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Applied and Environmental Microbiology, August 2000, p. 3151-3159, Vol. 66, No. 8
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Engineering of the Pyruvate Dehydrogenase Bypass in
Saccharomyces cerevisiae: Role of the Cytosolic
Mg2+ and Mitochondrial K+ Acetaldehyde
Dehydrogenases Ald6p and Ald4p in Acetate Formation during
Alcoholic Fermentation
Fabienne
Remize,
Emilie
Andrieu, and
Sylvie
Dequin*
Laboratoire de Microbiologie et Technologie
des Fermentations, INRA-IPV, F-34060 Montpellier Cedex 2, France
Received 1 February 2000/Accepted 13 May 2000
 |
ABSTRACT |
Acetic acid plays a crucial role in the organoleptic balance of
many fermented products. We have investigated the factors controlling
the production of acetate by Saccharomyces cerevisiae during alcoholic fermentation by metabolic engineering of the enzymatic
steps involved in its formation and its utilization. The impact of
reduced pyruvate decarboxylase (PDC), limited acetaldehyde dehydrogenase (ACDH), or increased acetoacetyl coenzyme A synthetase (ACS) levels in a strain derived from a wine yeast strain was studied
during alcoholic fermentation. In the strain with the PDC1
gene deleted exhibiting 25% of the PDC activity of the wild type, no
significant differences were observed in the acetate yield or in the
amounts of secondary metabolites formed. A strain overexpressing
ACS2 and displaying a four- to sevenfold increase in ACS
activity did not produce reduced acetate levels. In contrast, strains
with one or two disrupted copies of ALD6, encoding the cytosolic Mg2+-activated NADP-dependent ACDH and exhibiting
60 and 30% of wild-type ACDH activity, showed a substantial decrease
in acetate yield (the acetate production was 75 and 40% of wild-type
production, respectively). This decrease was associated with a
rerouting of carbon flux towards the formation of glycerol,
succinate, and butanediol. The deletion of ALD4,
encoding the mitochondrial K+-activated NAD(P)-linked ACDH,
had no effect on the amount of acetate formed. In contrast, a strain
lacking both Ald6p and Ald4p exhibited a long delay in growth and
acetate production, suggesting that Ald4p can partially replace the
Ald6p isoform. Moreover, the ald6 ald4 double mutant was
still able to ferment large amounts of sugar and to produce acetate,
suggesting the contribution of another member(s) of the ALD family.
 |
INTRODUCTION |
Acetate, a by-product of yeast
alcoholic fermentation, plays a significant role in the organoleptic
balance of many fermented products as the main component of volatile
acidity. In beer, the level of acetic acid is usually around 57 to 145 mg/liter and must remain below the taste threshold of 0.4 g/liter
(14). In wine, acetic acid is highly undesirable above 0.8 g/liter (8). However, higher levels are sometimes produced,
depending on the strain, on must composition, and on the winemaking
process, substantially affecting wine quality. Strains with reduced
acetate production would therefore be of high value in enology. In
addition, the reduction of acetate production is also of great interest
for adjusting the by-product formation of yeast strains overproducing glycerol. We have previously constructed wine yeast strains
overproducing glycerol that could be of great value in enology to
improve the quality of wines lacking body (24, 34). The only
critical side effect of glycerol overproduction was the high level of
acetate formed (34).
The aim of this study was to better understand how the amount of
acetate produced by yeast is controlled during fermentative metabolism.
During alcoholic fermentation, acetate is formed by Saccharomyces
cerevisiae via the cytosolic pyruvate dehydrogenase (PDH) bypass,
which is an alternative route to the PDH reaction for the conversion of
pyruvate to acetyl-coenzyme A (CoA). This so-called PDH bypass involves
the enzymes pyruvate decarboxylase (PDC; EC 4.1.1.1), acetaldehyde
dehydrogenase (ACDH; EC 1.2.1.5 and EC 1.2.1.4), and acetyl-CoA
synthetase (ACS; EC 6.2.1.1) (Fig. 1).
Acetyl-CoA can be formed in the mitochondria by oxidative decarboxylation of pyruvate catalyzed by the PDH complex. However, due
to the inability of S. cerevisiae to transport acetyl-CoA out of the mitochondria, the PDH bypass has an essential role in
providing acetyl-CoA in the cytosolic compartment (9, 32, 44). Acetyl-CoA is further processed in the cytosol, in
particular for lipid synthesis. In addition to being a substrate for
acetyl-CoA synthetase, a physiological role of acetate formation may be
the regeneration of reducing equivalents (NADH and NADPH)
for maintaining the redox balance.
Pyruvate decarboxylase catalyzes the thiamine PPi-
and Mg2+-dependent decarboxylation of pyruvate to
acetaldehyde and carbon dioxide. Three structural genes,
PDC1, PDC5 (40), and PDC6
(12), potentially encode this enzyme. The role of
PDC6 remains unclear. During growth on glucose, 90% of the
PDC activity is due to Pdc1p in wild-type cells (11, 12). On
the other hand, PDC5 expression is strongly enhanced in a
mutant with PDC1 deleted (11, 38, 40). The full
expression of PDC1 and PDC5 requires the presence of a functional PDC2 gene, which encodes a positive
transcriptional regulator (13).
ACDH, the second enzyme of the PDH bypass, oxidizes acetaldehyde to
acetic acid. Two enzymes located in different compartments have been
isolated from S. cerevisiae. A mitochondrial enzyme, activated by K+ and thiols, that can use both
NAD+ and NADP+ (15) and a
cytosolic enzyme that is Mg2+ activated and specific
for NADP+ (6, 41) were reported. It has been
proposed that the cytosolic enzyme is responsible for the formation of
acetate on glucose and that the mitochondrial enzyme plays a major role
during growth on ethanol (22, 36). These enzymes belong to
the family of S. cerevisiae aldehyde dehydrogenases (ALDH),
which contains five members (S. cerevisiae Genome Database
[http://genome-www.stanford.edu/Saccharomyces/]). The nomenclature used to designate these genes in the last few years
has been very confused and has only very recently been clarified (28). ALD2 (YMR170c), ALD3
(YMR169c), and ALD6 (YPL061w) correspond to the
cytosolic isoforms, while ALD4 (YOR374w) and
ALD5 (YER073w) encode the mitochondrial enzyme. The
two tandem-repeat genes ALD2 and ALD3 have been
characterized as the cytosolic stress-inducible aldehyde dehydrogenases
using NAD as a cofactor, and they are glucose repressed (27, 28,
30). The main cytosolic Mg2+-activated ACDH isoform
is encoded by ALD6 and preferentially uses NADP
(23). This isoform plays a role both on ethanol (deletion of
this gene led to the inability to use ethanol as a carbon source) and
on glucose. Since the deletion mutant was viable on glucose, it was
suggested that the enzyme encoded by ALD6 was not solely responsible for the production of cytosolic acetyl-CoA (23). ALD5 (YER073w) was shown to encode a minor form of the
mitochondrial NAD(P) ACDH (49), which might play a role in
regulation or biosynthesis of electron transport chain components
(19). Recently, the gene ALD4 (YOR374w) was shown
to encode the mitochondrial K+-activated acetaldehyde
dehydrogenase that is active during growth on ethanol (named
ALD7) (21, 42). Based on the observation that the
ability of a mutant with ALD4 deleted to grow on glucose was
not affected while its growth on ethanol was severely impaired, it was
concluded that only Ald6p plays a role during growth on glucose
(42). In contrast, it was recently reported that a strain in
which ALD6 (denoted ALD1) and ALD4
(denoted ALD2) had been disrupted failed to grow on glucose
alone unless acetate was added (49). In all these studies,
the contribution of each isoform to acetate production under
fermentative metabolism has never been examined.
