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Applied and Environmental Microbiology, October 2000, p. 4481-4485, Vol. 66, No. 10
University of California Joint Bioengineering
Graduate Program, Berkeley and San Francisco,1
and Department of Chemical Engineering, University of
California, Berkeley,2 California 94720
Received 27 March 2000/Accepted 19 June 2000
There is limited knowledge of interspecies interactions in biofilm
communities. In this study, Pseudomonas sp. strain GJ1, a
2-chloroethanol (2-CE)-degrading organism, and Pseudomonas
putida DMP1, a p-cresol-degrading organism, produced
distinct biofilms in response to model mixed waste streams composed of
2-CE and various p-cresol concentrations. The two organisms
maintained a commensal relationship, with DMP1 mitigating the
inhibitory effects of p-cresol on GJ1. A triple-labeling
technique compatible with confocal microscopy was used to investigate
the influence of toxicant concentrations on biofilm morphology, species
distribution, and exopolysaccharide production. Single-species biofilms
of GJ1 shifted from loosely associated cell clusters connected by
exopolysaccharide to densely packed structures as the
p-cresol concentrations increased, and biofilm formation
was severely inhibited at high p-cresol concentrations. In
contrast, GJ1 was abundant when associated with DMP1 in a dual-species
biofilm at all p-cresol concentrations, although at high
p-cresol concentrations it was present only in regions of
the biofilm where it was surrounded by DMP1. Evidence in support of a
commensal relationship between DMP1 and GJ1 was obtained by comparing
GJ1-DMP1 biofilms with dual-species biofilms containing GJ1 and
Escherichia coli ATCC 33456, an adhesive strain that does
not mineralize p-cresol. Additionally, the data indicated that only tower-like cell structures in the GJ1-DMP1 biofilm produced exopolysaccharide, in contrast to the uniform distribution of EPS in
the single-species GJ1 biofilm.
Biofilms of environmental and
medical significance frequently consist of diverse populations of
microorganisms (4, 12). A range of metabolic interactions
have been observed among microorganisms in biofilms, including
mutualistic and commensal relationships (16, 26). Moreover,
metabolic interactions within biofilms may be facilitated by the
spatial arrangement of interacting cells (11, 19, 20, 27).
In biofilms that detoxify mixed organic wastes, the metabolic
interactions among bacteria could potentially influence biofilm
structure and development, since the metabolism of complex organic
pollutants often involves multispecies bacterial consortia (10,
23). For example, fluctuating toxicant concentrations could
provide selective pressure that alters the species distribution in a
biofilm, ultimately influencing biofilm activity.
Another feature of biofilms that may respond to changing toxicant
concentrations is the exopolysaccharide (EPS) matrix. EPS is an
integral structural and functional component of biofilm systems
(6, 24), can account for up to 90% of the organic matter in
a biofilm (25), and helps protect organisms in the biofilm
community from environmental stresses (1; T. R. Neu, G. Packroff, and J. R. Lawrence, Abstr. 97th Gen. Meet. Am.
Soc. Microbiol. 1997, p. 396, 1997). Recent research has characterized the composition and quantity of EPS produced (17, 18), as well as its presence in natural biofilms (8). Few studies
have investigated the relationship among EPS, biofilm architecture, and
toxicant concentrations.
Recently, scanning confocal laser microscopy has been developed into a
powerful tool for elucidating the three-dimensional architecture and
species distribution of biofilm systems (5, 22) and may be
useful for correlating biofilm structure with interspecies
relationships. In this study, a triple-labeling technique that was
compatible with confocal microscopy was developed to characterize the
response of a dual-species biofilm to two compounds that are commonly
found in mixed organic chemical waste. The biofilm consisted of
Pseudomonas putida DMP1, a p-cresol-degrading
organism, and Pseudomonas sp. strain GJ1, a 2-chloroethanol
(2-CE)-degrading organism. The morphology, species distribution, and
EPS production of biofilms grown under increasingly inhibitory toxicant
concentrations were examined using scanning confocal laser microscopy.
