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Applied and Environmental Microbiology, June 2001, p. 2819-2822, Vol. 67, No. 6
Rowett Research Institute, Bucksburn,
Aberdeen AB21 9SB, United Kingdom
Received 17 November 2000/Accepted 9 March 2001
The origin of cell nitrogen and amino acid nitrogen during growth
of ruminal cellulolytic bacteria in different growth media was
investigated by using 15NH3. At high
concentrations of peptides (Trypticase, 10 g/liter) and amino acids
(15.5 g/liter), significant amounts of cell nitrogen of
Fibrobacter succinogenes BL2 (51%), Ruminococcus
flavefaciens 17 (43%), and Ruminococcus albus
SY3 (46%) were derived from non-NH3-N. With peptides at 1 g/liter, a mean of 80% of cell nitrogen was from NH3. More
cell nitrogen was formed from NH3 during growth on
cellobiose compared with growth on cellulose in all media. Phenylalanine was essential for F. succinogenes, and its
15N enrichment declined more than that of other amino acids
in all species when amino acids were added to the medium.
Knowledge of the nitrogen compounds
required for growth of ruminal bacteria is important in understanding
the protein nutrition of ruminants and factors affecting ruminal
fermentation, particularly fiber digestion. There is a long-held belief
that cellulolytic ruminal bacteria use NH3 as
their sole source of N. Some recently published results are not
consistent with this conclusion, however. Bryant (7), in
summarizing the nutrient requirements of ruminal bacteria, concluded
that cellulolytic bacteria used only NH3 as an N
source for growth. They were unable to grow on other nitrogen sources
in the absence of NH3 (9), and the
incorporation of preformed amino acids was minimal, based on the low
level of uptake of 14C-labeled amino acids found
with Fibrobacter succinogenes (3, 10, 11) and
Ruminococcus flavefaciens (2, 3, 10) and in
other studies with pure cultures of ruminal bacteria which had
indicated that disappearance of NH3-N from the
growth medium was equal to N incorporation into bacterial protein
(8). The uptake of 14C from labeled
amino acids was, however, significant in the early experiments of
Bryant and Robinson (10) and Allison et al. (2, 3), though less than that found with Escherichia coli
and noncellulolytic ruminal bacteria. The amino acid transport
experiments of Ling and Armstead (29) also indicated that
F. succinogenes accumulated radioactivity from
14C-labeled peptides and amino acids. The
stimulation of cellulolytic species by precursors of various amino
acids (1, 31, 36) also suggests a quantitative dependence
on amino acids for optimum growth. Furthermore, there is experimental
evidence that preformed amino acids stimulate microbial growth and
increase fiber digestion in vivo and in vitro (13, 15, 23,
30), and pure cellulolytic species grow faster on cellobiose
when peptides are added to the medium (16). In addition,
bacteria most closely associated with solids derived a substantial
proportion of their cell N from sources other than ammonia (13,
19, 28). All of these observations indicate that amino acids are
significant nutrients for cellulolytic bacteria. The present
experiments were therefore undertaken to determine the extent to which
preformed amino acids affect amino acid and cell N synthesis from
15NH3 in the three main
species of cellulolytic ruminal bacteria.
The main bacteria used in these studies were F. succinogenes
BL2 (NCFB 2576), Ruminococcus albus SY3 (37),
and R. flavefaciens 17 (21). Other strains are
held in the culture collection of the Rowett Research Institute. The
bacteria were maintained on the liquid form of medium M2
(24). 15N uptake experiments were
carried out with the basal medium of Hungate and Stack
(25) with either 0.6% (wt/vol) cellulose (Avicel pH 101;
Honeywill and Stein Ltd., London, United Kingdom) added before
autoclaving or 0.6% (wt/vol) cellobiose (Sigma, Poole, Dorset, United
Kingdom) added as a filter-sterilized solution after autoclaving and
with 0.05 mg of vitamins B1 and
B2 per ml. Part (40%) of the
NH4Cl in the minerals solution was replaced by
15NH4Cl (Sigma; 98%
15N). Peptides (Trypticase; Becton Dickinson
Microbiology Systems, Cockeysville, Md.) or amino acids
(4) were added at various concentrations before autoclaving.
Bacteria were inoculated (5% by volume) from stock cultures into
cellobiose-containing defined medium and incubated at 39°C for
24 h. These cultures were used to inoculate cellobiose- and cellulose-containing media. Cultures were analyzed once stationary phase was reached in the cellobiose cultures (24 to 48 h) or after 6 days of incubation for cellulose cultures. The bacteria were harvested by centrifugation (15,000 × g, 15 min),
pellets were washed once with ice-cold water, and then the resuspended
cells and supernatants were freeze-dried. 15N
enrichment was measured by isotope ratio mass spectrometry as described
by Barrie and Workman (6). Total cell N was measured by a
Kjeldahl procedure (17). Samples were processed and
analyzed for 15N enrichment in amino acids by gas
chromatography-mass spectrometry (GC-MS) of derivatized amino acids
(12) as described previously (4). Ammonia and
15N enrichment in ammonia were measured as
described by Whitehead et al. (39) and Nieto et al.
