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Applied and Environmental Microbiology, June 1999, p. 2730-2737, Vol. 65, No. 6
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Modulation of Lipid Metabolism and Spiramycin
Biosynthesis in Streptomyces ambofaciens Unstable
Mutants
Catherine
Schauner,1
Annie
Dary,2,*
Ahmed
Lebrihi,1,
Pierre
Leblond,2
Bernard
Decaris,2 and
Pierre
Germain1
Laboratoire de Fermentations et de
Bioconversions Industrielles, ENSAIA, Institut National Polytechnique
de Lorraine,1 and Laboratoire de
Génétique et de Microbiologie, Associé à
l'Institut National de la Recherche Agronomique, Faculté des
Sciences de l'Université Henri Poincaré, Nancy
1,2 Vandoeuvre-lès-Nancy, France
Received 19 October 1998/Accepted 3 March 1999
 |
ABSTRACT |
Streptomyces ambofaciens is prone to genetic
instability involving genomic rearrangements at the extremities of the
chromosomal DNA. An amplified DNA sequence (ADS205), including an open
reading frame (orfPS), is responsible for the reversible
loss of spiramycin production in the mutant strain NSA205
(ADS205+ Spi
). The product of
orfPS is homologous to polyketide synthase systems (PKSs)
involved in the biosynthesis of erythromycin and rapamycin and is
overexpressed in strain NSA205 compared with the parental strain
RP181110. As PKSs and fatty acid synthase systems have the same
precursors, we tested the possibility that overexpression of
orfPS also affects lipid metabolism in strain NSA205. This report focuses on comparative analysis of lipids in strain RP181110, the mutant strain NSA205, and a derivative, NSA228
(ADS205
Spi+). NSA205 showed a dramatically
depressed lipid content consisting predominantly of phospholipids and
triacylglycerols. This lipid content was globally restored in strain
NSA228, which had lost ADS205. Furthermore, strains RP181110 and NSA205
presented similar phospholipid and triacylglycerol compositions. No
abnormal fatty acids were detected in NSA205.
 |
INTRODUCTION |
Streptomycetes are filamentous
bacteria which exhibit a complex cycle of morphological differentiation
and produce a wide range of secondary metabolites with clinical,
veterinary, and agricultural uses. In the streptomycetes, many
characteristics associated with biochemical differentiation are
genetically unstable. In Streptomyces ambofaciens, a
spiramycin producer (24), numerous dispensable
characteristics of secondary metabolism, such as pigmentation, aerial
mycelium formation, and antibiotic production, are genetically unstable
(14, 31). Most described instabilities consist of chromosomal deletions, often associated with large-scale DNA
amplifications (2, 16, 17). These rearrangements are found
at the extremities of the chromosome. In a previous work,
non-spiramycin-producing derivatives of strain RP181110 carrying
amplified DNA sequences (ADS) of various sizes were isolated. All of
these ADS were shown to be located within a unique region (named AUD205
[for amplifiable unit of DNA]) of the wild-type chromosome. Studies
of the progeny of one of these strains, NSA205, which harbors the
largest ADS (ADS205 [89 kb]) and is defective in spiramycin
production (Spi
), revealed that this amplification was
correlated with the Spi
phenotype, and both were
unstable. Indeed, in all cases studied, the loss of ADS205 was
accompanied by restored spiramycin production (4). ADS205
corresponded to the amplification of a particular sequence (AUD205),
which does not contain the cluster of spiramycin biosynthetic genes
(5, 15, 27). Sequencing of part of AUD205 permitted
identification of an open reading frame whose expression was higher in
NSA205 than in the parental strain RP181110. The predicted product of
orfPS presents homologies with polyketide synthases (PKS)
responsible for erythromycin and rapamycin biosynthesis (1, 7,
29). In their initial stages, all polyketides are synthesized by
a mechanism that is very similar to that of fatty acid biosynthesis
(11, 22). Simple acyl precursor units such as acetyl
coenzyme A (CoA), propionyl-CoA, and butyryl-CoA are activated in
malonyl-CoA, methylmalonyl-CoA, or ethylmalonyl-CoA by two kinds of key
enzymes (acylkinases coupled with phosphotransferases and carboxylases)
in Streptomyces. Polyketide synthase catalyzes successive
condensation of activated precursors to a long carbon chain. As fatty
acid and polyketide biosyntheses are mechanistically related and often
use the same precursor molecules, we tested the hypothesis that
amplification of AUD205, which was shown to greatly reduce spiramycin
production, also interacts with lipid metabolism of strain NSA205.
