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Applied and Environmental Microbiology, June 1999, p. 2745-2747, Vol. 65, No. 6
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
High-Level Production of Heterologous Protein by
Engineered Yeasts Grown in Cottage Cheese Whey
Carlo
Maullu,1
Giorgio
Lampis,1,*
Alessandra
Desogus,1
Angela
Ingianni,1
Gian Maria
Rossolini,2 and
Raffaello
Pompei1
Dipartimento di Scienze Mediche, Cattedra di
Microbiologia Applicata, Università di Cagliari, 09124 Cagliari,1 and Dipartimento di Biologia
Molecolare, Sezione di Microbiologia, Università di Siena, 53100 Siena,2 Italy
Received 9 December 1998/Accepted 8 March 1999
 |
ABSTRACT |
Cottage cheese whey is a cheese industry by-product still rich in
proteins and lactose. Its recycling is seldom cost-effective. In this
work we show that the lactose-utilizing yeast Kluyveromyces lactis, engineered for production of recombinant human lysozyme, can be grown in cottage cheese whey, resulting in high-level production of the heterologous protein (125 µg/ml).
 |
TEXT |
The food industry produces a
considerable amount of by-products that are still rich in organic
substances. Although they are a potential source both for the
extraction of valuable compounds and for the production of edible
biomass, similar by-products are often discarded for economic reasons
(6). This is also the case for cheese whey (CW) and cottage
cheese whey (CCW), which are the major by-products of the cheese-making
industry. CW, which is still rich in proteins, lactose, vitamins, and
minerals (16), has been used in a variety of valorization
processes such as drying and constituent extraction (19) and
production of biomass (3, 14, 21), butanol (13),
ethanol (18), and glycerol (10). However, owing
to the high collection costs and the seasonal fluctuations in
production, it is often discarded in sewage or in the environment, causing water and soil pollution (5, 6). CCW, which is still rich in lactose and minerals but contains smaller amounts of proteins, remains largely unused apart from a few experimental applications (4, 8, 12).
In this work we have used CW and CCW as culture media for growing
Kluyveromyces lactis strains, engineered to produce
recombinant human lysozyme (h-Lys). Luxuriant growth was obtained in
both media, with the secretion of large amounts of the heterologous protein and the production of microbial biomass, suggesting that CW and
CCW could be profitably recycled for production of valuable heterologous proteins by engineered microorganisms. A simple protocol for purification of the recombinant h-Lys from the whey culture supernatant is also described.
The K. lactis strains used in this work, K6 and K7, have
been previously described (20). Briefly, they are K. lactis WM37 derivatives stably transformed with an
integrative expression vector that directs production of recombinant
h-Lys as a soluble protein secreted into the culture medium. In this
vector, expression of the heterologous cDNA is under the control of the
galactose-inducible K. lactis GAL7 promoter. The two strains
differ in the copy number and integration pattern of the expression
cassettes and produce different amounts of h-Lys in defined culture
media (20).
Yeast strains were grown in synthetic defined (SD) medium, CW, or CCW.
SD medium was made of Yeast Nitrogen Base (Difco Laboratories, Detroit,
Mich.), 6.7 g/liter, supplemented with glucose (0.2 g/liter) (SD-GLU),
galactose (45 g/liter) (SD-GAL), or lactose (45 g/liter) (SD-LAC) as
the carbon source. CW and CCW were from ewe's milk. They were
collected at the time of production, stored at 4°C, and used within 2 days. Under these conditions no significant decrease in the lactose
concentration caused by the contaminant microbial flora was observed.
The reducing sugar concentration was determined by the method of Miller
(15), with lactose as a standard. The total protein
concentration was determined by the method of Bradford (2),
with bovine serum albumin as a standard. The total microbial count
present in CW and CCW was determined by an agar-inclusion assay using
plate count agar medium. Compared with CW, CCW contained smaller
amounts of proteins and lipids and also had a lower microbial count
owing to the temperature and pH conditions used for preparation of the
cottage cheese (heating up to 90°C for 10 min at pH 4.5).
Sterilized CW and CCW were prepared by autoclaving at 121°C for
15 min, followed by removal of any insoluble material by centrifugation
at 10,000 × g for 15 min at room temperature.
Biomass and recombinant protein production by K. lactis
K6 and K7 grown in CW and CCW.
Starter yeast cultures of each
strain were prepared by growing cells in SD-GLU overnight at 28°C in
an orbital shaker (New Brunswick Scientific, Edison, N.J.) at 150 rpm.
