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Applied and Environmental Microbiology, May 2000, p. 1826-1833, Vol. 66, No. 5
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
The Chromosomal Arsenic Resistance Genes of Thiobacillus
ferrooxidans Have an Unusual Arrangement and Confer Increased
Arsenic and Antimony Resistance to Escherichia
coli
Bronwyn G.
Butcher,
Shelly M.
Deane, and
Douglas E.
Rawlings*
Department of Microbiology, University of
Stellenbosch, Matieland, South Africa 7602
Received 6 December 1999/Accepted 11 February 2000
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ABSTRACT |
The chromosomal arsenic resistance genes of the acidophilic,
chemolithoautotrophic, biomining bacterium Thiobacillus
ferrooxidans were cloned and sequenced. Homologues of four
arsenic resistance genes, arsB, arsC,
arsH, and a putative arsR gene, were
identified. The T. ferrooxidans arsB (arsenite export) and
arsC (arsenate reductase) gene products were functional
when they were cloned in an Escherichia coli ars deletion
mutant and conferred increased resistance to arsenite, arsenate, and
antimony. Therefore, despite the fact that the ars genes
originated from an obligately acidophilic bacterium, they were
functional in E. coli. Although T. ferrooxidans is gram negative, its ArsC was more closely related to the ArsC molecules of gram-positive bacteria. Furthermore, a functional trxA (thioredoxin) gene was required for ArsC-mediated
arsenate resistance in E. coli; this finding confirmed the
gram-positive ArsC-like status of this resistance and indicated that
the division of ArsC molecules based on Gram staining results is
artificial. Although arsH was expressed in an E. coli-derived in vitro transcription-translation system, ArsH was
not required for and did not enhance arsenic resistance in E. coli. The T. ferrooxidans ars genes were arranged in
an unusual manner, and the putative arsR and
arsC genes and the arsBH genes were translated
in opposite directions. This divergent orientation was conserved in the
four T. ferrooxidans strains investigated.
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INTRODUCTION |
Thiobacillus ferrooxidans
is an acidophilic (optimum pH, 1.8 to 2.5), obligately
chemolithotrophic bacterium that obtains its energy through oxidation
of ferrous iron to ferric iron or oxidation of reduced inorganic sulfur
compounds to sulfuric acid. It is a member of a consortium of bacteria
(which includes Thiobacillus caldus and Leptospirillum
ferrooxidans) that is used in commercial biooxidation processes to
recover gold from arsenopyrite ores (22). Although recent
analysis of microbial populations in continuous-flow biooxidation tanks
has revealed that T. ferrooxidans may not be as dominant as
was once thought, this organism is nevertheless usually present in such
tanks (21). Total arsenic levels greater than 13 g
liter
1 may be present in arsenopyrite biooxidation tanks,
and therefore the microorganisms present must have a mechanism of
resistance to arsenic (8).
Plasmid-associated arsenic efflux resistance mechanisms have been known
for many years and have been extensively reviewed (5, 23, 30-32,
35). Although the number of components of these systems varies,
in the case of Escherichia coli plasmids R773 and R46, as
well as Acidiphilium multivorum plasmid pKW301 (34), as many as five genes (arsRDABC) are
present. In the case of R773, the genes are transcribed in a single
operon. The arsR and arsD genes encode repressors
that control the basal and upper levels of ars operon
expression, while the arsABC genes encode the structural
components of the arsenic resistance mechanism. ArsA is an ATPase which
forms a complex with ArsB, the transmembrane arsenite efflux pump. ArsC
is a small, cytoplasmically located arsenate reductase which reduces
arsenate to arsenite, which can then be pumped out of the cell. The
ArsB protein is capable of exporting arsenite even in the absence of
ArsA (9).
The arsenic resistance systems of Staphylococcus plasmids
pSX267 and pI258, as well as the chromosomally located arsenic
resistance systems of E. coli (4) and
Pseudomonas aeruginosa (3), consist of only three
genes, arsRBC. Nevertheless, the ars operons are capable of exporting arsenate, arsenite, and antimony oxyanions in the
absence of arsA by using membrane potential rather than ATP
as an energy source. Recently, an arsenic resistance system which
consists of arsRBC and a fourth open reading frame (ORF) of
unknown function was discovered in the skin element of
Bacillus subtilis (28). An arsenic resistance
system has been discovered in Tn2502 located on plasmid pYV
of Yersinia enterocolitica, and this system consists of
arsRBC, as well as a divergently transcribed gene,
arsH (17). The function of arsH is not
known, but the presence of this gene either in cis or in
trans is essential for arsenic resistance in Y. enterocolitica.