(32), respectively. Calculations were described previously
(4). Protein was hydrolyzed by using HCl, which results in
the breakdown of glutamine, asparagine, and tryptophan, and the GC-MS
method did not detect lysine or cysteine adequately. Thus, the
enrichment of these amino acids was not determined.
Results are all means derived from the analysis of triplicate cultures.
The data were compared by analysis of variance with different cultures
used as a blocking factor. To compare the effects of treatments on
ammonia uptake into amino acids, individual amino acids were considered
as a subplot within the design. All analysis was carried out with the
GENSTAT 5 statistical program (Lawes Agricultural Trust, Rothamsted
Experimental Station, Harpenden, Herts, England).
F. succinogenes did not grow on cellobiose without peptides
or amino acids (Table 1) but grew in the
cellulose-containing medium (Table 2).
The cellulose was impure, containing sufficient N to contribute 11 µg
of N per ml of medium, perhaps explaining the growth of F. succinogenes on cellulose. Also as a consequence, the proportion
of cell N derived from NH3 in the basal medium with no added amino acids was less than 100% (Table 2).
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.6.2819-2822.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Incorporation of [15N]Ammonia by the
Cellulolytic Ruminal Bacteria Fibrobacter succinogenes
BL2, Ruminococcus albus SY3, and Ruminococcus
flavefaciens 17
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TABLE 1.
Influence of Trypticase and amino acid addition on
incorporation of 15NH3 by three predominant
cellulolytic ruminal bacteria grown on
cellobiosea
TABLE 2.
Influence of Trypticase and amino acid addition on
incorporation of 15NH3 by three predominant
cellulolytic ruminal bacteria grown on cellulose
The growth of all species was stimulated by peptides or amino acids, except for R. albus on cellulose. Final NH3 concentrations indicated that NH3 did not limit growth. Net NH3 utilization occurred in all cultures, and the 15N enrichment in ammonia in the spent medium fell only slightly at high peptide concentrations, indicating that little breakdown of peptides and amino acids to NH3 had occurred. This growth stimulation occurred even though the higher and branched-chain volatile fatty acids found by Allison et al. (1) had been added to the medium. Several experiments with the mixed population carried out in vivo and in vitro appear to be consistent with cellulolytic bacteria being stimulated by peptides or amino acids. Providing preformed amino acids in addition to ammonia to mixed ruminal microorganisms resulted in stimulation of microbial growth and increased fiber digestion (13, 15, 23, 30). However, the benefit does not appear to be consistent, because no benefit of adding preformed amino acids on microbial growth or fiber digestion was found in other studies (16, 21, 26, 27).
In all three bacteria, the proportion of cell N derived from ammonia fell as the concentration of peptides increased in the medium. At the highest peptide concentration tested (10 g/liter), between 42 and 75% of the cell N and amino acid N was derived from NH3. The experiment was repeated in the 10-g/liter peptide-cellobiose medium with different strains of the bacteria used in Tables 1 and 2. The proportions of cell N derived from NH3 in F. succinogenes strains S85, Bac10, Bac12, Bac20, and SD35, R. albus strains 8 and J6, and R. flavefaciens strains FD1 and 007 were 0.45, 0.44, 0.53, 0.51, 0.52, 0.71, 0.45, 0.62, and 0.55 (standard error of the difference [SED], 0.04), respectively, similar to the results obtained with the strains used here.
At a lower peptide concentration, 1 g/liter, an average of 80% of the cell N was derived from ammonia (Tables 1 and 2). The average 15N enrichment in individual amino acids responded to additions to the medium in a way similar to that of cell N (Tables 1 and 2). The 1-g/liter concentration of peptides and amino acids is among the highest concentrations that would be found in the liquid phase of ruminal digesta in vivo (14, 38, 40). At ruminal peptide and NH3 concentrations, therefore, it might be expected that 80% or more of the cell N of cellulolytic bacteria would be derived from NH3, in comparison with lower proportions for noncellulolytic bacteria (4). Quantitatively, therefore, this conclusion differs little from the general conclusion made by Bryant (7) and incorporated into the CNCPS model (34). Yet, in the mixed population, Carro and Miller (13) and Komisarczuk et al. (28) found that only about half of the microbial amino acids most closely associated with fiber was derived from exogenous NH3. Incomplete equilibration of NH3 pools in the microenvironment of the consortium digesting plant tissue may have contributed to these findings. It is also possible that amino acid incorporation occurred predominantly in the secondary fiber digesters associated with the consortium. However, it is also possible that local peptide and amino acids concentrations in the fiber-associated microenvironment are much higher than in the rest of the digesta, leading to an extent of amino acid incorporation similar to that observed here at the higher peptide and amino acid concentrations.
