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Applied and Environmental Microbiology, November 2000, p. 4988-4991, Vol. 66, No. 11
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Ectomycorrhizal Specificity Patterns in a Mixed
Pinus contorta and Picea engelmannii Forest in
Yellowstone National Park
Kenneth W.
Cullings,1,*
Detlev R.
Vogler,2
Virgil T.
Parker,3 and
Sara
Katherine
Finley1
National Aeronautics and Space
Administration-Ames Research Center, Moffett Field, California
94035-1000,1 Institute of Forest
Genetics, Davis, California 95616-6138,2 and
Department of Biology, San Francisco State University, San
Francisco, California 941323
Received 27 March 2000/Accepted 31 August 2000
 |
ABSTRACT |
We used molecular genetic methods to test two hypotheses, (i) that
host plant specificity among ectomycorrhizal fungi would be common in a
closed-canopy, mixed Pinus contorta-Picea engelmannii forest in Yellowstone National Park and (ii) that specificity would be
more common in the early successional tree species, P. contorta, than in the invader, P. engelmannii. We
identified 28 ectomycorrhizal fungal species collected from 27 soil
cores. The proportion of P. engelmannii to P. contorta ectomycorrhizae was nearly equal (52 and 48%,
respectively). Of the 28 fungal species, 18 composed greater than 95%
of the fungal community. No species was associated exclusively with
P. contorta, but four species, each found in only one core,
and one species found in two cores were associated exclusively with
P. engelmannii. These fungi composed less than 5% of the
total ectomycorrhizae. Thus, neither hypothesis was supported, and
hypothesized benefits of ectomycorrhizal specificity to both trees and
fungi probably do not exist in this system.
 |
INTRODUCTION |
Ectomycorrhizal (EM) mutualisms
(interactions between fungi and plant roots) provide plants with
increased access to resources, such as water, nitrogen, and phosphorus
(1, 18, 21, 31). They also protect plants from disease
(3, 17), from chemical extremes, such as high pH, and from
heavy-metal contamination (10, 11) and can facilitate
establishment of pioneer plants in harsh environments, such as mine
tailings (13, 38). While EM fungi are functionally similar
in their roles as mycorrhizae (4), individual species may
differ in physiological functions, e.g., the ability to degrade litter
(16, 26); in responses to environmental conditions, such as
soil temperature and moisture (4, 12); and in the
specificity of interactions with host plants (28).
EM specificity is thought to influence ecosystem function and to
benefit both plant and fungal partners (reviewed by Molina et al.
[28]). For example, specificity could enhance carbon transfer to the fungal partner (15) and could benefit an
early-successional plant by protecting portions of its root system from
mycorrhizal parasitism by invading tree species. Specificity could also
partition soil resources and provide "exclusive avenues" for
nutrient transfer from the soil to the plant host, and because EM
associations are required by many plants for survival, specificity may
limit the ability of some plants to migrate and establish and thus
influence the rates and directions of ecosystem change. Therefore,
assessment of EM specificity patterns is critical to our understanding
of ecosystem function, though it is yet unclear whether this phenomenon is common in nature.
Early specificity experiments indicated that most EM fungi could
establish symbioses with most EM plants (27). Closer
examination of specificity patterns reveals that the interaction
phenomenon is complex and that combinations of specificity and
nonspecificity occur simultaneously to influence ecosystem function and
successional processes (28). Fruiting body assessments and
long-term fungal community collections suggest a range of specificity
patterns from generalist to specialist for both fungal species and
vascular plant hosts (reviewed in reference 28).
Bills et al. (7) reported that in mixed spruce and hardwood
forest communities in the northeastern United States, only 8 of 54 fungal species were shared by hardwoods and spruce while 19 were
associated only with spruce. In greenhouse experiments, Molina et al.
(29, 30) found that a given fungus associated with only one
of the two tree species tested, and soil bioassays and seedling
outplantings of Pseudotsuga menziesii associated primarily
with one genus of fungi (5, 9, 33).
