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Applied and Environmental Microbiology, November 2002, p. 5288-5295, Vol. 68, No. 11
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.11.5288-5295.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
School of Life Sciences, The Robert Gordon University, St. Andrew Street, Aberdeen AB25 1HG,1 Department of Molecular and Cell Biology, University of Aberdeen, Foresterhill, Aberdeen AB25 2ZD, United Kingdom2
Received 24 May 2002/ Accepted 15 August 2002
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The toxicity of microcystins is mediated through inhibition of serine-threonine protein phosphatases 1 and 2A (23), which can cause both acute and chronic effects in mammals. Intoxication with high levels of microcystins can lead to hepatocyte necrosis and hemorrhage, with severe cases resulting in death (2). Long-term exposure to low concentrations of microcystins has also been implicated in tumor promotion (13). The contamination of water with microcystins has been linked to fatalities of livestock and wildlife throughout the world (4). Episodes of human poisoning have also been reported, including the deaths of over 50 patients at a hemodialysis clinic in Caruaru, Brazil, which were attributed to the presence of microcystins in the clinic's water supply (33). Guideline values for drinking water were recently introduced by the World Health Organization (39), with a recommended limit of 1 µg of microcystin-LR equivalents per liter. There is therefore a need for sensitive and robust detection methods for determining the levels of microcystins in water.
Microcystins are routinely monitored using analytical techniques such as high-performance liquid chromatography (HPLC) and mass spectrometry (19, 20), but these can be slow and technically demanding and often require extensive sample processing prior to analysis. A promising alternative for microcystin detection is the use of immunological assays employing either polyclonal (6, 28) or monoclonal (32) antibodies. The enzyme-linked immunosorbent assay (ELISA) is quick to perform, inexpensive, requires minimum sample processing, and is capable of detecting microcystins within the levels set by the World Health Organization. In addition to their application in immunoassay formats, microcystin-specific antibodies are also useful tools for processing complex samples prior to toxin analysis. They have been used effectively in immunoaffinity chromatography to eliminate contaminants from biological samples (15) and to remove coeluting compounds when microcystins are concentrated from large water samples (16, 18), thus enabling identification of the toxins by HPLC.
ELISA formats have been used extensively in the detection of microcystins (6, 28, 32), and a number of diagnostic kits are now commercially available. However, application of these assays in routine monitoring programs has been restricted due to the difficulties in isolating reliable polyclonal antibodies from laboratory animals and the complexity and expense of producing monoclonal antibodies from hybridoma cell lines. Recombinant antibody technology provides a simpler and more cost-effective alternative for the isolation of microcystin-specific antibodies. Phage display technology (25) has facilitated the selection and enrichment of recombinant antibody fragments against a range of environmental haptens, including microcystins, from large antibody libraries (26). Antibody fragments selected against particular antigens can then be expressed in the bacterial host Escherichia coli in considerably larger amounts than whole antibodies produced by traditional methods. While representing <20% of the size of an intact antibody, fragments consisting of linked antibody heavy- and light-chain variable domains (scFv) have been shown to retain specificity and sensitivity for the target antigen (35). Furthermore, scFv fragments can be modified to increase their stability under nonphysiological conditions, including methanol (7, 35), which is used routinely to extract microcystins from cyanobacterial samples.
Here, we describe the isolation of recombinant phage-antibody clones against microcystin-LR from a naïve human semisynthetic phage display library. Selected phage antibodies were expressed as soluble single-chain antibody fragments (scAbs) and characterized by competition ELISA. The cross-reactivity of the most sensitive scAb clone was determined by ELISA of related toxins, and the detection and quantification of microcystins in cyanobacterial extracts was assessed by comparison with HPLC analysis. When immobilized, the scAb was capable of concentrating trace levels of microcystin-LR from large volumes of water prior to HPLC analysis, allowing the toxin to be identified and quantified.
