Previous Article | Next Article 
Applied and Environmental Microbiology, August 2000, p. 3487-3491, Vol. 66, No. 8
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Evaluation of Fluorescently Labeled Lectins for
Noninvasive Localization of Extracellular Polymeric Substances in
Sphingomonas Biofilms
Anders R.
Johnsen,1
Martina
Hausner,2,*
Annette
Schnell,2 and
Stefan
Wuertz2
National Environmental Research Institute,
Department of Microbial Ecology and Biotechnology, Frederiksborgvej
399, DK-4000 Roskilde, Denmark,1 and
Institute of Water Quality Control and Waste Management,
Technical University of Munich, Am Coulombwall, 85748 Garching,
Germany2
Received 24 January 2000/Accepted 10 May 2000
 |
ABSTRACT |
Three strains of Sphingomonas were grown as biofilms
and tested for binding of five fluorescently labeled lectins (Con
A-type IV-TRITC or -Cy5, Pha-E-TRITC, PNA-TRITC, UEA 1-TRITC, and
WGA-Texas red). Only ConA and WGA were significantly bound by the
biofilms. Binding of the five lectins to artificial biofilms made of
the commercially available Sphingomonas extracellular
polysaccharides was similar to binding to living biofilms. Staining of
the living and artificial biofilms by ConA might be explained as
binding of the lectin to the terminal mannosyl and terminal glucosyl
residues in the polysaccharides secreted by Sphingomonas as
well as to the terminal mannosyl residue in glycosphingolipids.
Staining of the biofilms by WGA could only be explained as binding to
the Sphingomonas glycosphingolipid membrane, binding to the
cell wall, or nonspecific binding. Glycoconjugation of ConA and WGA
with the target sugars glucose and N-acetylglucosamine,
respectively, was used as a method for evaluation of the specificity of
the lectins towards Sphingomonas biofilms and
Sphingomonas polysaccharides. Our results show that the
binding of lectins to biofilms does not necessarily prove the presence
of specific target sugars in the extracellular polymeric substances
(EPS) in biofilms. The lectins may bind to non-EPS targets or adhere
nonspecifically to components of the biofilm matrix.
 |
INTRODUCTION |
Lectins are a group of diverse
proteins which bind to specific configurations of sugar residues. The
binding of lectins to sugar residues present in polysaccharides
resembles the specific binding of antibodies to antigens
(4). Lectins have been widely used to characterize surfaces
of eucaryotic cells and polysaccharides. Recently, fluorescently
labeled lectins have been applied in the study of biofilm formation and
biofilm composition. Excretion of adhesive polymers during attachment
of bacterial cells to surfaces has been described using a panel of
fluorescent lectins (9, 14, 20). The formation of biofilms
on living and nonliving surfaces has been investigated with lectins
(17). Lectins in conjunction with confocal laser scanning
microscopy (CLSM) have been valuable tools in the study of the
three-dimensional structure of biofilms (12, 15) or of the
composition of extracellular polymeric substances (EPS) involved in
accumulation of chlorinated organic compounds (24). Strains
of Sphingomonas spp. are known for their interesting
catabolic capabilities to degrade a wide variety of environmentally
hazardous compounds, including polycyclic aromatics (25),
dioxine compounds (6), and chlorinated phenols (3). Theoretically, lectins may be used to study the
interaction between Sphingomonas cells and environmental
surfaces during biofilm formation or to investigate the interaction of
EPS with organic compounds. The common approach has been to deduce the
structure or composition of biofilm EPS on the basis of the specific
binding of lectins to different sugar residues. In this study, we
evaluate the use of lectins for the characterization of
Sphingomonas biofilms by investigating the binding of five
fluorescent lectins with known specificities to Sphingomonas
biofilms and to industrially produced Sphingomonas
exopolysaccharides (sphingans) with known molecular structures.
 |
MATERIALS AND METHODS |
Bacterial strains and growth conditions.