Herein we report a comparative analysis of the lipid compositions of
strains RP181110, NSA205, and NSA228, a derivative of strain NSA205
which has lost the amplification of ADS205 and has restored spiramycin
production (4). The global lipid content of S. ambofaciens NSA205 was strongly depressed: the phospholipid content was dramatically depleted and there was no observed
accumulation of neutral lipids, such as triacylglycerols,
compared with the parental strain RP181110. Lipid content was
globally restored in strain NSA228, and it presented a sixfold-higher
level of spiramycin production.
 |
MATERIALS AND METHODS |
Bacterial strains, media, and culture conditions.
S.
ambofaciens RP181110 was obtained from Rhône-Poulenc and
derived from strain ATCC 15154 (5). S. ambofaciens NSA205, a non-spiramycin-producing mutant derived from
RP181110, has a deletion associated with an amplification of 89 kb (ADS205) (see Fig. 1). Strain NSA205 is genetically unstable and can
undergo additional deletion events leading (in seven independent cases) to restoration of spiramycin production, loss of ADS205, and partial deletion of AUD205. NSA228 is one of seven derivatives (4). It has restored spiramycin production, has lost the amplification of
ADS205, and contains a partial AUD205 deletion (see Fig. 1) (4,
5). Bacillus subtilis ATCC 6633 was used as an
indicator strain for determination of antibiotic production. Spores of
S. ambofaciens were maintained in 20% glycerol at
20°C,
and 100 ml of preculture medium (the same as fermentation medium) was inoculated with 0.1 ml of S. ambofaciens (about
108 spores/ml) and incubated in 500-ml Erlenmeyer flasks on
a rotary shaker (250 rpm) at 28°C for 48 h. About 0.1 g of
biomass per liter from the resulting preculture was used to inoculate
the fermentation medium. The fermentation medium (18)
contained dextrins (30 g/liter), KH2PO4 (14 mM), CoCl2 · 6H2O (0.3 mg/liter), NaCl
(20 g/liter), NH4Cl (37 mM), MgSO4 · 7H2O (1 g/liter), and ZnSO4 · 7H2O (15 mg/liter). The pH in the flasks was maintained by
CaCO3 (5 g/liter), which was replaced by
CaCl2 · 2H2O (1 g/liter) in the 3-1 jar
fermentor (CMF 100;
-Alpha-Laval Chemap AG, Volketswil, Switzerland). During the 6-day fermentation, the temperature was controlled at 28°C and the pH was held at 7.0 ± 0.1 by KOH (2 M) and HCl (2 M). The fermentor's agitation rate was maintained at 300 rpm, and dissolved oxygen saturation was 30% ± 5%. The antibiotic
detection medium contained glucose (8 g/liter), yeast extract (3 g/liter), meat extract (3 g/liter), KH2PO4 (100 mM), peptone trypsic (10 g/liter), and Bacto Agar (8 g/liter) and was adjusted to pH 7.3. Extractions of genomic DNA were performed with
mycelia grown in fermentors for 12 h at 30°C and resuspended in
Hickey-Tresner liquid medium (25).
Determinations of dextrin and ammonium concentrations.
Dextrin concentration was determined according to the method described
by Hanson and Phillips (10). Culture medium ammonium concentration was determined with an ammonia electrode (Orion Research,
Boston, Mass.), with ammonium chloride as the standard.
DNA extraction, endonuclease restriction, and Southern
analyses.
Total DNA was extracted as previously described by
Leblond et al. (15). Restriction enzymes were purchased from
Boehringer (Mannheim, Germany) and used as recommended by the supplier.
DNA fragments were separated on agarose gels according to the method of
Sambrook et al. (28). Southern blotting, prehybridization, and hybridization were carried out as previously described
(6). The cosmids used as probes correspond to recombinant
cosmids resulting from a genomic library of S. ambofaciens
DSM40697 (15) (see Fig. 1). Cosmids 20A12, 21B10, 24D1,
21E10, and 23E11 permitted detection of almost the entire AUD205
region. Cosmids A85, E7C, and G36 are AseI-linking cosmids
(15). Labeling of probes and detection of specific hybrids
were performed with the DIG DNA labeling and detection kit under
conditions recommended by the supplier (Boehringer).
