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Applied and Environmental Microbiology, June 1999, p. 2570-2576, Vol. 65, No. 6
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Purification and Characterization of a
Keratinolytic Serine Proteinase from Streptomyces
albidoflavus
Philippe
Bressollier,1
François
Letourneau,1
Maria
Urdaci,2 and
Bernard
Verneuil1,*
Laboratoire de Génie Enzymatique et
Biovalorisation (Unité du Laboratoire de Chimie des
Substances Naturelles), I.U.T., Département de Génie
Biologique, Limoges,1 and Laboratoire
de Microbiologie et Biochimie Appliquée, E.N.I.T.A.,
Bordeaux,2 France
Received 13 October 1998/Accepted 26 March 1999
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ABSTRACT |
Streptomyces strain K1-02, which was
identified as a strain of Streptomyces albidoflavus,
secreted at least six extracellular proteases when it was cultured on
feather meal-based medium. The major keratinolytic serine proteinase
was purified to homogeneity by a two-step procedure. This enzyme had a
molecular weight of 18,000 and was optimally active at pH values
ranging from 6 to 9.5 and at temperatures ranging from 40 to 70°C.
Its sensitivity to protease inhibitors, its specificity on synthetic
substrates, and its remarkably high level of NH2-terminal
sequence homology with Streptomyces griseus protease B
(SGPB) showed that the new enzyme, designated SAKase, was homologous to
SGPB. We tested the activity of SAKase with soluble and fibrous
substrates (elastin, keratin, and type I collagen) and found that it
was very specific for keratinous substrates compared to SGPB and
proteinase K.
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INTRODUCTION |
Actinomycetes, particularly
streptomycetes, are known to secrete multiple proteases into the
culture medium (14). Some of these proteases, the serine
proteases of Streptomyces griseus (1, 16, 17, 28)
and Streptomyces fradiae (11, 18, 35), have been
characterized structurally and enzymatically. There also have been many
descriptions of isolation and partial characterization of alkaline
protease activities from other members of the genus
Streptomyces (2, 5, 6, 29, 39).
In these prokaryotic microorganisms, extracellular proteases are
involved mainly in hydrolysis of large polypeptide substrates into
smaller molecular entities which can subsequently be absorbed by the
cells (8). The physiological role of extracellular proteases in differentiation of some Streptomyces species
(22) has been demonstrated previously. These enzymes usually
have low levels of substrate specificity and can degrade most
nonstructural proteins (23, 31). Some of the excreted
proteinases, the keratinases, have the ability to degrade native
keratin and other insoluble proteins (2). The mechanical
stability of keratin and its resistance to microbial degradation depend
on tight packing of the protein chains in
-helix (
-keratin) or
-sheet (
-keratin) structures and linkage of these structures by
cystine bridges. Keratinases may have a use in biotechnological
valorization of keratin-containing wastes, like feathers or hair, as
well as in the leather industry, in which they may have potential in
the development of nonpolluting processes (26).
Previously (20), during a search for novel keratinases, we
detected strong keratinolytic activities in the culture medium of a
Streptomyces strain (strain K1-02) isolated from
hen house soil and grown on feather meal as the sole source of carbon
and energy.
In this study we identified Streptomyces strain
K1-02, and then we purified and characterized the secreted
keratinase. The ability of this enzyme to degrade keratin-based
substrates selectively, which was greater than the ability of S. griseus protease B (SGPB) or proteinase K to degrade such
substrates, and the behavior of the enzyme under various environmental
conditions are discussed below.
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MATERIALS AND METHODS |
Microorganism and growth conditions.
A culture was grown in
a basal salt medium supplemented with feather meal as described by
Letourneau et al. (20). Keratinolytic enzymes were produced
by a culture in a 2-liter stainless steel-glass fermentor (S.G.I.