The formation of acetyl-CoA from acetate is catalyzed by ACS and
involves hydrolysis of ATP. It has been suggested that when respiring
cells are exposed to excess glucose, acetate production might be due to
a limited in vivo activity of ACS (46). Two structural genes
encoding ACS, ACS1 and ACS2, have been described. ACS1 is subject to glucose repression (17, 44),
and its product is therefore only present during respiratory and
respirofermentative growth (5). In contrast, ACS2
is constitutively expressed (44). A mutant with
ACS2 disrupted can no longer grow on glucose, since the
cytosolic compartment cannot be supplied with acetyl-CoA
(43).
The aim of this study was to investigate how acetate excretion can be
reduced during alcoholic fermentation. We have examined the roles of
PDC, ACS, and the major cytosolic and mitochondrial forms of ACDH in
controlling acetate production by constructing strains with reduced or
increased levels of the corresponding activity. The consequences for
acetate and end-product formation, growth, and the fermentation rate
were investigated during fermentation under enological conditions.
 |
MATERIALS AND METHODS |
Yeast and bacterial strains.
Escherichia coli
DH5
was used for cloning experiments. E. coli cultivation
and media were as described previously (37). The strain V5
(MATa ura3) derived from the Champagne strain was previously described (24). Under enological conditions, this strain exhibits fermentation performance close to that of industrial strains and superior to that of laboratory strains. Yeast
strains were maintained and grown on YPD medium (1% Bacto Yeast
Extract, 2% Bacto Peptone, and 2% glucose), or on minimal medium SD
(2% glucose, 0.67% yeast nitrogen base without amino acids) with
uracil (20 mg/liter).
Fermentation media and conditions.
Batch fermentation
experiments were carried out under conditions previously defined to
simulate enological fermentation (1). The synthetic medium
MS simulating a standard grape juice containing 20% glucose was as
described previously (1) but without proline. The total
nitrogen amount was 300 mg/liter (80 mg of ammoniacal nitrogen/liter).
Cells were precultured on MS medium at 28°C in 50-ml flasks without
agitation for 36 h. Fermentation was performed by inoculation of
the precultured cells at a density of 106 per ml in
fermentors with a working volume of 200 ml or 1.1 liters equipped with
fermentation locks and was carried out at 28°C with continuous
stirring (500 rpm). CO2 release was determined by automatic measurement of fermentor weight loss every 20 min (35). A
linear correlation has been established between ethanol and sugar
concentrations and the volume of CO2 released
(7).
DNA manipulation, cloning techniques, and transformation
methods.
Restriction and modification enzymes were used according
to the manufacturer's instructions. E. coli plasmid DNA was
prepared using standard protocols (37). Purified
oligonucleotides were synthesized by Eurogentec. E. coli
transformation was carried out by the
CaCl2-RbCl2 method (10).
Transformation of S. cerevisiae was performed using the
lithium acetate procedure (39).
PDC1 deletion.
To delete PDC1, the
PCR-based gene disruption method previously described (48)
was used. A PCR fragment was amplified from pFA6-kanMX4. The forward
primer PDC1-F1
(5'-TATCTTCTACTCATAACCTCACGCAAAATAACACAGTCAACGTACGCTGCAGGTCGAC-3') has 18-nucleotide homology with the pFA6-kanMX4 multiple cloning sites (MCS) and a 40-nucleotide extension (underlined sequence) corresponding to the region
50 to
11 upstream of the start codon of
the PDC1 open reading frame (ORF). The reverse primer
PDC1-R1 (5'-ATGCTTATAAAACTTTAACTAATAATTAGAGATTAAATCGATCGATGAATTCGAGCTCG-3') has 20-nucleotide homology with the pFA6-kanMX4 MCS and 39 nucleotides (underlined sequence) corresponding to the region
immediately downstream of the stop codon of the PDC1 ORF.
The replacement of the PDC1 ORF by the amplified module was
verified by PCR analysis of total DNA isolated from Kanr
transformants, using as the forward primer PDC1a
(5'-CTCTCCTTGGAATCAGA-3'), corresponding to the region
126
to
109 upstream of the start codon of the PDC1 ORF, and as
the reverse primer PDC1b (5'-GGTAAGTGACAGTGCAG-3'), corresponding to the region +74 to +95 downstream of the stop codon of the PDC1 ORF. The deletion was confirmed by
Southern blot analysis using KpnI-digested DNA and a
pFA6-kanMX4 or KpnI internal fragment as probes.
ACS2 overexpression.
The ACS2 gene
was PCR amplified from total DNA isolated from the V5 strain, using as
the forward primer
5'-CCGCGGCCGCGGTTAGTGATTGTTATAC-3' and as the reverse primer
5'-CCGCGGCCGCTTTCCTAGCTGACCAG-3', in
which NotI sites (in italics) were introduced. The
underlined sequences correspond to the region
64 to
43 upstream of
the start codon of the ACS2 gene and to the region +133 to
+151 downstream of the stop codon of the ACS2 ORF. The PCR
fragment was digested by NotI and cloned into the
NotI site of the pFL60 plasmid (26) to give the
pFL-ACS2 vector.
Deletion of ALD6 and ALD4.