Measurement of growth.
The cell dry weight (CDW) was
measured by monitoring the absorbance at 660 nm
(A660) with a spectrophotometer (DU 7500;
Beckman), according to the method described by Lebrihi et al.
(19). For each strain under these conditions, 1 g CDW
per liter corresponded to an A660 of 3 in the
culture medium.
Antibiotic production.
Spiramycin titers of culture broths
were estimated by the agar plate diffusion assay, with B. subtilis as the indicator. The three antibiotic forms of
spiramycin (I, II, and III) were identified by high-pressure liquid
chromatography (HPLC) (model 590; Millipore Waters) with a µ-Bondapak
C18 reversed-phase column (3.9 by 300 mm, 5-µm particle
diameter) (Millipore Waters). Spiramycin was supplied by
Rhône-Poulenc-Rorer (Vitry-sur-Seine, France). Analysis was
conducted under isocratic conditions with acetonitrile-sulfuric acid
(1%) (76:24 [vol/vol]) as the mobile phase. The sample (20 µl) was
subjected to a 0.8-ml min
1 flow rate. Spiramycin forms
were detected at 238 nm with an LC Spectrophotometer (model 481;
Millipore Waters) and were quantified with an integrator (model 745;
Millipore Waters).
Extraction of lipids.
Total lipid extracts were obtained
from powdered, freeze-dried cells by extraction with
chloroform-methanol (2:1 [vol/vol]) as described by Folch et al.
(8). All lipid samples were dried, weighed, and stored at
70°C under nitrogen gas prior to analysis.
Separation of lipids.
Total lipid extracts dissolved in
chloroform were fractionated by column chromatography (Silica Gel 60;
Merck, Darmstadt, Germany). Neutral lipids were eluted with chloroform,
glycolipids were eluted with acetone-chloroform at 95:5 (vol/vol), and
phospholipids were eluted with methanol-chloroform at 90:10 (vol/vol).
Neutral lipids or total lipid extracts were separated and identified
(Rf values compared with those of reference
substances) by thin-layer chromatography (TLC) on precoated Silica Gel
60 TLC plates (Merck) with hexane-diethyl ether-acetic acid (90:10:1
[vol/vol/vol]) as the solvent. Spots were homogeneously sprayed with
40% (vol/vol) perchloric acid in water and carbonized at 180°C.
After development, the plates were scanned with a Shimadzu-9000
densitometer (600 nm) in order to quantify neutral lipids against
standards (Sigma-Aldrich Chemie, Steinheim, Germany).
Phospholipids were separated by two-dimensional TLC. The solvent for
the first dimension was chloroform-methanol-ammonia (65:25:5 [vol/vol/vol]). The solvent for the second dimension was
chloroform-methanol-acetic acid-water (80:12:15:4 [vol/vol/vol/vol]).
Phospholipids were identified by the following staining procedures:
phosphorus-containing lipids with ammonium molybdate stain
(Sigma-Aldrich Chemie), amino-nitrogen-containing lipids with ninhydrin
stain, mannose-containing lipids with anisaldhehyde detection, and
acidic phospholipids with rhodamine 6G stain. Quantitative determinations of phospholipid families were carried out by scanning plates (545 nm) sprayed with the ammonium molybdate stain, using standards (Fluka Biochemika).
Fatty acid analysis.
Aliquots of phospholipids and
triacylglycerols with a standard were converted into fatty acid methyl
esters (FAMEs) by transmethylation (20). Lipids in
chloroform were dried under nitrogen gas, and 1 ml of
BF3/methanol reagent (14%) (Sigma) was added. The
resulting mixture was heated at 90°C for 45 min. After cooling, 1 ml
of water was added and FAMEs were extracted into hexane (three
extractions of 2 ml each). FAMEs were concentrated in hexane and
separated by gas chromatography (GC) with a Chrompack model CP-9001 GC
equipped with a Carbowax 20M (Ohio Valley) OV-1 capillary column (30 m by 0.25 mm by 0.5 µm) and a flame ionization detector. The sample injector was operated in the split mode at a ratio of 1 to 20. Carrier
flow of nitrogen was maintained at 100 kPa of pressure. Injector and
detector temperatures were set at 250 and 260°C, respectively. The
oven temperature during a chromatographic run (40 min) was ramped from
165 to 200°C at 1°C/min, and the oven was subsequently cooled. A
1-µl sample was injected. Chromatograms were integrated with the
Chromatography Data System (Maestro; Chrompack). FAME composition was
determined by measuring peak areas after identification with standards
and by comparing relative retention times.