Each starter culture was used to inoculate CW, CCW, SD-GAL, and SD-LAC.
The inoculation was carried out at a ratio of 1:8 (100 ml of starter
culture in 700 ml of fresh medium), which was suitable for preventing
the outgrowth of the contaminating bacteria present in unsterilized whey. The cultures were grown at 28°C for 42 h at 150 rpm, and several parameters, including biomass yield and the concentrations of
lysozyme, reducing sugars, and total protein in the culture supernatant, were monitored at various time intervals. The biomass yield was determined as wet weight after centrifugation at
10,000 × g. Lysozyme activity was assayed by the
lysoplate method using Micrococcus luteus AH-47 as the
substrate (17). Briefly, M. luteus cells were
suspended in saline, autoclaved at 121°C for 15 min, washed twice in
the same manner, and added to tryptose phosphate agar medium to obtain
a final optical density (A590) of 1. The molten
medium was poured into petri dishes to obtain a layer of 6 mm. Samples
were inoculated into 4-mm-diameter wells cut into the solidified
medium. The amount of enzyme was indicated by the diameter of the halo
of micrococcal lysis formed around the wells after incubation for
24 h at 37°C. Purified human lysozyme (Sigma Chemical Co.,
St. Louis, Mo.) was used to prepare a calibration curve in the
concentration range 0.1 to 100 µg/ml. The yeast cell count at the end
of each experiment was determined on Sabouraud dextrose agar (Difco),
and the degree of contamination by other microorganisms was estimated
from the difference between total microbial counts and yeast cell counts.
The amounts of h-Lys obtained by growing K. lactis K6
in unsterilized CW or CCW were lower (by about 75%) than
those obtained with K7, and for this reason the former strain was not
investigated further (data not shown).
The results obtained by growing K. lactis K7 on unsterilized
CCW are shown in Table 1. The maximum
biomass amount (
24 g/liter) was obtained after 36 h and
remained constant thereafter. Sugar was rapidly utilized, becoming
undetectable at 30 h, while the total protein concentration was
reduced to approximately 50% of the initial value by the same time. No
basal bacteriolytic activity was detectable in the medium. h-Lys was
detectable in the culture supernatant after 14 to 18 h, and its
concentration reached a peak of up to about 130 µg/ml after 30 h. Subsequently, the h-Lys concentration in the supernatant of
unsterilized CCW showed a decrease, being reduced to less than 70% of
the peak value after 36 h. This phenomenon could be due to some
proteolytic degradation occurring in the late stages of the culture; it
did not occur in sterilized CCW or in other sterilized media. At the
end of fermentation, the total microbial count-to-yeast count ratio was always <1.5. No significant differences were observed when CW was used
instead of CCW (Table 2). Only
unsterilized CCW showed a ratio higher than 1. When K. lactis K7 was grown on either SD-GAL or SD-LAC, the maximum amount
of h-Lys produced was lower than that obtained in whey.
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TABLE 1.
Biomass yield and h-Lys, reducing sugar, and protein
concentration in unsterilized CCW used to grow
engineered K. lactis
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Purification and characterization of h-Lys from whey cultures.
The h-Lys produced by K. lactis K7 grown in CCW was purified
as follows. The culture supernatant was centrifuged at 6,000 × g for 15 min at 4°C. The supernatant was adjusted to 40%
ammonium sulfate saturation, and the precipitate was removed by
centrifugation at 10,000 × g for 20 min at 4°C. The
ammonium sulfate saturation in the supernatant was then adjusted to
80%, and the precipitate was collected as described above. The pellet
of the second precipitation, which contained the bacteriolytic
activity, was resolubilized in 20 mM phosphate buffer (PB), pH 7.0 (1/20 of the original volume), dialyzed against 50 volumes of the same
buffer for 14 h at 4°C, and loaded onto a
carboxymethyl-Sephadex G-50 (Pharmacia Biotech, Uppsala, Sweden)
column (90 by 3 cm) equilibrated with 50 mM PB, pH 7.0. The column was
washed with 50 mM PB, pH 8.0, and eluted with a 0.1 to 1 M NaCl
gradient in the same buffer. Most of the contaminating proteins
cofractionated with h-Lys following the ammonium sulfate precipitation,
did not bind to the carboxymethyl-Sephadex matrix, or were eluted at
low NaCl concentrations. Fractions containing the bacteriolytic
activity were eluted in a single peak at 0.5 M NaCl (data not shown).
