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Applied and Environmental Microbiology, September 2001, p. 4353-4357, Vol. 67, No. 9
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.9.4353-4357.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Anaerobic Mineralization of Stable-Isotope-Labeled
2-Methylnaphthalene
Elise R.
Sullivan,1,
Xiaoming
Zhang,1
Craig
Phelps,1 and
L. Y.
Young1,2,*
Biotechnology Center for Agriculture and the
Environment1 and Department of
Environment Sciences,2 Cook College,
Rutgers, the State University of New Jersey, New Brunswick, New Jersey
08901
Received 5 April 2001/Accepted 27 June 2001
 |
ABSTRACT |
An active sulfate-reducing consortium that degrades
2-methylnaphthalene (2-MNAP) at rates of up to 25 µM
day
1 was established. Degradation was inhibited in the
presence of molybdate and ceased in the absence of sulfate. As much as
87% of 2-[14C]MNAP was mineralized to
14CO2. 2-Naphthoic acid (2-NA) was detected as
a metabolite, and incubation with either deuterated 2-MNAP or
[13C]bicarbonate indicates that 2-NA is the result of
oxidation of the methyl group. Also detected were carboxylated 2-MNAPs,
suggesting the presence of an alternative pathway for 2-MNAP degradation.
 |
TEXT |
Recently, many investigators have
reported anaerobic biodegradation of polycyclic aromatic hydrocarbons
(PAHs) (1-6, 8-10, 12, 14, 15, 17). Most of these
studies focused on utilization of naphthalene (NAP) and other
nonsubstituted PAHs. Nonetheless, substituted PAHs, such as alkyl PAHs,
are major components of PAHs in the environment (7, 11).
Among 19 PAHs detected in the sediments of the Passaic River and
Newark Bay estuary in the New York-New Jersey harbor,
2-methylnaphthalene (2-MNAP) was the second most hazardous compound
(7).
Early on, our laboratory described active sulfidogenic consortia from
the Arthur Kill estuary in the New York-New Jersey harbor that are
capable of mineralizing NAP and phenanthrene (PHE) (17). The proposed biochemical pathway for NAP degradation involved an
initial carboxylation step to 2-naphthoic acid (2-NA)
(17). 2-NA was then sequentially reduced starting at the
unsubstituted ring through a series of five hydrogenation reactions
(10, 18). Recently, Annweiler et al. (1)
proposed a pathway for degradation of 2-MNAP. The upper portion of the
pathway is analogous to toluene degradation, whereby fumarate is added
to the methyl group and then subsequently oxidized to 2-NA
(1). The proposed lower portion of the pathway proceeds
from 2-NA through the same sequential reduction steps as shown for NAP
degradation, although the origin of these metabolites was not
confirmed. We describe here a stable consortium capable of mineralizing
2-MNAP under sulfidogenic conditions. Evidence is presented that
confirms the origin of the lower pathway metabolites and verifies the
oxidation of the methyl substituent using stable-isotope-labeled
substrates. Detection of 2-NA and other, more reduced intermediates
confirms that the proposed lower pathway is commonly used by bacteria
for degradation of 2-MNAP. We also detected the previously unreported
presence of other carboxylated 2-MNAPs during degradation of this
substrate, which indicates the existence of an alternative pathway.
Initial degradation.
Sediment used as inoculum for this study
was collected from the Arthur Kill, in the New York-New Jersey harbor
estuary system. Enrichment cultures were established in basic mineral
medium with 20 mM sulfate and 10% sediment using a strict anaerobic
technique. Routine detection of 2-MNAP was done by gas chromatography
(GC) with flame ionization detection as previously described
(17). The enrichments initially showed no significant loss
of substrate during the first 2 months of incubation, but in the third
month 140 µM 2-MNAP was completely utilized. In contrast, other
sulfate-reducing enrichments set up at the same time on NAP and
PHE took 5 months for complete degradation (17).
Upon refeeding, 2-MNAP (120 to 140 µM) was metabolized in 5 to
11 days without a lag, and no loss of substrate was observed in sterile
controls. The metabolic activity has been successfully maintained for
over 3 years by propagating the consortium as previously described
(17).
Mineralization of 2-MNAP.
Complete substrate mineralization to
CO2 was confirmed using 2-[14C]MNAP (labeled
in the 8 position; Sigma Chemical Co., St. Louis, Mo.). Triplicate
bottles of acclimated consortia (30 ml of culture) were amended
with 0.12 µM 2-[14C]MNAP (dissolved in 4 µl of
methanol; 62,263 total dpm) and 150 µM unlabeled 2-MNAP. Parallel
cultures were set up with only unlabeled 2-MNAP and monitored by
high-pressure liquid chromatography until the substrate
decreased to less than 0.5 µM (24 days). After 24 days,
14CO2 was measured as previously described in
detail (17). The 14CO2 produced
(53,893 dpm) accounted for 86.6% of total radioactivity. The remaining
radioactivity left in the slurry cultures was 6.8% (4,239 dpm), which
yielded a total recovery of 93.4% with a standard deviation of less
than 2%.
Dependence of 2-MNAP degradation on sulfate reduction.
To
confirm the dependence of 2-MNAP degradation on sulfate reduction,
substrate loss was monitored in cultures grown in the presence or
absence of sulfate (Fig. 1). To remove
sulfate, cultures were anaerobically washed three times with
sulfate-free media, and the sulfate concentration was confirmed in all
bottles by ion chromatography as described previously
(13). Complete loss of 2-MNAP occurred in cultures with 20 mM sulfate in 4 days but did not occur in cultures without
sulfate or in sterile controls. To further confirm the
dependence of 2-MNAP degradation on sulfate reduction, molybdate (20 mM), a specific inhibitor for dissimilatory sulfate reduction, was
added to active cultures. 2-MNAP was not utilized in the cultures
supplemented with molybdate after 16 days of incubation, whereas the
substrate was utilized in the cultures without molybdate within 5 days
(data not shown). These results indicate that 2-MNAP metabolism is
coupled to dissimilatory sulfate reduction, though it remains unclear
at this time whether the sulfate reducers are directly or
indirectly responsible for the 2-MNAP utilization.