Instruments, Paris, France) that had a 1-liter working volume, was kept
at 30°C, and was agitated at 500 rpm. Air was supplied at a rate of
60 liters · h
1. The fermentor was inoculated with
106 spores · ml
1, and the peak of
exogenous keratinolytic activity occurred within 30 h. The culture
was centrifuged at 4°C and 10,000 × g for 30 min in
order to harvest the keratinase-containing supernatant.
PCR amplification of the 16S rDNA and sequence
determination.
A PCR was performed in order to amplify the 16S
ribosomal DNA (rDNA) of the Streptomyces strain. The primers
used were direct and reverse primers 5' AGAGTTTGATCCTGGCTCAG 3'
and 5' GGTTACCTTGTTACGACTT 3'; this primer pair has
been shown to amplify the maximum number of nucleotides in 16S rDNA
from a wide variety of bacterial taxa (37). The PCR was
performed as previously described (30) by using a DNA
thermal cycler (model Own-E; Hybaid). Oligonucleotides were synthetized
by Eurogentec (Seraing, Belgium). The DNA sequences of the PCR products
were determined by using a Taq Dye Deoxy terminator cycle
sequencing kit (Perkin-Elmer, Foster City, Calif.) and the protocol
recommended by the supplier. Sequencing reaction products were analyzed
with a model 373A automated DNA sequencer (Applied Biosystems, Foster,
City, Calif.). Databases (GenBank, EMBL, etc.) were searched for
sequences similar to the 16S rRNA gene sequence obtained.
Enzyme purification.
Following centrifugation of the
culture, the supernatant was filtered through a 0.45-µm-pore-size
membrane filter (Millipore Corp., Bedford, Mass.). The filtrate was
concentrated 10-fold with a spiral cartridge concentrator (model CH2;
Amicon Div., W. R. Grace and Co., Beverley, Mass.); the molecular
weight cut-off value for the membrane filter was 10,000. The
lyophilized retentate was dissolved in 20 mM Tris-HCl buffer (pH 8.0)
and applied to a DEAE-cellulose column (5 by 40 cm; Whatman, England).
The column was eluted at a rate of 5 ml · min
1
with 20 mM Tris-HCl (pH 8.0), and this was followed by step elution with 1 M NaCl in the same buffer. Fifty-milliliter fractions were collected and screened for keratinolytic activity with the keratin azure assay. Fractions that eluted with the running buffer and exhibited keratinase activity were pooled, dialyzed overnight at 4°C,
lyophilized, dissolved in 20 mM
3-(N-morpholino)propanesulfonic acid (MOPS) buffer (pH 7.2),
and placed on a carboxymethyl Accel Plus column (1.5 by 20 cm; Waters
Div., Millipore Corp.). The column was eluted at a rate of 2 ml
· min
1 with 20 mM MOPS buffer (pH 7.2), and this was
followed by elution with a linear 0 to 0.5 M NaCl gradient in the same
buffer. Two-milliliter fractions were collected and tested for
activity. Active fractions that eluted with the NaCl gradient were
pooled, dialyzed, and lyophilized.
Protein determination.
The protein content was determined by
the Bradford method (4) by using the Bio-Rad assay reagent
(Bio-Rad, Munich, Germany) and bovine serum albumin as the standard.
Electrophoretic methods. (i) Examination of purity and estimation
of the molecular weight of the keratinase.
Sodium dodecyl sulfate
(SDS)-polyacrylamide gel electrophoresis (PAGE) was performed with 12%
polyacrylamide gels as described by Laemmli (19). Molecular
weight markers (molecular weights, 14,000 to 170,000; Boehringer,
Mannheim, Germany) were included, and the gels were silver stained.
(ii) Zymogram.
To prepare a zymogram, proteinase samples
were mixed with electrophoresis sample buffer without heat denaturation
prior to electrophoresis. SDS-PAGE was carried out at 4°C by using a
12% polyacrylamide gel. After electrophoresis, the gel was washed with
2.5% (vol/vol) Triton X-100 for 30 min and then with 50 mM Tris-HCl
(pH 8.5) for 30 min. Gelatin (2%, wt/vol) in 50 mM Tris-HCl buffer (pH
8.5) was then poured onto the gel slab containing proteases. After
3 h of incubation at 40°C, the gel was stained with Coomassie brilliant blue R-250 and then destained. Protease bands appeared as
clear zones on a blue background.
