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Applied and Environmental Microbiology, March 2000, p. 1209-1212, Vol. 66, No. 3
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Atypical Polyphosphate Accumulation by the
Denitrifying Bacterium Paracoccus denitrificans
Yoram
Barak and
Jaap
van Rijn*
Department of Animal Science, Faculty of
Agricultural, Food and Environmental Quality Sciences, The Hebrew
University of Jerusalem, Rehovot 76100, Israel
Received 25 August 1999/Accepted 1 December 1999
 |
ABSTRACT |
Polyphosphate accumulation by Paracoccus denitrificans
was examined under aerobic, anoxic, and anaerobic conditions.
Polyphosphate synthesis by this denitrifier took place with either
oxygen or nitrate as the electron acceptor and in the presence of an
external carbon source. Cells were capable of poly-
-hydroxybutyrate
(PHB) synthesis, but no polyphosphate was produced when PHB-rich cells were incubated under anoxic conditions in the absence of an external carbon source. By comparison of these findings to those with
polyphosphate-accumulating organisms thought to be responsible for
phosphate removal in activated sludge systems, it is concluded that
P. denitrificans is capable of combined phosphate and
nitrate removal without the need for alternating anaerobic/aerobic or
anaerobic/anoxic switches. Studies on additional denitrifying isolates
from a denitrifying fluidized bed reactor suggested that
polyphosphate accumulation is widespread among denitrifiers.
 |
TEXT |
Due to environmental problems
associated with phosphorus discharge, phosphorus removal has become a
standard treatment practice in wastewater purification plants. Enhanced
biological phosphorus removal (EBPR) is the most common biological
phosphorus removal method. The method is based on enrichment of
so-called polyphosphate-accumulating organisms (PAOs) through recycling
of the sludge between anaerobic and aerobic zones. Under these
conditions, the PAOs release phosphorus in the anaerobic zone and store
phosphorus as polyphosphate in the aerobic zone. Phosphorus is
subsequently removed from the process stream by harvesting a fraction
of the phosphorus-rich bacterial biomass (26).
Recently, it was demonstrated that, not only under aerobic conditions
but also under anoxic conditions, i.e., with nitrate as the electron
acceptor, some PAOs are capable of polyphosphate accumulation (3,
6, 12, 15). Since attempts to isolate bacteria with all
characteristics attributed to PAOs have failed so far, information on
these organisms is based on studies with crude sludge samples and
enrichment cultures obtained from EBPR plants. On the basis of these
studies, the following set of metabolic properties has been attributed
to PAOs (22).
Under anaerobic conditions, acetate or other
low-molecular-weight organic compounds are converted to
polyhydroxyalkanoates (PHA), polyphosphate and glycogen are
degraded, and phosphate is released. Under aerobic or anoxic
conditions, PHA is converted to glycogen, phosphate is assimilated, and
polyphosphate is intracellularly produced. Under the latter conditions,
bacterial growth and phosphate uptake are regulated by the energy
released from the breakdown of PHA.
We studied the phosphorus dynamics in a prototype treatment system used
for removal of organic matter and inorganic nitrogen from recirculating
fish culture systems. The system comprised a nitrifying filter for
oxidation of ammonia to nitrate, a digestion basin for anaerobic
digestion of organic matter, and a denitrifying filter for reduction of
nitrate to nitrogen gas (1). It was found that much of the
phosphorus in the system was retained in the denitrifying biomass (up
to 11% of the bacterial dry weight) within the fluidized bed reactor
(2). The fluidized bed reactor, containing the denitrifiers,
received a continuous supply of water from the digestion basin, devoid
of oxygen and rich in volatile fatty acids and nitrate. Conditions
within the reactor were permanently anoxic, as low levels of nitrate
were present in the reactor effluent at all times. Upon examination of
the phosphate uptake characteristics of the denitrifying bacteria
isolated from the fluidized bed reactor, we found that most of these
organisms were capable of polyphosphate synthesis (unpublished
data). In the present study, results are presented on phosphorus
accumulation by one of these isolates (Paracoccus
denitrificans).
