Previous Article | Next Article ![]()
Applied and Environmental Microbiology, December 2002, p. 6029-6035, Vol. 68, No. 12
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.12.6029-6035.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Urban Engineering, University of Tokyo, Bunkyo-ku, Tokyo, Japan
Received 14 March 2002/ Accepted 23 September 2002
|
|
|---|
|
|
|---|
The mechanisms by which UV light inactivates microorganisms are different at different wavelengths (14). The germicidal effect of short-wavelength UV light (UV-C and UV-B; 220 to 320 nm) is mainly due to the formation of cis-syn cyclobutane pyrimidine dimers in the genome DNA of the organisms, while (6-4) photoproducts and other photoproducts are also produced at lower ratios (4, 14). The lesions inhibit the normal replication of the genome and result in inactivation of the microorganisms. Besides genomes, proteins and enzymes with unsaturated bonds are known to absorb UV-C and UV-B, which may also result in significant damage to the organisms (17). On the other hand, long-wavelength UV light (UV-A; 320 to 400 nm) is known to damage organisms mainly by exciting photosensitive molecules inside the cell to produce active species such as O2·-, H2O2, and ·OH, which damage the genome and other intracellular molecules and cause lethal and sublethal effects, such as mutations and growth delay (8, 16, 22, 23, 24).
Some organisms are known to possess mechanisms to repair UV-damaged DNA. Photoreactivation is one DNA repair mechanism, while other mechanisms are commonly referred to as dark repair in contrast to photoreactivation (11). Special attention has been paid to photoreactivation because it may greatly impair the efficacy of UV disinfection within a few hours after treatment. Photoreactivation is the phenomenon by which UV-inactivated organisms regain their activity via photorepair of UV-induced lesions in the DNA by utilizing the energy of near-UV light (310 to 480 nm) and an enzyme, photolyase (11, 14). Therefore, UV-A is essential for photoreactivation, although it also has lethal and sublethal effects on organisms, as mentioned above. Jagger called this phenomenon concomitant photoreactivation because the inactivating light itself has the potential to photorepair the dimers (16). The ability to perform photoreactivation differs from species to species, and most strains of Escherichia coli, the indicator bacterium used in water quality control, are known to be capable of photoreactivation. The photolyase of E. coli is basically specific for repair of pyrimidine dimers, while some organisms were recently found to have a photoreactivating enzyme specific for (6-4) photoproducts (19, 27, 28). The diversity and distribution of photolyase are still controversial issues, and it is therefore important to investigate the photoreactivation ability of key microorganisms, such as indicator bacteria. Moreover, quantitative determination of photoreactivation is essential in order to be able to calculate the UV doses necessary to compensate for the potential repair in advance.
The most conventional UV lamps used for disinfection are low-pressure (LP) UV lamps, while medium-pressure (MP) UV lamps have also been used. LP UV lamps have monochromatic emission at a wavelength of 254 nm, which is most efficiently absorbed by DNA bases and therefore has some of the greatest germicidal effects among UV wavelengths (14). On the other hand, MP UV lamps emit polychromatic light at a broad range of wavelengths, from around 200 to 600 nm. MP UV lamps can emit light at a high intensity, which allows MP UV systems to be operated at higher flow rates than LP UV systems (12, 17). MP UV lamps are known to be as effective as conventional LP UV lamps at inactivating microorganisms or more effective (6, 7, 13), and the photoreactivation that occurs after MP UV disinfection results in a requirement for further inactivation because of its importance.
The purpose of this study was to compare a polychromatic MP UV lamp (220 to 580 nm) with a monochromatic LP UV lamp (254 nm) in terms of photoreactivation of E. coli. In addition, photoreactivation of E. coli after exposure to a filtered MP (MPF) UV lamp (300 to 580 nm) was also investigated in order to clarify the effects of inactivating light wavelengths on the subsequent photoreactivation. An endonuclease sensitive site (ESS) assay, which previously proved to be useful for determining the number of pyrimidine dimers in the genomic DNA of E. coli (20), was used along with a conventional cultivation assay in order to investigate UV inactivation and subsequent photoreactivation of E. coli both at the genomic level and at the colony-forming-ability (CFA) level.
|
|
|---|
Light exposure.