The genes
ALD6 and ALD4 were deleted by the PCR-based gene
disruption method (48). To delete ALD6 in the
strain V5, two primers were used to amplify a PCR fragment from
pFA6-kanMX4 corresponding to the Kanr module and to
nucleotide extensions to direct the integration in the ALD6
gene. The forward primer ALD6KanF
(5'-AAACATCAAGAAACATCTTTAACATACACAAACACATCGTACGCTGCAGGTCGAC-3') has 18-nucleotide homology with the pFA6-kanMX4 MCS and a
37-nucleotide extension (underlined sequence) corresponding to the
region
51 to
15 upstream of the start codon of the ALD6
ORF. The reverse primer, ALD6Kanr
(5'-TTTGTGTATATGACGGAAAGAAATGCAGGTTGGTACATTAATCGATGAATTCGAGCTCG-3'), has 19-nucleotide homology with the pFA6-kanMX4 MCS and 40 nucleotides (underlined sequence) corresponding to the region
immediately downstream of the stop codon of the ALD6 ORF
(+1501 to +1540).
The deletion was verified by PCR analysis of total DNA isolated from
Kan
r transformants, using as the forward primer ALD6V1
(5'-GGGCGCGCCGCGGA-3'),
corresponding to the region

421 to

408 upstream of the start
codon of the
ALD6 ORF, and as
the reverse primer ALD6V2 (5'-GCAGTAAGACCAAGTAAGT-3'),
corresponding to the region +1555 to +1573. The disrupted
phenotype
was confirmed by Southern blot analysis of genomic DNA and
of
chromosome blots. Total DNA was digested by
NsiI and
hybridized
with a probe corresponding to a
ClaI-digested PCR fragment generated
using primers ALD6V1
and ALD6V2. A
HindIII-
ClaI internal
ALD6 fragment obtained by digestion of the PCR product was
used for
hybridization on chromosome
blots.
The gene
ALD4 was inactivated in the strains V5 and V5
ald6 using a similar strategy but with the
URA3
gene as a marker. The
forward primer,
5'-
ATGTT CAGTAGATCTACGCTCTGCTTAAAGACGTCTGCATCCGGAGATGAT
CAGATCTGGC-3',
has 19-nucleotide homology with the
URA3 gene of
the
plasmid pVT100-U (
47) and a 42-nucleotide extension
(underlined
sequence) corresponding to the region +1 to +42 downstream
of
the start codon of the
ALD4 ORF. The reverse primer,
5'-
CACCAGGCTTATTGATGACCTTACTCGTCCAATTTGGCACCGTCATTATAAAAATCATTACGAC-3',
has 24-nucleotide homology with the
URA3 gene of
pVT100-U and
a 40-base extension corresponding to the region +1542 to
+1580
of
ALD4.
The strains V5 and V5
ald6 were transformed by the PCR
products. The correctness of the deletion was checked by PCR analysis
using the primers ALD4V1 (5'-GCGGGACTTCCGTCCA-3') and ALD4V2
(5'-CATCAAGGTCTCTGATGC-3'),
corresponding to the regions

247 to

233 and +1867 to +1883 of
ALD4, respectively. The
deletion was confirmed by Southern blot
analysis of genomic DNA and of
chromosome blots. Total DNA was
digested by
ScaI and
hybridized with a PCR
ALD4 fragment generated
using the
primers ALD4V1 and ALD4V2. An
XhoI-
NsiI internal
ALD4 fragment obtained by digestion of the PCR product was
used for
hybridization on chromosome
blots.
ALD6 overexpression.
The ALD6 gene
was PCR amplified from total DNA isolated from the strain V5, using as
the forward primer 5'-AAGGATCCATGACTAAGCTACACTTTG-3' and as the reverse primer
5'-AAGGATCCTTACAACTTAATTCTGACA-3', with homology
with the regions immediately downstream of the start codon and
surrounding the stop codon, respectively. BamHI sites (in
italics) were introduced. The 15-kb PCR fragment was digested by
BamHI and cloned into the BamHI site of the
pVT100-U plasmid (47) to give the pVT-ALD6 vector.
Analytical methods.
Yeast cells were counted using an
electronic particle counter (ZM; Coultronics). Acetic, pyruvic, and
succinic acids, glycerol, and ethanol were analyzed by high-pressure
liquid chromatography and by enzymatic assays (Boehringer detection
kit), 2,3-butanediol was analyzed by gas chromatography, and
acetaldehyde was analyzed by the enzymatic method as previously
described (24). Reducing sugar was measured by a
colorimetric method using 3.5-dinitrosalicylic acid as previously
described (25).
Cell extracts and enzyme assays.
Samples of cultures were
harvested at 2,000 × g and washed twice in 10 mM
phosphate buffer (pH 7.5). The cells were suspended in 100 mM phosphate
buffer containing 2 mM MgCl2 and 1 mM dithiothreitol and
broken using 0.5-mm glass beads. Debris was removed by centrifugation at 15,000 × g. The supernatant was used as a cell
extract. Enzyme activities were assayed immediately after the
preparation of cell extracts. The protein concentration was determined
by the Bradford method (3) using bovine serum albumin as the standard.
The PDC and ACS activities were determined as previously described
(
9,
31). The ACS activity was assayed fluorometrically
at
excitation and emission wavelengths of 340 and 460 nm, respectively.
The solutions of the Boehringer acetate kit were used. The reaction
mixture consisted of solution 1 (600 µl), solution 2 (2.4 µl),
solution 3 (malate dehydrogenase and citrate synthetase; 4.2 µl),
and
120 µl of a solution containing 3.35 mM CoA and 41.3 mM ATP
in a
final volume of 2 ml. The reaction was started with 10 mM
potassium
acetate. The ACDH activity was determined as previously
described
(
31) except that MgCl
2 (10 mM) was used instead
of
KCl.
 |
RESULTS |
Impact of reduced pyruvate decarboxylase activity.
The strain
V5 was transformed with the PCR product obtained by amplification of
the KanMX module of the plasmid pFA6-kanMX4 with the primers
PDC1-F1 and PDC1-R1. Total DNA isolated from three Kanr
transformants was subjected to PCR analysis using two primers, PDC1a and PDC1b. A 1.5-kb fragment was detected in all three
transformants (instead of the 1.9-kb fragment in the wild-type strain),
which was consistent with the deletion of PDC1 as
predicted from the yeast genome sequence. This was further confirmed by
Southern blot analysis.
Figure
2 presents the growth on synthetic
medium MS simulating the composition of a grape must, the specific PDC
activity,
and the fermentation rate of V5
pdc1 with respect
to the wild-type
strain. The growth of the mutant was unaffected (Fig.
2A), while
a slight decrease in the CO
2 production rate
(Fig.
2C) was observed
during the growth phase for the deletion mutant,
resulting in
an increased fermentation time. The pyruvate decarboxylase
activity,
measured in cell extracts over different time points of the
fermentation,
was reduced about fourfold in the mutant strain V5
pdc1 compared
to that in the parental strain, V5 (Fig.
2B).

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FIG. 2.