Determination of enzyme activities. (i) Assay of protease
activity with insoluble keratin azure.
Protease samples were
incubated with 4 mg of keratin azure (Sigma-Aldrich Chimie, St. Quentin
Fallavier, France) in 1 ml of 50 mM Tris-HCl buffer (pH 8.5) at 50°C
for 1 h with constant agitation at 900 rpm by using a Labnet
orbital agitator (Bioblock, Illkirch, France). One unit of proteinase
activity was defined as the amount of enzyme that resulted in an
increase in absorbance at 595 nm (A595) of 0.01 U after reaction with keratin azure for 1 h.
(ii) Assays of protease activities with other insoluble and
soluble substrates.
Proteolytic activities were also determined by
using washed commercial feather meal (Point S.A., Viriat, France), type
I collagen from bovine Achilles tendon (Sigma-Aldrich Chimie), soluble
keratin obtained by heat treatment in dimethyl sulfoxide (DMSO) as
described by Dozie et al. (10), Hammersten casein, and
gelatin as substrates. Purified proteinase (1.3 µg) was incubated
with 0.5% (wt/vol) substrate in 50 mM Tris-HCl buffer (pH 8.5), and
the final volume was adjusted to 1 ml.
Assays were carried out at 50°C with constant agitation at 900 rpm
for 30 to 120 min. The reactions were stopped by adding 5 µl of 10 M
acetic acid. After centrifugation at 4°C and 10,000 × g for 10 min, 0.5 ml of each reaction mixture was added to 0.5 ml
of 0.2 M sodium acetate buffer. After 1 ml of ninhydrin reagent (Sigma-Aldrich Chimie) was added, the free amino groups were measured by the procedure of Moore (24) at 570 nm.
One proteolytic unit was defined as the amount of enzyme that released
1 µmol of glycine after reaction with fibrous keratin, type I
collagen, soluble keratin, or gelatin as the substrate for 1 h.
Influence of temperature and pH on enzyme activity and
stability.
We determined the keratinase activities at various
temperatures between 30 and 80°C in 50 mM Tris-HCl buffer (pH 8.5).
Five milligrams of washed and autoclaved feather meal was suspended in
0.99 ml of buffer, and then after a temperature equilibrium was
reached, 0.01 ml of purified protease (1.3 µg of protein) was added.
After 30 min of incubation with constant agitation at 900 rpm, the
reaction mixture was centrifuged at 10,000 × g for 10 min at 4°C, and then the A280 of the
supernatant was determined by using an appropriate blank.
The thermostability of the keratinase was investigated by measuring the
residual activities at 50°C with the same assay after the enzyme was
incubated for 1 h at various temperatures between 30 and 80°C in
50 mM Tris-HCl buffer (pH 8.5) in the presence or absence of 2 mM
CaCl2.
The optimum pH and pH stability of the keratinase were determined at
50°C by using pH values between 4 and 12; washed, autoclaved feather
meal was used as the substrate. To determine the optimum pH, 5 mg of
feather meal was added to 0.99 ml of a buffer containing phosphoric
acid, acetic acid, boric acid, citric acid, barbital, and NaOH, and
then the preparation was equilibrated at 50°C. Ten microliters of
purified proteinase was added, and the preparation was incubated for 30 min with constant agitation. After centrifugation, the
A280 of the supernatant was determined by using
an appropriate blank.
pH stability was studied by measuring the residual activities at pH
8.5, with the same assay after the enzyme was incubated at various pH
values between 4 and 12 at 25°C for 24 h.
NH2-terminal amino acid sequence.
The N-terminal
sequence of the purified keratinase was analyzed at the Institut de
Biologie et Chimie des Protéines (Lyon, France) by automated
Edman degradation performed with a liquid phase sequence analyzer
(model 473; Applied Biosystems).