Here we describe isolation and analysis of the evolutionary
relationships of the arsenic resistance genes of T. ferrooxidans. We found that these genes are functional in E. coli and have an unusual divergent arsCRBH operon
structure, which appeared to be conserved in all of the T. ferrooxidans strains which we examined.
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MATERIALS AND METHODS |
Bacterial strains, plasmids, primers, and media.
The
strains, plasmids, and primers used in this study are shown in Table
1. E. coli strains were grown
on Luria-Bertani medium (25). T. ferrooxidans
strains were grown in tetrathionate medium or iron sulfate medium
(19) at 30°C. Ampicillin (100 µg/ml), chloramphenicol
(20 µg/ml), and tetracycline (20 µg/ml) were used as required.
DNA techniques, sequencing, and analysis.
A T. ferrooxidans ATCC 33020 gene bank consisting of 4- to 9-kb
fragments obtained from a partial Sau3A digest cloned into the BglII site of the suicide vector pEcoR251
(20) was transformed into E. coli ars deletion
mutant AW3110, which was made competent by the simple and efficient
method (10). Plasmid preparation, restriction endonuclease
digestion, gel electrophoresis, ligation, and Southern blot
hybridization were carried out by using standard methods
(20). Pulsed-field gel electrophoresis was carried out by
using a Beckman Geneline transverse alternating field electrophoresis apparatus. Labeling of probes, hybridization, and detection were performed by using a dioxigenin-dUTP nonradioactive DNA labeling and
detection kit (Roche). Sequences were determined by the dideoxy chain
termination method (27) by using a thermosequenase
fluorescently labeled primer cycle sequencing kit (Amersham Pharmacia
Biotech UK Ltd.). Sequencing reactions were performed with an
ALFexpress automated sequencer (Pharmacia Biotech, Uppsala, Sweden).
Results were analyzed by using the VAX-based Genetics Computer Group
Inc. sequence analysis package (version 7.1) and its associated
programs and the PC-based DNAMAN software (version 4.1) from Lynnon
BioSoft. Multiple sequence alignments were shaded by using the Genedoc Multiple Sequence Alignment Editor and Shading Utility (version 2.5.000). Comparison searches were performed by using the gapped-BLAST program of the National Center for Biotechnology Information (NCBI) (1). Homology trees were constructed by using the Multiple Sequence Alignment tool in DNAMAN.
Requirement for thioredoxin for arsenate resistance.
A
7.1-kb HindIII-BglII fragment of pTfars1a,
which contained the ars genes of T. ferrooxidans,
was cloned into pACYC digested with HindIII and
BamHI. The resulting clone, pTfarsCRBH-Cm, was used to test
pBluescriptSK-based plasmids in trans. E. coli BH2012, BH5262, and MC1061 were made competent with CaCl2 and were
transformed with pTfarsCRBH-Cm. E. coli BH5262 was also
transformed with pTrx6, pTTn1, and pTT150 (Table 1). All of the strains
mentioned above were streaked onto Luria agar plates (24)
containing 0, 2, 5, 7, 10, and 15 mM sodium arsenate and were incubated
at 37°C overnight.
PCR.
A PCR was performed with the primers described in Table
1, which were synthesized at the Synthetic DNA Laboratory, Department of Biochemistry, University of Cape Town. The reaction was performed with a Biometra Personal cycler by using Redhot Taq DNA
polymerase (Advanced Biotechnologies). After an initial denaturation
step consisting of 60 s at 94°C, 25 cycles consisting of 30 s at 94°C, 30 s at 57°C (for primers BBARSB and BBARSC) or
63°C (for primers ARSHF and ARSHR), and 90 s at 72°C were
performed. A final extension step consisting of 120 s at 72°C
before cooling to 25°C completed the reaction.
Arsenic and antimony resistance assays.
Constructs were
transformed into competent E. coli AW3110 cells. Assays to
determine resistance to arsenite and antimonite were carried out in
Luria broth (LB). In assays to determine resistance to arsenate, cells
were grown in low-phosphate medium (18) supplemented with 2 mM K2HPO4. Overnight cultures were diluted
100-fold into fresh medium containing the appropriate antibiotics and
different concentrations of sodium arsenite, potassium antimonite, or
sodium arsenate. The cultures were incubated at 37°C for 5 h in
the case of LB or for 12 h in the case of low-phosphate medium,
and the absorbance at 600 nm was determined. The incubation times used corresponded to the end of the log phase of growth of controls under
the same conditions.