Consequences of PDC1 deletion for growth (A),
PDC activity (B), and fermentation rate (C). Fermentations were
performed in 1-liter fermentors filled with MS medium as described in
Materials and Methods. , V5; , V5 pdc1. The experiment
was repeated three times with similar results. dCO2/dT,
CO2 production rate.
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|
To determine the consequences of a reduced PDC activity for metabolic
flux, the concentrations of pyruvate, acetaldehyde,
ethanol, acetate,
and glycerol produced by the deletion and the
wild-type strains were
compared. Although the pyruvate production
of the
pdc1
strain was 2.4 times greater than that of the wild-type
strain, no
significant difference in the amounts of other metabolites
between the
two strains was observed (Table
1).
Since acetaldehyde
production varies greatly during fermentation,
increasing during
the growth phase and subsequently decreasing during
the stationary
phase, its concentration was monitored throughout the
fermentation,
but again no difference was detected between the mutant
and the
control strains. Finally, no significant difference was found
between the amounts of ethanol formed by V5 and V5
pdc1
(data
not shown).
Impact of overexpression of ACS2.
To investigate
whether acetate excretion can be reduced by overproduction of ACS, we
introduced the gene ACS2 on the multicopy plasmid pFL61
under the control of the PGK1 promoter. The transformed strains formed small colonies on SD medium (minimal medium containing 2% glucose) and exhibited very slow growth on this medium (data not
shown). The growth defect was partially alleviated during growth on MS
medium, but the final population was significantly reduced (Fig.
3A). The acetyl-CoA synthetase activity,
measured at different times during fermentation (Table
2), was four- to sevenfold greater in the
strain overexpressing ACS2 than in the control strain.
During growth on MS medium, V5/pFLACS2 exhibited delayed
fermentation activity but was able to complete the degradation of
sugars (Fig. 3B). Despite this delay, the CO2 production
rate remained higher than that of the control strain during the
stationary phase, resulting in a reduction of the fermentation time.
Overproduction of Acs2p had no significant effect on acetate
production during fermentation. The final concentrations of acetate,
acetaldehyde, glycerol, and pyruvate were similar in strain
V5/pFLACS2 and the wild-type strain (Table
3).

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FIG. 3.
Consequences of ACS2 overexpression for
growth (A) and fermentation rate (B) on MS medium. , V5/pFL61
(control); , V5/pFLACS2. Fermentation conditions were as
described in the legend to Fig. 2. The experiment was repeated three
times with similar results. dCO2/dt, CO2
production rate.
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|
Impact of limited acetaldehyde dehydrogenase.
To limit
acetaldehyde dehydrogenase, we deleted ALD6, the structural
gene coding for a cytosolic, Mg2+-activated acetaldehyde
dehydrogenase (23). PCR analysis of the total DNA of three
Kanr transformants strongly suggested that two copies of
ALD6 were present in the wild-type strain, V5. In two of the
three transformants, one ALD6 copy was replaced by the
KanMX4 module, while the two ALD6 copies were deleted in the
third transformant (data not shown). This was further confirmed by
Southern blot analysis of total DNA digested by NsiI. The
detection of two NsiI fragments of 1.9 and 1.1 kb in two
transformants was consistent with the existence of both an intact and a
deleted ALD6 copy in these strains (Fig. 4, lane 2). In contrast, the two
ALD6 copies were disrupted in a third transformant, as
indicated by the detection of only the 1.1-kb NsiI fragment
(Fig. 4, lane 3).

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FIG. 4.
Southern blot analysis of mutants with one or two
ALD6 genes deleted. (A) Restriction map of the
ALD6 region and of the KanMX4 fragment used for disruption
and position of the fragment used as a probe. (B) Total DNA from the
wild-type strain, V5 (lane 1), V5 ALD6 ald6 (lane 2), and V5
ald6 (lane 3) was digested by NsiI and hybridized
with the probe covering the ALD6 coding region plus the 5'
flanking region.
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The effects of the disruption of
ALD6 were investigated in
cell extracts of cultures during fermentation on the synthetic
medium
MS simulating the composition of a grape must. As shown
in Fig.
5B, the
single- and double-disrupted mutants displayed
reductions in
NADP-dependent ACDH activity of about 30 and 60%,
respectively,
compared to the control strain. The mutants displayed
growth similar to
that of the wild-type strain (Fig.
5A).
The
fermentation rate was unaffected for the single-disrupted mutant
and slightly modified for the strain with the two
ALD6 genes
deleted
(Fig.
5C). As shown in Fig.
5D, the limitation of the cytosolic
ALDH encoded by
ALD6 results in a marked decrease in acetate
production
compared to the wild-type strain. The residual acetate
amount
produced by the strains in which one or two copies of
ALD6 had
been deleted represented 75 and 40% of the
production of the wild-type
strain, respectively. The reduction in the
amount of acetate was
therefore proportional to the decrease in
NADP-dependent acetaldehyde
activity, indicating that this enzyme is
limiting for acetate
production. Moreover, the strain devoid of Ald6p
was still able
to produce acetate, suggesting the contribution of other
ALD genes.
A transient increase in acetaldehyde concentration,
particularly
marked for the double-disrupted strain, was observed
during fermentation
(Fig.
5E). However, the final concentration was not
significantly
different from that of the V5 strain.

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FIG. 5.
Consequences of ALD6 disruption for growth
(A), NADP-dependent ACDH activity (B), fermentation rate (C), acetate
(D), and acetaldehyde (E) production. Fermentation conditions were as
described in the legend to Fig. 2. The specific NADP-dependent
acetaldehyde dehydrogenase activity was determined on crude extracts
immediately after they had been prepared, as described in Materials and
Methods. , V5; , V5 with one ALD6 copy deleted (V5
ALD6 ald6); , V5 with the two ALD6 copies
deleted (V5 ald6). dCO2/dt, CO2
production rate.
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To confirm that the level of Ald6p controls acetate production,
ALD6 was cloned on the multicopy pVT100-U vector under the
control of the
ADHI promoter and terminator. This vector was
introduced
into the V5 strain to give the strain
V5-
ALD6, which was further
tested for acetate production
during alcoholic fermentation. As
expected, the amount of acetate
produced after fermentation on
MS medium was higher for the recombinant
strain (1.5 g/liter)
than for the control strain (0.85 g/liter).
To identify other genes responsible for the acetate formed by a strain
in which the two
ALD6 gene copies have been deleted,
we
disrupted the gene
ALD4, encoding the mitochondrial
K
+-activated ACDH, in the wild-type and
ald6
strains. The verification
of the disruption by PCR and Southern
blotting revealed, as observed
for
ALD6, the presence of two
ALD4 copies. Ura
+ transformants with one
ALD4 copy or both copies deleted were
obtained for the two
strains V5 and V5
ald6, as demonstrated by
PCR and Southern
blot analysis (data not shown). While a V5 strain
lacking the
ALD4 gene(s) exhibited normal growth and produced
the same
amount of acetate as the wild type, the growth and acetate
production
of the strain lacking both Ald6p and Ald4p were markedly
affected
compared to those of the wild-type and the
ald6 strains
(Fig.
