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Applied and Environmental Microbiology, September 2001, p. 4338-4341, Vol. 67, No. 9
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.9.4338-4341.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Physiological Characterization of
Pseudomonas putida DOT-T1E Tolerance to
p-Hydroxybenzoate
María-Isabel
Ramos-González,1
Patricia
Godoy,1
Miguel
Alaminos,1
Arie
Ben-Bassat,2 and
Juan-Luis
Ramos2,*
Department of Biochemistry and Molecular and
Cellular Biology of Plants, Estación Experimental del
Zaidín, Consejo Superior de Investigaciones
Científicas, E-18008 Granada,
Spain,1 and Central Research and
Development, DuPont de Nemours, Newark, Delaware
19714-61012
Received 26 February 2001/Accepted 4 June 2001
 |
ABSTRACT |
Pseudomonas putida DOT-T1E was isolated as a
toluene-tolerant strain. We show that it is also able to grow on high
concentrations (up to 17 g/liter [123 mM]) of
p-hydroxybenzoate (4HBA). Tolerance to this aromatic
carboxylic acid (up to 30 g/liter [217 mM]) is improved by
preexposing the cells to low 4HBA concentrations; the adaptation
process is caused by the substrate itself rather than by products
resulting from its metabolism. The mechanisms of 4HBA tolerance seem to
involve increased rigidity of the cell membrane as a result of a
decrease in the cis/trans ratio of unsaturated fatty
acids. In addition, energy-dependent efflux systems seem to operate in
the exclusion of 4HBA from the cell membranes.
 |
TEXT |
Bacteria tolerant to organic
solvents have been isolated from polluted and unpolluted environments
(2, 7, 14, 30, 35). These microorganisms are of interest
for the bioremediation of sites that are heavily polluted with these
compounds, for the biotransformation of low-solubility chemicals in
water, and for the construction of robust biosensor strains for the in
situ detection of pollutants (12, 13, 34). Most of the
bacteria that have been isolated so far as being tolerant to
p-xylene, styrene, and toluene belong to the fluorescent
group of Pseudomonas (2, 14, 30, 35). The
molecular basis for solvent tolerance involves changes in the lipid
composition of the membrane, including isomerization of cis
unsaturated fatty acids to trans, the biosynthesis of
saturated lipids versus unsaturated ones (11, 16, 19, 28, 31, 35), and a series of energy-dependent efflux pumps (3, 15, 18-20, 23, 24, 29, 31, 34).
Transformation of toluene into p-hydroxybenzoate (4HBA) is
of potential use to the chemical industry for the synthesis of parabens, liquid crystal polymers, and other polymers used in the
biosynthesis of plastics and other materials. This biotransformation can be achieved through the toluene mono-oxygenase pathway, in which
toluene is first oxidized to p-cresol and the lateral alkyl chain is successively oxidized to yield 4HBA (36). The
blockage of 4HBA hydroxylase by disruption of its gene
(pobA) allows the synthesis and accumulation of 4HBA from
toluene (5). However, this production system uses the
Pseudomonas mendocina KR1 strain and may be limited by the
toxicity of the solvent and product. This prompted us to analyze 4HBA
tolerance in the toluene-tolerant Pseudomonas putida strain
DOT-T1E, which thrives in the presence of supersaturating
concentrations of toluene (30). In the present study we
show that this strain exhibits a high level of tolerance to 4HBA,
withstanding concentrations of this hydroxylated aromatic acid up to 30 g/liter and growing at concentrations of 4HBA up to 17 g/liter. This is
about two- to threefold higher than the concentration that allows the
growth of P. mendocina KR1, a 4HBA-producing strain (A. Ben-Bassat, M. Cattermole, A. A. Gatenby, K. J. Gibson, M. I. Ramos-González, J. L. Ramos, and S. Sariaslani,
June 2000, patent application BC1018US NA) or strains able to use 4HBA
as the sole carbon source (i.e., Pseudomonas aeruginosa,
Acinetobacter sp., and Rhizobium sp.)
(4, 8, 26, 27).
The effect of the adaptive response on the tolerance to 4HBA in
P. putida DOT-T1E.
Tolerance was measured as the
ability of a culture to grow on double diffusion plates containing a
linear gradient of 4HBA. With this technique we observed that P. putida DOT-T1E tolerated 15 to 17 g of 4HBA/liter,
whereas P. mendocina tolerated about 8 to 10 g/liter on
glucose-supplemented M9 minimal medium (1) agar plates.