Sphingomonas
paucimobilis EPA505 was obtained from J. Mueller (19),
and Sphingomonas sp. strain LH128 and
Sphingomonas sp. strain LB126 were received from L. Bastiaens (1). All strains were stored in 43% glycerol at
80°C. The bacteria were grown at room temperature in phosphate
minimal medium supplemented with glucose as the sole carbon source
(PMMG) containing (in grams/liter) the following: glucose, 2;
Na2HPO4 · 2H2O, 0.875;
KH2PO4, 0.1; (NH4)2SO4, 0.25;
MgCl2 · 6H2O, 0.05;
CaCl2 · 2H2O, 0.015; NaNO3, 0.018. The medium was amended with 5 ml of a trace element
solution consisting of (in milligrams/liter) the following:
Na-EDTA, 800; FeCl2, 300; MnCl2
· 4H2O, 10; CoCl2 · 6H2O,
4; CuSO4, 1; Na2MoO4 · 2H2O, 3; ZnCl2, 2; LiCl, 0.5;
SnCl2 · 2H2O, 0.5;
H3BO3, 1; KBr, 2; KI, 2; BaCl2,
0.5. Phosphate and glucose were autoclaved separately.
Cultivation of biofilms on microscope slides.
Single-species
biofilms were grown on Cel-Line HTC printed microscope slides with six
wells on each slide (Cel-Line Associates, Inc., Newfield, N.J.). The
slides were sterilized overnight in an oven at 200°C and transferred
to sterile petri dishes. One drop of a bacterial culture grown
overnight in PMMG was added to each well, and the cells were allowed to
attach to the surface for 1 h. PMMG was gently poured into the
petri dishes to cover the slides with medium. The petri dishes with the
slides were incubated on a slowly tilting table (Heidolph Duomax,
Kelheim, Germany) for 3 days (LB126 and LH128) or 5 days (EPA505).
Binding of lectins to Sphingomonas biofilms.
Each strain was tested for binding of the five fluorescently labeled
lectins: Con A-TRITC type IV (Canavalia ensiformis), Pha-E-TRITC (Phaseolus vulgaris), PNA-TRITC (Arachis
hypogaea), UEA 1-TRITC (Ulex europaeus), all obtained
from Sigma (Deisenhofen, Germany), and WGA-Texas red (Triticum
vulgaris) obtained from Molecular Probes (Eugene, Oreg.). The
affinity, the molecular weight, and the fluorophore content of the
lectins are listed in Table 1. The
biofilms were checked for contamination by streaking 10 µl of the
overlying growth medium on Luria-Bertani plates. Slides with biofilms
were washed in phosphate-buffered saline (PBS) (pH 6.8) consisting of
(in grams/liter) the following: Na2HPO4, 0.2;
NaH2PO4, 1.44; NaCl, 8.0; KCl, 0.2;
CaCl2, 0.011; MnCl2, 0.013. The areas around
the wells were blotted dry. Lectin stock solutions of 1.0 or 2.5 mg/ml
were prepared by dissolving lectins in PBS containing 0.05%
NaN3 to prevent microbial growth. Working solutions of 0.1 mg of lectin per ml were made by dilution of lectin stocks in PBS
containing the nucleic acid stain PicoGreen (Molecular Probes) in a
1:500 dilution. Working solutions were centrifuged at 8,000 × g for 5 min before use. The supernatant (10 µl) was added to
each well, and the slides were incubated for 15 min in the dark on a
piece of wet paper in a petri dish. Biofilms incubated with PBS
containing PicoGreen were used as controls. After incubation, each well
was washed with 1 ml of PBS, the slides were immersed for 30 min in PBS
in the dark, and slides were examined by epifluorescence microscopy.
In order to check the washing efficiency and to eliminate the
possibility of unspecific signals due to insufficient washing times,
Sphingomonas sp. strain LH128 biofilms were grown on slides and stained with the lectins ConA and WGA. The control slides were
transferred to fresh PBS every 30 min for a total of 30, 60, and 90 min
in PBS in the dark and were prepared in such a way that all slides were
ready for microscopy at the same time. Two wells were used for each treatment.
Lectins tagged with TRITC and Texas red were observed with Zeiss filter
set No. 15 (excitation filter BP 546/12, beamsplitter FT 580, and
emission filter LP 590). PicoGreen was observed with Zeiss filter set
No. 09 (excitation filter BP 450-490, beamsplitter FT 510, and emission
filter LP 520). The labeling procedure differs from other protocols
(9, 12, 15, 16) by using 0.1 mg of lectin/ml rather than 1 to 5 mg/ml and also by using longer wash times.
Preincubation of lectins with target sugars.