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Microcystin-LR was conjugated to both bovine serum albumin (BSA) and keyhole limpet hemocyanin (KLH) according to published protocols (28). The methyldehydroalanine residue of the toxin was first linked to 2-mercaptoethylamine (Sigma Chemical Company, Poole, United Kingdom) (31) prior to the performance of a one-step gluteraldehyde coupling to a carrier protein (11). The microcystin-LR conjugates were analyzed for protein by the Bradford assay (3). Matrix-assisted laser desorption mass spectrometry was used to determine the hapten load per carrier protein for the microcystin-LR-BSA conjugate. This was found to be between 8 and 10 haptens per BSA molecule (26).
Plasmids and bacterial strains.
The Griffin.1 library (Medical Research Council, Cambridge, United Kingdom) is a human-based VH and VL scFv phagemid library constructed from synthetic V gene segments containing approximately 6.5 x 1010 different phage antibodies (10).
Antibody fragment expressions were carried out using the dicistronic expression vector pIMS147. This vector is modified from pHELP1 and is inducible through IPTG (isopropyl-ß-D-thiogalactopyranoside) (12). A human C
domain is situated immediately downstream of the scFv genes. This domain allows immunodetection and quantification of the expressed soluble polypeptide (called a scAb). The inclusion of a hexahistidine tag permits the purification of the scAb by immobilized metal ion chelate affinity chromatography (30). Vectors were transformed and subsequently expressed in E. coli strain XL-1 Blue {supE44 hsdR17 recA1 endA1 gyrA96 thi-1 relA1 lacF' [proAB+ lacIqZ
M15 Tn10 (Tetr)]} (Stratagene).
Affinity selection of anti-microcystin-LR phage antibodies.
Griffin.1 library glycerol stock (100 µl) was inoculated into 50 ml of 2x TY broth (34) containing 1% glucose and 100 µg of ampicillin ml-1 and incubated with shaking at 37°C to an optical density at 600 nm of 0.5 (1 to 2 h). M13 KO7 helper phage (Pharmacia) (1.4 x 1011 PFU) were added to the 50-ml culture and incubated without shaking at 37°C for 30 min. The infected culture was centrifuged, and the resulting pellet was resuspended in 500 ml of 2x TY broth containing 100 µg of ampicillin ml-1 and 25 µg of kanamycin ml-1 and incubated overnight at 30°C. Phage-antibody particles were concentrated from the culture supernatant following centrifugation by precipitation with 100 ml of polyethylene glycol in 2.5 M NaCl (20% [wt/vol]) (10).
Phage-antibodies rescued from the library were panned against a 75- by 12-mm immunotube (Griener Labortechnik, Gloucestershire, United Kingdom) coated with microcystin-LR-BSA (100 µg ml-1) in phosphate-buffered saline (PBS) as previously described (26). A total of five rounds of panning were carried out under the following conditions. In pan 2, microcystin-LR-KLH conjugate (100 µg ml-1) was used to coat the immunotube, while for pans 3 to 5, microcystin-LR-BSA (10 µg ml-1) was used. In pans 1, 2, and 3, bound phage were eluted from the immunotube using 100 mM triethylamine (24). The phage were eluted in pans 4 and 5 by incubation with constant turning for 1 h at room temperature with 2 ml of microcystin-LR dissolved in PBS. The concentrations of microcystin-LR used in these elutions were 1 µM in pan 4 and 1 nM in pan 5.
Selection and screening of phage antibodies.
ELISA was employed to determine the binding of phage precipitated from each round of panning to microcystin-LR-BSA, microcystin-LR-KLH, and the carrier proteins BSA and KLH alone.
Flat-bottom 96-well Immunolon 4 microtiter plates (Dynex, Sussex, United Kingdom) were coated with 100 µl of either of the conjugates or carrier proteins (10 µg ml-1) at 37°C for 1 h, followed by three washes with PBS. The plates were blocked for 2 h at 37°C with 200 µl of 2% Marvel-PBS (MPBS) per well and washed three times with PBS. Phage precipitated from each round of panning were added to the wells in 2% MPBS, and the plates were incubated for 1 h at room temperature. The plates were washed three times with PBS containing 0.1% Tween 20 (PBST; Sigma) and rinsed three times with PBS prior to the addition of 100 µl of anti-M13-peroxidase conjugate (Pharmacia Biotech, Uppsala, Sweden) per well diluted 1/1,000. The plates were incubated at room temperature for 1 h, washed three times with PBST, and developed by addition of 100 µl of tetramethylbenzidine dihydrochloride solution (KPL Laboratories, Gaithersburg, Md.) to each well. The reaction was stopped with 50 µl of 1 M H2SO4 per well, and the optical density was read at 450 nm using a microtiter plate reader.