The resulting images elucidated the effect of the interspecies
metabolic interactions on the organization of the biofilm.
Strains, plasmids, and media.
Pseudomonas sp. strain
GJ1, a 2-CE degrader, and Pseudomonas putida DMP-1, a
p-cresol degrader, were described previously (13; Y. T. Wang and M. Qu, Abstr. 65th Annu.
Conf. Expos. Water Environ. Fed., p. 63, 1992). Escherichia
coli ATCC 33456, a wild-type Escherichia coli strain,
was obtained from the American Type Culture Collection (21).
Plasmid pSMC21 is pUCP-based cloning vector containing
gfpmut2 and the ampicillin, carbenecillin, and kanamycin resistance genes. Plasmid pVLT33 is an RSF-1010-based, broad-host-range plasmid harboring the kanamycin resistance gene. All strains were grown
in MMV (13), a minimal medium supplemented with 50 µg of
kanamycin ml Growth and toxicity studies.
Pseudomonas sp. strain
GJ1 harboring pSMC21 (3) was grown in MMV with the following
concentrations of 2-CE (Aldrich, Milwaukee, Wis.): 5, 10, 15, 20, 25, and 30 mM. The specific growth rates of Pseudomonas sp.
strain GJ1 harboring pSMC21 in suspended culture were determined. All
growth experiments were performed at least twice, and the mean values
are reported. P. putida DMP1 harboring pVLT33 (9)
was grown in MMV with the following concentrations of
p-cresol (Aldrich): 0, 0.2, 0.5, 0.7, 0.9, and 1.9 mM. The suspended culture growth rates of DMP1 were determined.
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Commensal Interactions in a Dual-Species Biofilm
Exposed to Mixed Organic Compounds
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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
1. During all biofilm colonization processes,
0.1% succinate, a substrate that is not inhibitory to either strain,
was provided as the sole carbon source for both GJ1 and DMP1. All
strains were cultured at ambient temperature (22 ± 1°C).
Bench-scale flow cell. Biofilms were prepared, as described previously, in bench-scale parallel-plate flow cells (reactor volume, of 0.35 ml) (5). A coverglass was glued to a plastic frame using General Electric silicone rubber adhesive sealant RTV 102 (GE Silicones, Waterford, N.Y.). Flow cells were operated in recirculating (start-up) or continuous modes at flow rates of 0.86 or 0.12 ml/min, respectively.
GJ1 and DMP1 dual-species biofilms. For colonization of the surface, medium containing equal concentrations of exponentially growing GJ1 (harboring pSMC21) and DMP1 (harboring pVLT33) was recirculated through a flow cell for 6 h. Subsequently, sterile medium containing 20 mM 2-CE and either 0.7 or 1.9 mM p-cresol was continuously pumped through the flow cell for 45 h. MMV (15 ml) was pumped through each flow cell to remove cells that were not attached to the coverglass. The biofilms in the flow cells were then stained and imaged as described below.
GJ1 and ATCC 33456 dual-species biofilms. Exponentially growing E. coli ATCC 33456 harboring pVLT33 was recirculated through a flow cell for 6 h to promote colonization. Exponentially growing Pseudomonas sp. strain GJ1 harboring pSMC21 was then recirculated through the same flow cell for 3 h. After both colonization steps, sterile medium containing 20 mM 2-CE and either 0.7 or 1.9 mM p-cresol was continuously pumped through the flow cell for 45 h. To maintain ATCC 33456, which cannot grow on either 2-CE or p-cresol, 0.002% glucose was added to the medium. The addition of glucose did not influence strain GJ1, which is unable to grow on glucose. The resulting biofilms were rinsed, stained, and imaged.
Single-species biofilms. Flow cells were colonized as described above with medium containing either GJ1 harboring pSMC21, ATCC 33456 harboring pVLT33, or DMP1 harboring pVLT33. The colonized flow cells were then switched to the continuous-flow conditions described above. Again, ATCC 33456 biofilms were switched to medium containing 0.002% glucose. The GJ1 biofilms were rinsed and stained with calcofluor white, an EPS stain, but not with SYTO 59, prior to imaging. The ATCC 33456 and DMP1 biofilms were rinsed and stained with both SYTO 59 and calcofluor white before imaging.