Binding sites
of ConA were blocked with the target sugar D-glucose
(4, 22), and the binding sites of WGA were blocked with the
target sugar N-acetyl-D-glucosamine
(23). Lectin stock solutions were diluted with sugar stock
solutions to final concentrations of 1.0 or 0.1 mg/ml for lectins and
10 or 50 mg/ml for sugars (Table 2). The
mixtures were incubated in the dark for 1 h, and the affinities of
the lectins for EPA505 biofilms were assayed as described above, using
the lectin-sugar solutions as working solutions. PicoGreen was included
in the working solutions in a 1:500 dilution as a counterstain. Wells
with no sugars, no lectins, or no sugars and no lectins were used as
controls.
View this table:
[in this window]
[in a new window]
|
TABLE 2.
Effect of blocking ConA and WGA sugar binding sites with
target sugars on binding of the lectins to EPA505
biofilmsa
|
|
Binding of ConA and WGA to commercially available sphingans.
Three of the Sphingomonas exopolysaccharides (sphingans),
gellan, welan, and rhamsan, were produced by Kelco, Inc. (San Diego, Calif.). Clarified gellan was purchased from Sigma under the trade name
Phytagel. Industrial grade welan and rhamsan were a gift from Mikael
Grathwohl (Ringsted og Semler A/S, Copenhagen, Denmark). The sphingans
(250 µg per ml) were hydrated in Tris buffer (20 µM Tris-HCl, 10 µM CaCl2, pH 6.8) for 1 h and dissolved by
autoclaving at 121°C for 5 min. The resulting solutions were
centrifuged at 15,000 × g for 10 min. Printed
microscope slides were coated with the sphingans by adding 50 µl of
sphingan solution to each well and evaporating the water at 110°C for
2 h. The slides were washed in distilled water and stained with
ConA and WGA as described above, omitting PicoGreen from the staining solutions.
Semiquantitative estimation of the binding of fluorescent lectins
to biofilms or to commercially available polysaccharides.
The
degree of binding of lectins to biofilms was estimated simply by
looking at the biofilms with the microscope in the fluorescence mode.
The fluorescence intensities were divided into groups showing strong
fluorescence (+++), medium fluorescence (++), low fluorescence (+), and
no fluorescence (
). In each experiment, a positive control slide
(ConA, strong fluorescence) and a negative control slide (biofilm
without lectin, no fluorescence) were compared to the biofilms under
investigation. In the experiments with gellan, welan, and rhamsan, all
three polysaccharides were compared to each other at the same time by
switching back and forth between the slides. Biofilms were grown and
screened at least twice. For replicates with divergent ratings, the
experiments were done in triplicate.
Cultivation of biofilms in flow cells.
The bacteria were
cultivated as continuous cultures in flow cells, which could be fitted
directly on a microscope table for noninvasive analysis of the
biofilms. Four parallel flow cells, each 4 by 7 by 40 mm, were drilled
in stainless steel and fitted with short inlet and outlet tubes also
made of stainless steel. The flow cells were assembled by applying
silicone rubber around each channel and adding glass coverslips on top
of the silicone. Silicone tubing was connected to the inlets and
outlets, and the flow system was autoclaved. Medium was pumped through
the sterile flow system with a multichannel peristaltic pump at a rate
of 5 ml/h. The flow cells were inoculated by stopping the flow,
clamping off the inlet tubes, and injecting 0.3 ml of overnight
cultures into the flow cells through the inlet tubes by using 1-ml
syringes with thin hypodermic needles. The flow of the medium was
restarted after 1 h, and the flow cells were incubated for 3 days
at room temperature.
Lectin staining of biofilms in flow cells.
ConA (Sigma) was
tagged with the fluorophore Cy5 by using an Amersham Life Science
FluoroLink Cy5 AB-Labelling Kit (Amersham Pharmacia Biotech UK,
Buckinghamshire, England) as described by the manufacturer. The flow
cells with the biofilms were washed with PBS for 30 min at a flow rate
of 15 ml per h, and the liquid content of each flow cell was displaced
by injection of 1.3 ml of lectin working solution through the inlet
tubes. After 30 min of incubation, the flow cells were washed for 30 min at a flow rate of 15 ml per h. Stacks of digital images based on
lectin and PicoGreen fluorescence were collected from selected areas of
the biofilms with a CLSM 410 confocal laser scanning microscope coupled
to an Axiovert 135M inverted microscope (both instruments from C. Zeiss, Jena, Germany). Images were generated using a 40×, 1.3 numerical aperture oil immersion lens, a pinhole value of 20 or 22, and
a digital zoom factor of 2.5 or 5.0. WGA-Texas red images were
collected using the 543-nm laser line and an LP590 emission filter.