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FIG. 1.
Effect of sulfate on utilization of 2-MNAP by the
2-MNAP-acclimated consortium. The autoclaved control is also shown.
Data points are the means of duplicate cultures, and the standard
deviations are shown.
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Substrate specificity.
Utilization of other substrates (100 to
150 µM) by the acclimated 2-MNAP consortium was also tested. A series
of cultures (30 ml each) was prepared from the active 2-MNAP-degrading
enrichment, and loss of substrate was monitored by high-pressure liquid
chromatography with UV detection at 280 nm as previously described
(17). It is interesting to note that NAP can be readily
utilized without a lag by the 2-MNAP-acclimated consortium (Fig.
2A), and conversely, the NAP consortium
(17) is capable of readily degrading 2-MNAP as substrate
(data not shown). 2-NA was utilized at a similar rate as was 2-MNAP,
while 2-naphthalenemethanol (2-NAPmethanol) degradation was slower
(Fig. 2B). Both 2-naphthol and 6-hydroxy-2-NA were utilized after a
short lag period. Compounds which were not utilized by the 2-MNAP
consortium after a 2-month incubation included 1-naphthol,
1-NA, benzene, toluene, biphenyl, PHE, and pyrene (data not shown).

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FIG. 2.
Utilization of substrate by the enriched consortia. (A)
Degradation of NAP by consortia that were originally enriched on either
2-MNAP (2-MNAP/Active) or NAP (NAP/Active). The autoclaved control is
shown (NAP/Autocl.). (B) Degradation of other compounds by the
2-MNAP-degrading consortium. The y scale (Ct/Co) represents
the normalized concentration of the tested compound and is calculated
by dividing the final concentration of substrate by the initial
concentration (~100 µM). Data points are the means of duplicate
cultures, and the standard deviations are shown. Note that the
x scale (incubation times) differs between graphs A and B.
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Metabolites detected during degradation of 2-MNAP.
Metabolites
produced during growth on 2-MNAP were extracted and detected using
GC-mass spectrometry as previously described (17, 18).
Identification of 2-NA as a metabolite was based on comparison of both
its GC retention time and mass spectra to those of a 2-NA standard. The
GC retention times for the standard and the 2-NA metabolite are the
same (21.21 min) and are notably different from that of the 1-NA
standard (20.62 min.). Furthermore, the mass spectra of
trimethylsilyl-derivatized 2-NA standard (Fig. 3A) and 2-NA detected in
the consortium (Fig. 3B) are identical, which confirms that 2-NA is the metabolite in the culture. Other, more
reduced intermediates from later in the pathway were also detected,
including dihydro-2-NA, 5,6,7,8-tetrahydro-2-NA, hexahydro-2-NA, and
octahydro-2-NA (data not shown). The presence of these
intermediates confirms that, once 2-MNAP is converted to 2-NA, it
is further degraded by the same pathway proposed for NAP (10,
18).

