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Applied and Environmental Microbiology, April 2002, p. 1534-1540, Vol. 68, No. 4
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.4.1534-1540.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Facultad de Ciencias Naturales y Museo, Instituto de Botánica Spegazzini, Universidad Nacional de La Plata, 53 # 477, 1900 La Plata, Argentina,1 Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas, Velázquez 144, 28006 Madrid, Spain2
Received 3 August 2001/ Accepted 24 January 2002
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The enzymatic composition of the ligninolytic system depends on the fungal species, with laccase being the common component (24, 43). For this reason, a wide number of studies have focused on demonstrating the participation of laccase in significant ligninolytic events which were first attributed to other enzymes of the ligninolytic system. These events include the oxidation of nonphenolic lignin units, which comprise ca. 80% of the polymer, the generation of the H2O2 required for both peroxidase activities and hydroxyl radical (·OH) formation, and the production of Mn3+ from the Mn2+ present in lignocellulose. Mn3+ and ·OH are low-molecular-weight ligninolytic agents which are believed to play a key role in the initial attack of lignocellulose when the ligninolytic enzymes cannot penetrate through the plant cell walls (17, 30). Laccase catalyzes directly the oxidation of phenolic lignin units and a wide number of phenolic compounds and aromatic amines, with molecular oxygen as the electron acceptor, which is reduced to water (49). In the presence of certain white rot fungi metabolites or artificial substrates acting as mediators, the substrate range of laccase was extended to nonphenolic lignin units (4, 15). These laccase-mediator systems have been shown to degrade not only lignin but also several aromatic and aliphatic xenobiotics (29, 39). The participation of laccase in the production of reduced oxygen species, i.e., superoxide anion radical (O2·-), H2O2, and ·OH, has been demonstrated through the oxidation of lignin-derived hydroquinones (19, 22). The oxidation of Mn2+ by laccase has been described to occur both directly (26) and through the oxidation of hydroquinones as a consequence of O2·- generation (21, 38).
Coriolopsis rigida is a white rot fungus that has been studied with regard to its capacity to degrade lignin from wheat straw (9) and the aliphatic and aromatic fractions of crude oil from artificially contaminated soils (13). Except for the production of an ABTS [2,2'-azinobis(3-ethylbenzthiazolinesulfonic acid)]-oxidizing activity by C. rigida in solid medium (46), which suggests the secretion of ligninolytic enzymes, the ligninolytic system of this fungus remains unknown. In this study we describe the purification and characterization of two laccase isoenzymes from C. rigida grown under liquid culture conditions. As is the case with the efficient lignin degrader Pycnoporus cinnabarinus (16), C. rigida produced laccase as the sole ligninolytic enzyme under the culture conditions used in this study. This characteristic makes C. rigida an interesting model for studying alternative mechanisms by which laccase degrades lignin and xenobiotics. We concentrate our attention here on the oxidative capabilities of laccase, including the production of strong oxidants which would be implicated in these degradative processes.
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Fungal strain and culture conditions.
C. rigida CLPS 232 (Spegazzini Institute Culture Collection) was isolated from decaying wood collected in a subtropical Argentine rain forest (28). This strain has been deposited in the Spanish Type Culture Collection (CECT 20449). Stock cultures were kept at 4°C on 2% (wt/vol) malt extract-agar slants supplemented with yeast extract (0.4%) and Populus wood chips. The production of extracellular ligninolytic enzymes was carried out in a C-limited-yeast extract medium (20) supplemented with 5 g of peptone liter-1. The addition of 150 µM CuSO4 on the third day of incubation was assayed as an inducer of laccase activity (14). Homogenized pellets from 7-day-old shaken cultures were used to inoculate 1,000-ml Erlenmeyer flasks containing 200 ml of medium (3.5 mg ml-1). The flasks were incubated at 28°C in a rotary shaker at 160 rpm. Samples were taken periodically from four replicate flasks, and the mycelium was separated from the culture liquid by centrifugation at 20,000 x g and 4°C during 10 min.
Analysis of protein, reducing sugars, and enzymatic assays.