Organism.
P. denitrificans was isolated from a
fluidized-bed reactor used for nitrate removal in intensive
fish-culture systems (28). Identification of P. denitrificans was based on the API-NE system, consisting of eight
conventional tests and 12 assimilatory tests (23).
Culture conditions.
P. denitrificans cells were cultured
in medium containing (per liter) the following components:
Na-acetate · 3H2O, 5.67 g; NH4Cl,
1 g; MgSO4 · 7H2O, 0.6 g;
KH2PO4, 0.4 g;
Na2S2O3 · 5H2O, 0.1 g; CaCl2 · 2H2O, 0.07 g;
Tris buffer (hydroxymethyl aminomethane), 12 g; and 2 ml of a
trace mineral solution (29). The pH was adjusted to 7.0 with
6 N HCl. Acetate was used as a carbon and electron donor. Studies were
conducted with cells harvested during the late log phase of growth
(after 4 to 5 days). Cells were washed twice and resuspended in the
medium described above. Experiments were conducted in a
temperature-controlled (30°C) incubation vessel (300 ml) placed on a
magnetic stirrer and fitted with nitrate, pH, and oxygen and
temperature electrodes. Cells were incubated either under aerobic
conditions, by means of flushing the medium with sterile compressed
air, or under anaerobic conditions, obtained by continuous flushing of
the vessel with prepurified nitrogen gas. Overpressure within the
incubation vessel prevented oxygen penetration, as verified by
continuous oxygen monitoring. Anoxic incubation conditions refer to
those conditions in which the cells were incubated in the presence of
nitrate and the absence of oxygen. Anaerobic conditions refer to
conditions in which neither oxygen nor nitrate was present. The
experiments were initiated by adding acetate at concentrations as
indicated. Periodically, samples were withdrawn for determination of
nitrate, nitrite, ammonia, phosphate, acetate, and protein in the
medium and for determination of intracellular poly-
-hydroxybutyrate
(PHB), total polysaccharides, and total phosphorus contents. Each of
the various incubation conditions was examined in triplicate. Results
presented are the average values of triplicate runs under each of the
conditions tested. Variations between the mean values of each run were
less than 10% as determined by the analysis of co-variance.
Analytical procedures.
Total ammonia (NH3 and
NH4+) was determined as described by Scheiner
(24), nitrite was measured according to Strickland and Parsons (25), nitrate was measured with a specific nitrate
electrode (Radiometer, Copenhagen, Denmark) amplified with a pH meter
(Radiometer, model PHM92), and phosphate was measured (soluble
orthophosphate) according to the method of Golterman et al.
(8). Protein was determined according to a modified Lowry
procedure (19) with bovine serum albumin as the standard.
Oxygen and temperature were measured with a YSI model 57 temperature
and oxygen probe (Yellow Springs Instruments, Yellow Springs, Ohio).
Total phosphorus (8), polysaccharide (9), and PHB
(18) contents of the cells were determined on concentrated
cell suspensions (centrifugation at 8,000 × g) and
expressed as milligrams per gram of protein. Intracellular polyphosphate bodies were determined by electron microscopy after negative staining of the cells with uranyl acetate (4).
Acetate in the medium was determined with a Hewlett Packard (model
5890) gas chromatograph equipped with an 1/8-in.-internal-diameter
stainless-steel column (length, 200 cm) packed with 60-80 mesh
Chromosorb W. Injector, oven, and flame ionization detector
temperatures were set at 170, 140, and 175°C, respectively. Nitrogen
was used as the carrier gas at a flow rate of 6 ml/min.
Polyphosphate dynamics during aerobic, anaerobic, and anoxic
incubation.