Individual colonies from pans 3 to 5 were grown with shaking at 37°C in 100 µl of 2x TY broth containing 1% glucose and 100 µg of ampicillin ml-1 in 96-well plates (Greiner) to an optical density at 600 nm of 0.5. The phage-antibody particles were rescued by infecting each well with 25 µl of M13 KO7 (109 PFU) and incubating the plates for 30 min standing followed by 1 h with shaking at 37°C. The plates were centrifuged for 10 min at 1,800 x g, and the pellets were resuspended in 200 µl of 2x TY broth containing 100 µg of ampicillin ml-1 and 25 µg of kanamycin ml-1 followed by incubation overnight at 30°C. The binding of individual phage supernatants to microcystin-LR-BSA and microcystin-LR-KLH and to BSA and KLH alone was determined by ELISA.
Phage-antibody clones found to bind to the microcystin-LR conjugates but not to BSA or KLH alone were then assessed for the ability to recognize free microcystin-LR by competition ELISA. This was carried out using the same method described above except that 50 µl of each phage supernatant was added to coated and blocked ELISA plate wells with 50 µl of 4% MPBS containing 1 µM microcystin-LR.
Antibody VH and VL genes from selected phage clones were amplified by PCR using scFv-specific primers. Fingerprinting of PCR products was achieved by carrying out two separate restriction digests of the PCR products. The heavy chains were digested with BstNI (New England Biolabs, Hitchen, Hertfordshire, United Kingdom), and the light chains were digested with HaeIII (Roche Diagnostics, Mannheim, Germany). The digests were run out on a 3% agarose gel, and clones showing different banding patterns for the heavy- and light-chain genes were selected for cloning, sequencing, and expression. These clones were digested with NcoI and NotI (Roche), and the scFv genes were cloned into the expression vector pIMS147, which had undergone similar digestion. E. coli XL-1 Blue cells were transformed with the resulting ligated product by electroporation.
Sequencing of the VH and VL genes from selected clones was carried out in both directions, using the appropriate primers, on an ABI 377 automated DNA sequencer (PE Applied Biosystems, Foster City, Calif.).
Expression, purification, and characterization of bacterial scAbs.
Expressions of scAbs in transformed E. coli XL-1 Blue clones were carried out in Terrific Broth (37), as described previously (26).
The expressed scAbs were purified via the hexahistidine tail by Ni2+ charged immobilized metal ion chelate affinity chromatography (30), using Fast Flow Sepharose (Pharmacia). The purified scAbs were dialyzed against PBS and stored at -20°C. Antibody fragment concentration was quantified by capture ELISA of the human C
domain (27).
Each of the expressed scAb clones was characterized for binding to free microcystin-LR by using indirect competition ELISA. Microtiter plates were coated with microcystin-LR-BSA, washed, and blocked as before. Equal volumes of a subsaturating concentration of each scAb (1 nM) and serial doubling dilutions of microcystin-LR in sterile PBS were incubated for 1 h at 4°C in 1.5-ml Eppendorf tubes. Control tubes were prepared in which scAb was mixed with sterile PBS. Following incubation, 100 µl of each solution was added to triplicate microtiter wells, and the plates were incubated at room temperature for 1 h. The plates were washed three times with PBST before 100 µl of a 1/1,000 dilution of goat anti-human kappa light chain (bound and free)-peroxidase conjugate (Sigma) per well was added and incubated at room temperature for 1 h. The plates were washed, developed, and read as described above.
Cross-reactivity of anti-microcystin-LR scAb and detection of microcystins in extracts of cyanobacterial strains.
Indirect competition ELISA was employed to determine the ability of the most sensitive anti-microcystin-LR scAb clone (3A8) to detect three other purified microcystin variants (microcystin-RR, -LW, and -LF) and the related cyanobacterial hepatotoxin nodularin. Doubling dilutions of each toxin were prepared in sterile PBS, and ELISA was carried out as described above.