Extracellular protein was determined by Bradford method by using Bio-Rad protein assay (product number 500-0006) and bovine serum albumin as the standard. Reducing sugars were assayed by Somogyi and Nelson method, with glucose as the standard (48). Unless otherwise stated, laccase activity was measured by using 5 mM 2,6-dimethoxyphenol (DMP) in 100 mM sodium tartrate buffer (pH 3.0;
469 = 27,500 M-1 cm-1, referred to as the DMP concentration). Peroxidase activity was assayed as laccase activity in the presence of 0.1 mM H2O2. Aryl-alcohol oxidase activity was estimated by 3,4-dimethoxybenzaldehyde (veratraldehyde) formation (
310 = 9,300 M-1 cm-1) from 5 mM veratryl alcohol in 100 mM phosphate buffer (pH 6). Lignin peroxidase activity was determined by the H2O2-dependent veratraldehyde formation from 2 mM veratryl alcohol in 100 mM sodium tartrate buffer (pH 3), and the reactions were started by the addition of 0.4 mM H2O2. Manganese peroxidase activity was estimated by measuring the formation of Mn+3-tartrate complex (
238 = 6,500 M-1 cm-1) during the oxidation of 0.1 mM Mn2+(MnSO4) in 100 mM sodium tartrate buffer (pH 5) in the presence of 0.1 mM H2O2. All of the oxidation rates were determined at room temperature (22 to 25°C). International enzymatic units (in micromoles per minute) were used.
Laccase purification.
Preliminary characterization of laccase from crude enzyme preparation obtained by culture liquid ultrafiltration (see below) was carried out to obtain enough information to design the purification process. The pH stability of laccase activity was studied in 100 mM borate-citrate-phosphate buffer (pH 2 to 12) at room temperature. The isoelectric point of the laccases was determined by zymograms on 5% polyacrylamide gels with a thickness of 1 mm by using a pH range from 3 to 10 (Bio-Rad Ampholine). The anode and cathode solutions were 1 M phosphoric acid and 1 M sodium hydroxide, respectively. The pH gradient formed was measured on the gel by means of a contact electrode. Protein bands with laccase activity were detected by using 5 mM DMP in 100 mM sodium tartrate buffer (pH 3) after the gels were washed for 20 min with the same buffer.
C. rigida laccase was purified from 15-day-old cultures containing CuSO4. The culture liquid, separated from the mycelia by centrifugation at 20,000 x g, was 7.5-fold concentrated and dialyzed against 10 mM sodium acetate (pH 4.5) by ultrafiltration (Filtron; 5-kDa cutoff membrane). This crude enzyme preparation was applied to a Bio-Rad Q-Cartridge equilibrated with the same buffer at a flow rate of 1 ml min-1. Retained proteins were eluted for 50 min with a NaCl gradient from 0 to 350 mM. Fractions of 2 ml were collected in tubes containing 0.15 ml of 500 mM phosphate buffer (pH 7). Fractions with the laccase activity were pooled and concentrated (Filtron Microsep; 3-kDa cutoff), and samples of 0.2 ml were applied to a Superdex 75 (Pharmacia HR 10/30) column equilibrated with 200 mM phosphate buffer (pH 7) at a flow rate of 0.4 ml min-1. The laccase peak was pooled, concentrated (Filtron Microsep, 3-kDa cutoff), and dialyzed against 10 mM sodium acetate (pH 4.5), and 1-ml samples were applied to a Mono-Q anion-exchange column (Pharmacia HR 5/5) equilibrated with the same buffer containing 20 mM NaCl. Both laccase isoenzymes were eluted with a linear NaCl gradient from 20 to 100 mM for 55 min at a flow rate of 0.8 ml min-1. Laccase peaks were collected, concentrated, and stored at -80°C.
Properties of purified laccases.