Effects of proteinase inhibitors, organic solvents, detergents,
reducing agents, and ionic strength on keratinase activity.
Enzyme
samples containing 1.3 µg of purified keratinase in 0.9 ml of
Tris-HCl buffer (pH 8.5) were incubated at room temperature for 15 min
with the following inhibitors: 0.1 to 1 mM phenylmethylsulfonyl fluoride (PMSF); 1 mM p-chloromercuribenzoate; 10 mM EDTA; 1 to 10 mM 1,10-phenanthroline; 0.1 mM
tosyl-L-lysylchloromethylketone; 0.1 mM
tosyl-L-phenylalanylchloromethylketone (TPCK); and 2 µM pepstatin. After 15 min of incubation, 5 mg of keratin azure was added
to each preparation, and the residual activity of the enzyme was
measured as described above.
One-milliliter enzyme samples (1.3 µg of purified proteinase) in 50 mM Tris-HCl buffer (pH 8.5) containing DMSO (1 to 10%, vol/vol),
isopropanol (1 to 15%, vol/vol), acetonitrile (10 to 50%, vol/vol),
dithiothreitol (DTT) (0.1 to 0.5%, wt/vol), Triton X-100 (0.2 to
0.5%, vol/vol), SDS (0.1 to 0.5%, wt/vol) or sodium chloride (0.05 to
1 M) were incubated for 15 min at room temperature. Five milligrams of
keratin azure, soluble keratin, or feather meal was added to each
preparation, and the residual enzyme activity was measured as described above.
Enzyme kinetic measurements with synthetic substrates.
Most
synthetic p-nitroanilide (pNA) peptides (Sigma-Aldrich
Chimie) used in this study were prepared as stock solutions
(concentration, 10 to 100 mg · ml
1, depending on
the peptide) in DMSO for
N-succinyl-p-nitroanilide derivatives (N-Suc-pNA
derivatives) or in isopropanol for
N-benzoyl-p-nitroanilide peptides (Bz-pNA
peptides); the stock solution Bz-Arg-pNA (concentration, 10 mg · ml
1) was prepared in Tris-HCl buffer (pH 8.5). The final
concentrations of these solvents in reaction mixtures never exceeded
5% (vol/vol). At least five concentrations of most of the synthetic
substrates were assayed at 45°C with 0.73 × 10
7 M
keratinase (molecular mass, 18 kDa, as determined by SDS-PAGE) in 50 mM
Tris-HCl (pH 8.5) buffer; the only exceptions were the Suc-(Ala)2-Pro-Phe-pNA and Bz-Phe-Val-Arg-pNA reaction
mixtures, in which the protease concentrations were 1.1 × 10
9 and 7.2 × 10
9 M, respectively.
The hydrolysis of peptides was monitored continuously for pNA release
at 410 nm for 5 min by using a Uvikon 930 spectrophotometer (Kontron
Instruments, Schlieren, Switzerland). The initial velocities were then
determined, and the steady-state kinetic parameters were calculated by
using a Lineweaver-Burk plot and the molar absorption coefficient for
pNA determined under our experimental conditions (
= 8,800 liters · mol
1 · cm
1). When
Bz-Pro-Phe-Arg-pNA and Suc-(Ala)2-Val-pNA were used as the
substrates, the occurrence of hydrolysis products other than pNA was
monitored by high-performance liquid chromatography performed with a
high-performance liquid chromatography system (Kontron Instruments).
One hundred-microliter portions of reaction mixtures obtained after 20, 40, 60, and 180 min of incubation of each of the two peptides with
purified keratinase were loaded onto a type RP.18 Lichrospher 5µm Si
100 column (4.6 by 125 mm); Merck, Darmstadt, Germany). The samples
were eluted at a rate of 1 ml · min
1 by using a
linear 5 to 80% acetonitrile gradient in H2O containing 0.1% trifluoroacetic acid (TFA) at 25°C. The elution pattern was monitored at A220, and each hydrolysis product
was collected; the amino acid content of each product was determined by
the Waters Pico.Tag method (9) after acid hydrolysis.
 |
RESULTS |
Streptomyces strain identification.