Aerobic incubation of P. denitrificans in
the presence of acetate resulted in a decrease of phosphate in the
medium (Fig. 1A). Phosphate removal took
place as long as acetate was available. In additional experiments it
was found that, once acetate was depleted under aerobic conditions,
phosphate was released, and it was once more assimilated upon acetate
addition (data not shown). During aerobic incubation of the organisms,
the PHB content of the cells increased and their total phosphorus
content increased while their glycogen content increased during the
initial stage of aerobic incubation (Fig. 1B). Protein concentrations
increased during aerobic incubation (Fig. 1C). When the cells were
switched to anaerobic conditions, their phosphorus content decreased
and phosphate was released into the medium. Under these conditions, the
PHB and glycogen contents of the cells decreased and acetate was not
assimilated (Fig. 1A and B). Growth, as measured by changes in protein
concentrations in the medium, ceased with the depletion of the
intracellular phosphorus pool (Fig. 1C). Anoxic incubation (with
nitrate) of P. denitrificans, preincubated, before
initiation of the anoxic incubation, for 12 h without electron
donor and acceptor resulted in a decrease of nitrate, acetate, and
phosphate concentrations in the medium (Fig.
2A). The cells' total phosphorus content
increased and their glycogen content increased during the initial stage
of anoxic incubation, while the PHB content of the cells was low
throughout the anoxic incubation period (Fig. 2B). Under these
conditions, cell growth took place as is evident from the increase in
protein concentrations (Fig. 2C). Upon nitrate depletion (t = 110 min), phosphate was released into the medium and no acetate
was assimilated. Glycogen and phosphorus contents of the cells
decreased, while the PHB content of the cells increased after the
depletion of the intracellularly stored phosphorus pool. As is evident
from the changes in protein concentrations, cell growth ceased with the
depletion of intracellular phosphorus (Fig. 2C). An electron
microscopic examination of uranyl acetate-stained cells harvested after
110 min of incubation revealed the presence of a considerable number of
polyphosphate bodies (data not shown). It should be noted that higher
phosphorus contents were found in cells incubated for longer periods
under denitrifying conditions in the presence of phosphate. Batch
growth of P. denitrificans under these conditions resulted
in a phosphorus content as high as 9% (on a dry cell weight basis) in
cells harvested in the late log phase of growth (data not shown).

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FIG. 1.
Changes in acetate and inorganic phosphate (A), cellular
glycogen, phosphorus, and PHB contents (B), and bacterial protein
concentration (C) in the medium during aerobic and anaerobic incubation
of P. denitrificans. Oxygen was kept at saturation levels
during the aerobic incubation period.
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FIG. 2.
Changes in acetate, nitrate, and inorganic phosphate
(A), cellular glycogen, phosphorus, and PHB contents (B), and bacterial
protein concentration (C) in the medium during anoxic and anaerobic
incubation of P. denitrificans.
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PHB as an internal carbon and electron donor.
The possible
role of PHB as a carbon and energy source was examined by incubation of
P. denitrificans cells in medium without an external carbon
donor and with nitrate (Fig. 3). PHB-rich
cells were obtained by preincubating the cells under anaerobic
conditions for 12 h in the presence of acetate. Under these
conditions, a decrease in the PHB content of the cells (Fig. 3B)
coincided with a release of acetate into the medium and a decrease in
nitrate (Fig. 3A). Phosphate was not assimilated (Fig. 3A). During this incubation period, only slight changes were observed in the total phosphorus and glycogen contents of the cells (Fig. 3B). No cell growth
was observed under these conditions (Fig. 3C).

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FIG. 3.
Changes in acetate, nitrate, and inorganic phosphate
(A), cellular glycogen, phosphorus, and PHB contents (B), and bacterial
protein concentrations (C) in the medium during anoxic incubation of
PHB-rich P. denitrificans in the absence of an external
carbon source.