These data show that EM specificity occurs in culture and may occur in
nature. However, correlating laboratory studies with field analyses can
be problematic, as field conditions can alter specificity patterns
indicated by culture experiments. Termed "ecological specificity"
by Harley and Smith (21), this phenomenon was a major
justification for assessing specificity in the field. Furthermore,
because it is often difficult to determine which plant species a given
fungus associates with, few studies have addressed the issue of
specificity by direct assessment of below-ground diversity in a natural
setting. These studies usually require the tracking of single hyphae
through the soil (e.g., reference 37), though
studies of this type are difficult due to the fragile nature of
individual hyphae. The use of molecular methods has alleviated this
problem and made possible accurate in situ identifications of both
fungi (19) and plants (14) that form EM in the
field, enabling us to assess specificity patterns in mixed-tree-species forests.
Only a few studies have used molecular methods to assess EM specificity
patterns in the field. The first indicated that a single plant species
can associate exclusively with a single fungus, often across a broad
geographic range (15), and the second involved mycotrophic
orchids (36). Both plants were special cases involving achlorophyllous, epiparasitic plants that rely upon common mycorrhizal connections with neighboring trees for fixed carbon (8, 39). Another study, of two conifer species (22), concluded that
multiple-host fungi dominated on mycorrhizal roots and colonized the
roots of competing plant hosts. A third study (23) assessed
patterns of EM sharing between an angiosperm and a conifer and
concluded that sharing of EM fungi by Arctostaphylos sp. and
P. menziesii facilitated the establishment of the conifer in
sites dominated by the angiosperm. Because of the potential importance
of EM specificity to ecosystem function, and the conflicting results of
laboratory and field experiments, our objective was to use molecular
methods to test for specificity in the field.
In this study, we tested the hypotheses that a closed-canopy forest
would exhibit a high degree of EM specificity and that the
early-successional tree species in a mixed stand would exhibit greater
specificity than the invading tree species (25, 26, 28). We
performed this test in a successional system in which Pinus
contorta Douglas ex Louden (lodgepole pine) establishes after
stand-replacing fire and is invaded and eventually replaced by
Picea engelmannii Parry ex Engelmann (Engelmann spruce) and at a stage of forest development in which both tree species are codominant.
 |
MATERIALS AND METHODS |
EM were collected from three replicate mixed P. contorta-P. engelmannii 10-m by 10-m blocks located along the
western shore of Yellowstone Lake, approximately 100 m north of
the Pumice Point turnout. The soils were obsidian sand with a 2- to
5-cm-thick litter layer and sparse-to-thick Vaccinium
scoparium Cov (grouse whortleberry) undergrowth. This system
experiences natural fire disturbance triggering a successional series
approximately every 300 years, and stand-replacing fires occur
regularly at various spatial scales throughout the park
(32). The series begins with P. contorta
establishing first after a fire, and canopy closure with pure P. contorta occurs after 50 to 100 years. Later successional trees,
in this case P. engelmannii, begin to establish after
approximately 150 years and dominate after approximately 300 years.
We sampled in sites in which P. contorta stems were larger
(28-cm mean diameter at breast height) than those of P. engelmannii (17-cm mean diameter at breast height) (P < 0.0001) and P. contorta trees/trees outnumbered
P. engelmannii by approximately three to one (P < 0.0001). As a consequence, soil-coring sites were selected so
that cores were taken from plots containing approximately equal numbers
of both tree species, and coring plots were situated equidistant
between individuals of the two species.
We sampled in late June, after bud break, approximately one-third of
the way through the Yellowstone growing season. Because spatial
variation in the EM fungal community could account for more variation
than specificity patterns (24), we performed a preliminary
study to determine the spatial scale at which we should sample. We took
12 cores, each 8 cm in diameter and 25 cm in depth (two plots of three
cores each from two stands separated by 7 km), and observed that, at
this scale, overlap among the blocks was too low for statistical
analysis (data not shown). In the present study, we sampled for
specificity on a smaller spatial scale using cores collected from three
blocks separated by 20 to 100 m. Each block comprised three 5- by
5-m plots, with three cores taken from each plot (total number of
cores, 27).