Strain
K1-02 was tentatively identified on the basis of its
phenotypic and physiological characteristics (20, 38). In order to confirm the identity, a partial 16S rDNA sequence (1,266 bp) was determined. A search of databases for similar sequences pointed
to the genus Streptomyces. The 16S rDNA sequence of strain K1-02 differed from the 16S rDNA sequences of
Streptomyces albidoflavus (accession no. Z76676) and
Streptomyces sampsonii (accession no. Z76680) by only
two nucleotides (99.8% similarity). Our sequence differed from the
sequences of other Streptomyces species by 18 nucleotides (Streptomyces intermedius; 98.6% similarity), 27 nucleotides (Streptomyces eurythermus; 97.9%
similarity), 51 nucleotides (Streptomyces galbus; 96%
similarity), 66 nucleotides (S. griseus; 94.8% similarity),
and more than 51 nucleotides (38 other Streptomyces
species). We concluded that strain K1-02 is a strain of
Streptomyces albidoflavus.
Extracellular proteases of S. albidoflavus
K1-02.
S. albidoflavus K1-02 was
grown as described previously (20) on 1% feather meal basal
medium. Under these conditions, at least six extracellular
proteases were produced, as determined by a zymogram on gelatin (Fig.
1). Four of these six enzymes were inhibited in the presence of 10 mM EDTA, and no residual activity was observed in the presence of both 1 mM PMSF and 10 mM EDTA.

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FIG. 1.
Zymogram analysis of proteases excreted by S. albidoflavus. Track 1, crude culture supernatant; track 2, supernatant treated with 10 mM EDTA; track 3, supernatant treated with
10 mM EDTA plus 1 mM PMSF.
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Purification of the keratinolytic protease.
The method
used to purify the enzyme from the culture medium is summarized
in Table 1. The concentrated crude enzyme
was first applied to a DEAE-cellulose anion-exchange column. The
unbound fraction contained 48% of the total keratinolytic
activity. After concentration, this sample was subjected to
carboxymethyl cation-exchange chromatography, and the
protein-containing keratinolytic activity peak eluted with 0.17 M NaCl.
SDS-PAGE analysis of this purified peak revealed a single band
(Fig. 2), indicating that the keratinase was purified to homogeneity. The overall purification factor was about 26-fold, and the final yield was 37%. The final product had a
specific activity of about 17,600 U · mg
1.

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FIG. 2.
SDS-PAGE of purified keratinase. Lane 1, molecular mass
marker proteins ( 2 macroglobulin, 170 kDa;
-galactosidase, 116.4 kDa; fructose-6-phosphate kinase, 85.2 kDa;
glutamate dehydrogenase, 55.6 kDa; aldolase, 39.2 kDa; triosephosphate
isomerase, 26.6 kDa; trypsin inhibitor, 20.1 kDa; lysozyme, 14.3 kDa);
lane 2, crude enzyme preparation; lane 3, purified keratinase.
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Molecular mass of the protease.
The subunit molecular mass of
the protease was estimated by comparing the electrophoretic
mobility of the protease with the electrophoretic mobilities of marker
proteins (Fig. 2). The apparent molecular mass was 18 kDa.
NH2-terminal amino acid sequence.
A total of 31 residues of the NH2-terminal amino acid sequence were
determined (Fig. 3). The sequence
obtained exhibited considerable homology with the sequences SGPB (96%)
(17) and SGPA (58%) (16). The level of homology
with the S. fradiae SFase-2 sequence was 23%
(18).

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FIG. 3.
Alignment of the N-terminal sequences of S. albidoflavus serine protease (S.albid.prot.), SGPB,
SFase-2, SGPA, and SGPD. Boldface type indicates residues that are
different. The data for SGPB were obtained from reference
17, the data for SFase-2 were obtained from
reference 18, the data for SGPA were obtained from
reference 16, and the data for SGPD were obtained
from reference 33.