ConA-Cy5 was excited with the 633-nm laser line and collected using a
LP 665 emission filter. PicoGreen images were obtained using the 488-nm
laser line and a BP515-540 emission filter. The image dynamics were
improved digitally with the computer program Adobe Photoshop 3.0.
 |
RESULTS AND DISCUSSION |
Binding of lectins to Sphingomonas biofilms and to
commercially available sphingans.
Biofilms of the three
Sphingomonas strains were analyzed for binding of the
five lectins shown in Table 1. The reproducibility of results was
generally high. The binding of WGA to strain LH128 (Fig.
1) and of ConA to strain EPA505
(Fig. 2) demonstrate that fluorescence
from WGA and ConA is closely associated with the cells and that the
strongest fluorescence emanated from groups of cells and
microcolonies. Control experiments with PicoGreen alone
gave no signals with the CLSM settings used for WGA-Texas red and
ConA-Cy5.

View larger version (83K):
[in this window]
[in a new window]
|
FIG. 1.
(A) CLSM transmission image of a microcolony of
Sphingomonas sp. strain LH128 grown as a biofilm in a flow
cell. (B) CLSM-extended depth of focus image of the same microscopic
field showing fluorescence from the Texas red-labeled WGA lectin. The
image was constructed from 15 xy sections with a vertical
distance of 2 µm between successive images. Scale bar, 10 µm.
|
|

View larger version (56K):
[in this window]
[in a new window]
|
FIG. 2.
(A) CLSM-extended depth of focus image of two
microcolonies of S. paucimobilis strain EPA505 stained with
the nucleic acid stain PicoGreen. (B) CLSM-extended depth of focus
image of the same microscopic field showing ConA-TRITC fluorescence.
Both images are projections constructed from 20 xy sections
with a vertical distance of 2 µm between successive images. Scale
bar, 20 µm.
|
|
The results of the lectin binding were similar among the strains (Table
3), showing strong fluorescence from ConA
and medium fluorescence from WGA. In addition, Pha-E gave a weak
but reproducible signal from biofilms of strain LB126 and
strain EPA505, and PNA gave a weak signal from strain LB126. Controls
without lectins were negative. Washing controls using strain LH128
showed that strong lectin-conferred fluorescence persisted even after
repeated washing steps in PBS (Table 4).
The relatively low fluorescence (++) seen for ConA after 30 min (Table
4) is difficult to explain but is probably due to random variation.
We have estimated the binding of fluorescent lectins to biofilms by
microscopically observing the biofilms in the fluorescence mode and
dividing them into groups showing strong fluorescence, medium
fluorescence, low fluorescence, and no fluorescence. The fluorescence
conferred by bound ConA was considered to be a positive reference since
it showed strong fluorescence in all experiments. In addition, a
negative reference (biofilm without lectin) was also set up. All
observed biofilms were always compared to the positive and negative
references, and the evaluation of the fluorescence was based on
parallel repeats of the experiments. Thus, even though this is a very
subjective assay and should only be regarded as semiquantitative, it is
a very quick and easy assay resulting in generally similar estimates
among replicates.
The fluorophore-to-lectin ratio varied from 1.2 for PhaE to 4.1 for
UEA-1 (Table 1), so one should be cautious when comparing the binding
efficiencies of different lectins to biofilms of the same species by
estimating fluorescence intensity (Table 3). This is especially true
for WGA-Texas red, which has excitation and emission wavelengths which
are different from those of TRITC and are suboptimal for the filter
combinations used.
The binding of ConA and WGA to artificial biofilms of the sphingans
gellan, welan, and rhamsan is shown in Table
5. Incubation of ConA with welan
films resulted in high fluorescence, whereas incubation with gellan and
rhamsan gave medium fluorescence. Incubation of WGA with welan, gelan,
and rhamsan films showed medium fluorescence.