In vitro transcription-translation analysis.
A prokaryotic
DNA-directed, E. coli S30 extract-based, in vitro
transcription-translation kit for circular DNA (Promega) was used to
analyze the polypeptides synthesized from clones that conferred arsenic
resistance and subclones. The [35S]methionine-labeled
translation products were separated on a sodium dodecyl
sulfate-polyacrylamide electrophoresis gel and detected by autoradiography.
Nucleotide sequence accession number.
The nucleotide
sequence determined in this study has been deposited in the GenBank
database under accession no. AF173880.
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RESULTS |
Cloning of the ars genes of T. ferrooxidans.
The E. coli ars operon deletion mutant (AW3110) was
transformed with a partial Sau3A plasmid bank, and colonies
were selected on the basis of their ability to complement the mutant on
LB plates containing 0.5 mM sodium arsenite. One plasmid (pTfars1a),
which contained a 7.4-kb insert and which retransformed E. coli AW3110 to arsenite resistance at a high frequency, was
selected for further study. The plasmid was mapped to determine the
positions of restriction endonuclease sites, as shown in Fig.
1, and a 7.1-kb
HindIII-BglII fragment was cloned into
pBluescriptSK (pTfars1b). The source of the insert DNA was confirmed by
Southern hybridization. A 5.3-kb internal
HindIII-StuI fragment was labeled and used to
probe the chromosomal DNA of T. ferrooxidans ATCC 33020 and
pTfars1b digested with PstI. The sizes of PstI
fragments that were 3.5 and 2.0 kb long and were inside the insert of
pTfars1b corresponded exactly to the sizes of PstI fragments
of T. ferrooxidans ATCC 33020 chromosomal DNA (data not
shown). This indicated that the insert DNA originated from T. ferrooxidans ATCC 33020, that a single copy was present, and that
no rearrangements in the region which included the two PstI
fragments occurred during cloning. Chromosomal DNA was also digested
with two rarely cutting 8-bp recognition sequence restriction enzymes,
PacI and SwaI, as well as with a combination of
both of these enzymes. Restriction fragments were separated by using pulsed-field gel electrophoresis and were hybridized to a T. ferrooxidans arsBH probe. Signals of hybridization to
PacI, SwaI, and PacI-SwaI fragments that were approximately 450, 620, and 280 kb long,
respectively, were obtained (data not shown). During chromosomal
mapping experiments (unpublished data), DNA fragments that were the
same sizes hybridized to a T. ferrooxidans ntrBC chromosomal
gene probe. This indicated that the two sets of genes are located
within 280 kb of each other and that the T. ferrooxidans ars
genes are located on the chromosome.

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FIG. 1.
pTfars1b and deletion clones constructed in this study.
The diagram shows the genes, ORFs, restriction endonuclease map, and
whether the clones were resistant to 0.5 mM arsenite in Luria agar
(AsIII) or 0.2 mM arsenate in low-phosphate medium
(AsV). ND, not determined. The directions and types of
vector promoters are indicated by labeled arrows.
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Sequence analysis of pTfars1b.
The entire insert DNA was
sequenced in both directions, and nine ORFs or partial ORFs were
identified (Fig. 1). The characteristics of the predicted products of
the nine ORFs are shown in Table 2. ORF 2 and ORF 3 were homologues of the arsB and arsC
genes of other bacteria, but unlike other systems, in which the
arsC gene is downstream of the arsB gene, the
T. ferrooxidans arsC gene was upstream of arsB
and the genes were divergently transcribed (Fig. 1). A fourth ORF was
found between the arsC and arsB genes, and this
ORF was also divergent with respect to arsB. This ORF exhibited weak but clear homology (30 to 40% identity) to many transcriptional regulators, including some members of the ArsR family.