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Effects of temperature and pH on the activity and stability of the
proteinase.
The enzyme was active at a broad range of temperatures
(40 to 70°C) and a broad range of pH values (pH 6 to 9.5); the
optimum temperature and optimum pH were 60°C and pH 7.5, respectively. The enzyme was stable at pH 7 to 12, and more than 90%
of the maximal activity was conserved at these pH values. The
temperature stability of the enzyme was examined at temperatures up to
50°C in the absence of CaCl2 (80% residual activity
after 1 h; measured half-life, 2 h). The temperature
stability could be increased by adding 2 mM CaCl2 (which
increased the half-life at 60°C 12-fold, to 72 min, compared with 6 min without CaCl2; CaCl2 did not increase the
enzyme activity).
Effects of proteinase inhibitors on activity.
The effects of
various synthetic and naturally occurring protease inhibitors on the
proteolytic activity of S. albidoflavus keratinase (SAKase)
were examined. The enzyme was completely inhibited by the serine
proteinase inhibitor PMSF at a concentration of 0.1 mM and was slightly
affected by a metalloproteinase inhibitor, such as 1,10-phenanthroline,
at a concentration of 10 mM. None of the other specific serine
proteinase inhibitors tested
(tosyl-L-lysylchloromethylketone, TPCK, and pepstatin) had
a significant influence on the keratinase activity.
Effects of solvents, detergents, reducing agents, and ionic
strength.
Keratinase was very stable in the presence of different
additives (Table 2). Reducing agents,
such as
-mercaptoethanol and DTT, had no effect on proteinase
activity. The nonionic detergent Triton X-100 and the anionic
detergent SDS increased keratinase activity slightly; this was mainly
the result of increased substrate accessibility to the enzyme. Of the
chemical reagents tested, only a very high acetonitrile concentration
(50%, vol/vol) and 0.5 to 1 M NaCl significantly decreased protease
activity.
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TABLE 2.
Effects of solvents, detergents, reducing agents,
and ionic strength on the activity of purified S. albidoflavus serine proteinase
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Hydrolysis of various proteins with SAKase and other
proteases.
Table 3 shows the
hydrolyzing activities of SAKase, SGPB, Tritirachium album
proteinase K, and
-chymotrypsin with fibrous insoluble and soluble
proteins.
Compared with SGPB and proteinase K, SAKase had a greater ability
to degrade keratin and also exhibited higher relative activities (specific activity with keratin versus specific activity with collagen
and specific activity with solubilized keratin versus specific activity
with gelatin). This was also true for
-chymotrypsin. The elastolytic
activity of SAKase was very low compared to proteinase K activity.
Substrate specificity of purified keratinase.
P1
specificity (nomenclature of Schechter and Berger
[32]) was determined with different synthetic amino
acid derivatives with amino protection (Table
4). The new proteinase exhibited broad
specificity with selectivity for aliphatic, hydrophobic amino acids or
ionized residues, such as Arg. The nature of the amino acid at the
P2 or P3 site also markedly influenced the
specificity for the P1 site. For instance, proline at the
P2 site had an effect on the P1 specificity
[for Suc-(Ala)2-Pro-Phe-pNA and
Bz-Pro-Phe-Arg-pNA]). No hydrolysis was detected with
Suc-Ala-pNA, Suc-(Ala)2-pNA, Suc-Phe-pNA, and Bz-Arg-pNA.
The amidase activity of the protease was markedly influenced by
elongation of the peptide chain Suc-(Ala)n-pNA when n increased from two to three.
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TABLE 4.
Enzyme kinetic parameters for hydrolysis of different
synthetic substrates by the purified serine proteinase from
S. albidoflavus
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The proteinase exhibited esterase activity with Bz-Tyr-ethylester and
had a very high proteolytic coefficient
(kcat/Km) for Suc-(Ala)2-Pro-Phe-pNA, a well-known substrate for
-chymotrypsin and chymotrypsinlike proteinases. This was mainly the
result of the high kcat value.
