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Applied and Environmental Microbiology, December 2000, p. 5236-5240, Vol. 66, No. 12
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Relationship between Nitrite Reduction and Active
Phosphate Uptake in the Phosphate-Accumulating Denitrifier
Pseudomonas sp. Strain JR 12
Yoram
Barak and
Jaap
van Rijn*
Department of Animal Science, Faculty of
Agricultural, Food, and Environmental Quality Sciences, The Hebrew
University of Jerusalem, Rehovot 76100, Israel
Received 26 June 2000/Accepted 11 September 2000
 |
ABSTRACT |
Phosphate uptake by the phosphate-accumulating denitrifier
Pseudomonas sp. JR12 was examined with different
combinations of electron and carbon donors and electron acceptors.
Phosphate uptake in acetate-supplemented cells took place with
either oxygen or nitrate but did not take place when nitrite served as
the final electron acceptor. Furthermore, nitrite reduction rates by
this denitrifier were shown to be significantly reduced in the
presence of phosphate. Phosphate uptake assays in the presence of the
H+-ATPase inhibitor
N,N'-dicyclohexylcarbodiimide (DCCD), in the presence of
the uncoupler carbonyl cyanide 3-chlorophenylhydrazone (CCCP), or with
osmotic shock-treated cells indicated that phosphate transport over the
cytoplasmic membrane of this bacterium was mediated by primary and
secondary transport systems. By examining the redox transitions of
whole cells at 553 nm we found that phosphate addition caused a
significant oxidation of a c-type cytochrome. Based on
these findings, we propose that this c-type cytochrome serves as an intermediate in the electron transfer to both nitrite reductase and the site responsible for active phosphate transport. In
previous studies with this bacterium we found that the oxidation state
of this c-type cytochrome was significantly higher in
acetate-supplemented, nitrite-respiring cells (incapable of phosphate
uptake) than in phosphate-accumulating cells incubated with different
combinations of electron donors and acceptors. Based on the latter
finding and results obtained in the present study it is suggested that phosphate uptake in this bacterium is subjected to a redox control of
the active phosphate transport site. By means of this mechanism an
explanation is provided for the observed absence of phosphate uptake in
the presence of nitrite and inhibition of nitrite reduction by
phosphate in this organism. The implications of these findings regarding denitrifying, phosphate removal wastewater plants is discussed.
 |
INTRODUCTION |
Biological phosphate removal from
wastewater is a generally accepted, less costly alternative to chemical
phosphate removal (27). Microorganisms involved in this
process are capable of phosphate uptake in excess of their metabolic
requirements and store phosphate internally as polyphosphate (polyP)
polymers. Microorganisms thought to underlie phosphate removal in
wastewater plants are collectively known as phosphate accumulating
organisms (PAO). The general consensus concerning their metabolism is
that they require alternating aerobic and anaerobic (or anoxic)
conditions. Under such conditions phosphate is released in the
anaerobic zone and stored as polyP in the aerobic or anoxic zone.
Phosphorus is subsequently removed from the process stream by
harvesting a fraction of the phosphorus-rich bacterial biomass
(26). Isolation of bacterial isolates with all
characteristics attributed to PAO have failed so far, and information
on these organisms is based on studies with crude sludge samples or
enrichment cultures obtained from biological phosphate removing plants.
The lack of pure cultures hampers a basic understanding of this
process, and for this reason the effects of environmental factors on
phosphate removal by PAO, such as the presence of different electron
acceptors and the type of organic carbon source, are only partially understood.
In a recent study (4), we demonstrated that the
heterotrophic denitrifier Paracoccus denitrificans, as well
other denitrifying isolates, exhibits the capability of polyP synthesis
under either aerobic or anoxic conditions without the need for
alternating aerobic and anaerobic (or anoxic) switches.
Unlike PAO, these denitrifiers were unable to use
polyhydroxyalkanoates as an energy source for polyP synthesis and
derived energy from oxidation of external carbon sources. In
preliminary studies with one of these denitrifiers,
Pseudomonas sp. strain JR12, we found that phosphate uptake
changed with the type of electron acceptor used. Whereas nitrate-respiring cells were capable of phosphate uptake, cells incubated with nitrite as the sole electron acceptor were not. The
ability to respire on different electron acceptors provided a
possibility to examine the link between the respiratory electron transfer and the phosphate uptake mechanism in this organism. In the
present study, we report on a c-type cytochrome-mediated link between nitrite reduction and active phosphate transport in
Pseudomonas sp. strain JR12. It is shown how, as a result of the presence of phosphate, nitrite may accumulate in cultures of
Pseudomonas sp. strain JR 12. Nitrite is known to cause
severe problems in biological processes, including those in wastewater treatment plants (18, 31). Particularly in
phosphate-removing plants, due to the lack of phosphate-accumulating
isolates, little information is available on the physiological
mechanisms underlying nitrite accumulation and, hence, the importance
of the present study.
 |
MATERIALS AND METHODS |
Organism and culture conditions.
