Previous Article | Next Article ![]()
Applied and Environmental Microbiology, June 2002, p. 2660-2665, Vol. 68, No. 6
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.6.2660-2665.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Division of Industrial Microbiology,1 Subdepartment of Environmental Technology, Wageningen University, 6700 EV Wageningen,3 Laboratory of Biochemistry, Wageningen University, 6700 HB Wageningen,2 Department of Environmental Biotechnology, TNO Environment, Energy and Process Innovation, Apeldoorn, The Netherlands4
Received 7 December 2001/ Accepted 6 March 2002
|
|
|---|
|
|
|---|
It has been assumed that soil bioremediation of BTEX pollution relies upon indigenous bacterial populations; the significance of fungi has been overlooked (4). Fungi generally withstand harsher environmental conditions than bacteria and could play an important role in the degradation of petroleum hydrocarbons in the soil (3). Nevertheless, fungal degradation of BTEX mixtures has been studied only to a limited extent with white-rot fungi (5, 22). BTEX were mineralized but did not support fungal growth when they were supplied as the sole source of carbon and energy. The extracellular lignin-degrading enzymes are capable of oxidizing a wide range of aromatic hydrocarbons, but they appear not to be involved in BTEX degradation. The low degradation rates and the requirement of an additional carbon source limit the use of white-rot fungi in bioremediation. Interestingly, new non-white-rot fungal strains have been isolated and used successfully for biofiltration of air contaminated with volatile aromatic hydrocarbons (i.e., toluene and styrene), which were metabolized as sole carbon and energy sources (7, 8, 17). When hydrocarbon-degrading microbes are used for bioremediation of gasoline pollution, it is very unlikely that they encounter a sole substrate. Some papers dealing with substrate interactions during degradation of BTEX mixtures by bacteria have been published (1, 6, 9, 10, 16), but analogous data for fungi are still very scarce.
The objective of the present study was to investigate the pattern of degradation of BTEX mixtures by a fungus capable of growth on aromatic hydrocarbons. The deuteromycete Cladophialophora sp. strain T1 (= ATCC MYA-2335), which grows on toluene, was selected as a model fungus. This strain was isolated previously from a BTEX-polluted soil and showed the best degradative capacity in terms of substrate specificity among the fungal isolates examined (17). Special attention was paid to the kinetics of utilization of multiple substrates and to the extent of degradation of every BTEX component. This information is important for devising fungus-based techniques for treatment of BTEX pollution, especially under solid state-like environmental conditions, such as those in air biofilters or acidic soils, which usually favor fungal growth over bacterial growth (3, 17).
|
|
|---|
Fungal strain.
Cladophialophora sp. strain T1 (= ATCC MYA-2335) was isolated as previously described (17). During the present investigation this organism was routinely maintained at 4°C on mineral medium (11) agar slants supplemented with 2% glucose.
Growth experiments.
Tests were performed in 250-ml Boston flasks containing 25 ml of buffered (35 mM K2HPO4, NaH2PO4·2H2O; pH 7) mineral salts medium (11) and sealed with Teflon-coated valves (Mininert; Phase Separations, Waddinxveen, The Netherlands). BTEX compounds were added as the sole carbon and energy source. After water-air substrate equilibration, flasks were inoculated with a fungal spore suspension containing approximately 104 viable spores. Incubation was performed at 25°C under static conditions. Growth was monitored by gas phase measurement of substrate consumption and CO2 production compared with substrate consumption and CO2 production in noninoculated controls. The concentration of BTEX in the water phase was calculated by using previously reported water-air partition coefficients (2, 14). Cometabolic degradation of the BTEX compounds that individually did not support growth was assayed by using combinations of these compounds with toluene. The carbon recovered as CO2 (C-CO2) and the carbon recovered as biomass (C-biomass) were determined after substrate exhaustion, and the values were corrected by using control flasks inoculated and incubated with no carbon source. The pH of the medium was checked at the end of incubation for adjustment of the water-air partition of CO2, but no significant variations were observed. The biomass was collected by filtration, and the dry matter content was determined. C-biomass was calculated by assuming that 26 g (dry weight) contains approximately 1 mol of carbon (21). The culture filtrate was stored at -20°C for identification of metabolites. Carbon mass balance experiments were performed for both cultures and controls in triplicate.