Short-chain fatty acid measurements.
Short-chain fatty acids
in the medium were quantified by GC (model EL; Intersmat IGC 121) with
a Propak Q80 column, 100 mesh (2 mm by 2 m), and a flame
ionization detector. The column temperature was held constant at
180°C. Known amounts of standard short-chain fatty acids were used as
an external standard for calibration procedures. The external standard
(8 µl) or sample supernatant was mixed with 2 µl of internal
standard (methanol-HCl (6 M)-distilled water (4:6.2:89.8
[vol/vol/vol]). A 2-µl subsample of the resulting mixture was
injected for analysis.
Ethyl acetate extracts of culture supernatants.
Cultures of
S. ambofaciens RP181110, NSA205, and NSA228, grown in
chemically defined medium for 5 days at 28°C, were centrifuged for 15 min at 6,000 rpm. The supernatants (200 ml) were adjusted to pH 9.0 with concentrated NH4OH and were extracted twice with 1 volume of ethyl acetate. The organic phases were combined and concentrated by rotary evaporation. Extracts were analyzed on silica
gel TLC plates (Merck) which were developed with
chloroform-ethanol-ammonium acetate (15%) (85:15:1 [vol/vol/vol]),
pH 7.0. Anisaldehyde-sulfuric acid-ethanol (1:1:9 [vol/vol/vol] spray
heated for 1 min at 110°C was used to vizualize the compounds. The
indicator strain, B. subtilis, was seeded into antibiotic
medium and run on unstained TLC plates to test inhibition of compounds.
Inhibition zones were developed by overnight incubation of the plates
at 37°C. Spiramycin was used as the standard to identify spiramycin
forms produced by the three S. ambofaciens strains.
 |
RESULTS |
Molecular characterization of strains NSA205 and NSA228.
As
mentioned above, strain NSA205 carries an ADS which was spontaneously
lost to generate NSA228. Physical mapping studies revealed that strains
NSA205 and NSA228 share an extensive deletion (>400 kb) with different
right endpoints, since AUD205 is partially deleted in strain NSA228.
Finally, Southern experiments using the spiramycin resistance genes and
some of the spiramycin biosynthetic genes as probes revealed that
neither mutant is deleted for these genes, which are located outside of
the unstable region (4, 5, 15).
BamHI restriction patterns of strains RP181110, NSA205, and
NSA228 were hybridized with different probes derived from the unstable
region to test whether some additional deletion event occurred
during the conservation of strains NSA205 and NSA228. Both mutant
strains were found to be deleted for the regions revealed by probes A85
and E7C (Fig. 1). On the other hand, the
region revealed by probe G36 was present in both mutants, as confirmed by the presence of a hybridization pattern identical to that of strain
RP181110. Finally, hybridization patterns obtained by the probes
belonging to AUD205 confirmed the amplification of this region in
strain NSA205 and its partial deletion in strain NSA228. Thus, no
additional deletion event was detected.

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FIG. 1.
AseI restriction map of the ends of the
S. ambofaciens RP181110 chromosomal DNA. AUD205 is unique in
strain RP181110 and is partially deleted in strain NSA228 ( p
AUD205). Tandem reiteration of AUD205 in strain NSA205 leads to ADS205.
The AseI-linking cosmids G36, E7C, and A85 are also
indicated. The left extremity of the deletion was not precisely
determined in the mutants.
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|
All of these results, combined with those already reported
(
5), allowed us to conclude that strains NSA205 and NSA228
are
probably deleted at both chromosomal extremities and that strain
NSA228 harbors a partial deletion of AUD205 (Fig.
1).
Growth of organisms.