Pseudomonas sp.
strain JR12, previously described as Pseudomonas stutzeri
(28), was isolated from a fluidized-bed reactor used for
nitrate removal in intensive fish culture systems (1). The
strain, deposited in the German Collection of Microorganisms and Cell
Cultures (DSM 12019), reveals similarities to P. stutzeri in
its fatty acid profile and metabolic properties. Partial sequencing of
the 16S rRNA gene classified this bacterium in RNA group I with
99% analogy to Pseudomonas putida and 96% analogy to
P. stutzeri. The bacterium was cultured in medium containing
the following (per liter): Na-acetate · 3H2O, 5.67 g; NH4Cl, 1 g;
MgSO4 · 7H2O, 0.6 g;
KH2PO4, 0.4 g;
Na2S2O3 · 5H2O,
0.1 g; CaCl2 · 2H2O, 0.07 g; Tris
buffer (hydroxymethyl aminomethane), 12 g; and 2 ml of a
trace mineral solution (30). The pH was adjusted to 7.0 with 6 N HCI.
Experimental protocol.
Studies were conducted with cells
harvested during the late log phase of growth (after 4 to 5 days).
Cells were washed twice and resuspended in the above-described medium
with the following modifications. Phosphate was omitted or supplied to
the medium as indicated, and either acetate or butyrate served
as the electron and carbon donor while nitrate or nitrite served as
electron acceptors (at concentrations indicated for each of the
different experiments). Experiments were conducted in a
temperature-controlled (30°C) incubation vessel (300 ml), placed on a
magnetic stirrer and fitted with nitrate, pH, and oxygen-temperature
electrodes. Anaerobic conditions in the vessel were obtained by
continuous flushing with prepurified nitrogen gas. Overpressure within
the incubation vessel prevented oxygen penetration, as verified by
continuous oxygen monitoring of the medium in the absence of cells.
Aerobic conditions were obtained by continuous flushing of the
incubation vessel with compressed, sterile air. The experiments were
initiated by adding acetate or butyrate. Periodically, samples were
withdrawn for determination of ammonia, nitrite, nitrate, phosphate,
and protein. The various incubations were conduced in triplicate. Since
similar trends in changes of the examined parameters were observed in
all replicates (analysis of covariance), results of only one run are
depicted. An increase in pH (not exceeding 0.5 units) was measured in
all experiments. Ammonia concentrations decreased in
correspondence with the increase in bacterial biomass in the medium.
Vmax values for nitrate and nitrite during each run were obtained by nonlinear regression analyses of at least 30 data
points based on Michaelis-Menten kinetics using the Enzfitter software
program (Elsevier-Biosoft, Amsterdam, The Netherlands).
Phosphate uptake assays with treated cells.
Phosphate uptake
by cells incubated with the H+-ATPase inhibitor,
N,N'-dicyclohexylcarbodiimide (DCCD), or with the uncoupler, carbonyl cyanide 3-chlorophenylhydrazone (CCCP), or by osmotic shock-treated cells were examined after EDTA treatment of the cells.
Cells were three times washed with Tris buffer (pH = 7) containing
50 µg of chloramphenicol per ml. After 3 min of preincubation of cell
suspension at 30°C, a 1 mM concentration of sodium EDTA (pH = 7)
was added. After 10 min, MgSO4 was added to a final
concentration of 10 mM. Hereafter, cells were washed once with Tris
buffer (pH = 7) containing 50 µg of chloramphenicol per ml and
10 mM MgSO4, stored on ice, and assayed within 2 h.
DCCD was added at a final concentration of 5 µM and CCCP was added at
a final concentration of 3 µM. Osmotic shock treatment was conducted
according to the method of Neu and Heppel (19). Cells (1 g,
wet weight) were suspended in 80 ml of 20% sucrose-0.03 M Tris-HCl
(pH 8, 24°C). Sodium EDTA (1 mM) was added, and the cell suspension
was placed on a shaker (150 rpm) for 15 min. After centrifugation
(13,000 × g at 4°C), the supernatant was removed and
the thoroughly drained pellet was rapidly dissolved in a volume of cold
water equal to that of the original volume of the suspension. The cell
suspension was placed for 10 min in an ice bath situated on a rotary
shaker. Hereafter, the cells were centrifuged (13,000 × g at
4°C) and resuspended in the experimental medium.