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Most studies concerned with biological phosphorus removal have been
conducted on crude sludge samples or on enrichment cultures
obtained
from EBPR plants. The main features of the PAOs thought
to underlie
phosphorus removal in these plants are: (i) the requirement
for
alternating anaerobic/ aerobic (anoxic) conditions for phosphorus
removal, (ii) the ability to produce PHAs, and (iii) the ability
to
grow on intracellular PHA in the absence of an external carbon
source.
Table
1 summarizes the main physiological
characteristics
of PAOs in comparison to the
P. denitrificans isolate examined
in this study. In contrast to PAOs,
polyphosphate synthesis by
P. denitrificans was found to
take place only in the presence
of an external carbon donor under
either aerobic or anoxic conditions.
Furthermore, unlike PAOs,
P. denitrificans was unable to utilize
PHB as an energy source for
polyphosphate synthesis. With PHB
and without an external carbon
source,
P. denitrificans was able
to reduce nitrate.
However, this mode of respiration resulted
in no measurable growth.
Studies on the effect of the addition
of an external carbon source on
phosphorus removal and denitrification
have resulted in conflicting
data. In some studies (
16,
30),
phosphate uptake by
organisms present in activated sludge samples
was found to be inhibited
under aerobic or anoxic incubation in
the presence of carbon. Also,
Meinhold et al. (
20) reported
a significant release of
intracellularly stored phosphorus by
activated sludge samples upon
addition of acetate in the anoxic
treatment stage. Hascoet and Florentz
(
10), however, reported
on a simultaneous uptake and release
of phosphorus under anoxic
conditions in the presence of an external
carbon source, while
van Niel et al. (
27) showed that, in
the presence of nitrate,
phosphorus release and acetate uptake by
activated sludge organisms
were severely inhibited. The studies
described above, as well
as most other studies on denitrification and
phosphate removal
in wastewater treatment plants (
12,
21),
are based on the
assumption that denitrifying PAOs with the
physiological characteristics
summarized in Table
1 are the only PAOs
present in these environments.
The present study demonstrates also that
heterotrophic denitrifiers
like
P. denitrificans exhibit the
ability to synthesize polyphosphate.
Studies on a number of
denitrifying isolates in our laboratory
(unpublished data) revealed
that this mode of phosphorus accumulation
is not restricted to
P. denitrificans. In this respect, it is
worthwhile to note that one
of these isolates,
Pseudomonas sp.
strain JR12, stored
polyphosphate in a mode similar to that of
P. denitrificans
without being capable of PHB synthesis. This
latter finding might serve
as additional evidence for the fact
that polyphosphate synthesis by
these organisms is not dependent
on internally stored carbon reserves.
Although information on
combined polyphosphate accumulation and nitrate
reduction in true
denitrifiers (not PAOs) is limited to
P. denitrificans (
7,
13), it seems that, on the basis of
results obtained with other
denitrifiers in our laboratory, this
ability may be a common trait
among many denitrifiers. The most
striking feature of the mode
of phosphate accumulation exhibited by
P. denitrificans and other
denitrifiers examined in our
laboratory is their ability to synthesize
polyphosphate without the
need for alternating anaerobic/aerobic
(anoxic) conditions. Therefore,
the significance of this finding
is that, contrary to the common
assumption among wastewater engineers,
biological phosphorus and
nitrate removal may be conducted in
one treatment step. Indeed,
long-term operation of a denitrifying
reactor used for nitrate removal
from an intensive aquaculture
system resulted in a considerable
withdrawal of phosphate by the
denitrifying organisms in the reactor
(
2).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Animal Science, Faculty of Agricultural, Food and Environmental Quality Sciences, The Hebrew University of Jerusalem, P. O. Box 12, Rehovot 76100, Israel. Phone: 972-8-9481302. Fax: 972-8-9465763. E-mail: vanrijn{at}agri.huji.ac.il.
 |
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Applied and Environmental Microbiology, March 2000, p. 1209-1212, Vol. 66, No. 3
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
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