Cyanobacterial extracts were prepared from three lyophilized strains of Microcystis aeruginosa, PCC 7820 (Pasteur Culture Collection, Paris, France), Sciento (Manchester, United Kingdom), and CYA 43 (NIVA Culture Collection for Algae, Oslo, Norway). Extraction was carried out for 1 h in 80% methanol in Milli-Q water at a concentration of 50 mg (dry weight) of cells ml-1. Microcystin concentrations in extracted samples were determined by HPLC with photodiode array detection as described previously (20). A Waters 996 detector was used, with resolution set at 1.2 nm and data acquired from 200 to 300 nm. Separation was carried out on a Waters Symmetry C18 column (250-mm length, 4.6-mm inside diameter; 5-mm particle size). The extracts were dried under nitrogen, resuspended in PBS, and diluted to give concentrations ranging from 250 to 0.75 mg of cells liter-1. The microcystin concentrations in each extract were then determined in duplicate by indirect competition ELISA.
Preparation of anti-microcystin-LR immunoaffinity gel.
The anti-microcystin-LR immunoaffinity gel was prepared by coupling 30 µg of 3A8 scAb to 0.5 ml of Ni2+ charged Fast Flow Sepharose for 2 h at room temperature with gentle rotation in a polypropylene column (Bio-Rad, Hercules, Calif.). The columns were washed several times with 5 ml of sterile PBS to remove unbound scAb prior to use. Binding of scAb to the Ni2+ charged Sepharose support was confirmed by capture ELISA of the column eluates. The binding capacity of the gel was determined by resuspending it in 1 ml of an aqueous solution of microcystin-LR at a concentration of 0.7 µg ml-1. The solution was allowed to diffuse through the gel to enable binding of the microcystin-LR to the immobilized scAb. The eluate was collected and analyzed by HPLC to determine the breakthrough of the toxin. This procedure was repeated 20 times to determine the maximum amount of microcystin-LR which could be bound to the immunoaffinity column. The gel was then washed with 1 ml of distilled water, and the total bound microcystin-LR was eluted in four 1-ml fractions of 100% methanol (Rathburn, Walkerburn, United Kingdom). The recovery of microcystin-LR in each of the eluted methanol fractions was determined by HPLC as before.
The procedure was repeated using Ni2+ charged Fast Flow Sepharose without immobilized 3A8 scAb in order to confirm that binding of microcystin-LR to the immunoaffinity gel was not due to nonspecific interactions between the toxin and the Sepharose support.
Concentration of microcystin-LR from distilled water using immunoaffinity columns.
The 3A8 immunoaffinity columns were then evaluated for the ability to concentrate low concentrations of microcystin-LR from large sample volumes to allow identification of the toxin by HPLC. The immunoaffinity gel was prepared as described above and transferred to 1-ml Isolute column reservoirs (Jones Chromatography, Mid Glamorgan, United Kingdom), each fitted with two 10-µm-pore-size polyethylene frits. Triplicate samples of distilled water (150 ml) spiked with 2 ml of a 2-µg ml-1 aqueous solution of purified microcystin-LR were applied to columns at a flow rate of 3 ml min-1 using a VacMaster sample-processing station (Jones Chromatography). The columns were washed with 1 ml of distilled water, and microcystin-LR was eluted as before. All samples were analyzed by HPLC.
Nucleotide sequence accession numbers.
The sequences of the heavy- and light-chain genes for clone 3A8 have been published in GenBank (accession numbers AF533986 and AF533987).
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FIG. 1. Binding affinities of phage rescued at each round of panning for microcystin-LR-BSA (), microcystin-LR-KLH ( ), BSA ( ), and KLH ( ) as determined by polyclonal phage ELISA. The points are the means of three determinations and are a representative set from repeated experiments. The error bars represent sample standard errors.
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Fingerprinting of antibody VH and VL genes from selected phage clones indicated six different banding patterns (results not shown). These six unique scFv genes were subcloned into the soluble expression vector pIMS147 (12) for expression in E. coli XL-1 Blue cells.