Although the putative ArsR of T. ferrooxidans contains two
possible helix-turn-helix motifs, the positions of these motifs do not
correspond to the position of the helix-turn-helix DNA binding domain
identified in other ArsR proteins that have been studied. The putative
ArsR of T. ferrooxidans also does not contain the conserved
motif that includes two cysteine residues (ELCVCDL), which has been
shown to be required for binding of the arsenite inducer
(29). Downstream of the arsB gene was a homologue
of a gene previously identified as arsH. This gene was first
discovered in Y. enterocolitica (17) and has been
reported to be essential for arsenic resistance, although its function
is not known. By using a BLASTN search of the nonredundant
GenBank-EMBL-DDBJ-PDB database at the NCBI, we found a third homologue
of ArsH on the chromosome of Synechocystis sp. The predicted
amino acid sequence of the T. ferrooxidans ArsH-like
homologue was 68% identical to the predicted amino acid sequence of
the Y. enterocolitica molecule and 65% identical to the
amino acid sequence of the hypothetical protein of
Synechocystis sp. Alignment and phylogenetic analysis of all
of the ArsC proteins in the NCBI nonredundant database showed that ArsC
of T. ferrooxidans is most closely related to ArsC of the
P. aeruginosa chromosomal ars operon (Fig.
2). Both T. ferrooxidans and
P. aeruginosa are unusual in that although their ArsB
proteins cluster with the ArsB proteins of other gram-negative organisms (data not shown), their ArsC proteins are more closely related to the ArsC proteins of gram-positive bacteria. The ArsC arsenate reductases of gram-positive bacteria have four conserved cysteine residues (of which two are essential [13]),
whereas two cysteines (of which one is essential [15])
are present in the ArsC proteins of gram-negative bacteria. The
putative ArsC protein of T. ferrooxidans contains four
cysteine residues with spacing similar to the spacing in the ArsC
proteins of gram-positive bacteria (data not shown).

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FIG. 2.
Phylogenetic tree based on ArsC proteins. Bootstrap
values (expressed as percentages) based on 100 attempts are indicated
at the branch points. The accession numbers for the protein sequences
are as follows: Y. enterocolitica pYVe227, AAD16858;
E. coli R46, AAB09628; A. multivorum pKW301,
BAA24824; E. coli chromosome, AAC76528; E. coli R773, AAA21096; S. aureus pI258, AAA25638;
Staphylococcus xylosus pSX267, AAA27589; B. subtilis
skin element, BAA06970; P. aeruginosa chromosome,
AAC69644.
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Thioredoxin is required for arsenate reduction by T. ferrooxidans ArsC.
A major difference between the ArsC
proteins of gram-positive bacteria and the ArsC proteins of
gram-negative bacteria is the source of the reducing power used for
reduction of arsenate. It has been shown that reduction of arsenate by
a gram-positive ArsC is coupled to thioredoxin (11) and that
reduction by a gram-negative ArsC is coupled to glutathione
(18). Since ArsC of T. ferrooxidans was clearly
like the ArsC molecules of gram-positive bacteria, thioredoxin and not
glutathione should have been required for arsenate reduction. To
investigate this, E. coli strains with mutations in the
thioredoxin gene (trxA) or both the thioredoxin gene and the
-glutamylcysteinyl synthetase gene (gshA; responsible for
the synthesis of glutathione) were examined to determine their resistance to arsenate. The trxA mutant strain was resistant
to arsenate and was able to grow in the presence of 15 mM sodium arsenate, while the double mutant (trxA gshA) was sensitive
to arsenate and was not able to grow in the presence of 2 mM sodium arsenate. This indicated that the glutathione-requiring E. coli chromosomal ars genes were able to confer
resistance to arsenate in the absence of thioredoxin but not in the
absence of glutathione. When the E. coli double mutant
strain was transformed with the T. ferrooxidans ars genes
(pTfarsCRBH-Cm), a similar result was obtained because neither the
E. coli ars genes nor the T. ferrooxidans ars
genes were functional in the double mutant. However, when a plasmid
containing the thioredoxin gene from T. ferrooxidans, pTrx6,
was added in trans together with the T. ferrooxidans
ars genes to the E. coli double mutant (trxA
gshA), resistance to arsenate was restored. If the double mutant
was transformed with only pTrx6, the cells remained sensitive to
arsenate. This result provided genetic evidence that reduction of
arsenate by ArsC of T. ferrooxidans is coupled to thioredoxin.
Conservation of the unusual ars operon structure in
other T. ferrooxidans strains.
To determine whether
the divergent arrangement of the arsBH and putative
arsR and arsC genes found in T. ferrooxidans ATCC 33020 was unique to this strain, primers BBARSB
and BBARSC (Table 1) were designed within the 5' ends of the
arsB and arsC genes, which allowed amplification
of the 450-bp putative arsR-promoter region (Fig.
