthan to nonpyruvated xanthan. Unexpectedly, xanthan lyase was not active on pyruvated, deacetylated X646-eps. It is not likely that the acetyl group is required for activity, since the enzyme was active on xanthans that are originally low in acetyl substituents as well as on chemically deacetylated Sigma xanthan. Possibly, the deacetylated X646-eps has adopted a structure which renders the pyruvated side chains inaccessible to xanthan lyase. The Klebsiella K5 polysaccharide was not a substrate, suggesting that the purified xanthan lyase is a true "exolyase."
In chemically depyruvated xanthans, ca. 12% of the repeating units are still pyruvated. Apparently, the pyruvate groups were removed incompletely by the acid hydrolysis treatment, which was mild to prevent the cleavage of glycosidic bonds. However, the purified xanthan lyase was not active on these substrates despite the presence of pyruvate groups. Possibly, removal of pyruvate groups was incomplete because parts of the polysaccharide molecules are inaccessible to H+ molecules, e.g., due to aggregate formation. If so, it would also be unlikely that enzymes can act on these parts of the polysaccharide molecules.
The 4,5-ene-glucuronyl residue in the xanthan side chain
resulting from xanthan lyase activity is identical to the
4,5-ene-galacturonyl residue that is formed by pectate lyase
in pectate oligomers. The
235 for the
4,5-ene-glucuronyl residue determined in this study (8.0 cm2 µmol
1) is, however, higher than the
values reported for products of pectate lyase, i.e., 4.6 (13) and 5.2 (17) cm2
µmol
1. This difference is probably due to the different
molecular environments that surround the 4,5-ene-glucuronyl
residue in modified xanthan and in pectate-derived oligomers, respectively.
With the xanthan lyase described here, the pyruvated mannosyl residues
of xanthan side chains are preferentially removed, resulting in a
modified xanthan consisting of tetrameric and pentameric repeating
units. Obviously, the extent of modification is dependent on the extent
of pyruvation of xanthan. Most xanthans are pyruvated to ca. 30%;
therefore, if complete conversion to a polytetramer is desired, a
second xanthan lyase or a
-mannosidase is required that is either
specific for nonpyruvated mannosyl residues or nonspecific. Strain XL-1
probably produces a second xanthan lyase as the crude culture broth
exhibited xanthan lyase activity with chemically depyruvated xanthan as
a substrate (see Table 1). To further modify the tetrameric repeating
units formed by xanthan lyase to trimers, an enzyme removing the
unsaturated uronic acid residue is required. Such an enzyme, a
"4,5-ene-
-D-glucuronidase," has to our
knowledge not yet been described in the literature. Since an enzyme
activity releasing uronic acid(-containing fragment)s from xanthan was
detected in the culture supernatant (see Table 1), it may be possible
that strain XL-1 produces such an enzyme. Considering the various
xanthan-degrading enzyme activities produced by P. alginolyticus XL-1, we think this strain is a valuable source of
enzymes for structural modifications of xanthan.
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ACKNOWLEDGMENTS |
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We thank Ian Sutherland for his generous gift of xanthan samples with different pyruvate and acetate contents and Harm Snippe for kindly providing the Klebsiella K5-cps. We thank André Pots for his assistance with IEF and Joost Wijnen for identification of the vitamins required for growth of P. alginolyticus XL-1.
This research was financially supported by ABON (Association of Biotechnological Research Centres in The Netherlands).
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FOOTNOTES |
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* Corresponding author. Mailing address: Division of Industrial Microbiology, Department of Food Technology and Nutritional Sciences, Wageningen University, P.O. Box 8129, 6700 EV Wageningen, The Netherlands. Phone: 31-317484980. Fax: 31-317484978. E-mail: Harald.Ruijssenaars{at}imb.ftns.wau.nl.
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