The low fluorescence from PhaE-TRITC in the living and in the
artificial biofilms could be a result of the low fluorophore/lectin ratio
(Cfluorophore/Clectin = 1.2), but it also agrees well with low binding to sphingans since
PhaE binds preferentially to galactose residues within polysaccharides
(13) and consequently would not be expected to bind to
Sphingomonas exopolysaccharides. The very low fluorescence
from UEA-1
(Cfluorophore/Clectin = 4.1) and PNA
(Cfluorophore/Clectin = 2.0), despite the high fluorophore-to-lectin ratios, clearly
demonstrates that
-L-fucose and
-galactose(1
3)N-acetyl-galactosamine are not present
in the biofilms of the three Sphingomonas species tested or
in the artificial biofilms.
Bacteria belonging to the genus Sphingomonas are known to
secrete acidic exopolysaccharides (sphingans) that contain a common repeating backbone (21). The repeating tetrasaccharide is
[
3)-
-D-Glc-(1
4)-
-D-GlcA-(1
4)-
-D-Glc-(1
4)-
-L-Rha or L-Man(1
], where Glc is glucose, GlcA is glucuronic
acid, Rha is rhamnose, and Man is mannose. In addition, some of the
polysaccharides contain mono- or disaccharide side chains consisting of
-L-Man,
-L-Rha,
-D-Glc, or
-D-Glc (2, 18).
In our experiments, ConA did bind to biofilms of the three
Sphingomonas strains as well as the three artificial
sphingan films. ConA-conferred fluorescence was not affected by
increased washing times (Table 4). Goldstein et al. (4)
reported that ConA reacts only with terminal units of dextrans, and
that there is a linear relationship between the extent of branching of
dextrans, i.e., the number of terminal residues, and the degree of
binding of ConA to the dextran (4). ConA did not react with
linear polysaccharides, even though they possessed the requisite
-D-glucosyl units (4). Binding of ConA to
artificial welan and rhamsan films is expected since these sphingans
contains side chains with terminal mannosyl and glucosyl residues
(2, 18). Gellan, on the other hand, is a linear
polysaccharide, and binding of ConA to artificial gellan films must be
either nonspecific or specific binding to nonsphingan material.
The genus Sphingomonas is characterized by the lack of a
lipopolysaccharide membrane and the presence of a glycosphingolipid membrane consisting of dihydrosphingosine coupled to glucuronic acid or the tetrasaccharide
[
-D-Man- (1
3)-
-D-Gal-(1
6)-
-D-GlcN-(1
4)-
-D-GlcA-(1
], where
Gal is galactose (10, 11). Binding of ConA to living Sphingomonas biofilms and to artificial sphingan
biofilms might be explained as binding to the terminal mannosyl
and terminal glycosyl residues in the exopolysaccharides as well as
binding to the terminal mannosyl residue in the sphingolipids.
Strong and reproducible binding of WGA to the tested
Sphingomonas strains (Table 3), even after extended washing
periods (Table 4), and to the tested sphingans (Table 5) is somewhat intriguing since WGA binds to N-acetylglucosamine and
substituted N-acetylglucosamines (Table 1), but these sugars
are not present in the repeating units of any of the published
sphingans (2, 21). In fact, the WGA-conferred fluorescent
signal intensities did not decrease with increasing washing times
(Table 4). WGA either binds to non-EPS N-acetylglucosamine
residues in the biofilms or binding of WGA is nonspecific. Alternative
binding sites in the biofilms could include the glucosaminyl residues
in the tetrasaccharide part of the Sphingomonas
glycosphingolipid membrane or N-acetylglucosamine and
N-acetylmuramic acid from the peptidoglycan cell wall. This raises the general question of whether binding of lectins to complex biofilms does not involve sugars present in the biofilm EPS, but rather
binding to sugars present in the lipopolysaccharide membranes of the
gram-negative organisms of Bacteria or binding to other non-EPS sites.
The glycosphingolipid tetrasaccharide also contains galactose,
and it could be argued that if WGA binds to the glycosphingolipids then PhaE should also bind. However, the binding efficiency of PhaE to
galactosyl residues is greatly influenced by neighboring sugar residues in the polysaccharide (13), which may inhibit the binding of PhaE to sites in the glycosphingolipid.
Preincubation of lectins with target sugars.