3A). If other strains of T. ferrooxidans also have divergent arsBH and putative
arsR and arsC genes, the primers would be
orientated towards each other, and amplification of a 450-bp fragment
would occur. If the genes were not divergently arranged, the primers
would face in the same direction, and no amplification would be
detected. A PCR product of the predicted size was obtained from
chromosomal preparations of T. ferrooxidans ATCC 33020, ATCC
23270, ATCC 19859, and ATCC 13598 but not from chromosomal preparations
of other acidophilic bacteria, such as L. ferrooxidans DSM
2705, Thiobacillus thiooxidans ATCC 19377, and T. caldus MNG, or from E. coli DH5
(Fig. 3B). PCR
experiments performed with primers which amplified the arsH
gene (primers ARSHF and ARSHR [Table 1]) yielded a product of the
predicted size for all of the T. ferrooxidans strains tested
but not for the other bacteria (data not shown). This indicated that
other strains of T. ferrooxidans also possessed the
arsH gene.

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FIG. 3.
(A) Locations of primers used to determine the divergent
arrangement of the putative arsR and arsC genes
and the arsBH genes in different strains of T. ferrooxidans and other biomining bacteria. Primers located within
the arsB and arsC genes were used to amplify the
450-bp region between these two genes. (B) Ethidium bromide-stained
agarose gel of the PCR amplification products, prepared by using
chromosomal DNA from different biomining bacteria. Abbreviations:
T.f., T. ferrooxidans; L.f., L. ferrooxidans; T.t., T. thiooxidans;
T.c., T. caldus; E.c., E. coli. +ve, positive; -ve, negative.
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Expression of T. ferrooxidans ars gene products by
using an E. coli in vitro transcription-translation
system.
Before investigating which of the predicted ORFs described
in Table 2 contributed to arsenic resistance in E. coli, we
examined which polypeptides were expressed in an E. coli in
vitro transcription-translation system. Compared with the vector (Fig.
4, lanes 5 and 10), the pTfars1b clone
yielded additional polypeptides at approximately 45, 41, 35, 27, 25, 18, 14, and 12 kDa (Fig. 4, lane 6). The 18-kDa protein was clearly
identified as ArsC. The size of this protein was consistent with the
size predicted from the sequence (18.2 kDa); this protein was present
only when arsC was included in a test construct and was the
only polypeptide produced by pTfarsC (data not shown). The 27-kDa
protein was identified as ArsH; its size was close to the predicted
size (26.7 kDa), it was synthesized only when an arsH gene
was present, and it was the only polypeptide synthesized by
pTfarsH (Fig. 4B, lane 9). A broad band at about 35 kDa was the
only polypeptide band produced by pTfarsB and was always present when
arsB was present. This protein appeared to be smaller than
the 48.5-kDa protein predicted, but membrane-located proteins often
migrate anomalously (2, 12, 24, 26) and ArsB must have been
synthesized since all of the cells containing arsB
constructs were resistant to arsenite. The 14-kDa band corresponded to
the putative ArsR protein as it was the only additional band (compared to the vector) produced by pTfarsR (Fig. 4, lane 7). Based on the polypeptides produced by pTfars1b and the predicted sizes
of the ORFs, the 41- and 45-kDa polypeptides were products of ORFs 1 and 5, respectively. We presumed that the 25- and 12-kDa proteins
present in pTFars1b but not pTfarsCRBH were synthesized from genes
downstream of ORF 5.

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FIG. 4.
Sodium dodecyl sulfate-polyacrylamide gel
electrophoresis analysis of the proteins expressed from pTfars1a and
subclones by using an E. coli-derived in vitro
transcription-translation system.
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Ability of the cloned T. ferrooxidans ars gene products
to confer increased resistance to arsenic compounds and
antimonite in E. coli AW3110.