Growth was based on submerged culture
conditions with a chemically defined medium which permits reproducible
growth and spiramycin production (18). Precultures in the
exponential phase of growth were used to inoculate fermentors. All
fermentations were carried out in triplicate for each strain. The
growth curves presented in Fig. 2 correspond to mean values deduced
from the three independent experiments. No initial lag phase was
observed in the fermentors. The three strains showed similar growth in
each experiment, although the maximum amount of biomass obtained in
each culture was higher for strains RP181110 and NSA228 (3.5 g/liter)
than for strain NSA205 (2.25 g/liter). Carbon and nitrogen sources
(dextrins and ammonium) were consumed at the same rate by each strain
during the exponential growth phase (qdextrins = 0.17 g h
1 g
1 CDW;
qNH4+ = 0.6 mmol
h
1 g
1 CDW). In each culture, the stationary
phase started when the nitrogen source, which was the limiting growth
factor, was totally depleted (data not shown). During the stationary
phase of growth, dextrins were slowly consumed (0.03 g h
1
g
1 CDW) by each strain. No significant difference in
carbon source utilization was observed between the parental strain and
NSA205. In contrast, ammonium was released sooner for strain NSA205 (72 h) than for the others (108 h). Specific yield of ammonium production was higher in NSA205 (4.5 mmol g
1 CDW) than in strains
RP181110 and NSA228 (1 mmol g
1 CDW). This indicated that
cellular lysis associated with proteolysis was higher in strain NSA205
than in strains RP181110 and NSA228.
Spiramycin production.
During fermentation, spiramycin
production was quantified by the disc diffusion method. HPLC analysis
of culture broth indicated that in all cases, the three forms of
spiramycin (I, II, and III) were detected in the same proportions (data
not shown). In strains RP181110 and NSA228, spiramycin production
occurred after 48 and 36 h of growth, respectively. This period
corresponded to the end of the transition phase of growth (Fig.
2). Specific spiramycin production rates
were 0.4 and 1.7 mg h
1 g
1 CDW, respectively
(Fig. 2). Strain NSA228 had a sixfold-higher specific production yield
(74 mg g
1 CDW) than strain RP181110 (13 mg
g
1 CDW). Strains RP181110 and NSA228 produced spiramycin
for 36 and 60 h, respectively. Dary et al. (4) did not
detect spiramycin production after 7 days of growth of NSA205 in a
complex medium. Under our conditions, late (72 h of growth) spiramycin
production occurred in NSA205 for a period of 12 h (Fig. 2).
However, specific production yield and specific production rate were
significantly lower in strain NSA205 (5 mg g
1 CDW and 0.3 mg h
1 g
1 CDW, respectively) than in strains
RP181110 and NSA228 (Fig. 2). This weak production could be due to the
medium used for fermentation or to the loss of amplification of ADS205,
which was shown to be unstable and lost at high frequency
(4). Hence, mycelium of NSA205 was harvested at different
times (between 24 and 144 h) and genomic DNA was extracted and
digested with BamHI to visualize the amplification, which
was detected at each time tested (data not shown). However, the
possibility of heterogeneity of genomes in NSA205 fermentation could
not formally be excluded.

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FIG. 2.
Growth ( ) and spiramycin production ( ) of S. ambofaciens RP181110, NSA205, and NSA228 on a chemically defined
medium in a 3-liter batch fermentor. Results are means of three
independent experiments with standard deviations of 20 to 30%.
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Analysis of short-chain fatty acid excretion in the medium.
To
test whether the non-spiramycin-producing phenotype of strain NSA205
resulted from high excretion of short fatty acid precursors, GC
analysis was conducted on culture medium. Excretion of acetate only was
detected (data not shown). For each strain, it reached a maximum level
of about 75 mg/liter after 144 h of growth. No significant level
of propionate, butyrate, or isobutyrate was detected. These results
suggest that inhibition of spiramycin production in strain NSA205 does
not result from higher excretion of short-chain fatty acids required
for antibiotic production.
Formation of intracellular lipids during growth.
Variations in
intracellular total lipid content were investigated during a
6-day fermentation of strains RP181110, NSA205, and NSA228.
The lipid content continually increased in strains RP181110 and
NSA228 (Fig. 3). However, in each
independent experiment, the maximum lipid content observed in strain
NSA228 (90 mg g
1 CDW) was significantly lower than in
strain RP181110 (150 mg g
1 CDW). The lipid content of
strain NSA205 was found to be highly depressed. Indeed, in each
experiment, lipid accumulation stopped after 60 h of incubation
(Fig. 3) and continually decreased until the end of fermentation. The
maximum level of lipids obtained in this strain was about 72 mg
g
1 CDW, after 60 h of incubation.

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FIG. 3.
Formation of total lipids during growth of S. ambofaciens RP181110 ( ), NSA205 ( ), and NSA228 ( )
cultivated in a synthetic medium. Results are means of three
independent experiments with standard deviations of 15 to 20%.