The molecular mass of the laccase isoenzymes was determined by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and gel filtration. SDS-PAGE was performed with 7.5% polyacrylamide gels by using low-molecular-mass standards (Bio-Rad). Gel filtration was carried out on Superdex 75 as described above. The column was calibrated with aldolase (158 kDa), albumin (67 kDa), ovalbumin (43 kDa), and RNase A (13.7 kDa). The N-carbohydrate content of purified laccases was derived from the difference in molecular mass (estimated by SDS-PAGE) found before and after treatment of laccase isoenzymes with endo-ß-N-acetylglucosaminidase. Isoelectric focusing was performed as described above but with a 2.5 to 5.5 pH range, which was achieved by mixing 85 and 15% Bio-Rad Ampholines from pH 2.5 to 5 and from pH 3.5 to 10, respectively. Protein bands after SDS-PAGE and isoelectric focusing were stained with Coomassie blue R-250. N-terminal sequences of laccase isoenzymes were determined by automated Edman degradation of 5 µg of protein in an Applied Biosystem protein sequencer (Procise 494; Perkin-Elmer). The UV-visible spectra of native isoenzymes were recorded in 5 mM sodium phosphate (pH 7.0).
Substrate specificity.
We tested 23 compounds as substrates of the C. rigida laccases. This was qualitatively explored by changes in the optical absorbance spectra of the reaction mixtures which contained 400 µM potential substrate, 50 mU of purified isoenzymes ml-1, and 100 mM sodium tartrate buffer (pH 5). The kinetic constants of laccase isoenzymes were calculated for DMP, ABTS, 2-methoxy-1,4-benzohydroquinone (MBQH2), and DBQH2. The production of the ABTS cation radical, MBQ, and DBQ were estimated at 436 nm (
= 29,300 M-1 cm-1), 360 nm (
= 1,252 M-1 cm-1), and 397 nm (
= 562 M-1 cm-1), respectively. These reactions were performed in 0.1 M tartrate buffer (pH 3).
Transformation of nonphenolic compounds by C. rigida laccases.
The reactions were carried out in 100 mM tartrate buffer (pH 5) and contained 150 µM concentrations of either 3,4-dimethoxyphenylacetic (homoveratric) acid (HVA) or veratryl alcohol (as nonphenolic lignin model compounds), 150 µM ABTS (as laccase mediator), and 25 mU of laccase ml-1 (estimated with 5 mM ABTS in the same buffer). Samples were taken periodically, the pH was lowered to 2 with 7.4 M H3PO4, and the samples were frozen (-20°C) until analysis. Quantitative determination of HVA, veratryl alcohol, and veratraldehyde was performed by high-pressure liquid chromatography with standard calibration curves for each compound. Reaction samples (20 µl) were injected into a Spherisorb S5ODS2 C18 column (Hichrom) heated at 40°C, with 10 mM phosphoric acid-methanol (70/30) as a mobile phase and a 1-ml min-1 flow rate. The UV detector was operated at 280 nm. The reaction blanks contained heat-denatured laccase.
Oxygen activation and Fe3+ reduction.
Oxygen activation during the oxidation of 100 µM MBQH2 by 25 mU of purified laccase isoenzymes ml-1 (estimated with 500 µM MBQH2 in 20 mM phosphate buffer [pH 5]) was evaluated after full hydroquinone oxidation (which was followed at 360 nm) as both H2O2 and ·OH production. H2O2 was estimated by the oxidation of phenol red by horseradish peroxidase (20). Before the addition of phenol red, samples were heated at 90°C for 20 min to inactivate laccase (a treatment that does not change the H2O2 concentration). Enzyme inactivation was required because phenol red was oxidized by both laccase isoenzymes (see below). ·OH production was estimated as the formation of TBA-reactive substances (TBARS). In this case, MBQH2 was oxidized by laccase in the presence of 200 to 220 µM Fe3+-EDTA (freshly prepared) and 2.8 mM deoxyribose. TBARS were determined at the end of laccase reaction as described by Gutteridge (23). The composition of the laccase reaction for Fe3+ reduction studies was the same as that used for ·OH production, except that deoxyribose was replaced by 1.5 mM 1,10-phenanthroline. Formation of Fe2+-phenanthroline chelate was determined spectrophotometrically (
510 = 12,110 M-1 cm-1) (2). The reaction blanks for H2O2, TBARS, and Fe2+-phenanthroline determinations contained heat-denatured laccase.