Constructs
pTfars1b and pTfarsCRBH conferred equivalent levels of resistance
to arsenite [As(III)] and arsenate [As(V)] in E. coli
AW3110 (data not shown). The abilities of pTfarsCRBH and subclones to
confer resistance to arsenite in E. coli AW3110 were tested
further, as shown in Fig. 5A. A construct
containing only the arsB gene (pTfarsB) conferred levels of
resistance to arsenite similar to the levels of resistance conferred by
pTfarsCRBH or pTfarsCRB. This experiment was repeated four times, and
although the results of the experiments varied, we obtained no clear
evidence that arsenite resistance in E. coli was improved by
the presence of arsC or arsH. Therefore, only
arsB was required for resistance to arsenite in E. coli. The cloned T. ferrooxidans arsB gene was also
required to enhance the resistance of E. coli to antimony, and this resistance was not enhanced further by the presence of arsC or arsH (data not shown). As expected, the
arsC and arsB genes were essential for increased
resistance of E. coli to arsenate, and this resistance was
not increased by the presence of arsH (Fig. 5B).

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FIG. 5.
Growth of E. coli AW3110 containing pSK,
pTfarsCRBH, pTfarsCRB, pTfarsBH, and pTfarsB in the presence of
arsenite (A) and arsenate (B). Each data point represents the results
of three assays of three independent experiments. The error bars
indicate standard deviations. OD 600 nm, optical density at 600 nm.
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DISCUSSION |
During biooxidation of arsenopyrite ores and concentrates large
quantities of arsenic are released into the surrounding solution. Since
T. ferrooxidans is a member of the consortium of bacteria involved in arsenopyrite biooxidation, we expected that T. ferrooxidans would possess arsenic resistance genes. However, the
unusual arrangement of the T. ferrooxidans ars operon was
not expected. No arsD gene or arsA-like gene
(ATPase subunit) was found in the immediate vicinity of the arsenic
resistance genes, and only arsC, arsB, and
arsH-like genes were identified based on initial sequence comparisons. More careful analysis resulted in identification of a
putative regulator between the arsB and arsC
genes. However, the predicted protein exhibited only relatively weak
homology to the ArsR proteins produced by previously described
ars operons. This protein also lacked the conserved
metal-binding box to which the arsenite inducer binds, which causes a
conformational change in the helix-turn-helix domain and results in
dissociation of the repressor from the DNA (29). Recently,
the regulator of the chromosomal zinc resistance operon of
Staphylococcus aureus, ZntR, which appears to belong to the
ArsR family of transcriptional regulators, was also found to lack the
metal-binding motif (33). The binding reaction of the ZntR
protein and the znt promoter was, however, still inhibited
by the presence of 25 µM Zn2+ or Co2+. There
is, therefore, some indication that there may be other unknown
interactions involved in induction of the operon. The orientation of
the putative arsR and arsC genes and the
arsBH genes indicated that the genes must be divergently
transcribed in a manner that has not been observed before. Furthermore,
the divergent gene arrangement was conserved in T. ferrooxidans strains that originated from Canada, the United
States, and Japan but was not found in L. ferrooxidans,
T. thiooxidans, or T. caldus. In such a divergent
arrangement, it is possible that transcription of arsC and
transcription of arsB are regulated separately. It has been
suggested that TCAT-N7-TTTG may represent a consensus binding site for
the E. coli chromosomal ArsR and R773 ArsR repressors (36), but no corresponding sequences were detected in the
region between the T. ferrooxidans arsC and arsB
genes (data not shown). Work is in progress to investigate regulation
of the T. ferrooxidans ars operon. In addition to Northern
blotting and transcript mapping, this work will involve construction of
arsR-, arsC-, and arsB-lacZ promoter-fusion reporter genes, a ptac-arsR IPTG
(isopropyl-
-D-thiogalactopyranoside)-controlled expression construct, and an E. coli lac-
ars mutant
strain. This study should reveal how the divergent operon is regulated
and whether the activity of the putative ArsR protein of T. ferrooxidans is affected by arsenic.
An ORF with homology to the arsH gene was located
immediately downstream of the arsB gene. The arsH
gene was first identified in Y. enterocolitica, in which it
is divergently transcribed from the arsRBC genes
(17). Although it has been reported that the arsH
gene is necessary for arsenic resistance, the function of the gene is
unknown, and Neyt et al. (17) hypothesized that it might act
as some type of regulator. When BLAST, Prosite
(http://www.expasy.ch/prosite), and pfam (http://pfam.wustl.edu/pfam)
were used, ArsH proteins exhibited no clearly discernable overall or
motif similarity to other proteins. The finding that the T. ferrooxidans arsH-like gene was expressed in an E. coli
in vitro transcription-translation system but was not required for
resistance to arsenite, arsenate, or antimony in E. coli is
in apparent contrast to data obtained for the arsenic resistance genes
present on the Y. enterocolitica pYV virulence plasmid.