6). The
ald6 ald4 mutant
was still able to form acetate.
Low levels were detected during half of
the fermentation, and
then the production increased to reach a
concentration slightly
below that of the
ald6 strain (Fig.
6B). The
ald6 ald4 mutant
was also able to complete the
fermentation on a rich sugar medium,
although sugar exhaustion was
achieved 40 h later than for the
other strains (data not shown).
It was recently reported (
49)
that a mutant devoid of Ald6p
and Ald4p was unable to grow on
glucose. The possibility that the
increased acetate production
around midfermentation was due to a
recombination between an inactivated
ALD allele(s) and other
putative
ALD genes was ruled out by PCR
analysis of cells
taken at the end of the fermentation (data not
shown). Another
possibility might be the selection in the growth
medium of cells
bearing additional genomic mutations. To examine
this hypothesis, cells
collected at the end of fermentation were
plated on
yeast-peptone-dextrose (YPD) medium and submitted to
a second
fermentation experiment. The growth and acetate production
patterns
were identical to those of the initial
ald6 ald4 mutant
(data not shown), excluding the possibility of additional mutation.
To
investigate if the specific growth conditions used in this
study (a
sugar-rich medium) could explain the differences in the
phenotype of
the mutant, the
ald6 ald4 mutant was grown on SD
medium plus
uracil (Fig.
7). The mutant was able to
grow, although
to a lesser extent than the wild type or the
ald6 and
ald4 mutants.
Similarly, the double
mutant was able to form colonies on the
same medium smaller than those
of the other three strains.

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FIG. 6.
Comparison of growth (A) and acetate production (B) of a
mutant lacking Ald6p, Ald4p, or both Ald6p and Ald4p. , V5; , V5
ald6; , V5 ald4; , V5 ald6 ald4.
Fermentation conditions were as described in the legend to Fig. 2.
Complete sugar exhaustion was achieved after 110 h of fermentation
for all strains except the ald6 ald4 strain, which finished
fermentation at 140 h. The experiment is representative of three
independent experiments. OD, optical density.
|
|

View larger version (78K):
[in this window]
[in a new window]
|
FIG. 7.
Growth of ald6, ald4, and
ald6 ald4 mutants on SD medium plus uracil after 4 days at
28°C. The cells were pregrown in YPD medium. Equal amounts of cells
from a dilution series in 1:10 steps were spotted onto SD medium plus
uracil.
|
|
As shown in Table
4, reduction of acetate
formation by the mutants V5
ald6 and V5
ald6 ald4
led to marked shifts in the yields
of fermentation end products. The
concentration of acetaldehyde
was increased, and that of pyruvate was
proportionally decreased.
A marked increase in the concentrations of
glycerol and 2,3-butanediol
was also observed in the two mutants, while
that of succinate
was only slightly enhanced in the
ald6
ald4 mutant. Although a
decrease in acetate formation was
expected to trigger large changes
in metabolite formation to
counterbalance the deficit in reduced
cofactors, the increase in
glycerol production is unexpected in
the context of NAD(P)H
shortage.
 |
DISCUSSION |
Although acetic acid plays an important role as (off) flavor in
many fermented products, little is known about the factors involved in
controlling its production by S. cerevisiae. Since pyruvate
decarboxylase catalyzes the first step of the ethanol-specific pathway,
strong reduction of PDC activity was expected to restrict alcoholic
fermentation and acetate production. Due to its important role as a
pivotal enzyme in NADH reoxidation, this might have resulted in the
adjustment of the redox balance to supply oxidized cofactors (i.e., by
increasing glycerol or decreasing acetate production). In this work we
report that a pdc1 mutant exhibiting a markedly decreased
pyruvate decarboxylase activity during batch fermentation on MS medium
produced the same amount of acetate as the wild-type strain, while the
flux to ethanol was only very slightly limited. Despite a twofold
increase in pyruvate production, the fermentation rate was slightly
decreased and the ethanol production was unaffected. As a consequence,
we were unable to detect changes in the production of glycerol and
succinate, indicating that the redox balance is not significantly
modified in the mutant. Furthermore, the glycerol yields of
strains overexpressing GPD1, encoding
glycerol-3-phosphate dehydrogenase, were found to be similar in both V5
pdc1 and wild-type backgrounds (F. Remize and S. Dequin,
unpublished data). These data suggest that PDC is not a major factor in
controlling metabolic flux during fermentation in the sugar-rich and
low-nitrogen MS medium. This is consistent with the observation that a
fourfold overexpression of PDC did not enhance alcoholic fermentation
or growth rate (38) in growing shake flask cultures. In
contrast, it has been previously reported that a YSH 306 strain with
PDC2, which encodes a positive transcription regulator of
PDC1 and PDC5 and exhibits 19% of PDC residual
activity, deleted displays a decrease of 30% in ethanol yield,
resulting in increased glycerol formation in batch culture on YPD
medium (29). The limitation of the ethanol branch in this
mutant is probably due to PDC activities of both the wild-type YSH306
and the corresponding pdc2 mutant (29) lower than
those of V5 and V5 pdc1 (this study). In any case, our
results argue against a major role for PDC in controlling ethanol and
acetate flux.
Amplification of ACS2 did not result in enhanced acetate
utilization, despite a four- to sevenfold increase in ACS activity. A
high expression level of this enzyme might trigger perturbations of
metabolic flux, since the growth of the ACS2-overexpressed strain was affected, depending on the growth conditions. The
amplification of this enzymatic step could lead to increased ATP
consumption and to a modification of the intracellular pools of
acetyl-CoA and CoA, which are potent effectors of key enzymes in carbon
metabolism. Such modifications might explain both the reduction in
biomass formation and the stimulation of the fermentation rate during the stationary phase. Interestingly, a marked increase in acetate production was observed in a strain overexpressing ACS1 and
exhibiting a 6- to 12-fold increase in ACS activity in glucose-limited
chemostat cultures (4), which might reflect such modifications.
In contrast to PDC and ACS, the cytosolic acetaldehyde dehydrogenase
was shown to be a key enzyme for the control of acetate formation. A
requirement for Ald6p for optimal growth on glucose, suggesting a role
for Ald6p in acetate formation, was previously observed
(23), while others reported a wild-type phenotype for ald6 (49). In this study, the reduction and
increase of acetate formation by strains with ALD6 deleted
or overexpressing ALD6, respectively (and exhibiting growth
similar to that of the wild-type strain) clearly demonstrate that Ald6p
has a major role in acetate formation during sugar fermentation and
that the level of this enzyme controls the amount of acetate formed.