The present study used 15NH3, which gives information different from that of earlier, 14C, studies (2, 3, 10). Amino acid N is subject to transformation by aminotransferase activity and by deamination followed by reincorporation by, for example, glutamate dehydrogenase activity (20), as well as direct incorporation of intact amino acid. The main factor which might lead to misleading calculated incorporation values is failure of bacterial intracellular NH3 pools to equilibrate with the measured extracellular pools, in which case amino acid N could be released intracellularly by deamination without the resultant NH3 equilibrating with the measured NH3 pool, which was extracellular. This would lead to a low estimate of cell N derived from NH3. Intracellular NH3 pools in ruminal bacteria are greater than extracellular NH3 concentrations, implying that an accumulation mechanism is present (33). It is not known how rapidly exchange between intra- and extracellular NH3 pools occurs. Even if equilibration is not complete, however, there is little doubt that the results are consistent with the conclusion that substantial incorporation of amino acid N can occur with the cellulolytic bacteria.
The amino acid treatment was included to compare the effects of isonitrogenous mixtures of peptides and amino acids as additions to the growth medium. A concentration of a complete amino acid mixture at 15.5 g/liter was compared with isonitrogenous peptides at 10 g/liter. Amino acids decreased NH3 incorporation into amino acids in all media more than peptides, suggesting that these bacteria have a preference for amino acids over peptides (Tables 1 and 2). The incorporation of amino acids, which dilutes the cell N derived from 15NH3, is therefore compatible with the early 14C incorporation data (2, 3, 10), the later amino acid transport experiments of Ling and Armstead (30), and incorporation experiments with fiber- associated mixed populations (13, 19, 28).
Among individual bacterial amino acids, all enrichments decreased as the concentration of peptides or amino acids in the medium increased (data not shown), roughly in line with cell N, with the exception of phenylalanine (Tables 1 and 2). Phenylalanine synthesis was insignificant in F. succinogenes, irrespective of peptide concentration, and was generally lower than that of the other amino acids in the ruminococci. The incorporation of 15N into all of the other amino acids measured responded in a much less abrupt way, apparently falling into two groups: Ala, Gly, Ser, Thr, Asp, Glu, and Tyr were generally more highly enriched than Val, Leu, Ile, and Pro (data not shown). Stimulation of growth by phenylalanine or its precursors, phenylacetic acid and phenylpropionic acid, and the implications for the competitiveness of Ruminococcus spp. have been well established (3, 31, 36). However, although there have been observations of a phenylalanine requirement (11) and incorporation of phenylacetic acid (3) in F. succinogenes, the response to added amino acids was surprising, because it was much more abrupt than that to any other amino acids with the cellulolytic bacteria examined here and the noncellulolytic species examined previously (4). Furthermore, unlike with the ruminococci, no growth occurred in the basal medium, which lacked phenylalanine or its precursors. F. succinogenes may therefore have an even greater requirement for phenylalanine than R. albus or R. flavefaciens. Tyrosine, which like phenylalanine is derived from prephenic acid (35), did not respond in the same way (data not shown), suggesting that prephenate dehydratase may be lacking in F. succinogenes, while prephenate dehydrogenase remains active. Allison (3) suggested that it may be more economical for microorganisms in the rumen to use phenylacetic acid in Phe synthesis than to synthesize the carbon skeleton from other sources, since phenylacetic acid would always be present as a precursor in ruminal digesta.
The sensitivity of proline to added amino acids was similar to that of the other amino acids (data not shown) and therefore was much less than that in noncellulolytic species (4) or in the mixed population (5). There was no indication that, with the exception of Phe in F. succinogenes, any single amino acid might be limiting the growth of cellulolytic ruminal bacteria significantly more than any other.
These results therefore indicate (i) that cellulolytic ruminal bacteria incorporate preformed amino acids, (ii) that preformed amino acids stimulate the growth of cellulolytic ruminal bacteria, (iii) that amino acids are preferred over peptides, and (iv) that phenylalanine biosynthesis may be a limiting factor in some species. While some of these conclusions might at first appear to conflict with accepted dogma, they are in fact fairly consistent with most published data and may help us to resolve some apparent contradictions which appear in the literature.
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ACKNOWLEDGMENTS |
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We thank M. G. Annand, A. G. Calder, and E. Milne for their skilled analysis and G. Horgan for statistical analysis.
This work was supported by the Scottish Executive Rural Affairs Department.
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FOOTNOTES |
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* Corresponding author. Mailing address: Rowett Research Institute, Bucksburn, Aberdeen AB21 9SB, United Kingdom. Phone: 44 1224 716656. Fax: 44 1224 716687. E-mail: RJW{at}RRI.SARI.AC.UK.
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