Identification of intermediates.
The filtrate from the cultures described above was thawed and divided in two 5-ml portions. The first fraction was freeze-dried under a vacuum, and the residue was redissolved in 1 ml of deuterium oxide; the second fraction was extracted with deuterated chloroform (1 ml). Both extracts were analyzed by proton nuclear magnetic resonance (1H NMR). Products of BTEX conversion were identified by comparing their 1H NMR chemical shift values with those of authentic reference compounds, when they were commercially available, and by performing two-dimensional NMR experiments with nuclear Overhauser spectroscopy (12).
Degradation kinetics.
A toluene-grown liquid culture of fungal strain T1 was prepared and harvested as described elsewhere (17). Cells were resuspended in 25 ml of phosphate buffer (50 mM, pH 7) and incubated in 250-ml Boston flasks sealed with Teflon valves (120 rpm, 25°C). The apparent half-saturation constant (Km) for degradation of BTEX was determined from the substrate depletion curves. From these data points, the specific substrate consumption rates were calculated at different concentrations and fitted to a Lineweaver-Burk plot. The maximum biodegradation rate (Vmax) was calculated by linear regression of the data points for which the substrate concentration was more than five times higher than the Km value. The amount of biomass was set for every substrate (between 1 and 6 g [dry weight] liter-1) in order to obtain a biodegradation activity below the rates of mass transfer between the gas and aqueous phases for BTEX, as reported previously for a similar batch system (6). BTEX adsorption onto the biomass was determined in additional batches containing heat-inactivated (25 min, 120°C) cells.
Analytical methods.
BTEX and CO2 contents were determined by injecting 100-µl headspace samples into an HP 6890 Series gas chromatograph (Hewlett-Packard). For BTEX, the stationary phase used was a 10% SE-30 Chromosorb WMP column (Chrompack B.V., Middelburg, The Netherlands). The carrier gas was nitrogen at a flow rate of 1.9 ml min-1. The temperatures of the column and the flame ionization detector were 110 and 300°C, respectively. A CP-Wax 52CB column (Chrompack B.V.) at a temperature of 50°C was used to resolve mixtures of ethylbenzene and the three xylene isomers. For CO2 a CP-Poraplot Q column (Chrompack B.V.) and a thermal conductivity detector were used. Helium at a flow rate of 3.0 ml min-1 was the carrier gas. The column and detector temperatures were 70 and 250°C, respectively. 1H NMR measurements were obtained with a Bruker AMX 500-MHz NMR spectrometer. The sample volume was 0.5 ml, and the temperature used for measurement was 23°C. Biomass dry weight was determined after cell suspensions were filtered and dried (24 h, 105°C) with glass fiber paper with >1-µm retentivity (Schleicher & Schuell, Dassel, Germany). The filters were previously rinsed with demineralized water, dried, and weighed.
|
|
|---|
0.98) equivalent to a doubling time of 2.5 days (Fig. 1C).
![]() View larger version (21K): [in a new window] |
FIG. 1. (A) Degradation of a mixture of benzene ( ), toluene ( ), ethylbenzene (), and xylenes ( ) by a batch culture of the fungus Cladophialophora sp. strain T1 incubated at 25°C. (B) Degradation curves for the xylene isomers o-xylene ( ), m-xylene ( ), and p-xylene ( ). (C) Production of CO2 (+) during growth compared with production of CO2 in inoculated controls incubated without BTEX (x).
|
|
View this table: [in a new window] |
TABLE 1. Carbon mass balance after growth of Cladophialophora sp. strain T1 on single compounds and binary combinationsa
|
|
View this table: [in a new window] |
TABLE 2. 1H NMR chemical shift values and coupling constants of metabolites formed from xylene degradationa
|
![]() View larger version (16K): [in a new window] |
FIG. 2. Effects of benzene ( ), ethylbenzene (), o-xylene ( ), m-xylene ( ), and p-xylene ( ) added at different concentrations in combination with toluene (0.3 mM) on the growth of Cladophialophora sp. strain T1. Growth was characterized by determining the rate coefficient of CO2 production at 25°C (n 5, r2 0.98). When present, error bars indicate the standard deviation based on three independent experiments.