The
lectins ConA and WGA were preincubated with target sugars to
block the binding sites as a confirmation of the specificity of the
lectin binding to the EPA505 biofilms (Table 2). There was no reduction
in the binding of ConA and WGA when using 1 mg of lectin/ml and 50 mg
of target sugars/ml compared to that of the controls without target
sugars. This indicates that the target sugar-to-lectin ratio was not
sufficiently high to block the binding sites of the lectins. Reducing
the lectin concentration to 0.1 mg/ml yielded a reduction in the lectin
signal intensity, compared to that of bound lectin at 1.0 mg/ml. Adding
target sugars at concentrations of 10 and 50 mg/ml to the working
solutions with 0.1 mg/ml lectin decreased the binding of the lectin,
but surprisingly there was still some binding of the lectins even at a
target sugar concentration of 50 mg/ml. This suggests that some lectin
was bound nonspecifically to the biofilms.
Inactivation of antibodies by "blinding" the binding site with a
specific hapten is often used in antibody assays as a control experiment or as a means to determine the activity of an antibody solution (e.g., see reference 5). Likewise,
glycoconjugate-blinded lectins, in which the binding sites of the
lectins are blocked with target sugars, are recommended by Hartmann et
al. (7) as control experiments for nonspecific binding of
lectins to biofilms. Michael and Smith (17) found that
emission from ConA-fluorescein isothiocyanate (ConA-FITC) was
undetectable following coincubation of biofilms with ConA-FITC and the
sugar competitor
-methyl mannoside.
Glycoconjugation is indeed used as a standard method for determining
the specificity of lectins towards various sugars and polysaccharides
(4). On the product information sheet, Sigma informs that
agglutination by ConA of a 1.3% suspension of red blood cells could be
inhibited by N-acetyl-D-glucosamine, sucrose, fructose, mannose, glucose, or methyl
-D-mannopyranoside
at concentrations of 78 to 625 µg/ml. We observed no reduction in
binding of 1.0 mg of ConA or WGA per ml to biofilms in the presence of
10 mg of glucose or N-acetyl glucosamine per ml (Table 2).
Reducing the lectin concentration to 0.1 mg/ml, which is 10 to 50 times less than the recommended concentration (16), and increasing the target sugar concentration to 50 mg/ml resulted only in partial inhibition of the lectin binding. Our interpretation of these findings
is that part of the bound lectin, namely, the part which does not bind
in the presence of target sugars, is bound to specific sugar residues
in the biofilm. Another part, the part which binds in the presence of
target sugars, is bound nonspecifically to the biofilm. Our results
show that binding of lectins to Sphingomonas biofilms does
not necessarily prove the presence of specific target sugars in the
biofilm EPS. The lectins might be bound to non-EPS targets or bound
nonspecifically to the biofilm matrix.
 |
ACKNOWLEDGMENTS |
We thank Dirk Springael for critically reading the manuscript and
for suggestions.
This work was supported in part by the Research Center for Fundamental
Studies of Aerobic Biological Wastewater Treatment (SFB 411, Munich,
Germany) and the EU Biotech Program (Contract BIO4-CT97-2015).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Institute of
Water Quality Control and Waste Management, Technical University of
Munich, Am Coulombwall, 85748 Garching, Germany. Phone:
49(0)89/289-13733. Fax: 49(0)89/289-13718. E-mail:
M.Hausner{at}bv.tu-muenchen.de.
 |
REFERENCES |
| 1.
| Bastiaens, L., D. Springael, P. Wattiau, H. Harms,
R. deWachter, H. Verachtert, and L. Diels. Isolation of adherent
polycyclic aromatic hydrocarbon (PAH)-degrading bacteria using
PAH-sorbing carriers. Appl. Environ. Microbiol.
66:1834-1843.
|
| 2.
|
Chandrasekaran, R., and A. Radha.
1995.
Molecular architectures and functional properties of gellan gum and related polysaccharides.
Trends Food Sci. Technol.
6:143-148.
|
| 3.
|
Edere, M.,
R. Crawford,
R. Herwig, and C. Orser.
1997.
PCP degradation is mediated by closely related strains of the genus Sphingomonas.
Mol. Ecol.
6:39-49[CrossRef][Medline].
|
| 4.
|
Goldstein, I. J.,
C. E. Hollerman, and J. M. Merrick.
1965.
Protein-carbohydrate interaction. I. The interaction of polysaccharides with concanavalin A.