Staining biofilms with SYTO 59. After being rinsed, flow cells containing either E. coli ATCC 33456 or P. putida DMP1 were stained with 20 µM SYTO 59 (Molecular Probes, Inc., Eugene, Oreg.), a soluble nucleic acid dye that emits in the red region, for 10 min.
Staining biofilms with calcofluor white.
After staining of
the biofilms with SYTO 59, all flow cells were stained in the dark with
0.025% calcofluor white M2R (Sigma Chemical Co., St. Louis, Mo.) for 1 min. This dye binds to
-linked polysaccharides, such as cellulose
and chitin (14). Calcofluor white cannot penetrate intact
cell membranes and does not stain viable cells (15). The
biofilms were then rinsed with 2 ml of MMV to decrease the background
fluorescence. The stained flow cells were imaged using confocal microscopy.
Confocal microscopy. Confocal microscopy was performed using an MRC-1024 laser-scanning confocal imaging system (Bio-Rad Microsciences, Cambridge, Mass.) equipped with a Diaphot 200 inverted microscope (Nikon, Inc., Tokyo, Japan). All images were obtained with a 20× lens. The 488-nm line from a Kr/Ar laser was used to simultaneously excite both green fluorescent protein (GFP) and SYTO 59. GFP was detected using a standard fluorescein filter set (522/35 band-pass filter), and SYTO 59 emissions were detected using a 605/32 band-pass filter. The 363-nm line from an argon ion UV laser (model ENT 622; Innova Technology/Coherent Enterprises, Santa Clara, Calif.) was used to excite the calcofluor white, which was then detected using a 455/30 band-pass filter. The GFP emissions were directed to the green channel, the SYTO 59 emissions were directed to the red channel, and the calcofluor white emissions were directed to the blue channel. The resulting images were resized and printed using Adobe Photoshop 5.0 (Adobe Systems, Inc., San Jose, Calif.) software.
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RESULTS |
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Growth and toxicity studies.
P. putida DMP1 grew
optimally at 0.7 mM (75 ppm) p-cresol and experienced
substrate inhibition at p-cresol concentrations greater than
0.7 mM (Fig. 1A). In contrast, the growth
of Pseudomonas sp. strain GJ1 was unaffected by 2-CE at all
concentrations tested and was an order of magnitude slower than that of
DMP1 (Fig. 1B). DMP1 was unable to grow on 2-CE (Fig. 1C), and GJ1 was
unable to grow on p-cresol (Fig. 1D). Thus, each member of
the biofilm had an independent carbon source. For purposes of
investigating interactions between GJ1 and DMP1 in a biofilm, 0.7 or
1.9 mM (200 ppm) p-cresol concentrations were selected; 0.7 mM was the optimal concentration for DMP1 growth, while DMP1 substrate
inhibition occurred at 1.9 mM p-cresol. A 2-CE concentration
of 20 mM (1,600 ppm) was used.
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Biofilm morphology, species distribution, and EPS production.
Vertical sections of GJ1 single-species biofilms (Fig. 2A to
C), GJ1-DMP1 dual-species biofilms (Fig.
2D to F), and GJ1-ATCC 33456 dual-species biofilms (Fig. 2G to I) were
obtained using confocal microscopy. These biofilms were cultured in
medium containing succinate (Fig. 2A, D, and G), 20 mM 2-CE and 0.7 mM
p-cresol (Fig. 2B, E, and H), or 20 mM 2-CE and 1.9 mM
p-cresol (Fig. 2C, F, and I). In all images, green or yellow
cells correspond to GJ1 and red cells correspond to either DMP1 (Fig.
2D to F) or ATCC 33456 (Fig. 2G to I). Multiple images were collected
for each set of experimental conditions; a representative image is presented in all cases.