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Specific analysis of lipid families revealed three fractions which
constituted the majority of total lipids: phospholipids,
neutral
fractions, and glycolipids. The glycolipid fraction was
in the minority
in each strain (data not shown), and no more analysis
was conducted on
this family. Until 60 h of growth, accumulation
of phospholipids
was observed in each strain (Fig.
4A); it
was
about 42, 32, and 46 mg g
1 CDW in strains RP181110,
NSA228, and NSA205, respectively. While
the phospholipid content of
strains RP181110 and NSA228 continued
to increase between 60 and
80 h and remained steady throughout
the stationary phase, the
level of phospholipids decreased dramatically
(about 40%) in strain
NSA205, as was observed for total lipids
(Fig.
4A).

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FIG. 4.
Formation of major lipid families (phospholipids [A],
triacylglycerols [B], and other neutral lipids [C] during growth of
S. ambofaciens RP181110 ( ), NSA205 ( ), and NSA228
( ). Results are means of two independent experiments with standard
deviations of 10% for phospholipids, 20% for triacylglycerols, and
30% for other neutral lipids.
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Analysis of neutral fractions separated by TLC revealed two families.
The first corresponded to triacylglycerols, which were
detected and
identified with carbonization of standards. The second
was visible on
TLC without treatment. These lipids were yellow-orange
colored and
probably contained pigments. Triacylglycerols were
detected in small
amounts during the exponential and transitional
phases of growth (Fig.
4B). At 84 h, increasing lipid content
in RP181110 and NSA228
corresponded to the accumulation of neutral
lipids. In contrast, in
strain NSA205, triacylglycerols increased
to 15 mg g
1 CDW
until 60 h and thereafter showed a significant decrease.
The
fraction containing pigments was not quantified directly,
but a rough
estimation was performed by using the difference between
the neutral
fraction and the triacylglycerols, which were quantified
with
standards. The fraction containing pigments increased significantly
between 60 and 132 h for RP181110 and was significantly lower
and
stable throughout fermentation in strains NSA228 and NSA205
(Fig.
4C).
Small amounts of free fatty acids, monoacylglycerols,
and
diacylglycerols were detected at every stage of growth in
the neutral
fraction, as determined by
TLC.
In conclusion, NSA205 had a greatly depressed lipid content from
60 h of fermentation. Further, except for the fraction containing
pigments, lipid content was globally restored in strain
NSA228.
Evolution of the different phospholipid families during
growth.
The phospholipid fraction was analyzed by two-dimensional
TLC during fermentation of strains RP181110, NSA205, and NSA228. Four
major families were observed: cardiolipin (CL) (Fig.
5A), phosphatidylethanolamine (PE) (Fig.
5B), and phosphatidylinositol and lysophosphatidylethanolamine (PI-LPE)
(Fig. 5C). The last two were not separated on silica gel plates and
were quantified together. Two other minor families were detected:
phosphatidic acid and phosphatidylinositolmannoside. RP181110 and
NSA205 had the same relative CL proportion during fermentation (between
38 and 45%) (Fig. 5A), as well as similar PE (Fig. 5B) and PI-LPE (Fig. 5C) profiles. Thus, strain NSA205 seemed to be quantitatively affected in all phospholipid content. The most striking differences were observed with strain NSA228; these differences concerned the four
families of phospholipids. In each experiment, the relative proportions
of CL in strain NSA228 varied during fermentation (Fig. 5A). Indeed, at
24 h CL represented only 27% of the phospholipids. Its relative
proportion increased until 84 h, at which time it constituted 40%
of the phospholipids, as in strains RP181110 and NSA205. The PE
proportions were steady between 24 and 60 h, after which they
continually decreased to represent 25% of the phospholipids at the end
of fermentation (Fig. 5B). Differences were also observed for PI-LPE
proportions (Fig. 5C), which were higher in strain NSA228. Although the
phospholipid content was globally restored in strain NSA228, the
differences described above suggest that the additional deletion
affecting at least AUD205 may have resulted in modifications of
phospholipid composition.

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FIG. 5.
Relative proportions of the major phospholipid families
of S. ambofaciens RP181110 ( ), NSA205 ( ), and NSA228
( ). (A) CL. (B) PE. (C) PI-LPE. Results are means of two independent
experiments with standard deviations of 5 to 10%.