However, the effect of pYV arsH was studied in Y. enterocolitica, while the effect of the T. ferrooxidans arsH was studied in a heterologous E. coli host. It is
possible that arsH has an effect on arsenic resistance in
T. ferrooxidans that is not observed when arsH is
cloned in E. coli. The presence of an arsH-like
gene appears to be a feature of T. ferrooxidans, as such a
gene was detected in all four strains examined. Whether ArsH plays a
role in ars regulation will be examined in another study.
As an obligately chemolithotrophic acidophilic bacterium, T. ferrooxidans comes from an environment which could be predicted to
be genetically more isolated than the environments of most other
bacteria in which ars genes have been studied. Therefore, it
was interesting to compare the predicted amino acid sequences of the
T. ferrooxidans ArsB and ArsC proteins with the amino acid sequences of proteins of other bacteria. T. ferrooxidans
ArsB clearly grouped with the ArsB proteins of other gram-negative bacteria. The predicted amino acid sequence of T. ferrooxidans ArsC was most closely related to the amino acid
sequence of ArsC of P. aeruginosa. However, unlike P. aeruginosa ArsC, which did not reduce arsenate when
arsC was cloned in E. coli (3), cloned arsC of T. ferrooxidans was expressed and
functional in the heterologous host. In contrast to the ArsB proteins,
the ArsC proteins of T. ferrooxidans and P. aeruginosa were more similar to ArsC proteins of gram-positive
bacteria. Genetic evidence that ArsC of T. ferrooxidans is
biochemically like the thioredoxin-requiring gram-positive type of ArsC
proteins supports this grouping. Therefore, it is clear that there are
at least two groups of ArsC proteins, a four-conserved-cysteine thioredoxin-requiring ArsC group and a two-conserved-cysteine glutathione-requiring ArsC group (31). Since T. ferrooxidans is the second gram-negative bacterium found to have a
four-conserved-cysteine thioredoxin-requiring ArsC, correlation of this
type of ArsC with gram-positive bacteria, which appeared to be valid
based on the initial data for several of the arsenic resistance genes
examined, appears to be an oversimplification.
Like other workers, we found that the ArsB protein is difficult to
detect unequivocally in an E. coli in vitro system
(34). Nevertheless, the arsB and arsC
genes of T. ferrooxidans were clearly expressed and
functional in E. coli. As found with other ars
operons, the T. ferrooxidans arsB gene on its own was able to confer resistance to arsenite and antimony, but arsC was
required in addition to arsB for arsenate resistance (Fig.
5). The ability of the T. ferrooxidans ars system to
function in E. coli is noteworthy when how arsenic
resistance systems may be energized is considered. It is thought that
in arsenic resistance systems which lack the ArsA (ATPase) membrane
potential rather than ATP, hydrolysis is the energy source (9, 12,
35). The obligately acidophilic organism T. ferrooxidans has an internal pH of about 6.5, and when cells are
growing on Fe2+ at pH 2.0, they maintain a
pH of 4.5 U
(7). Unlike other bacteria, acidophilic bacteria with a
large
pH have a positive inside membrane potential rather than a
negative inside membrane potential, which subtracts from the
H+ gradient instead of augmenting it (16).
Nevertheless, in spite of the fact that it originated from a bacterium
that has a positive inside membrane potential, the T. ferrooxidans ArsB arsenite efflux pump membrane was functional in
E. coli.
This initial investigation of the T. ferrooxidans arsenic
resistance system was performed with E. coli. In future work
we will have to include studies of arsenic resistance and gene
expression in T. ferrooxidans, which, because of the
rudimentary genetic system available, the lack of mutants, and the
difficulty of readily obtaining large quantities of cells, will present
a considerable challenge.
 |
ACKNOWLEDGMENTS |
We thank Barry Rosen for providing E. coli W3110 and
AW3110 and much useful advice, especially advice concerning
low-phosphate media. We also thank Simon Silver for his interest and advice.
This work was supported by grants from the National Research Foundation
(Pretoria, South Africa) and Billton Process Research Laboratories
(Randburg, South Africa).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Microbiology, University of Stellenbosch, Private Bag X1, Matieland, South Africa 7602. Phone: 27 21 808 4866. Fax: 27 21 808 3611. E-mail:
der{at}land.sun.ac.za.
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Applied and Environmental Microbiology, May 2000, p. 1826-1833, Vol. 66, No. 5
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