This is consistent with the observation of decreased acetate production
by a mutant exhibiting reduced NADP-dependent ACDH activity
(18).
An interesting finding is the observation that the mitochondrial
isoform Aldp4p might also be involved in the production of acetic acid
under certain circumstances. While ALD4 was shown to be
involved in growth on ethanol, its role on glucose was previously ruled
out on the basis of the observation that an ald4 mutant exhibited normal growth on this substrate (42). In contrast, it was reported that a double mutant (ald6 ald4) was no
longer able to grow on glucose, suggesting that both genes are involved in acetate formation during fermentation (49). In this
paper, we show that the deletion of ALD4 alleles did not
affect growth on glucose or acetate production, strongly supporting the
view that Ald4p does not play a role during fermentative metabolism. In
contrast, the altered growth and acetate production of the ald6
ald4 mutant suggest that Ald4p could partially replace the main
isoform, ALD6. In the absence of Ald6p, acetaldehyde
produced by decarboxylation of pyruvate would be transported from the
cytosol to the mitochondria to generate acetate and then acetyl-CoA in the cytosol. The existence of such a pathway, called the mitochondrial pyruvate dehydrogenase bypass, operative during respiratory metabolism, was recently proposed (2). The fact that the synthesis of
mitochondrial NAD(P)-dependent acetaldehyde dehydrogenase is repressed
in the presence of glucose (15) and the observation of a
wild-type phenotype for ald4 (this study) suggest that Ald4p
could be deregulated in the ald6 mutant. Furthermore, the
observation that the double mutant can grow, albeit slowly, and produce
acetate strongly suggests the contribution of one or more of the other
members of the ACDH family. Whether this additional gene(s) is
functional in a wild-type strain or induced to compensate for the loss
of Ald6p and Ald4p will need to be elucidated. These results are in
disagreement with the quasiabsence of growth of an ald6 ald4
mutant (referred as ald1 ald2) previously reported
(49). Although the delayed growth might have escaped
attention under the test conditions (the sizes of colonies formed on SD
plates after 6 days of growth), the discrepancies observed might be due
to differences in growth conditions or in the genetic backgrounds of
the strains. However, the observation that the double mutant V5
ald6 ald4 can grow on SD medium as well as on YPD medium in
the absence of acetate disproves the hypothesis of a growth medium
effect. On the other hand, we cannot exclude the possibility that the
strain V5 contains additional or differently regulated ALD
alleles. It was shown in this study (and by other unpublished data)
that this strain, a meiotic segregant of an industrial wine yeast
strain, is at least partially diploid. Moreover, wine yeast strains are
known to display structural chromosomal divergences from laboratory
strains, which may influence gene expression (33). A careful
study of ald6 ald4 mutants in different genetic backgrounds
will be necessary to specify the role of ALD4 and of the
other ALD genes coding for minor isoforms of the ACDH family.
The reduction of acetate production results in transient increased
formation of acetaldehyde. Since this compound is toxic to the cells
(16), the increased formation of 2,3-butanediol might
reflect a detoxication mechanism. On the other hand, the marked
increase in glycerol production observed is unexpected, since this
leads to a more pronounced deficit in reduced cofactors. Since the
Km of Ald6p for NAD is 170 times higher than
that of NADP (49), the deletion of ALD6 must
result in a decrease in NADPH formation. However, the NADP/NAD ratio
might also be affected in these mutants, depending on the contribution
of other ALDHs that can use NAD (Ald2p and Ald3p [28])
or NAD and NADP (Ald4p). The increased glycerol production, therefore,
could reflect deregulation mechanisms. Further characterization of
these mutants is needed to understand how the cell will cope with a
reduction of acetate production. In S. cerevisiae, the
couples NAD-NADH and NADP-NADPH constitute distinct biochemical
compartments due to the absence of transdehydrogenase activity
(20, 45). However, the existence of systems which could
serve as transdehydrogenase, producing NADPH from NADH, has recently
been postulated (e.g., the coupling of glycerol production and
degradation [30]). The existence of at least five ACDH
isoforms with different cofactor specificities, one being able to
suppress the loss of the other, as shown for Ald6p and Ald4p in this
study, supports the idea of a role for these isoenzymes in managing the
intracellular cytosolic and mitochondrial NADPH-NADH pools.
Genetic engineering strategies to minimize acetate formation are of
considerable interest for industrial purposes. In wine and beer, the
production of acetate in large amounts is undesirable. In
glycerol-overproducing yeast, acetate formation is greatly increased.
Furthermore, the reduction of acetate formation could also be of great
interest for the biomass-directed applications of S. cerevisiae, since acetate production may have a detrimental effect
on these applications. The results presented demonstrate that the level
of Ald6p controls the amount of acetate formed by S. cerevisiae on glucose. Deletion of ALD6 has been shown
to efficiently reduce acetate formation during wine fermentation. While
the amounts of acetaldehyde, glycerol, succinate, and 2,3-butanediol produced by the engineered strain under enological conditions were
slightly increased, they remained within the concentration ranges
commonly found in wines. Inactivation of Ald6p is therefore a promising
option for engineering industrial yeasts involved in these fermentation
fields. However, the increased production of compounds that play, in
particular, a role in maintaining the redox balance will have to be
specifically addressed in relation to the characteristics of the product.
 |
ACKNOWLEDGMENTS |
This work was supported by the European Community in the
framework of the Biotechnology-Cell Factory project BIO-CT95-0161.
We thank E. Baptista and C. Camarasa for assistance in fermentation
experiments and high-pressure liquid chromatography analyses.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: IPV-Laboratoire
de Microbiologie et Technologie des Fermentations, INRA, 2 Place Viala F-34060 Montpellier Cedex 2, France. Phone: (33) 4 99 61 25 28. Fax:
(33) 4 99 61 28 57. E-mail: dequin{at}ensam.inra.fr.
Present address: Department of Cell and Molecular
Biology/Microbiology, Göteborg University, SE-405 30 Göteborg, Sweden.
 |
REFERENCES |
| 1.
|
Bely, M.,
J. M. Sablayrolles, and P. Barre.
1990.
Automatic detection of assimilable nitrogen deficiencies during alcoholic fermentation in enological conditions.
J. Ferm. Bioeng.
70:246-252[CrossRef].
|
| 2.
|
Boubekeur, S.,
O. Bunnoust,
N. Camougrand,
M. Castroviejo,
M. Rigoulet, and B. Guerin.
1999.
A mitochondrial pyruvate dehydrogenase bypass in the yeast Saccharomyces cerevisiae.