Two LP UV lamps (20 W; Stanley GL6; Toshiba) or an MP UV lamp (330 W; B410MW; Ebara) was used for inactivation. In order to investigate the effect of long wavelengths, the MP UV lamp emission was filtered through a Pyrex glass plate (thickness, 1 mm). A multichannel photodetector (MCPD-2000; Otsuka) showed that the emissions of the LP, MP, and MPF UV lamps were at wavelengths of 254, 220 to 580, and 300 to 580 nm, respectively. The germicidal intensity of the light emitted from each lamp was standardized by determining the irradiance of light at 254 nm with a biodosimeter by using F-specific RNA coliphage Qß (18). Briefly, a pure-culture suspension of phage Qß at an initial concentration of 2.0 x 106 PFU · ml-1 was exposed to the LP, MP, and MPF UV lamps to determine the inactivation curves by a double-agar-layer method with LB agar (Merck) by using E. coli K-12 strain F+ A/
as the host organism. The rate of inactivation of phage Qß for each lamp was compared with the inactivation rate constant for phage Qß at 254 nm to determine the irradiance values for the LP, MP, and MPF UV lamps (0.24, 3.0, and 0.25 mW · cm-2, respectively). The irradiance values were fixed throughout the experiment, and UV doses were controlled by changing the exposure time.
Each 99.9% (3-log) inactivation of the CFA ratio (see below) was followed by exposure to fluorescent lamps (18 W; Hitachi) for 3 h to allow photoreactivation. The irradiance of the photoreactivating light at 360 nm was 0.1 mW · cm-2, as measured with a UV radiometer (UVR-2 UD-36; Topcon). All preparations of E. coli were constantly stirred magnetically throughout the experiment and kept in the dark except during exposure to UV and fluorescent light. The sample temperature was kept at 20°C by circulating cooling water around the petri dishes.
Cultivation assay.
The CFA of E. coli was investigated by using a deoxycholate acid agar medium (Eiken) in a dark room and the standard methods for examination of water (30). The number of CFU after incubation at 37°C for 18 h was determined, and the ratio of the CFA of E. coli was calculated as follows:
, where CFAt is the ratio of CFA at irradiation time t, Nt is the number of CFU at irradiation time t, and N0 is the number of CFU before UV irradiation.
ESS assay.
An ESS assay allows recognition of pyrimidine dimers in DNA at ESS by treatment of DNA with a UV endonuclease, which incises a phosphodiester bond specifically at the site of a pyrimidine dimer. The molecular lengths of fragmented DNA are determined by alkaline agarose gel electrophoresis, followed by a theoretical calculation to obtain the number of ESS (26).
The conditions for the ESS assay used in this study were basically the same as those described previously (20). After the irradiation procedures, the E. coli suspensions were centrifuged (5,000 x g, 10 min), and the pellets were subjected to DNA extraction procedures (Genomic-tip; Qiagen). The extracted DNA was concentrated by using centrifugal filter devices (Centricon; Millipore) and resuspended in a UV endonuclease buffer containing 30 mM Tris (pH 8.0), 40 mM NaCl, and 1 mM EDTA. The DNA preparations were treated with a UV endonuclease from Micrococcus luteus, prepared by the method of Carrier and Setlow (3), at 37°C for 45 min. The reaction was stopped by addition of an alkaline loading dye preparation containing (final concentrations) 100 mM NaOH, 1 mM EDTA, 2.5% Ficoll, and 0.05% bromocresol green. The DNA samples were electrophoresed at 0.5 V/cm for 16 h on 0.5% alkaline agarose gels in an alkaline buffer containing 30 mM NaOH and 1 mM EDTA along with two molecular length standards, T4dC+T4dC/BglI digest mixture (7GT; Wako) and T4dC+T4dC/BglII digest mixture (8GT; Wako). After electrophoresis, the gels were stained in a 0.5-µg/ml solution of ethidium bromide, photographed, and analyzed (Gel Doc 1000 Molecular Analyst; Bio-Rad). The midpoint of the mass of DNA was photographically determined by determining the median migration distance of each sample, which was converted into the median molecular length (Lmed) of the DNA relative to the migration patterns of the molecular length standards. The average molecular length (Ln) of the DNA was obtained by using the equation of Veatch and Okada (29):
.
The number of ESS per base was calculated as follows (9):
, where Ln(+UV) and Ln(-UV) are the average molecular lengths of UV-irradiated and nonirradiated samples, respectively.
The ESS remaining ratio, the ratio of the number of ESS during fluorescent light exposure to the number of ESS before fluorescent light exposure, was defined as follows:
, where t is the time of exposure to the fluorescent light irradiation and t0 is zero time.
Photorepair treatment of DNA in vitro.