The cores were kept on ice until they were processed, soaked overnight
in sterile water, and sieved to separate the EM tips from soil and
rocks. The tips were sorted by morphotype for color and shape
(2). Root tips were confirmed as mycorrhizal microscopically (22), and then individual morphotypes were subsampled from
each core for PCR analysis using the following protocol: 1 to 3 individual mycorrhizae/core were sampled if the tip total within a core
for that morphotype was less than 5, 3 to 5 were sampled if there were
5 to 10 tips of a particular morphotype, and 5 to 10 were sampled if
there were more than 10 individuals of a given morphotype. To ensure
that we found all of the diversity present in the EM community, we
divided the morphotypes into subgroups for restriction fragment length
polymorphism (RFLP) analysis. For example, an amber type would be
separated into morphotypes with either single or multiple bifurcations.
Split morphotypes of the same genetic type were later recombined for
quantification of total EM of each species in the system
(22).
DNA was extracted from individual EM by a cetyltrimethylammonium
bromide extraction method described by Cullings (14) and amplified by PCR. To identify fungi forming EM, fungal DNA was amplified from individual EM with fungus-specific primers (ITS1f and
ITS4b) for the nuclear ribosomal internal transcribed spacer (19). Thermocycling was conducted as follows: initial
denaturation at 95°C for 95 s followed by nine cycles of
denaturation at 94°C, primer annealing for 55 s at 55°C, and
extension for 45 s at 72°C; nine additional cycles with 2 min at
72°C extension; nine cycles with 3 min at 72°C extension; and a
final 10-min extension step at 72°C. Identifications of fungi forming
individual EM were made by RFLP comparisons of restriction digests of
amplified fungal EM DNAs to those of DNA amplified from reference
fungal fruiting bodies (19) using two restriction enzymes,
AluI and HinfI. Restriction fragment sizes were
determined by graphing the distance traveled on the gel and comparing
it to a fragment size marker (DNA Marker VIII; Boehringer Mannheim
Corp., Indianapolis, Ind.). Patterns that were nearly identical were
run on the same gel to confirm their differences. Trees forming
individual EM were identified to the genus level. Plant DNA was
amplified using the plant-specific primer combination 28KJ-28C and
using the PCR amplification program described above (14).
The amplified plant DNA was digested with HinfI and
RsaI, and the restriction patterns of EM were compared to
those of DNA amplified from reference needles collected at the site.
Fruiting bodies (mushrooms) for fungal species identification were
collected over 2 years (1995 and 1996) both inside and outside the core
sampling plots.
A contingency table and chi-square test (26 degrees of freedom) were
used to test the hypothesis that the subset of fungi present was
dependent upon the tree species. The contingency table is designed for
just such a test (35). In our initial surveys, we discovered
that cores taken within a few centimeters of each other could fail to
detect the same fungal species. Thus, one core could sample the middle
of a dense patch of EM of a given fungal species while an adjacent core
might strike only the edge of the same patch, resulting in a much lower
EM quantification. Therefore, we evaluated only the presence or absence
of a fungal species on each tree species in a core rather than the
abundance or biomass of individual EM root tips. The sizes and the mean difference in the number of individuals of each tree species (P. contorta and P. engelmannii) were analyzed by
Student's t test.
 |
RESULTS |
We analyzed approximately 726 individual EM. These samples were
distributed nearly equally between P. engelmannii and
P. contorta (52 and 48%, respectively). The distribution of
EM was patchy, so the numbers of species/core and of individual EM/core
were variable (mean number of EM species/core, 2.8 [standard error, 1.5]; mean number of individual EM/core, 290 [standard error, 230]).
We detected 18 RFLP patterns (Table 1),
which accounted for greater than 95% of the total EM in the system.
Ten additional RFLP types were detected in numbers too small to assess
specificity and were therefore omitted from the analysis. (The numbers
which follow the genus names are RFLP genetic type codes that link EM genetic types to fruiting body species.) Only five genera were detected
in 5 or more cores of 27 sampled: Russula strain 38, Inocybe strain 11, Cortinarius strain 10, Cortinarius strain 11, Hygrophorus strain 50, and
Suillus tomentosus. These fungal species composed 15, 12, 10, 10, 9, and 6% of the total EM root tips, respectively (Table 1).