Tolerance was also tested in liquid medium. To this end P. putida DOT-T1E cells were grown on glucose-supplemented M9 minimal medium with and without 4HBA (5 g/liter) and then transferred to
culture media with increasing 4HBA concentrations (0 to 24 g/liter).
For glucose-grown cells, transfer to a medium with glucose and 4HBA at
0, 6, and 12 g/liter resulted in their immediate growth, with doubling
times of 85, 100, and 244 min, respectively (Fig. 1A). A higher concentration of 4HBA (18 g/liter) hampered cell growth (Fig. 1A) and eventually led to a
decrease in viable cells as determined by counting CFU per milliliter
in Luria-Bertani (LB) medium. After 24 h cells became
unrecoverable on LB agar plates (not shown). (LB medium was used for
counting because colonies of a reasonable size could be counted after
18 to 24 h of incubation at 30°C.)

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FIG. 1.
Effect of 4HBA on the growth of P. putida
DOT-T1E. (A) Glucose-supplemented M9 minimal medium was inoculated with
DOT-T1E and incubated overnight at 30°C with shaking. Thirty
milliliters of the same medium containing 0 ( ), 6 ( ), 12 ( ),
or 18 ( ) g of 4HBA/liter was inoculated with 0.3 ml of the overnight
culture. (B) Bacterial cells were pregrown with glucose (0.5%, wt/vol)
and 5 g of 4HBA/liter. Aliquots of this culture were used to
inoculate glucose-supplemented M9 minimal medium with 0 ( ), 6 ( ),
12 ( ), 18 ( ), 24 ( ), 30 ( ), or 36 ( ) g of
4HBA/liter. Cell growth was followed by counting CFU per milliliter on
LB agar plates supplemented with rifampin (10 µg/ml). Each experiment
was repeated at least three times. Results of a typical experiment from
a single culture are presented. Duplicate measurements of CFU in a
single experiment yielded an average standard deviation of 2 to 5%.
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P. putida DOT-T1E cells pregrown on 5 g/liter 4HBA tolerated
up to 24 g of 4HBA/liter (Fig.
1B), although the higher the
concentration
tested was, the longer the lag phase was before growth
resumed
(Fig.
1B). Higher 4HBA concentrations led to an initial
decrease
in cell viability, which was about 1 and 4 log units at
concentrations
of 4HBA of 30 and 36 g/liter, respectively, after
24 h of exposure,
although growth resumed afterwards (Fig.
1B). We
therefore suggest
that preexposure of DOT-T1E cells to 4HBA has a
beneficial effect
on the tolerance to high concentrations of this
compound.
The adaptive response of
P. putida DOT-T1E to 4HBA was
relatively fast: after as little as 1 to 2 h of incubation in the
presence
of 3 g of 4HBA/liter, cells were able to withstand an
18-g/liter
shock without inhibition of viability, in contrast to cells
that
had not been preadapted to this compound (not shown). If
4HBA-preadapted
cells are transferred to nonselective LB medium,
reexposure of
these cells to 4HBA results in growth inhibition (not
shown).
This supports the notion of the physiological adaptation of
P. putida DOT-T1E cells to high 4HBA concentrations, rather
than
the appearance of mutant cells exhibiting greater tolerance to
4HBA than the original wild-type
strain.
Metabolism of 4HBA in
P. putida DOT-T1E proceeds via
protocatechuate, which is further metabolized via the

-ketoadipate pathway
(
10). Other compounds such
as ferulic, vanillic, shikimic, and
quinic acids are also metabolized
through the

-ketoadipate pathway
(
10,
25).
P. putida DOT-T1E failed to use ferulic and vanillic
acid as carbon
sources, but 10 mM quinic and shikimic acids were
used as the sole
carbon sources for growth. To determine whether
4HBA tolerance was
promoted by itself or by a product resulting
from its metabolism, we
investigated the ability of quinate and
shikimate to induce tolerance
to a 4HBA shock.
P. putida DOT-T1E
cells pregrown on either
of these compounds as the sole C source
were subjected to 4HBA shocks,
and growth and viability were determined.
Quinate- and shikimate-grown
cells did not tolerate sudden shocks
with 18-g/liter 4HBA. These
results suggested that the response
to 4HBA was a consequence of 4HBA
itself and not of a product
resulting from its metabolism. A
P. putida DOT-T1E
pobA mutant
was constructed in our
laboratory (J. L. Ramos, A. Ben-Bassat,
P. Godoy, M. I. Ramos-González, and E. Duque, September 2000,
patent application
UBC1030US NA). This strain grows on protocatechuate
but not on 4HBA,
although it did grow in the presence of low 4HBA
concentrations with
glucose as the C source. We exposed protocatechuate-
and
glucose-4HBA-grown cells to an 18-g/liter 4HBA shock. We found
that the
pobA mutant strain tolerated a sudden 4HBA shock if
preexposed
to a low 4HBA concentration but not when grown on
protocatechuate.