Biochim. Biophys. Acta
97:68-76.
|
| 5.
|
Hahn, A.,
F. Frimmel,
A. Haisch,
G. Henkelmann, and B. Hock.
1992.
Immunolabelling of atrazine residues in soil.
Z. Pflanzenernaehr. Bodenkd.
155:203-208.
|
| 6.
|
Halden, R. U.,
B. G. Halden, and D. F. Dwyer.
1999.
Removal of dibenzofuran, dibenzo-p-dioxin, and 2-chlorodibenzo-p-dioxin from soils inoculated with Sphingomonas sp. strain RW1.
Appl. Environ. Microbiol.
65:2245-2249.
|
| 7.
|
Hartmann, A.,
J. R. Lawrence,
B. Assmus, and M. Schloter.
1998.
Detection of microbes by laser confocal microscopy.
Mol. Microb. Ecol. Manual
4.1.10:1-34.
|
| 8.
|
Haugland, R. P.
1999.
Lectin conjugates, p. 141-142.
In
M. T. Z. Spence (ed.), Handbook of fluorescent probes and research chemicals. Molecular Probes, Inc., Eugene, Oreg.
|
| 9.
|
Hood, M., and J. Smidt.
1996.
The examination of Seliberia stellata exopolymers using lectin assays.
Microb. Ecol.
31:281-290[Medline].
|
| 10.
|
Kawahara, K.,
U. Seydel,
M. Matsuura,
H. Danbara,
E. T. Rietschel, and U. Zaehringer.
1991.
Chemical structure of glycosphingolipids isolated from Sphingomonas paucimobilis.
FEBS Lett.
292:107-110[CrossRef][Medline].
|
| 11.
|
Kawasaki, S.,
R. Moriguchi,
K. Sekiya,
T. Nakai,
E. Ono,
K. Kume, and K. Kawahara.
1994.
The cell-envelope structure of the lipopolysaccharide-lacking gram-negative bacterium Sphingomonas paucimobilis.
J. Bacteriol.
176:284-290[Abstract/Free Full Text].
|
| 12.
|
Kolari, M.,
K. Matilla,
R. Mikkola, and M. S. Salkinoja-Salonen.
1998.
Community structure of biofilms on ennobled stainless steel in Baltic sea water.
J. Ind. Microbiol. Biotechnol.
21:261-274[CrossRef].
|
| 13.
|
Kornfeld, R., and S. Kornfeld.
1970.
The structure of a phytohemeagglutinin receptor site from human erythrocytes.
J. Biol. Chem.
245:2536-2545[Abstract/Free Full Text].
|
| 14.
|
Langille, S. E., and R. M. Weiner.
1998.
Spatial and temporal deposition of Hyphomonas strain VP-6 capsules involved in biofilm formation.
Appl. Environ. Microbiol.
64:2906-2913[Abstract/Free Full Text].
|
| 15.
|
Lawrence, J. R.,
T. R. Neu, and G. D. W. Swerhone.
1998.
Application of multiple parameter imaging for the quantification of algal, bacterial and exopolymer components of microbial biofilms.
J. Microbiol. Methods
32:253-261.
|
| 16.
|
Lawrence, J. R.,
G. M. Wolfaardt, and T. R. Neu.
1998.
The study of biofilms using confocal laser scanning microscopy, p. 431-465.
In
M. H. F. Wilkinson, and F. Schut (ed.), Digital image analysis of microbes: morphometry, fluorometry and motility techniques and applications. John Wiley and Sons Ltd., New York, N.Y.
|
| 17.
|
Michael, T., and C. M. Smith.
1995.
Lectins probe molecular films in biofouling: characterization of early films on non-living and living surfaces.
Mar. Ecol. Prog. Ser.
119:229-236.
|
| 18.
|
Moorhouse, R.
1987.
Structure/property relationships of a family of microbial polysaccharides, p. 187-206.
In
M. Yalpani (ed.), Industrial polysaccharides. Genetic engineering, structure/property relations and applications Elsevier, Amsterdam, The Netherlands.
|
| 19.
|
Mueller, J. G.,
P. J. Chapman,
B. O. Blattmann, and P. H. Pritchard.
1990.
Isolation and characterization of a fluoranthene-utilizing strain of Pseudomonas paucimobilis.
Appl. Environ. Microbiol.
56:1079-1086[Abstract/Free Full Text].
|
| 20.
|
Neu, T. R., and K. C. Marshall.