There was no significant difference between groups of fungi detected on
P. contorta and P. engelmannii, and all fungal
species detected in two or more cores were found on both P. contorta and P. engelmannii, as were several of those
found in only a single core. We observed this pattern in all cores in
which each non-host-specific fungal species was detected. Some species
that were found in only one core (e.g., Cortinarius strain
23, Inocybe strain 65, and Hygrophorus strain 49)
were observed only on roots of P. engelmannii, but these
data alone are insufficient to confirm that these fungi specifically
colonize this host.
 |
DISCUSSION |
Our results provide little support for the hypothesis that
specificity exists in a late-successional forest stand and none for the
hypothesis that specificity would be more common in an early-successional tree species. In fact, Cortinarius strain
13 was the only fungal species detected in two cores that exhibited specificity, and this species was detected only on P. engelmannii. Fruiting body surveys suggest that
Cortinarius spp. associate with a wide range of host species
and that some species fruit only in association with Picea
(27). Specificity is hypothesized to increase the
competitive abilities of plant species by providing access to an
exclusive pool of nutrients (28). However, this fungal
species was relatively rare, composing less than 3% of the total
number of individual EM sampled. Nevertheless, Cortinarius strain 13 also may benefit from the exclusive association; it has been
hypothesized that specialization could provide more efficient transfer
of carbon from the plant to the fungal associate (15, 20).
Experiments utilizing 14C-labeled substrate are needed to
test this hypothesis.
Overall, our results indicate that specificity is rare in this system.
Dominance by broad-host-range fungi was reported in a P. menziesii-Pinus muricata forest in Marin County, Calif.
(22). Like P. contorta forests of Yellowstone,
this system is subject to frequent fires (32). In both
cases, one tree species in each system (P. muricata in Marin
County and P. contorta in Yellowstone) reestablishes after
fire via release of seed from serotinous cones. Thus, these EM fungi
may benefit from the ability to associate with both tree species in
each system (22). A somewhat contrasting result was found in
a successional system involving the invasion of a conifer, P. menziesii, into sites dominated by an angiosperm, Arctostaphylos (manzanita). Although the two species shared
EM, some level of specificity was found on the part of the
early-successional Arctostaphylos (23). We think
that future studies should be designed to account for the full range of
life history strategies and phylogenetic diversity of plant species in
natural ecosystems.
Low specificity can affect ecosystem function in several ways. Hyphal
connections shared among host plants may promote exchange of nutrients
and photosynthate between plants of the same or different species, and
therefore between overstory and understory plant populations
(28). For example, there is a net flow of fixed carbon to
shaded Pseudotsuga from unshaded Betula in
seedlings planted in the field, via common EM connections
(34). The ability of a plant to form EM with many fungal
species may also increase the plant's ability to obtain fungal
associates and hence nutrients and photosynthate, thereby enhancing its
fitness (21). Low specificity, however, could be a
disadvantage to existing plant species if newly establishing plants
could utilize the existing mycota and effectively parasitize existing
mycorrhizal associations (28). P. engelmannii
individuals, being smaller and establishing in the shade of P. contorta, could benefit from the interaction in this way. However,
although we detected little or no specificity on the species level,
different fungal genes may associate specifically with a particular
plant or plant species (22), restricting the avenues of
carbon transfer. Development of individual genet-level DNA markers to
determine whether hyphal connections exist between tree species,
coupled with experiments utilizing 14C-labeled substrate to
track the net transfer of fixed carbon through the system, will be
required to test this hypothesis.
 |
ACKNOWLEDGMENTS |
We thank the Center for Resources at Yellowstone National Park
for assistance with logistics, Ann Rodman and Bob Lindstrom of the
Yellowstone Soil Survey for access to soil nitrogen data and for
guidance in site selection, and J. R. Blair and Dennis Desjardin
of the Biology Department of San Francisco State University for
mushroom identifications.
This work was supported by an NSF grant to Ken Cullings and Virgil T. Parker (DEB/RUI 9420141) and a NASA-Director's Discretionary Fund
grant to Ken Cullings.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: NASA-Ames
Research Center MS 239-4, Moffett Field, CA 94035-1000. Phone: (650)
604-2773. Fax: (650) 604-1088. E-mail:
Kcullings{at}mail.arc.nasa.gov.
 |
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Applied and Environmental Microbiology, November 2000, p. 4988-4991, Vol. 66, No. 11
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
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