These results further support the argument that 4HBA
per se, rather
than metabolites of its assimilation, acts as an inducer
of 4HBA
tolerance.
Does inhibition of 4HBA uptake via the main 4HBA transporter system
have a beneficial effect on 4HBA tolerance?
p-Hydroxybenzoic acid, an apolar molecule, can passively
diffuse into the cell, whereas the entry of charged polar 4HBA is an
active transport process mediated by the product of the
pcaK gene (9). In
Acinetobacter sp. all pca structural
genes are grouped within a single operon (21). In
P. putida the pcaK gene is part of the
pcaRKF cluster (9), but each gene is
transcribed monocistronically (M. Alaminos and J. L. Ramos,
unpublished results). The pcaRKF gene cluster of
P. putida DOT-T1E was recovered from a genome library of
the strain after colony screening hybridization with
pcaR as a probe. A knockout of the pcaK
gene was generated in vitro by inserting a cassette containing an
interposon that encoded kanamycin resistance. The mutant allele was
subcloned in pKNG101 (17) and used to create a
pcaK mutant via double homologous recombination, exactly
as described before, to obtain other mutants of P.
putida (22, 23, 32). The PcaK-deficient mutant did
not exhibit chemotaxis to 4HBA, and growth at alkaline pHs with 4HBA as
the sole carbon source was significantly retarded with respect to that
of the wild type (generation time was 88 and 69 min at pH 7.0 and 120 and 68 min at pH 8.1 for the mutant and the wild-type strain,
respectively), in accordance with previous findings in other P.
putida strains (9). We then tested 4HBA tolerance
of mutant cells on double diffusion plates with a 0- to 25-g/liter
linear gradient of this compound at pH 7.0 and pH 8.1. The results
obtained were similar to those obtained for the wild-type strain,
although the 4HBA tolerance of both strains was slightly enhanced at pH
8.1. It then follows that the PcaK transporter does not play a major
role in the 4HBA-adaptative tolerance to 4HBA.
Mechanisms of tolerance to 4HBA.
As mentioned above,
cis-to-trans isomerization of phospholipids and
extrusion of solvents are key players in toluene tolerance in a number
of P. putida strains. We have now tested changes in the
phospholipid composition in P. putida DOT-T1E grown with
glucose and with different 4HBA concentrations in the culture medium
(0, 3, 6, 12, and 15 g/liter). The higher the concentration of 4HBA was, the greater the changes in fatty acid composition were. The most
significant changes were (i) the transformation of
9-cis-hexadecenoic acid (C16:1,9
cis) to the corresponding trans isomer
instead of it being channeled to render cis-9,10-methylene
hexadecanoic acid (C17:cyclopropane)
(6) and (ii) isomerization of cis-vaccenic acid
(C18:1,11 cis) to the trans
isomer (Table 1). As a result, the
cis/trans and saturated/unsaturated fatty acid ratios
decreased (Table 1). These results suggest that the cell membranes
become more rigid in response to this toxic compound in the culture
medium.
We analyzed the role of
cis-to-
trans
isomerization on 4HBA tolerance with the DOT-T1E
cti-lacking derivative, which was unable
to carry out
the
cis-to-
trans isomerization (
16).
This mutant
was more sensitive to toluene than the wild type at
temperatures
above 37°C; however, its resistance to toluene was
comparable
to the wild type's at 30°C (
16). The
cti mutant tolerated the
same amount of 4HBA as the wild
type on double diffusion plates
with a 0- to 25-g/liter linear gradient
of this compound at 30
and 37°C. This finding is not surprising
because the
cis-to-
trans isomerization is
considered a short-term defense mechanism (minutes
after exposure to
the offensive agent), and 4HBA's negative effect
required a long
exposure to the compound as shown in Fig.
1. We,
therefore, suggest
that the
cis-to-
trans isomerization of
phospholipid
fatty acids is part of a general unspecific defense
mechanism
that operates in response to 4HBA, as it is also the case
with
other organic compounds (
6,
11,
16,
34) and heavy
metals
(P. Godoy and J. L. Ramos, unpublished
data).