The binding of the six expressed scAb clones to free antigen was determined by competition ELISA using a subsaturating concentration of scAb (with respect to microcystin-LR-BSA binding) incubated with a range of free microcystin-LR concentrations. All six scAbs bound to free microcystin-LR, with concentrations required to inhibit 50% of binding (IC50s) ranging from 4.5 nM to 1 µM (Table 1). Subsequent experiments were carried out using the most sensitive scAb clone, 3A8. The detection limit (IC20) of this scAb was determined to be 0.8 nM (Fig. 2).
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TABLE 1. Sensitivities of purified scAbs isolated from the Griffin.1 phage display library against purified microcystin-LR
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FIG. 2. Indirect competition ELISA determining the ability of scAb clone 3A8 to recognize free microcystin-LR. The dashed line represents the IC50 of free microcystin-LR, and the dotted line represents the detection limit of the assay (the IC20 of free microcystin-LR). The points are the means of three determinations and are a representative set from repeated experiments. The error bars represent sample standard errors.
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FIG. 3. Indirect competition ELISA determining the ability of scAb clone 3A8 to recognize microcystin-RR (), nodularin ( ), microcystin-LW ( ), and microcystin LF ( ). The dashed line represents the IC50 of free microcystin variant. The points are the means of three determinations and are a representative set from repeated experiments. The error bars represent sample standard errors.
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FIG. 4. Indirect competition ELISA determining the ability of scAb 3A8 to detect microcystins in cyanobacterial extracts from three strains of M. aeruginosa, 7820 (), Sciento ( ), and CYA 43 ( ). The dashed line represents the IC50 of extract. The points are the means of two determinations and are a representative set from repeated experiments. The error bars represent sample standard errors.
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FIG. 5. Determination of the maximum load of the anti-microcystin-LR immunoaffinity column prepared with 30 µg of scAb 3A8 bound to 0.5 ml of Ni2+ charged Fast Flow Sepharose. The graph shows the percentage of unbound microcystin-LR collected after 0.7 µg ml-1 was loaded in distilled water, as determined by HPLC.
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Application of immunoaffinity columns to concentrate microcystin-LR from water.
The potential of 3A8 immunoaffinity columns to concentrate microcystin-LR from large sample volumes was determined using 150 ml of distilled water spiked with 4 µg of the purified toxin. The concentration of microcystin-LR in these samples (27 ng ml-1) fell below the limit of quantification offered by HPLC analysis (400 ng ml-1) (Fig. 6a). Application of triplicate samples to scAb 3A8 immunoaffinity columns followed by elution in 1 ml of 100% methanol recovered 94% (±3.6%) of the microcystin-LR and allowed identification and quantification of the toxin in concentrated samples by HPLC analysis (Fig. 6b).
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FIG. 6. HPLC chromatograms of a 150-ml sample of distilled water spiked with 4 µg of purified microcystin-LR before (a) and after (b) concentration on a scAb 3A8 immunoaffinity column.
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The improved sensitivity of antibody fragments isolated from the Griffin.1 library compared to those from the Tomlinson I library may be associated with the length of the third complementary determining region (CDR3) in the heavy-chain variable domain, which is thought to play an important role in anti-hapten binding (14). Recent studies have suggested that while shorter heavy-chain CDR3s tend to form planar binding sites suitable for binding large proteins, longer heavy-chain CDR3s are capable of forming anti-hapten binding pockets (5, 36). The heavy-chain CDR3 in the Tomlinson I library is conserved at seven amino acids, while the Griffin.1 library incorporates variable heavy-chain CDR3 lengths. Panning of the Griffin.1 library against microcystin-LR conjugates enabled the isolation of a more sensitive anti-microcystin-LR clone (3A8), which was found to have 10 amino acid residues at this position (36).