Cytochrome studies.
Cells cultured with acetate as the
electron and carbon donor and nitrate as the electron acceptor were
harvested in the late log phase of growth, washed with a 50 mM
concentration of Tris buffer (pH 7.1), and resuspended in the same
buffer at the specified concentration. Cytochrome c redox
kinetics were performed in closed 3-ml cuvettes using a Hitachi (model
U-3000) double-beam spectrophotometer. Changes in absorbance at
553 nm in the sample cuvette, containing acetate-supplemented cells,
were recorded against a reference cuvette containing fully
oxidized cells by the addition of solid ferricyanide. Antimycin A was
dissolved in N,N-dimethylformamide (13 µM) and was added
to a final concentration of 20 µg/ml.
Analytical procedures.
Total ammonia (NH3 and
NH4+) was determined as described by Scheiner
(23), nitrite was measured according to the method of Strickland and Parsons (24), nitrate was measured with a
specific nitrate electrode (Radiometer, Copenhagen, Denmark) amplified with a pH meter (model PHM92; Radiometer), and phosphate (soluble orthophosphate) was measured according to the method of Golterman et
al. (11). Protein was determined according to the method of
Markwell et al. (17) with bovine serum albumin as the
standard. Oxygen and temperature were measured with a YSI (model 57)
temperature-oxygen probe (Yellow Springs Instruments).
Statistical analysis.
Triplicate runs were made for each
experimental condition tested. Variations between the mean values of
each of the runs were less than 10% as determined by the analysis of covariance.
 |
RESULTS |
To test differences in phosphate uptake in the presence of
different electron acceptors, phosphate uptake by
Pseudomonas sp. strain JR 12 was examined in
acetate-supplemented medium in the presence of oxygen or under anoxic
conditions with either nitrate or nitrite as the electron acceptor
(Fig. 1). It was found that phosphate was
removed from the medium in the presence of oxygen (Fig. 1A) and nitrate
(Fig. 1B) and was not removed when nitrite served as the final electron
acceptor (Fig. 1C). Phosphate uptake with oxygen and nitrate took place
in excess of the metabolic requirements of the cells since phosphate
was released into the medium when the oxygen supply was stopped or when
all nitrate was depleted (Fig. 1A and B, respectively). Phosphate had a
profound effect on nitrite removal by the cells since intermediate
nitrite accumulation during nitrate reduction by acetate-supplemented Pseudomonas sp. strain JR12 was considerably lower in medium
devoid of phosphate than it was in medium with phosphate (not shown). Also, when nitrite was used as the sole electron acceptor, nitrite reduction was markedly depressed by the presence of phosphate (Table
1).

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FIG. 1.
Changes in nitrate ( ), nitrite ( ), and phosphate
( ) upon incubation of Pseudomonas sp. strain JR12
(protein content, 0.3 g/liter) in phosphate-containing culture medium
(see Materials and Methods) under aerobic conditions (arrow indicates
time at which aeration was stopped) (A) and anoxic conditions with
nitrate (B) or nitrite (C) as the final electron acceptors. Acetate
(initial concentration, 15 mM) was used as the electron and carbon
donor.
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|
The observation that nitrate-respiring cells were capable of phosphate
uptake despite the intermediate nitrite accumulation (>2 mM nitrite)
in the medium (Fig. 1B) suggested that the lack of phosphate removal by
nitrite-respiring cells was not caused by toxicity of nitrite exerted
on the phosphate uptake mechanism. The observed lack of phosphate
uptake in nitrite- but not in nitrate- or oxygen-respiring cells
pointed to the involvement of the respiratory chain in phosphate
uptake. To test this hypothesis, phosphate uptake assays were conducted
in the presence of the H+-ATPase inhibitor DCCD. It was
found that phosphate uptake by the Pseudomonas sp. strain JR
12 was an energy-dependent process, as phosphate uptake was severely
inhibited when this inhibitor was added to nitrate-respiring cells
(Table 2). Additional evidence for active
phosphate uptake was obtained by the finding that phosphate uptake was
significantly impaired in osmotic shock-treated cells (Table 2). Both
treatments specifically affected phosphate uptake since cell
respiration was only mildly affected as seen by the relatively small
differences between nitrate removal rates of treated and control cells
(Table 2). Addition of the uncoupler CCCP also resulted in reduced
phosphate uptake; however, this reduction was less than that seen in
DCCD or osmotic shock-treated cells (Table 2).