We also tested whether an exclusion system for 4HBA was operative in
P. putida DOT-T1E. To prevent the metabolism of 4HBA
we used
DOT-T1E mutants which do not utilize 4HBA as the sole
carbon source,
namely, the DOT-T1E
pobA mutant and DOT-T1E PhoA5.
The
former is a mutant with a knocked-out
pobA gene (J. L. Ramos
et al., patent application), and the latter is a mutant that
carries
a mini-Tn
5-
phoA transposon in the
exbD gene, which forms part
of the
exbBD tonB
operon (J. L. Ramos et al., patent application).
We showed before
that neither the
exbD mutant nor the
pobA mutant
metabolize 4HBA, although they grow on protocatechuate as the
sole C
source. We studied the accumulation of
[
14C]4HBA by these cells in the mid-log growth
phase in M9 minimal
medium with glucose plus 5 mM 4HBA. The
accumulation of radioactivity
was assumed to be due to the persistence
of [
14C]4HBA in the membranes since 4HBA was
not assimilated by the
mutant cells. The PhoA-5 mutant cells
accumulated up to 75,000
cpm of label per unit of cell density
at 660 nm during the first
45 min and then reached a plateau of around
100,000 cpm per unit
of cell density at 660 nm (Fig.
2). In contrast, in the
DOT-T1E-
pobA mutant,
14C accumulation
was negligible in the short term and reached a
maximum of 10% with
respect to the level found in the PhoA-5 strain
after 19 h (Fig.
2). In double diffusion plates with a 4HBA gradient,
the
DOT-T1E-
pobA mutant tolerated concentrations of this
aromatic
carboxylic acid as high as those tolerated by the wild type
(15
to 17 g/liter), whereas the DOT-T1E PhoA5 mutant did not tolerate
concentrations higher than 6 g of 4HBA/liter. We suggest that
a
putative efflux system for 4HBA may be active in the PobA mutant
and
inactive in the
exbD mutant.

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FIG. 2.
Accumulation of [14C]4HBA in P.
putida cells. Strains used were the DOT-T1E
pobA-lacking derivative ( ) or DOT-T1E PhoA5 ( ).
Mid-log-phase cells grown on 0.5% (wt/vol) glucose and 5 mM
4HBA-supplemented M9 minimal medium were washed in M9 buffer and
concentrated in 2 ml of 0.3% (wt/vol) glucose-supplemented M9 minimal
medium at a final turbidity of 2.5 at 660 nm. The cells were incubated
for 10 min at 30°C under shaking. One and a half microcuries of
[14C]4HBA (specific activity, 11.5 mCi/mmol) was added to
the cells in 2 ml of the same medium. Aliquots of 400 µl were
filtered through a Millipore type HA 0.45-µm-pore size filter at the
indicated times. The membranes were washed with 5 mM 4HBA-supplemented
M9 buffer. The counts per minute was measured with a scintillation
counter (Packard Radiometer). The assays were performed at 30°C with
shaking. Each experiment was repeated at least twice. Results of a
typical experiment from a single culture are presented.
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Toluene in
P. putida DOT-T1E involves three efflux pumps,
called TtgABC, TtgDEF, and TtgGHI (
33). Mutants in the
TtgABC
and TtgGHI pumps are hypersensitive to toluene. Mutants in the
TtgABC and TtgDEF efflux pumps are slightly more sensitive to
4HBA than
the wild type and than a mutant in the TtgGHI efflux
pump, and this
effect was more evident at pH 8.1. The wild type
and the mutant TtgGHI
tolerated 4HBA up to 17 g/liter, whereas
the mutants in the TtgABC and
TtgDEF efflux pumps tolerated only
up to 12 to 13 g/liter. Although the
two above-mentioned efflux
pumps may be involved in 4HBA extrusion,
other extrusion systems
may also remove 4HBA from the cell membranes.
However, conclusive
evidence that other efflux pumps extrude 4HBA
requires that strains
bearing mutations in the genes that encode for
other proteins
involved in the removal of 4HBA be
isolated.
 |
ACKNOWLEDGMENTS |
This study was supported by a grant from DuPont de Nemours.
We thank M. J. Campos for technical assistance and Karen Shashok
and Carmen Lorente for checking the use of English in the manuscript.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Estación
Experimental del Zaidín, C/Prof. Albareda 1, E-18008 Granada,
Spain. Phone: 34-958-121011. Fax: 34-958-129600. E-mail:
jlramos{at}eez.csic.es.
 |
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Applied and Environmental Microbiology, September 2001, p. 4338-4341, Vol. 67, No. 9
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.9.4338-4341.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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