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FIG. 1. Time course of laccase activity ( ), protein ( ), and reducing sugars (RS) ( ) in the extracellular fluid of C. rigida cultures grown in the absence and presence of copper (open and closed symbols, respectively). The results shown are from one experiment typical of four.
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TABLE 1. Purification of laccase isoenzymes from C. rigida
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FIG. 2. Purification of copper-induced laccases from C. rigida by chromatography on a Q-Cartridge (A), Superdex 75 (B), and Mono-Q (C). Absorbance at 280 nm (solid line), the NaCl gradient (dashed line), and the laccase activity ( ) are as indicated.
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FIG. 3. Estimation of the molecular mass and pI of laccase isoenzymes from C. rigida. (A), SDS-PAGE of LacI (lane b), deglycosylated LacI (lane c), LacII (lane d), deglycosylated Lac II (lane e), and low-molecular-mass Bio-Rad standards (lane a). (B), Isoelectric focusing of LacI (lane a) and LacII (lane b).
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FIG. 4. Absorption spectrum of LacI and LacII from C. rigida. The protein concentration was 7.58 nM (considering a molecular mass of 66 kDa).
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TABLE 2. Substrate specificity of C. rigida laccases
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TABLE 3. Kinetic constants of laccase isoenzymes from C. rigidaa
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FIG. 5. Transformation of HVA (A) ( ) and veratryl alcohol (B) ( ) into veratraldehyde ( ) by the laccase-ABTS system. The results shown correspond to LacI experiments (no significant differences were observed with LacII) and are the means of three replicates (standard deviations were <10% of the value of the point with which they were associated).
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4 MBQ·- + 2 H2O) reduced O2 to O2·-(MBQ·- + O2
MBQ + O2·-), we measured the effect of SOD and Mn2+ on quinone production rate. We found that the catalysis of O2·- dismutation by SOD (O2·- + 2 H+
O2 + H2O2) and the reduction of O2·- by Mn2+ (O2·- + Mn2+ + 2 H+
H2O2 + Mn3+) enhanced quinone production rate 1.4 and 2.9 times, respectively (Fig. 6A). The concentration of H2O2 after full oxidation of MBQH2 in the absence of any factor promoting semiquinone autoxidation was 8.3 µM (Fig. 6B, control experiment). In the presence of SOD and Mn2+, H2O2 levels increased 4.5 and 7.3 times, respectively. H2O2 production was confirmed with catalase, which decreased H2O2 concentration to negligible values.
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FIG. 6. Effect of different metal ions and activated oxygen species scavengers on the production rate of quinone (A), H2O2 production (B), Fe3+ reduction (C), and TBARS generation (D) during the oxidation of MBQH2 by LacI and LacII. Except for quinone production rate determination experiments (A), which were performed with 500 µM MBQH2, all of the reactions contained 100 µM MBQH2 and 25 mU of laccase ml-1 (measured with 500 µM MBQH2). In addition, in panel C the reaction mixtures contained Fe3+-EDTA and 1,10-phenanthroline, and in panel D the reaction mixtures contained Fe3+-EDTA and 2-deoxyribose. Where indicated, 100 U of SOD ml-1, 100 µM Mn2+, 100 to 110 µM Fe3+-EDTA, 100 U of catalase ml-1, 20 µM H2O2, and 5 mM mannitol also were present in the reactions. The results shown are those obtained with LacI, the differences found with LacII not being significant. The error bars represent ±95% confidence limits.