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TABLE 2.
Effect of different treatments on phosphate uptake and
nitrate reduction rates by Pseudomonas sp. strain
JR12a
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|
The effect of the acceptor controlled, electron transport mode and
phosphate uptake were demonstrated by the following set of experiments.
When antimycin A, a compound blocking the electron flow between
cytochromes b and c (12), was added to
acetate-supplemented cells respiring on nitrate, the cells
shifted from phosphate uptake to phosphate release (Fig.
2). It was concluded, therefore, that energy transfer to cell components responsible for phosphate uptake occurred downstream of the antimycin A block. Upon examination of
the oxidation state of cytochrome c in
nitrate-respiring, acetate-supplemented cells, it was evident
that phosphate addition caused a noticeable oxidation of this
cytochrome c while no oxidation occurred when antimycin
A was added to similar incubated cells (Fig. 3A and B, respectively). Additional evidence for
the involvement of cytochrome c in phosphate uptake was
provided with aerobically incubated cells, which shifted from phosphate
uptake to phosphate release upon addition of antimycin A (not shown).
We previously demonstrated (28) that butyrate-supplemented
Pseudomonas sp. strain JR12 cells differ from
acetate-supplemented ones in their electron transport mechanism.
Whereas acetate donates electrons upstream in the electron transport
chain, donation of electrons by butyrate takes place downstream in the
cytochrome c region. An examination of the phosphate uptake
characteristics of butyrate-supplemented cells revealed that phosphate
uptake by these cells occurred not only with nitrate (not shown) but,
in contrast to acetate-supplemented cells, also with nitrite as
the sole electron acceptor (Fig.
4). However, as with acetate, nitrite
reduction by butyrate-supplemented cells was affected by the presence
of phosphate in the medium (Fig. 4).

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FIG. 2.
Changes in nitrate ( ), nitrite ( ), and phosphate
( ) concentrations in anoxically incubated Pseudomonas sp.
strain JR12 (protein content, 0.6 g/liter) in culture medium (see
Materials and Methods) containing nitrate as the final electron
acceptor and acetate (initial concentration, 10 mM) as the electron and
carbon donor. At the indicated time antimycin A was added to the medium
at a concentration of 20 µg/ml.
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FIG. 3.
Absorbance at 553 nm of Pseudomonas sp.
strain JR12 cultured in acetate-supplemented growth medium (see
Materials and Methods), washed and resuspended in Tris buffer (pH 7.2)
containing 5 mM acetate. Absorbance was monitored after the addition of
nitrate (0.71 mmol of KNO3/liter) and phosphate (1.8 mmol
of KH2PO4/liter) at the indicated times in the
absence (A) or presence (B) of antimycin A (20 µg/ml). The absorbance
was read against reference cuvettes containing ferricyanide-oxidized
Pseudomonas sp. strain JR12 at the same density (protein
content, 1.65 g/liter) as the sample cuvettes. Nitrate addition is
indicated by N and phosphate additions are indicated by P.
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FIG. 4.
Changes in nitrite ( ) and phosphate ( )
concentrations in anoxically incubated Pseudomonas sp.
strain JR12 (protein content, 0.4 g/liter) in culture medium (see
Materials and Methods) in which nitrite served as the electron acceptor
and butyrate (initial concentration, 5 mM) served as the carbon and
electron donor. The dotted line indicates the decrease in nitrite
concentrations during incubation of Pseudomonas sp. strain
JR12 under similar conditions in medium devoid of phosphate.
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|
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DISCUSSION |
Active phosphate uptake has been demonstrated in several
denitrifying species (7, 16, 20, 21). Primary and secondary systems are responsible for the active transport of phosphate in these
bacteria (29). In the present study, evidence for the activity of a primary, so called, phosphate-specific transport (Pst)
system in Pseudomonas sp. strain JR12, was provided by
the findings that (i) inorganic phosphate uptake was highly
reduced by the H+-ATPase inhibitor DCCD and (ii) the
uptake of phosphate was inactivated by osmotic shock, which is typical
for all binding-protein-dependent systems but not for secondary
transport systems (10). The presence of a secondary
phosphate uptake system, driven by electrochemical ion (mostly proton)
gradients over the cytoplasmic membrane (29), was
demonstrated by the partial inhibition of phosphate uptake by cells
incubated with the protonophore CCCP.