Dissolution of feather meal by the keratinase.
The keratinase
was examined to determine its ability to solubilize feather meal.
Figure 4 shows the data obtained. The
S. albidoflavus protease degraded up to 67% of this fibrous
substrate. In comparison, SGPB degraded only 50% of the substrate, and
the rate was significantly lower. When native keratin (hair, horn) was
used, only about 10% of the substrate was solubilized by our enzyme.

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FIG. 4.
Feather meal hydrolysis with SAKase and SGPB. The
experimental conditions were as follows: 50°C; 20 mM Tris HCl (pH
8.5); 5% (wt/vol) feather meal; constant agitation at 900 rpm; 50 keratinolytic activity units/ml was added each 4 h until the
residual dry weight (measured after three washes) was constant.
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DISCUSSION |
The 16S rDNA of strain K1-02 differed from the
previously described 16S rDNA of S. albidoflavus and
S. sampsonii by only two nucleotides. It should be noted
that S. sampsonii is considered a subjective synonym of
S. albidoflavus (38); this synonymy has been
confirmed by 16S rDNA comparisons and by studies of the 16S-23S
rDNA intergenic spacer (15). Thus, strain
K1-02 is most closely related to S. albidoflavus. When strain K1-02 is grown on a simple
medium containing keratin-based materials, it excretes a large number
of both metalloproteinases and serine proteinases, as do other
Streptomyces species, such as S. fradiae and
S. griseus (3, 21, 27). These late-occurring
extracellular proteases, which appear after exponential growth is
complete, may participate in in situ degradation of mycelium proteins
during morphological differentiation (13, 22). A high yield
of a pure major keratinolytic serine proteinase that exhibited 37% of
the total supernatant keratinolytic activity was obtained when a simple
purification scheme was used. Under the nonoptimized culture
conditions, 2.6 mg of pure keratinase per liter was obtained.
Our N-terminal sequence analysis revealed a very high level of homology
with the sequence of SGPB, a major component of the pronase produced by
S. griseus (17), a closely related species (38); this enzyme has also been designated elastaselike
enzyme III (12). The weakly alkaline, thermostable, purified
enzyme had an apparent subunit molecular mass (18 kDa) that was very similar to that of SGPB (18.6 kDa) (17) or SFase-2 (19 kDa) (18), a keratinolytic enzyme of S. fradiae ATCC
14544. Protease inhibitor effects, substrate specificities, and the
results of some chemical studies showed that the new keratinase may be
classified as a serine proteinase belonging to the chymotrypsinlike
superfamily, even if it was not inhibited by TPCK (18). The
remarkable level of N-terminal sequence identity of SAKase and SGPB,
together with the very similar molecular weights and differential
susceptibilities to proteases inhibitors, strongly suggests that the
new protease is indeed the S. albidoflavus homologue of
SGPB. It is therefore likely that a small number of structurally and
enzymatically closely related proteases are expressed by at least these
two Streptomyces species and maybe by other species
belonging to the same cluster (35).
The substrate specificities of SAKase were studied by using synthetic
peptides. The purified proteinase exhibited specificity with aromatic
and hydrophobic amino acid residues, such as Tyr, Phe, Ala, and Val, at
the carboxyl side of the splitting point in the P1
position. SAKase is active against arginine peptide bonds, as
demonstrated previously for SGPB (27). When
Suc-(Ala)n-pNA is used as the substrate, a
minimum length of three residues is necessary to observe peptide
hydrolysis, indicating that SAKase probably has an extended active
site. SAKase specificity depends mainly on secondary
enzyme-substrate contacts with amino acid residues
(P2, P3, etc.) more distant from the scissible
bond, as illustrated by the difference between kinetic parameters
observed with Suc-(Ala)2-Val-pNA and
Suc-Tyr-Leu-Val-pNA. A similar observation has been made
previously with other chymotrypsin-like proteinases (25). The proteolytic coefficient
(kcat/Km) of SAKase
with Suc-(Ala)2-Pro-Phe-pNA (821 mM
1
· s
1) is considerably higher than the proteolytic
coefficients of Streptomyces pactum and S. fradiae (66 and 130 mM
1 · s
1,
respectively) (2, 18) and is comparable to the
proteolytic coefficient of SGPB (1,500 mM
1 · s
1) (7), for which Phe is one of the optimal
P1 substrates (34).