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Fatty acid composition.
The fatty acid composition of
triacylglycerols and phospholipids was investigated by GC, with
suitable standards, in fermentations of strains RP181110, NSA205, and
NSA228. The profiles in each family showed a relative representation of
fatty acids within the C12 to C20 range of
carbon chain length for each strain. The branched-chain fatty acids
corresponded to the iso (i) and anteiso (ai) series derivatives of
C15:0, C16:0, and C17:0 acids. The mean proportions of phospholipid fatty acid constituents observed at
three times during growth (48, 72, and 120 h) are shown in Table
1. Spiramycin production began in strains
RP181110 and NSA228 at 48 h. The 72-h point corresponded to the
phase of production, and spiramycin production was stopped at 120 h (Fig. 2).
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TABLE 1.
Fatty acid composition of phospholipids of S. ambofaciens NSA205, and NSA228 grown in fermentation medium
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The majority of fatty acids underwent variations during growth. Between
48 and 72 h, the variations observed in each strain
had similar
tendencies. Conversely, fatty acid proportions differed
between 72 and
120 h. For example, the i-C
16:0, ai-C
15:0,
and
ai-C
17:0 fatty acids increased in strain RP181110 while
their
relative proportions decreased in the mutant strain NSA228. The
fatty acid profiles of triacylglycerols revealed no significant
differences. Indeed, during fermentation, variations in fatty
acid
proportions for one strain and between strains were less
important and
concerned only a few fatty acids (data not shown).
The most striking
differences were observed for C
16:1 and
ai-C
17:0,
which were less concentrated in RP181110 than in
NSA228 and NSA205
at each
time.
Finally, no abnormal fatty acids were detected in strains NSA205 and
NSA228. Therefore, the depressed lipid content observed
in strain
NSA205 does not correlate with synthesis of an abnormal,
potentially
harmful, fatty
acid.
Ethyl acetate extracts of fermentation broths.
As no abnormal
fatty acid was detected in strain NSA205, the depressed lipid content
could have resulted from competition for precursors between
orfPS and fatty acid synthase. In order to detect the
putative orfPS product, ethyl acetate extracts of fermentation broths from each strain were analyzed by TLC (Fig. 6) and bioassayed with B. subtilis as the indicator. Before staining, a yellow-orange
compound with an Rf of 0.9 was detected in the supernatant of strain NSA205. This compound was not detected in the two
other strain supernatants. With anisaldehyde sulfuric spray, spiramycin
forms (Rf between 0.4 and 0.7) were detected as
violet-brown and were significantly higher in strain NSA228 (Fig. 6).
The yellow-orange compound produced by strain NSA205 showed a strong
yellow color with anisaldehyde sulfuric spray (Fig. 6). A small amount
of this compound was observed in strain RP181110 but not in strain
NSA228. Spiramycin forms and degradation products
(Rf [inferior], 0.4) were detected with
bioassays. The compound produced only by NSA205 was not active against
B. subtilis.

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FIG. 6.
TLC of ethyl acetate extracts from 200-ml culture
supernatants of S. ambofaciens strains. Lanes 1 to 4, spiramycin standards (Sigma) (1, 0.125 mg; 2, 0.25 mg; 3, 0.065 mg; 4, 0.5 mg); lanes 5 and 8, RP181110 extracts; lanes 6 and 9, NSA205
extracts; lanes 7, 10, and 11, NSA228 extracts.
|
|
 |
DISCUSSION |
The aim of this investigation was to determine whether the lipid
metabolism of strain NSA205 could be affected by amplification of
AUD205, which contains a PKS gene (orfPS). The lipid
content of three strains (RP181110, NSA205, and NSA228) was determined. RP181110 is the parental strain. NSA205 contains a deletion associated with a large amplification of 89 kb containing orfPS. Strain
NSA228 was isolated from the progeny of strain NSA205. This
strain was isolated for its capacity to produce spiramycin. All strains
selected from the progeny of strain NSA205 for the ability to produce
spiramycin had lost ADS205 and presented a partial deletion of AUD205
(4).