Very little information is available on the energy coupling between the
respiratory chain and phosphate transport in bacteria. Our finding that
nitrite-respiring cells, contrary to oxygen- and nitrate-respiring
cells, were incapable of phosphate uptake provided a possible clue for
a better understanding of the link between active phosphate uptake and
the electron transport mode in this organism. Based on our results it
can be concluded that phosphate uptake in excess of metabolic
requirements takes place not only under conditions in which the cells
are supplied with ample amounts of carbon and electron donors on one
hand and electron acceptors on the other. Instead, the mode of electron
transfer and in particular the involvement of specific redox carriers
play an important role. This is illustrated in the present study by the
finding that upon addition of antimycin A to oxygen- and
nitrate-respiring cells, cells abruptly switched from phosphate uptake
to phosphate release despite no noticeable changes in oxygen and
nitrate respiration rates. This response can be explained by the
finding that the activity of a c-type cytochrome, downstream
of the antimycin A block, was an essential intermediate in the
phosphate uptake by this organisms. The finding that
acetate-supplemented, nitrite-respiring cells were incapable of
phosphate uptake probably stems from the fact that under these specific
conditions cytochrome c is impaired with respect to serving
as an intermediate electron carrier in the phosphate uptake mechanism
of this organism. In a previous study with Pseudomonas sp.
strain JR12 (28), we found that the reduction state of
cytochrome c changed with different combinations of electron
donors and acceptors. More reduced cytochrome c was found in
butyrate-supplemented, nitrite-respiring cells and
acetate-supplemented, nitrate-respiring cells than in cells incubated
with acetate and nitrite. Based on these results we suggest that at the
relatively high oxidation state of cytochrome c in the
latter cells, no electrons are shuttled to redox centers that operate
at lower redox potentials and are involved in the active phosphate
transport mechanism of this organism. A similar redox control was
proposed to underlie the link between solute uptake and respiratory
electron transfer in Escherichia coli (13). The
observation that the presence of phosphate negatively affected the
reduction rates of nitrite in butyrate-supplemented, nitrite-respiring
cells and led to a relatively large accumulation of nitrite in
acetate-supplemented, nitrate-respiring cells is a further indication
for a cytochrome c-mediated link between the respiratory
pathway and the phosphate uptake mechanism in this organism.
Several investigators (8, 15) found that nitrite
impaired phosphate removal by enrichment cultures obtained from
phosphate-removing wastewater plants. In these systems, nitrite
accumulation often results from incomplete denitrification due to
several factors
among those, the presence of oxygen (9,
14), the quantity and type of carbon source (28, 31),
pH (2, 5, 25), light inhibition (3), and
differential kinetics of nitrate and nitrite reductases (2,
6). In addition to denitrifiers, also nitrifiers may cause
nitrite accumulation in wastewater treatment plants due to incomplete
oxidation of ammonia to nitrate (22). A recent finding
(18) with denitrifiers from such plants, in which the direct
toxicity of nitrite was found responsible for impaired phosphate
removal, could not be confirmed in the present study. We found that,
despite the presence of nitrite, cells were capable of phosphate uptake
when either acetate was replaced by butyrate or when, in addition to
nitrite, nitrate was present in acetate-supplemented cells.
In conclusion, nitrite accumulation is a common phenomenon in
wastewater plants as well as in other denitrifying environments. In
this study we demonstrated that in the Pseudomonas isolate examined, the presence of phosphate inhibits nitrite reduction. Experimental evidence was provided for the role of a c-type
cytochrome in both nitrite reduction and phosphate uptake in this
bacterium. Based on this evidence we suggest that a cytochrome
c-mediated electron shuttle to both nitrite reductase and a
cytoplasmic active phosphate transport mechanism underlies the observed
phosphate inhibition of nitrite reduction. To what extent these results are of wider significance in environments where both denitrification and phosphate removal occur, such as enhanced biological phosphate removal plants, remains to be examined.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Animal Science, Faculty of Agricultural, Food, and Environmental
Quality Sciences, The Hebrew University of Jerusalem, P.O. Box 12, Rehovot 76100, Israel. Phone: 972-8-9489302. Fax: 972-8-9465763. E-mail: vanrijn{at}agri.huji.ac.il.
 |
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Applied and Environmental Microbiology, December 2000, p. 5236-5240, Vol. 66, No. 12
0099-2240/00/$04.00+0
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