A solution of E. coli photolyase was prepared from nonirradiated E. coli by using the method of Friedberg and Hanawalt (10). Briefly, 5 x 109 cells of E. coli K-12 were lysed by sonication (20 passes at 70% output; model W185 sonifier; Branson) on ice and centrifuged (120,000 x g, 60 min), and this was followed by ammonium sulfate precipitation and chromatography purification by using a 25-ml phenyl-Sepharose column (CL-4B; Sigma) and a 20-ml hydroxylapatite column (Bio-Gel HT; Bio-Rad). The purified photolyase solution was confirmed not to be contaminated with other DNA repair enzymes for dark repair by repair treatment of ESS in vitro without exposure to fluorescent light. Some of the photolyase solution was directly exposed to the MP UV lamp in vitro at a dose of 6.3 mJ · cm-2 to obtain MP UV-exposed photolyase. Separate from the photolyase preparation, the genomic DNA of E. coli was extracted from an E. coli suspension previously exposed to an MP UV lamp in vivo at a dose of 6.3 mJ · cm-2. The extracted DNA was suspended in the UV endonuclease buffer solution as described above and was mixed with the intact or the MP UV-exposed photolyase; this was followed by immediate exposure to the fluorescent light in vitro at 37°C for 45 min. Subsequently, the DNA-photolyase mixtures were subjected to the ESS assay as described above to determine the number of ESS after the photorepair treatment in vitro.
|
|
|---|
![]() View larger version (47K): [in a new window] |
FIG. 1. Gel images for ESS assays of E. coli during exposure to LP, MP, or MPF UV lamps. (A) Exposure to LP UV. Lanes 1 and 2, standard markers; lane 3, no UV; lanes 4 to 6, UV doses of 1.9, 3.8, and 5.7 mJ · cm-2, respectively. (B) Exposure to MP UV. Lanes 1 and 6, standard marker; lane 2, no UV; lanes 3 to 5, UV doses of 2.1, 4.2, and 6.3 mJ · cm-2, respectively. (C) Exposure to MPF UV. Lane 1, standard marker; lane 2, no UV; lanes 3 to 5, UV doses of 1.8, 3.6, and 5.4 mJ · cm-2, respectively.
|
![]() View larger version (15K): [in a new window] |
FIG. 2. Numbers of ESS in E. coli after exposure to an LP UV lamp ( ), an MP UV lamp ( ), or an MPF UV lamp ( ). The data are the results of five independent exposures to each type of lamp.
|
![]() View larger version (14K): [in a new window] |
FIG. 3. CFA ratios for E. coli after exposure to an LP UV lamp ( ), an MP UV lamp ( ), or an MPF UV lamp ( ). The data are the results of five independent exposures to each type of lamp.
|
![]() View larger version (15K): [in a new window] |
FIG. 4. Relationships between the numbers of ESS and the CFA ratios for E. coli after exposure to an LP UV lamp ( ), an MP UV lamp ( ), or an MPF UV lamp ( ). The data are the results of five independent exposures to each type of lamp.
|
![]() View larger version (46K): [in a new window] |
FIG. 5. Gel images for ESS assays of E. coli after exposure to fluorescent light after LP, MP, or MPF UV inactivation. (A) Exposure to LP UV. Lane 1, standard marker; lane 2, no UV; lane 3, UV dose of 5.7 mJ · cm-2; lanes 4 to 8, UV dose of 5.7 mJ · cm-2, followed by exposure to fluorescent light for 30, 60, 90, 120, and 180 min, respectively. (B) Exposure to MP UV. Lane 1, no UV; lane 2, UV dose of 6.3 mJ · cm-2; lanes 3 to 6, UV dose of 6.3 mJ · cm-2, followed by exposure to fluorescent light for 60, 90, 120, and 180 min, respectively; lane 7, standard marker. (C) Exposure to MPF UV. Lane 1, standard marker; lane 2, no UV; lane 3, UV dose of 5.4 mJ · cm-2; lanes 4 to 6, UV dose of 5.4 mJ · cm-2, followed by exposure to fluorescent light for 60, 120, and 180 min, respectively.
|
![]() View larger version (17K): [in a new window] |
FIG. 6. ESS remaining ratios after exposure to fluorescent light after LP UV ( ), MP UV ( ), or MPF UV ( ) inactivation. The symbols indicate the means from two or three independent experiments, and the bars indicate the maximum and minimum values.
|
![]() View larger version (22K): [in a new window] |
FIG. 7. Photorepair of ESS in vivo ( ), in vitro with intact photolyase ( ), or in vitro with MP-exposed photolyase ( ) after MP inactivation. Lane 1, standard marker; lane 2, no UV; lane 3, MP UV dose of 6.3 mJ · cm-2; lane 4, MP UV dose of 6.3 mJ · cm-2, followed by photorepair in vivo; lanes 5 and 6, MP UV dose of 6.3 mJ · cm-2, followed by photorepair in vitro with intact photolyase (lane 5) or with MP-exposed photolyase (lane 6). For photorepair in vivo, MP UV-irradiated E. coli was subsequently exposed to fluorescent light. For photorepair in vitro, DNA of MP UV-irradiated E. coli was exposed to fluorescent light in vitro with intact or MP UV-exposed photolyase. The symbols indicate the means from two or three independent experiments, and the bars indicate the maximum and minimum values.