Spiramycin production of each strain was analyzed in a chemically
defined medium. The spiramycin production level of the parental strain
RP181110 was considered the reference. Although on a complex medium
NSA205 was found to be a non-spiramycin-producing strain (4), under culture conditions favorable for spiramycin
production, very low production was detected later, compared with that
of the other strains. Strain NSA228 produced spiramycin to a
sixfold-higher level than the reference strain. The high spiramycin
production of NSA228 may result from an additional deletion event
affecting at least AUD205. Dary et al. (4) showed that the
Spi
phenotype was unstable in strain NSA205 and was lost
at a high frequency in its lineage. A loss of ADS205 in only a few
genomes could explain the detection of spiramycin during the
cultivation of NSA205, since some of them (like the NSA228 genomes) are
responsible for production 15-fold higher than that of NSA205.
Lipids of streptomycetes are widely reported in the literature (3,
9, 12, 21, 23, 26). Lipid composition is strongly influenced by
environmental conditions and the physiological state of the bacteria
(30). Therefore, cultures in batch fermentors were
controlled for different parameters (pH, dissolved oxygen, temperature)
and allowed adequate growth for lipid analysis and comparison. These
studies showed that phospholipids and neutral lipids were in the
majority. The global lipid content of strains RP181110 and NSA228
increased with culture age. Conversely, lipids were synthesized for
only 60 h in strain NSA205 and then were greatly depleted.
Analysis of the major constituents of total lipid content indicated
that phospholipids and triacylglycerols, both dependent on long-chain
fatty acid biosynthesis, decreased and were responsible for the total
lipid depletion in strain NSA205. A qualitative interaction between the
synthases which could produce abnormal, potentially harmful, fatty
acids should be responsible for the depressed lipid content in NSA205.
Yu and Hopwood (32) described an early growth inhibition of
strains in which expression of sets of whiE PKS genes were
probably responsible for interference with fatty acid biosynthesis by
competition or by production of abnormal fatty acids. Hence, the
phospholipid families and their fatty acid composition, like
triacylglycerol composition, were investigated for each strain. No
abnormal fatty acids were detected, and the phospholipid composition
was similar to that of the parent.
Reduction of overall lipid content in strain NSA205 could be due to
amplification of orfPS. Indeed, strain NSA228 showed
restored lipid content except for the pigment fraction. As the
reduction of this fraction affected both mutants, it was probably
associated with the large deletion present in both strains (Fig. 1). As
Aigle et al. (1) observed, orfPS was
overtranscribed in NSA205 compared with RP181110 during both the
stationary and rapid phases of growth, and because no abnormal fatty
acid was detected, we postulated that orfPS overexpression
could result in a metabolic drain of the acyl precursors (acetyl-CoA
and malonyl-CoA) shared by the PKS and fatty acid synthase systems.
Therefore, supernatants of the three strains were analyzed. Ethyl
acetate extracts revealed the presence of a great amount of a pigmented
compound in the supernatant of strain NSA205. Only a small amount of
this pigmented compound was detected in strain RP181110, and it was not
detected in strain NSA228. Although its structure remains to be
elucidated, this compound could belong to the large class of
polyketides. These results support the hypothesis of a metabolic drain
of precursors from strain NSA205. As the new compound has not been
purified and quantified, it is difficult to speculate on whether it
accounts for the decrease in the amount of lipids. Acetyl-CoA
carboxylase is considered to be one of the key enzymes leading to the
formation of malonyl-CoA in S. ambofaciens, but other
pathways have been studied (13). Future experiments will
attempt to compare the specific activities of these enzymes in cellular
extracts of both strain RP181110 and strain NSA205. Moreover,
monitoring the incorporation of [14C]acetate into lipids
and compounds extracted with ethyl acetate from strain NSA205 could
confirm the drain of acyl precursors from lipids to a polyketide during
the stationary phase of growth.
 |
ACKNOWLEDGMENT |
This work was supported by a grant from the French Ministry of
Education and Research.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Laboratoire de
Génétique et de Microbiologie, Associé à
l'Institut National de la Recherche Agronomique, Faculté des
Sciences de l'Université Henri Poincaré, Nancy 1, BP 239, F-54506 Vandoeuvre-lès-Nancy, France. Phone: (33) 3 83 91 21 79. Fax: (33) 3 83 91 25 00. E-mail: dary{at}scbiol.u-nancy.fr.
Present address: Equipe Microbiologie et Hygiène Alimentaire,
ENSAT, Institut National Polytechnique de Toulouse, F-31326 Castanet
Tolosan, France.
 |
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Applied and Environmental Microbiology, June 1999, p. 2730-2737, Vol. 65, No. 6
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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