ELISA of purified microcystins and nodularin using scAb 3A8 revealed that while it recognized all of the toxins assayed, cross-reactivity was variable. The scAb appeared to bind most strongly to microcystin-RR, followed by microcystin-LR and nodularin. However, 3A8 was over 40 times less sensitive for microcystin-LW and -LF. This may be due to the method employed to couple microcystin-LR to BSA and KLH for immobilization during panning. The conjugation of microcystin-LR to carrier proteins via N-methyldehydroalanine (Fig. 1) is believed to expose the arginine residue located adjacent to Adda at position 4 of the peptide ring (29, 40). Like Adda, the arginine side chain in microcystin-LR is flexible (1), and its exposure may have biased the selection of antibody fragments during panning. The ability of scAb 3A8 to recognize arginine side chains, which are present in microcystin-LR and -RR and nodularin but not in microcystin-LW and -LF, may account for its variable cross-reactivity. However, this did not appear to have any effect on the detection and quantification by ELISA of microcystins in toxic extracts of M. aeruginosa, despite the differences in the toxin profiles of these extracts. HPLC analysis of the 7820 extract revealed microcystin-LR, -LY, -LW, and -LF, while the Sciento extract was found to contain microcystin-LR and -RR. Determinations of microcystins in these extracts as microcystin-LR equivalents by ELISA were only slightly underestimated compared with HPLC analysis. The scAb was also capable of distinguishing between toxic and nontoxic strains of M. aeruginosa, as no microcystins were detected in the CYA 43 extract by either HPLC or ELISA. Interestingly, one of the other scAb clones isolated during panning (5B6 [Table 1]) was found to be more sensitive for microcystin-LW and -LF than scAb 3A8 (results not shown) despite being 10 times less sensitive for microcystin-LR. It may be possible to optimize the cross-reactivity of the current ELISA format for natural samples by using a combination of these scAbs.
This study also demonstrated the potential of anti-microcystin scAbs in the immunoaffinity concentration of microcystins from large volumes of water (Fig. 6). HPLC analysis of microcystins in biological and environmental samples, such as plant and animal tissues or lake water, often requires the removal of contaminating sample matrix effects. In most monitoring studies, samples are processed using solid-phase extraction with octadecyl silanized cartridges before analysis by HPLC (15, 38). However, this method is not sufficiently selective to eliminate coeluting compounds, which can interfere with the accurate identification and quantification of microcystins in natural samples. Immunoaffinity chromatography has shown considerable promise in the concentration and cleanup of microcystins from natural samples prior to HPLC analysis (15, 16, 38). However, current methods employing either polyclonal or monoclonal antibodies are extremely limited due to the time and expense required to produce the large amounts of antibodies necessary for preparing immunoaffinity columns. To resolve this problem, complex methodologies have recently been developed to enable the columns to be reused (17). In the present study, retention of microcystin-LR by immobilized scAb was found to decrease significantly when the columns were used more than once (data not shown). While elution in 100% methanol facilitated maximum recovery of bound toxin, it is likely to have had an adverse effect on scAb stability. Alternative elution methods could be investigated to determine whether column regeneration is possible. It may also be possible to stabilize the scAb through introduction of an interdomain disulfide bond, which has previously been shown to improve the performance of recombinant antibody fragments in methanol (7, 35). However, as it is possible to express large quantities of recombinant scAbs in E. coli at relatively low cost, the development of reusable columns may not be necessary. A further advantage of the columns developed in this study is that immobilization of scAb via the hexahistidine tag ensures maximum exposure of antigen binding sites. This enabled over 6 µg of microcystin-LR to be retained on columns prepared using only 30 µg of purified scAb. It is also worth noting that while previously reported methods require large-volume water samples to be concentrated to 5 to 15 ml prior to immunoaffinity chromatography (18, 38), the columns developed here allowed 150 ml of distilled water to be directly applied to the scAb immunoaffinity column without affecting retention. Although our scAb immunoaffinity columns have yet to be tested using natural water samples or bloom material, performance may be improved by using combinations of scAbs or by immobilizing larger quantities. As the scAb isolated during this study can be expressed rapidly and inexpensively in E. coli, it will enable us to optimize these columns for the concentration and cleanup of microcystins, providing a powerful tool for the analysis of these toxins in a variety of sample matrices.
We also thank Ian Tomlinson and the Medical Research Council (Cambridge) for providing the Griffin.1 library and K. Charlton and G. Strachan (Haptogen Ltd., Scotland, United Kingdom) for their guidance.
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