|
![]() View larger version (17K): [in a new window] |
FIG. 8. CFA ratios after exposure to fluorescent light after LP UV ( ), MP UV ( ), or MPF UV ( ) inactivation. The symbols indicate the means from two or three independent experiments, and the bars indicate the maximum and minimum values.
|
|
View this table: [in a new window] |
TABLE 1. Photoreactivation characteristics of E. coli after LP, MP, or MPF UV inactivation
|
![]() View larger version (14K): [in a new window] |
FIG. 9. Relationships between the ESS remaining ratios and the CFA ratios after exposure to fluorescent light after LP UV ( ), MP UV ( ), or MPF UV ( ) inactivation. The data indicate three independent results for each type of lamp.
|
|
|
|---|
The ratio of CFA showed log-linear relationships with the number of ESS during exposure to LP, MP, or MPF UV, while the ESS-CFA relationships were not clearly different for the three types of lamps. This suggests that the numbers of ESS necessary to decrease the CFA of E. coli are not significantly different for inactivation with the different wavelengths (254, 220 to 580, and 300 to 580 nm). This may imply that the culturability of E. coli is regulated mostly by pyrimidine dimers and is not greatly affected by other damage during inactivation.
Figure 7 shows that even ESS in MP UV-irradiated E. coli, which were not repaired by exposure to fluorescent light in vivo, were photorepaired in vitro with either intact or MP UV-exposed photolyase. This suggests that the MP UV-induced pyrimidine dimers were not structurally different from other photorepairable dimers and that the failure to repair MP UV-induced ESS in vivo was caused by a disorder with the endogenous photolyase in E. coli. Moreover, even MP UV-exposed photolyase could repair ESS in vitro, indicating that the photolyase itself was not inactivated by MP UV irradiation. It was therefore assumed that MP UV irradiation did not affect the activity of endogenous photolyase but reduced the amount of photolyase in E. coli, possibly by affecting regulation of the photolyase gene to lower expression. The failure in ESS repair was not observed after MPF UV treatment; it was observed only after MP UV treatment. This suggests that the disorder of photolyase was caused by wavelengths between 220 and 300 nm, although it is possible that the difference in irradiance between MP UV and MPF UV affected this phenomenon. The detailed mechanisms of exposure to MP UV that reduce the repair of ESS may be an interesting subject for further investigation. The results of photorepair treatment in vitro suggested that the MP UV lamp was effective at reducing the subsequent photorepair of pyrimidine dimers at the enzyme level.
Table 1 and Fig. 9 show that both the repair of ESS and the recovery of CFA were observed after exposure to LP or MPF UV, while neither was apparently observed after exposure to MP UV irradiation. Table 1 and Fig. 9 also indicate that MPF UV resulted in less recovery of CFA than LP UV, although the levels of repair of ESS were equivalent after exposure to LP UV and after exposure to MPF UV, suggesting that the contribution of ESS repair to CFA recovery was less after exposure to MPF UV than after exposure to LP UV. This implies that exposure to MPF UV induced more damage besides pyrimidine dimer damage than exposure to LP UV irradiation induced; the latter reduced the recovery of CFA even after the repair of ESS. Among the MPF UV emissions, UV-A (320 to 400 nm) may play an important role in this respect because UV-A indirectly damages organisms through active species. As discussed above (Fig. 4), the ESS-CFA relationships of LP UV and MPF UV were not significantly different in terms of inactivation procedures, and it was therefore assumed that the culturability was regulated mostly by pyrimidine dimers and was not greatly affected by other damage during inactivation. On the other hand, damage in addition to pyrimidine dimer damage was thought to play an important role in the recovery of culturability during photoreactivation procedures. These two results can be reasonably explained by considering that pyrimidine dimer damage and other damage were simultaneously produced by exposure to MPF UV but only pyrimidine dimer damage could be photorepaired by exposure to fluorescent light. Simultaneous formation of pyrimidine dimers and other compounds may have occurred during exposure to MP UV as well, although even pyrimidine dimers could not be photorepaired in this case because of the disorder with photolyase, as discussed above.
In summary, the MP UV lamp was found to be more effective than the LP UV lamp for reducing subsequent photoreactivation of E. coli both in terms of photorepair of ESS and in terms of recovery of CFA. Among the emissions of the MP UV lamp, wavelengths from 220 to 300 nm were found to reduce the subsequent photorepair of pyrimidine dimers, possibly by causing a disorder with endogenous photolyase, while wavelengths between 300 and 580 nm were found to play an important role in reducing the recovery of culturability by inducing damage other than pyrimidine dimer damage. It was therefore concluded that inactivating light at a broad range of wavelengths was effective for reducing subsequent photoreactivation of E. coli, which could be an advantage that MP UV lamps have over conventional LP UV lamps from the viewpoint of photoreactivation control.
|
|
|---|
This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2009 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»