SAKase was also tested by using fibrous substrates (keratin, collagen,
and elastin) in order to compare its efficiency with the efficiencies
of SGPB, proteinase K, and
-chymotrypsin. The keratinase exhibited a
marked preference for keratin-based substrates. The relative activity
(specific activity with keratin versus specific activity with collagen)
of this enzyme was two and three times higher than the relative
activities of SGPB and proteinase K (Table 3), respectively; the latter
enzymes hydrolyze a broad range of insoluble proteins. The difference
was even greater if elastin was used as the substrate; SAKase was 36 times less efficient than proteinase K. As fibrous substrate hydrolysis
proceeds by heterogeneous phase catalysis, enzyme targeting requires
the following two steps: (i) adsorption of the enzyme to the
macromolecule surface by electrostatic and/or hydrophobic interactions,
followed by (ii) enzyme diffusion on the surface of the substrate up to
the splitting point (36). The weak ability of SAKase to
hydrolyze type I collagen compared to its ability to hydrolyze fibrous
keratin does not depend on a kinetic limitation linked to the initial step, enzyme adsorption to the surface of the substrate, since the
enzyme behaves the same with the solubilized forms of substrates (gelatin and solubilized keratin). Thus, the observed differences between the specific activities of SAKase for fibrillar proteins such
as keratin and collagen are mainly linked to differences in the
primary structures of the substrates and/or in the accessibility of the
enzyme to the splitting points. The hydrolytic activity of SAKase is
affected when the ionic strength increases. This phenomenon is
not a result of enzyme inactivation since it is not observed during
hydrolysis of the soluble substrate Suc-(Ala)3-pNA and
chemically solubilized feather keratin (Table 2). Therefore, the first
step, protease adsorption to fibrous keratin, implies that the
interaction is mainly electrostatic.
As evidence, the new enzyme is homologous to SGPB, which is excreted by
S. griseus. Thus, the new keratinase, which belongs to
a highly conserved protease family (33), acquired some
discrete mutations that confer its ability to act during
heterogeneous phase catalysis, particularly with keratin. Sidhu and
Borgford (34) recently showed in a study of a broad
selection of SGPB mutants that few mutations, either at the promature
junction or at several sites conferring primary specificity of the
mature SGPB, could lead to recombinant SGPB with modified efficiencies (kcat/Km),
thermostabilities, or primary specificities. Therefore, a molecular
approach to the gene coding for the SAKase should be useful for
elucidating the mechanisms involved in keratinolysis in comparison with SGPB.
Even though more than 65% hydrolysis was observed with feather meal,
only 10% dissolution was observed with native keratin, such as keratin
azure, native feathers, or hair keratin, as described previously
by other authors (2). This indicated that additional activity or treatment is needed to completely solubilize this compact
fibrous protein. This point is crucial in the development of
keratin-based substrate hydrolysis reactions.
 |
ACKNOWLEDGMENTS |
This work was supported by research grants from Agence de
l'Environnement et de la Maîtrise de l'Energie (ADEME)
and Conseil Régional du Limousin.
We are grateful to R. Faure, C. Pradoux, and C. Belzanne for technical assistance.
 |
FOOTNOTES |
*
Corresponding author. Mailing address:
Département de Génie Biologique, I.U.T., allée
André Maurois, 87065 Limoges Cedex, France. Phone: 33 05 55 43 43 90. Fax: 33 05 55 43 43 93. E-mail: labioiut{at}.unilim.fr.
 |
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