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Fe3++ ·OH + OH-), Fe3+ reduction was first investigated. Between O2·- and semiquinone radicals, the latter are the main agents reducing Fe3+ (MBQ·- + Fe3+
MBQ + Fe2+) during the oxidation of MBQH2 by P. eryngii laccase (19). Fe3+-EDTA increased the quinone production rate (Fig. 6A), suggesting that the reaction of Fe3+-EDTA with semiquinone radicals was taking place. The production of Fe2+-phenanthroline complex confirmed the existence of this reaction (Fig. 6C). Promotion of semiquinone autoxidation by SOD and Mn2+ decreased Fe2+-phenanthroline levels 14 and 18%, respectively. Finally, production of TBARS from deoxyribose, evidencing ·OH generation, was demonstrated (Fig. 6D). The presence of SOD and Mn2+ increasing H2O2 levels (Fig. 6B) exerted a positive effect on TBARS production (2.3-fold increase). Similar results were obtained with exogenous H2O2 (twofold increase). In contrast, catalase and the ·OH scavenger mannitol exerted the opposite effect (5.4- and 2.5-fold decreases, respectively). |
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Compared with other fungal laccases, the characteristics of purified C. rigida laccases are typical. Most laccases are monomeric glycoproteins showing a molecular mass of between 50 and 80 kDa (49, 52). The pI of C. rigida laccases (pH 3.9) are in the acidic range reported for laccases from other white rot fungi, including P. eryngii and P. ostreatus (pI 2.9 to 4.7) (38, 41) and Pycnoporus cinnabarinus (pI 3.7) (16). The N-terminal sequence of C. rigida laccases shows identities of >70% with those from Trametes trogii laccase (80%) (GenBank accession number AJ294820), basidiomycete PM1 (76%) (10), T. versicolor laccase II (72%) (6), Trametes villosa laccase 1 (72%) (53), and Pycnoporus cinnabarinus (71%) (16), whereas it is quite different from those of other white rot fungi such as Pleurotus eryngii lacase II (31%) (38) and Agaricus bisporus Lcc1 and Lcc2 (28 and 24%, respectively) (44). As expected for laccase-like enzymes, both C. rigida isoenzymes have no activity toward tyrosine and have a wide substrate specificity oxidizing several hydroxy- and methoxy-substituted phenols and aromatic amines. One unusual characteristic of these laccases was their ability to oxidize phenol red, a compound that is not oxidized usually by laccases because of its comparatively high redox potential. According to Eggert et al. (16), the absence of peroxidases in white rot fungi could select for laccases with higher redox potential.
The participation of C. rigida laccases in the oxidation of nonphenolic compounds, the production of partially reduced oxygen species, and the oxidation of Mn2+ all required the presence of adequate laccase substrates. To study the oxidation of the nonphenolic lignin model compounds HVA and veratryl alcohol, we used ABTS as a laccase mediator (4). Our results (Fig. 5) are similar to those reported for P. eryngii laccase and show that the laccase-ABTS pair catalyzed first the C
-Cß cleavage of HVA and then the conversion of veratryl alcohol into veratraldehyde (35). The laccase-ABTS pair is an efficient system for the demethylation and delignification of Kraft pulp (5), the transformation of polycyclic aromatic hydrocarbons (12), and the decolorization of synthetic dyes (51).
We showed the reduction of O2 by C. rigida laccases giving rise to H2O2 and ·OH production by using MBQH2 as substrate (Fig. 6). These results confirm the involvement of laccase in oxygen activation, which has been described only in studies of the P. eryngii laccase (19, 22). In this setting, the semiquinone radicals produced by laccase act as reducing agents of both O2 and Fe3+. Once O2·- and Fe2+ are formed, stepwise reduction of the former by either O2·- (dismutation reaction) or Mn2+ and then by Fe2+ generates H2O2 and subsequently ·OH. We infer the oxidation of Mn2+ by laccase-MBQH2 system from the increases in quinone production rate and H2O2 levels in the presence of Mn2+ (Fig. 6A and B, respectively). The reduction of Fe3+ and the oxidation of Mn2+ by low-molecular-weight agents, such as semiquinone and O2·- radicals, is important in the early stages of lignocellulose degradation, since the enzymes directly catalyzing these reactions (cellobiose dehydrogenase and peroxidases, respectively) cannot access these metals in lignocellulose due to steric hindrance (18). The production of ·OH by laccase suggests novel uses for this enzyme and also for white rot fungi for the degradation of organopollutants. Hydroxyl radicals are an important component of many oxidation processes that mineralize various toxic organic compounds (27).
This work has been partially funded by the European Contract QLK3-99-590. M.C.N.S. thanks CONICET (Argentina) for the financial support.
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