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FIG. 3.
The mass spectra of trimethylsilyl derivatives of
standard 2-NA (A) and 2-NA metabolite detected in the 2-MNAP-degrading
cultures supplemented with nondeuterated 2-MNAP (B), deuterated 2-MNAP
(D10) (C), and nondeuterated 2-MNAP plus [13C]bicarbonate
(D).
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Deuterated 2-MNAP (D10) and [
13C]bicarbonate (both
from Cambridge Isotope Laboratories Inc., Andover, Mass.) were
used to trace
the flow of carbon from the substrate
through intermediates. For
the [
13C]bicarbonate
experiments, detailed experiment procedures were
similar to those
described previously (
17) with the following
modifications. The final concentration of either
[
13C]bicarbonate or [
12C]bicarbonate was 25 mM, and 12.5 mM HCl was added to neutralize
the alkalinity caused by
the addition of bicarbonate. Entire cultures
were extracted for GC-mass
spectrometry analysis when 2-MNAP was
reduced to 25% of the initial
concentration in the active cultures.
When deuterated 2-MNAP was used
as the substrate, the detected
intermediate had a retention time of
21.12 min., almost identical
to that of the 2-NA standard. Up to a 6.8 µM level (6.8%) of the
added deuterated 2-MNAP (100 µM)
accumulated as deuterated 2-NA.
The mass spectrum pattern (Fig.
3C) is
quite similar to that of
the 2-NA standard, except that five major ions
(251, 236, 192,
162, and 134) were 7 mass units greater than the ions
in the 2-NA
standard (Fig.
3A). This mass unit increase confirms that
the
2-NA metabolite originated from the labeled 2-MNAP substrate.
The
7-mass-unit increase from the D10-labeled 2-MNAP can be explained
by
the loss of three deuterium atoms from the methyl group
(-CD
3 to -COOH) but no loss of the seven deuterium
atoms on the ring.
Hence, 2-NA is the result of the oxidation of the
methyl group
of 2-MNAP, and the methyl group carbon remains with the
bicyclic
moiety.
When [
13C]bicarbonate is added to the culture, no label
is incorporated into the 2-NA metabolite (Fig.
3D compared to the
standard
in Fig.
3A). The [
13C]bicarbonate data
establishes that 2-NA is not derived from carboxylation
of 2-MNAP, as
was previously shown for NAP (
10,
17,
18).
In a number of
experiments, we looked for the upper pathway of
2-MNAP degradation via
the addition of fumarate as was previously
reported (
1),
but no analogues with a molecular weight matching
that of a fumarate
addition product to 2-MNAP were found. Recognizing
that absence of data
is not proof, this does not exclude the possibility
that the fumarate
addition mechanism may occur in the initial
steps.
Besides 2-NA, three previously unreported carboxylated 2-MNAPs were
also detected in the 2-MNAP-amended consortium. Their
identification
was based on their distinct GC retention times,
molecular ion 258, and
mass spectrum (Fig.
4). The position of
the carboxyl group on the methylnaphthalene moiety is unknown
because
corresponding standards were not available. The concentrations
of the
carboxylated 2-MNAPs were at times as much as that detected
for the
2-NA metabolite and were not detected in the sterile control.
Also
detected were the dihydromethyl-2-NA, tetrahydromethyl-2-NA,
and
hexahydromethyl-2-NA intermediates (data not shown), providing
further
support for the existence of this novel pathway based
on the fact that
multiple intermediates were detected. When deuterated
2-MNAP (D10) was
added to the cultures, the deuterated form (with
molecular ion 267) was
also detected (data not shown). When [
13C]bicarbonate was
added, the carboxylated methylnaphthalene intermediates
increased by 1 mass unit (molecular ion 259), indicating that
the carboxyl group of
the compounds was indeed derived from [
13C]bicarbonate
(data not shown).

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FIG. 4.
Mass spectrum of trimethylsilyl derivatives of the
carboxylated 2-MNAP detected in the 2-MNAP-degrading cultures
supplemented with 2-MNAP. The molecular ion 258 equals the sum of 142 (2-MNAP), 44 (CO2), and 72 (trimethylsily group). Three GC
peaks showed similar mass spectra, and one of them is shown here.
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Conclusion.
As summarized in Fig.
5, we have enriched an active consortium
that degrades 2-MNAP through 2-NA as a central intermediate and then
proceeds via a series of sequential ring reductions before being
mineralized to CO2. The presence of these intermediates confirms that degradation by this pathway is conserved in nature, as it
has also been previously reported as part of the NAP degradation pathway (10, 18) and as the lower pathway of another
2-MNAP-degrading consortium (1). The use of
stable-isotope-labeled substrates confirmed that the detected
intermediates were derived from 2-MNAP and that the methyl group is
oxidized to 2-NA. Also detected were carboxylated 2-MNAPs and their
corresponding reduced metabolites, although the position of the
carboxyl group and the double bonds remain unknown due to the lack of
standards. The presence of these carboxylated 2-MNAPs and their reduced
derivatives suggests that an alternative pathway exists for 2-MNAP
degradation.

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FIG. 5.
Proposed pathway for anaerobic biodegradation of 2-MNAP
under sulfate-reducing conditions. (Left) Major pathway for 2-MNAP
degradation. (Right) Degradation pathway for the carboxylated 2-MNAPs.
Detected intermediates which are bracketed have no available standard
and thus were deduced based on the mass spectra; the positions of both
the double bonds and the carboxyl group are unknown.
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ACKNOWLEDGMENTS |
We thank Beau Ranheim and the crew of the Osprey,
NYC-DEP, for helping us collect Arthur Kill sediment and Carmela
Palermo for technical support.
This research was funded in part by grants from DARPA
(N0001492J1888), ONR (N00149311008), and NSF (9810248).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Biotechnology
Center for Agriculture and the Environment, 59 Dudley Rd., Foran Hall, Cook College, Rutgers, the State University of New Jersey, New Brunswick, NJ 08901-8520. Phone: (732) 932-8165, ext. 312. Fax: (732)
932-0312. E-mail: lyoung{at}aesop.rutgers.edu.
Present address: Department of Microbiology, University of New
Hampshire, Durham, NH 03824-2617.
 |
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Applied and Environmental Microbiology, September 2001, p. 4353-4357, Vol. 67, No. 9
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.9.4353-4357.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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