J. Biol. Chem.
274:21044-21048[Abstract/Free Full Text].
|
| 3.
|
Bradford, M.
1976.
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
Anal. Biochem.
72:248-254[CrossRef][Medline].
|
| 4.
|
De Jong-Gubbels, P.,
M. A. van der Berg,
M. A. H. Luttik,
H. Y. Steensma,
J. P. van Dijken, and J. T. Pronk.
1998.
Overproduction of acetyl-coenzyme A synthetase isoenzymes in respiring Saccharomyces cerevisiae cells does not reduce acetate production after exposure to glucose excess.
FEMS Microbiol. Lett.
165:15-20[Medline].
|
| 5.
|
De Virgilio, C.,
N. Bürckert,
G. Barth,
J. M. Neuhaus,
T. Bollerand, and A. Wiemken.
1992.
Cloning and disruption of a gene required for growth on acetate but not on ethanol: the acetyl-coenzyme A synthetase gene of Saccharomyces cerevisiae.
Yeast
8:1043-1051[CrossRef][Medline].
|
| 6.
|
Dickinson, F. M.
1996.
The purification and some properties of the Mg2+-activated cytosolic aldehyde dehydrogenase of Saccharomyces cerevisiae.
Biochem. J.
315:393-399.
|
| 7.
|
El Haloui, N.,
D. Picque, and G. Corrieu.
1988.
Alcoholic fermentation in winemaking: on line measurement of density and carbon dioxide evolution.
J. Food Eng.
8:17-30[CrossRef].
|
| 8.
|
Fleet, H., and G. M. Heard.
1992.
Yeast growth during fermentation, p. 27-54.
In
G. Fleet (ed.), Wine microbiology and biotechnology. Harwood Academic Publishers, Chur, Switzerland.
|
| 9.
|
Flikweert, M. T.,
L. van der Zanden,
W. M. T. M. Janssen,
H. Y. Steesma,
J. P. van Dijken, and J. T. Pronk.
1996.
Pyruvate decarboxylase: an indispensable enzyme for growth of Saccharomyces cerevisiae on glucose.
Yeast
12:247-257[CrossRef][Medline].
|
| 10.
|
Hanhahan, D.
1985.
Techniques for transformation of E. coli, p. 109-135.
In
D. M. Glover (ed.), DNA cloning, vol. I. IRL Press, Oxford, England.
|
| 11.
|
Hohmann, S., and H. Cederberg.
1990.
Autoregulation may control the expression of yeast pyruvate decarboxylase in Saccharomyces cerevisiae.
Eur. J. Biochem.
188:615-621[Medline].
|
| 12.
|
Hohmann, S.
1991.
Characterization of PDC6, a third structural gene for pyruvate decarboxylase in Saccharomyces cerevisiae.
J. Bacteriol.
173:7963-7969[Abstract/Free Full Text].
|
| 13.
|
Hohmann, S.
1993.
Characterization of PDC2, a gene necessary for high level expression of pyruvate decarboxylase structural genes in Saccharomyces cerevisiae.
Mol. Gen. Genet.
241:657-666[CrossRef][Medline].
|
| 14.
|
Hough, J. S.,
D. E. Briggs,
R. Stevensand, and T. W. Young.
1982.
Beer flavour and beer quality, p. 839-876.
In
J. S. Hough (ed.), Malting and brewing science, vol. II. Chapman and Hall, London, United Kingdom.
|
| 15.
|
Jacobson, M. K., and C. Bernofsky.
1974.
Mitochondrial aldehyde dehydrogenase from Saccharomyces cerevisiae.
Biochem. Biophys. Acta
350:277-291[Medline].
|
| 16.
|
Jones, R. P.
1989.
Biological principles for the effects of ethanol.
Enzyme Microb. Technol.
11:130-153[CrossRef].
|
| 17.
|
Kratzer, S., and H. J. Shuller.
1995.
Carbon source-dependent regulation of the acetyl coenzyme A synthetase-encoding gene ACS1 from Saccharomyces cerevisiae.
Gene
161:75-79[CrossRef][Medline].
|
| 18.
|
Kurita, O., and H. Ito.
1994.
Isolation and characterization of mutants partially deficient in aldehyde dehydrogenase in Saccharomyces cerevisiae.
Biosci. Biotech. Biochem.
58:609-615.
|
| 19.
|
Kurita, O., and Y. Nishida.
1999.
Involvement of mitochondrial aldehyde dehydrogenase ALD5 in maintenance of the mitochondrial electron transport chain in Saccharomyces cerevisiae.
FEMS Microbiol. Lett.
187:281-287.
|
| 20.
|
Lagunas, R., and J. M. Gancedo.
1973.
Reduced pyridine nucleotide balance in glucose-growing Saccharomyces cerevisiae.
Eur. J. Biochem.
37:90-94[Medline].
|
| 21.
|
Larsson, N.,
J. Norbeck,
H. Karlsson,
K. A. Karlsson, and A. Blomberg.
1997.
Identification of two-dimensional gel electrophoresis resolved yeast proteins by matrix-assisted laser desorption ionisation mass spectrometry.
Electrophoresis
18:418-423[CrossRef][Medline].
|
| 22.
|
Llorente, N., and I. N. de Castro.
1977.
Physiological role of yeasts NAD(P)+ and NADP+-linked aldehyde dehydrogenases.
Rev. Esp. Fisiol.
33:135-142[Medline].
|
| 23.
|
Meaden, P. G.,
F. M. Dickinson,
A. Mifsud,
W. Teissier,
J. Westwater,
H. Bussey, and M. Midgley.
1997.
The ALD6 gene of Saccharomyces cerevisiae encodes a cytosolic, Mg2+-activated acetaldehyde dehydrogenase.
Yeast
13:1319-1327[CrossRef][Medline].
|
| 24.
|
Michnick, S.,
J. L. Roustan,
F. Remize,
P. Barre, and S. Dequin.
1997.
Modulation of glycerol and ethanol yields during alcoholic fermentation in Saccharomyces cerevisiae strains overexpressed or disrupted for GPD1 encoding glycerol-3-phosphate dehydrogenase.
Yeast
13:783-793[CrossRef][Medline].
|
| 25.
|
Miller, G. L.
1959.
Use of dinitrosalicylic acid reagent for determination of reducing sugar.
Anal. Chem.
31:426-428[CrossRef].
|
| 26.
|
Minet, M.,
M. E. Dufour, and F. Lacroute.
1992.
Complementation of Saccharomyces cerevisiae aoxotrophic mutants by Arabidopsis thaliana cDNAs.
Plant J.
2:417-422[Medline].
|
| 27.
|
Miralles, V. J., and R. Serrano.
1995.