|
|
View this table: [in a new window] |
TABLE 3. Michaelis-Menten kinetic parameters for the degradation of toluene, ethylbenzene, and xylenes by toluene-grown cells of Cladophialophora sp. strain T1, as measured in batch incubation preparations (120 rpm, 25°C)
|
![]() View larger version (15K): [in a new window] |
FIG. 3. Lineweaver-Burk plot from toluene depletion curves for cells of Cladophialophora sp. strain T1 incubated with toluene as the only substrate ( ) and together with 0.1 mM o-xylene ( ), m-xylene ( ), or p-xylene ( ) (25°C, r2 0.98). The kinetic parameters (Vmax and Km) are given in the text.
|
|
|
|---|
The Michaelis-Menten model provided a good description of the degradation kinetics in batch experiments in which whole cells were used. The specific affinity (Vmax/Km) obtained for every individual BTEX component was consistent with the degradation pattern seen in a complex BTEX mixture, where toluene and ethylbenzene were consumed preferentially, followed by o- and m-xylenes and finally p-xylene, which was hardly degraded. Comparisons of the Km values for degradation of toluene, alone and in combination with a second substrate, suggest that competitive inhibition is the main substrate interaction. Competition for substrates that, like o- and m-xylenes, led to neither carbon assimilation nor energy-yielding reactions consequently resulted in growth inhibition (Fig. 2). Strong competition might induce a sequential pattern for the utilization of the different substrates, a phenomenon usually referred as diauxie, which makes treatment of mixtures in a continuous system difficult. Diauxie during BTEX degradation has been described, for example, for a Rhodococcus strain (9), where the presence of ethylbenzene blocked degradation of any additional substrate. In our study, sequential degradation of p-xylene (in combination with toluene) was observed, but for all other toluene, ethlybenzene, and xylene components a certain degree of simultaneous uptake occurred (Fig. 1).
As reported in our previous study on the assimilation of toluene by Cladophialophora sp. strain T1, toluene is first hydroxylated to benzyl alcohol and subsequently converted to benzoic acid, prior to hydroxylation and cleavage of the aromatic ring (18). Here we have shown that o- and m-xylenes were also oxidized at the side chain to form dibenzoic acids, which were not metabolized further. Considering in addition the likely competitive nature of utilization of multiple substrates, we propose that fungal strain T1 oxidizes the alkylated compounds (toluene, ethylbenzene, and xylenes) at the alkyl side chain via the same monooxygenase enzyme. This conclusion explains the immediate degradation of ethylbenzene and the xylenes observed with toluene-grown mycelia. Conversely, the toluene degradation capacity needs to be induced in glucose-grown mycelia (data not shown). According to this view, the metabolism of benzene requires a very different enzymatic mechanism, apparently absent in our fungus, which is capable of performing the initial oxidation at the aromatic ring.
The results described in this report suggest that fungi with the ability to grow on aromatic hydrocarbons might contribute significantly to bioremediation of BTEX pollution. At present, a great deal of attention in the field of fungal bioremediation is being paid to the development of fungal biofilters for the treatment of polluted air (7). In relation to this, the low Km of Cladophialophora sp. strain T1 for degradation of toluene, ethylbenzene, and xylene makes this organism very suitable for treatment of toluene, ethylbenzene, and xylene vapors. The Km values reported here (Table 3) are equivalent to air concentrations below the recommended threshold limit values for exposure to toluene, ethylbenzene, and xylene (2). Considering the similarities between air biofiltration and soil bioventing, fungi could also be used to enhance bioremediation of polluted soil. The lack of benzene degradation appears to be the main drawback for application of our strain. Nevertheless, taking into account the high microbial diversity for metabolism of BTEX and the environmental variability of field conditions, effective bioremediation is most likely to rely on a consortium of organisms rather than on the action of a single microorganism. In support of this hypothesis, an earlier study showed that there is synergism between fungi and bacteria for mineralization of aromatic hydrocarbons in an acidic soil (20). In this study we have shown that soil fungi possess a metabolic capacity for degradation of BTEX similar in many aspects to that of bacteria. Fungi thus should not be ignored in the development of more efficient bioremediation strategies.
We acknowledge Nadia Nikolova (Bourgas University, Bourgas, Bulgaria) for performing some of the preliminary experiments.
|
|
|---|
This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2009 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»