1991.
Microbial "footprints" a new approach to adhesive polymers.
Biofouling
3:101-112.
|
| 21.
|
Pollock, T. J.
1993.
Gellan-related polysaccharides and the genus Sphingomonas.
J. Gen. Microbiol.
139:1939-1955.
|
| 22.
|
Reeke, G.,
J. Becker,
B. Cunningham,
G. Gunther,
J. Wang, and G. Edelman.
1974.
Relationships between the structure and activities of concanavalin A.
Ann. N. Y. Acad. Sci.
234:369-382[Medline].
|
| 23.
|
Voet, D., and J. G. Voet.
1994.
Biochemie, p. 247.
Wiley-VCH, Weinheim, Germany.
|
| 24.
|
Wolfaardt, G., and J. Lawrence.
1998.
In situ characterization of biofilm exopolymers involved in the accumulation of chlorinated organics.
Microb. Ecol.
35:213-223[CrossRef][Medline].
|
| 25.
|
Ye, D.,
M. A. Siddiqi,
A. E. Maccubbin,
S. Kumar, and H. C. Sikka.
1996.
Degradation of polynuclear aromatic hydrocarbons by Sphingomonas paucimobilis.
Environ. Sci. Technol.
30:136-142[CrossRef].
|
Applied and Environmental Microbiology, August 2000, p. 3487-3491, Vol. 66, No. 8
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Bereschenko, L. A., Heilig, G. H. J., Nederlof, M. M., van Loosdrecht, M. C. M., Stams, A. J. M., Euverink, G. J. W.
(2008). Molecular Characterization of the Bacterial Communities in the Different Compartments of a Full-Scale Reverse-Osmosis Water Purification Plant. Appl. Environ. Microbiol.
74: 5297-5304
[Abstract]
[Full Text]
-
Johnsen, A. R., Schmidt, S., Hybholt, T. K., Henriksen, S., Jacobsen, C. S., Andersen, O.
(2007). Strong Impact on the Polycyclic Aromatic Hydrocarbon (PAH)-Degrading Community of a PAH-Polluted Soil but Marginal Effect on PAH Degradation when Priming with Bioremediated Soil Dominated by Mycobacteria. Appl. Environ. Microbiol.
73: 1474-1480
[Abstract]
[Full Text]
-
Cerca, N., Martins, S., Sillankorva, S., Jefferson, K. K., Pier, G. B., Oliveira, R., Azeredo, J.
(2005). Effects of Growth in the Presence of Subinhibitory Concentrations of Dicloxacillin on Staphylococcus epidermidis and Staphylococcus haemolyticus Biofilms. Appl. Environ. Microbiol.
71: 8677-8682
[Abstract]
[Full Text]
-
Venugopalan, V. P., Kuehn, M., Hausner, M., Springael, D., Wilderer, P. A., Wuertz, S.
(2005). Architecture of a Nascent Sphingomonas sp. Biofilm under Varied Hydrodynamic Conditions. Appl. Environ. Microbiol.
71: 2677-2686
[Abstract]
[Full Text]
-
Benson, M. J., Gawronski, J. D., Eveleigh, D. E., Benson, D. R.
(2004). Intracellular Symbionts and Other Bacteria Associated with Deer Ticks (Ixodes scapularis) from Nantucket and Wellfleet, Cape Cod, Massachusetts. Appl. Environ. Microbiol.
70: 616-620
[Abstract]
[Full Text]
-
Battin, T. J., Kaplan, L. A., Newbold, J. D., Cheng, X., Hansen, C.
(2003). Effects of Current Velocity on the Nascent Architecture of Stream Microbial Biofilms. Appl. Environ. Microbiol.
69: 5443-5452
[Abstract]
[Full Text]
-
Johnsen, A. R., Bendixen, K., Karlson, U.
(2002). Detection of Microbial Growth on Polycyclic Aromatic Hydrocarbons in Microtiter Plates by Using the Respiration Indicator WST-1. Appl. Environ. Microbiol.
68: 2683-2689
[Abstract]
[Full Text]
-
Neu, T. R., Swerhone, G. D. W., Lawrence, J. R.
(2001). Assessment of lectin-binding analysis for in situ detection of glycoconjugates in biofilm systems. Microbiology
147: 299-313
[Abstract]
[Full Text]