These fractions were pooled, dialyzed against 20 mM PB, pH 7.0, and
concentrated by ultrafiltration with an Amicon concentrator (model
8400; Amicon Inc., Beverly, Mass.) equipped with a 3,000-Da-cutoff
membrane. The yield of the purification process, evaluated by
comparison of the bacteriolytic activity in the CCW supernatant with
that of the purified preparation, was reproducibly around 15%.
In sodium dodecyl sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE), the purified h-Lys preparation appeared as a single
band with an
Mr of

14,000 and was estimated
to be >95% pure (Fig.
1A).
Immunoblot analysis of the purified h-Lys preparation confirmed
its
reactivity with the anti-h-Lys antiserum (Fig.
1B). Zymogram
analysis
of the purified h-Lys preparation after renaturing SDS-PAGE
confirmed
the bacteriolytic activity of the 14-kDa band (Fig.
1C). SDS-PAGE was
performed according to the method of Laemmli
(
11) with an
acrylamide concentration of 5% (wt/vol) in the
stacking gel and of
15% in the separating gel. Immunoblotting
was performed according to
the method of Towbin et al. (
22)
and Tsang et al.
(
23) with a semi-dry transfer apparatus (Bio-Rad
Laboratories, Richmond, Calif.), nylon membranes, and a goat anti-h-Lys
antiserum (Calbiochem, San Diego, Calif.). The antibody was revealed
by
use of an alkaline phosphatase-protein G conjugate (Calbiochem)
and
5-bromo-4-chloro-3-indolyl phosphate-nitroblue tetrazolium
as a
substrate (Boehringer, Mannheim, Germany). Zymography after
renaturing
SDS-PAGE was performed as previously described (
1).

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FIG. 1.
Detection of purified h-Lys produced by engineered
K. lactis. (A) Coomassie blue-stained PAGE. Lane 2, h-Lys
highly purified by the column chromatography protocol employed; lane 1, commercial human lysozyme; lane 3, unpurified lysozyme. (B) Western
blot of purified h-Lys. Lane 1, h-Lys from K. lactis; lane
2, commercial human lysozyme. (C) Zymogram of purified h-Lys. In this
picture the enzyme appears as a halo of bacteriolytic activity on the
M. luteus-containing regenerating polyacrylamide gel. Lane
1, K. lactis purified h-Lys; lane 2: commercial lysozyme.
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Concluding remarks.
Recycling of whey for biomass production
with lactose-utilizing microorganisms is a well-established process
(3-5, 7, 8, 10, 14, 18). However, little information is
available concerning the use of CW and CCW for growth of engineered
microorganisms to produce valuable heterologous proteins, which could
greatly improve the cost-effectiveness of whey recycling. Results of
this work indicated that both CW and CCW can be used successfully for a
similar application in combination with a K. lactis strain
genetically engineered for heterologous gene expression. In fact, under
the small-scale laboratory conditions evaluated in this work the
process yielded considerable amounts of the heterologous protein,
which were significantly higher than those obtained by growing the same strain in defined laboratory media (reference 20 and
present results). Since large-scale fermentation technology for
K. lactis in whey is well established (5, 9), it
is possible that, under optimized fermentation conditions, even higher
protein yields could be obtained. In our experiments, even unsterilized
CCW was found to be suitable as a fermentation medium provided
that it was kept refrigerated and used reasonably soon after
collection. However, it should be considered that, in this case, the
heterologous protein was an enzyme with antibacterial activity, while
production of recombinant products lacking antibiotic activity could
require a whey sterilization step or the use of more inoculum, with an eventual impact on the economy of the process.
With a similar expression system, in which the recombinant product is
secreted into the medium during yeast growth, the generated
biomass
does not need to be processed for protein extraction and
can be used as
an animal food ingredient (
9), resulting in
an optimal
productivity of the recycling
process.
 |
ACKNOWLEDGMENTS |
We are grateful to the Podda Company (Cagliari) for kindly
supplying the CW and CCW used to perform this study. Thanks are due to
Cesira Galeotti (Chiron-Biocine, Siena, Italy) for critical discussions
and advice. The technical assistance of R. Murru is also acknowledged.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Cattedra di
Microbiologia Applicata, Università di Cagliari, via Porcell 4, 09124 Cagliari, Italy. Phone: 39-070-6758481. Fax: 39-070-6758482. E-mail: glampis{at}unica.it.
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Applied and Environmental Microbiology, June 1999, p. 2745-2747, Vol. 65, No. 6
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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