A genomic locus in Saccharomyces cerevisiae with four genes up-regulated by osmotic stress.
Mol. Microbiol.
17:653-662[CrossRef][Medline].
|
| 28.
|
Navarro-Avino, J.,
R. Prasad,
V. J. Miralles,
R. M. Benito, and R. Serrano.
1999.
A proposal for nomenclature of aldehyde dehydrogenases in Saccharomyces cerevisiae and characterization of the stress-inducible ALD2 and ALD3 genes.
Yeast
15:829-842[CrossRef][Medline].
|
| 29.
|
Nevoigt, E., and U. Stahl.
1996.
Reduced pyruvate decarboxylase and increased glycerol-3-phosphate dehydrogenase [NAD+] levels enhance glycerol production in Saccharomyces cerevisiae.
Yeast
12:1331-1337[CrossRef][Medline].
|
| 30.
|
Norbeck, J., and A. Blomberg.
1997.
Metabolic and regulatory changes associated with growth of Saccharomyces cerevisiae in 1.4 M NaCl.
J. Biol. Chem.
272:5544-5554[Abstract/Free Full Text].
|
| 31.
|
Postma, E.,
C. Verduyn,
A. Scheffers, and J. P. van Dijken.
1989.
Enzymatic analysis of the crabtree effect in glucose-limited chemostat cultures of Saccharomyces cerevisiae.
Appl. Environ. Microbiol.
55:468-477[Abstract/Free Full Text].
|
| 32.
|
Pronk, J. T.,
H. Y. Steesma, and J. P. van Dijken.
1996.
Pyruvate metabolism in Saccharomyces cerevisiae.
Yeast
12:1607-1633[CrossRef][Medline].
|
| 33.
|
Rachidi, N.,
P. Barre, and B. Blondin.
1999.
Multiple Ty-mediated chromosomal translocations lead to karyotype changes in a wine yeast strain of Saccharomyces cerevisiae.
Mol. Gen. Genet.
261:841-850[CrossRef][Medline].
|
| 34.
|
Remize, F.,
J. L. Roustan,
J. M. Sablayrolles,
P. Barre, and S. Dequin.
1999.
Glycerol overproduction by engineered Saccharomyces cerevisiae wine yeast strains leads to substantial changes in by-product formation and to a stimulation of fermentation rate in stationary phase.
Appl. Environ. Microbiol.
65:143-149[Abstract/Free Full Text].
|
| 35.
|
Sablayrolles, J. M.,
P. Barre, and P. Grenier.
1987.
Design of laboratory automatic system for studying alcoholic fermentations in anisothermal enological conditions.
Biotechnol. Tech.
1:181-184.
|
| 36.
|
Saigal, D.,
S. J. Cunningham,
J. Farrès, and H. Weiner.
1991.
Molecular cloning of the mitochondrial dehydrogenase gene of Saccharomyces cerevisiae by genetic complementation.
J. Bacteriol.
173:3199-3208[Abstract/Free Full Text].
|
| 37.
|
Sambrook, J.,
E. F. Fritsch, and T. Maniatis.
1989.
Molecular cloning: a laboratory manual, 2nd ed.
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
|
| 38.
|
Schaaf, I.,
J. B. A. Green,
D. Gozalbo, and S. Hohmann.
1989.
A deletion of the PDC1 gene for pyruvate decarboxylase of yeast causes a different phenotype than previously isolated point mutations.
Curr. Genet.
15:75-81[CrossRef][Medline].
|
| 39.
|
Schiestl, R. H., and R. D. Gietz.
1989.
High efficiency transformation of intact cells using single stranded nucleic acid as carrier.
Curr. Genet.
16:339-346[CrossRef][Medline].
|
| 40.
|
Seeboth, P. G.,
K. Bohnsack, and C. P. Hollenberg.
1990.
pdc10 mutants of Saccharomyces cerevisiae give evidence for an additional structural PDC gene: cloning of PDC5, a gene homologous to PDC1.
J. Bacteriol.
172:678-685[Abstract/Free Full Text].
|
| 41.
|
Seegmiller, J. E.
1955.
TNP-linked aldehyde dehydrogenase from yeast.
Methods Enzymol.
1:511-514[CrossRef].
|
| 42.
|
Teissier, W. D.,
P. G. Meaden,
F. M. Dickinson, and M. Midgley.
1998.
Identification and disruption of the gene encoding the K+-activated acetaldehyde dehydrogenase of Saccharomyces cerevisiae.
FEMS Microbiol. Lett.
164:29-34[CrossRef][Medline].
|
| 43.
|
Van den Berg, M. A., and H. Y. Steesma.
1995.
ACS2, a Saccharomyces cerevisiae gene encoding acetyl-coenzyme A synthetase, essential for growth on glucose.
Eur. J. Biochem.
231:704-713[Medline].
|
| 44.
|
Van den Berg, M. A.,
P. de Jong-Gubbels,
H. Y. Steesma,
J. P. van Dijken, and J. T. Pronk.
1996.
The two acetyl-coenzyme A synthetases of Saccharomyces cerevisiae differ with respect to kinetic properties and transcriptional regulation.
J. Biol. Chem.
271:28953-28959[Abstract/Free Full Text].
|
| 45.
|
van Dijken, J. P., and W. A. Scheffers.
1986.
Redox balances in the metabolism of sugar by yeasts.
FEMS Microbiol. Rev.
32:199-224[CrossRef].
|
| 46.
|
Van Urk, H.,
W. S. L. Voll,
W. A. Scheffers, and J. P. van Dijken.
1990.
Transient-state analysis of metabolic fluxes in Crabtree-positive and Crabtree-negative yeasts.
Appl. Environ. Microbiol.
56:281-287[Abstract/Free Full Text].
|
| 47.
|
Vernet, T.,
D. Dignard, and D. Thomas.
1987.
A family of yeast expression vectors containing the phage f1 intergenic region.
Gene
52:225-233[CrossRef][Medline].
|
| 48.
|
Wach, A.,
A. Brachat,
R. Pöhlmann, and P. Philippsen.
1994.
New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae.
Yeast
10:1793-1808[CrossRef][Medline].
|
| 49.
|
Wang, X.,
C. J. Mann,
Y. Bai,
L. Ni, and H. Weiner.
1998.
Molecular cloning, characterization, and potential roles of cytosolic and mitochondrial aldehyde dehydrogenases in ethanol metabolism in Saccharomyces cerevisiae.
J. Bacteriol.
180:822-830[Abstract/Free Full Text].
|
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Cronwright, G. R., Rohwer, J. M., Prior, B. A.
(2002). Metabolic Control Analysis of Glycerol Synthesis in Saccharomyces cerevisiae. Appl. Environ. Microbiol.
68: 4448-4456
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