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DISCUSSION |
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The complementary metabolic activities of Pseudomonas sp. strain GJ1 and P. putida DMP1 were combined in a biofilm to produce a single functional system in which both strains were maintained. The planktonic growth and toxicity data (Fig. 1) obtained for the two pseudomonads suggests that GJ1 had a limited chance of survival in the presence of p-cresol. It was also evident that a single strain could not effectively remediate a mixed waste stream containing 2-CE and p-cresol.
Figures 2 and 3 demonstrate that GJ1 benefited from the close interactions with DMP1 in a dual-species biofilm. In the presence of p-cresol, GJ1 was present in the greatest proportion when it was paired with DMP1 in a biofilm. The fact that GJ1 was almost eliminated from single-species (Fig. 2C) or GJ1-ATCC 33456 dual-species (Fig. 2I) biofilms at a p-cresol concentration of 1.9 mM implies that it benefited from being coupled with DMP1, in addition to the nonspecific resistance to toxicants that is associated with biofilms (1). GJ1 depended on DMP1 to mineralize p-cresol and thus detoxify the medium in its vicinity.
The morphological changes in the GJ1-DMP1 biofilms which resulted from exposure to p-cresol caused GJ1 and DMP1 to become increasingly intermingled. A p-cresol concentration of 0.7 mM resulted in GJ1 being surrounded by DMP1 in the z direction (Fig. 2E and 3D to F). At 1.9 mM p-cresol, organizational changes were seen in the x-, y-, and z-directions (Fig. 2F and 3G to I). The contact between strains GJ1 and DMP1 was increased, with GJ1 becoming dispersed throughout the biofilm in the xy plane (Fig. 3G). This arrangement appears to have enhanced the survival of GJ1, possibly because the local concentration of p-cresol in its vicinity was reduced. Similarly, Nielsen et al. recently found that a biofilm of Burkholderia sp. strain LB400 and Pseudomonas sp. strain B13 (FR1) capable of mineralizing 3-chlorobiphenyl altered its morphology in response to changing growth substrates (19).
EPS production by the GJ1-DMP1 coculture biofilms was unaffected by the toxicant concentration. Rather, it appeared to be influenced by biofilm morphology. EPS was found only in tall vertical structures in the biofilm, such as tower- or mushroom-shaped clusters (Fig. 3C, F, and I), suggesting that there were different physiological interactions among the bacteria in the structures, in contrast to other regions of the biofilm. Since EPS was found only in the densely populated vertical clusters, it is possible that its production was controlled by quorum-sensing signals. Davies et al. have shown that quorum sensing plays an important role in P. aeruginosa biofilm structure and development (7); additionally, interspecies cell signaling has been demonstrated for a variety of microorganisms (2).
In summary, the organization and morphology of a dual-species biofilm changed in response to the selective pressure of increasing toxicant concentration. The arrangement of cells in the GJ1-DMP1 biofilm facilitated the survival of strain GJ1, which otherwise would have been eliminated from the biofilm. The commensal relationship between the two strains illustrates how metabolic cooperativity may be essential for maintaining multispecies microbial consortia for biological treatment of mixed organic compounds. Furthermore, an understanding of the mutual or commensal relationships in mixed-culture biofilms could aid in the design of multispecies biofilms for the biosynthesis of specialty chemicals or the biodegradation of xenobiotics that cannot be metabolized by a single organism.
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ACKNOWLEDGMENTS |
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We thank Carolyn Larabell at Lawrence Berkeley National Laboratory for use of the confocal microscope, George O'Toole for his contribution of pSMC21, and Thomas Neu for his advice on EPS staining. We also thank Frank Liao, UC Berkeley, for his assistance with experiments and Eric Granlund, UC Berkeley College of Chemistry machine shop, for his help in designing and constructing the flow cells.
This work was supported by the National Science Foundation (BES-9814088) and the Office of Naval Research (N00014-99-1-0182).
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Chemical Engineering, 201 Gilman Hall, University of California Berkeley, Berkeley, CA 94720-1462. Phone: (510) 642-4862. Fax: (510) 643-1228. E-mail: keasling{at}socrates.berkeley.edu.
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