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Applied and Environmental Microbiology, July 2002, p. 3486-3495, Vol. 68, No. 7
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.7.3486-3495.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Willem van Schaik,1,2 Tjakko Abee,1,2* and Jeroen A. Wouters1,2,
Wageningen Center for Food Sciences,1 Laboratory of Food Microbiology, Wageningen University, 6703 HD Wageningen, The Netherlands2
Received 13 December 2001/ Accepted 19 April 2002
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Bacteria have evolved adaptive networks to face the challenges of a changing environment and to survive under conditions of stress (1). An initial nonlethal heat dose can induce transient resistance to subsequent heat treatment, a phenomenon termed thermotolerance. Heat-induced thermotolerance has been studied in several food pathogens, such as Listeria monocytogenes (28) and B. cereus (23). For both psychrotrophic and mesophilic B. cereus variants, increased thermotolerance at 50°C is observed after incubation under mild heat conditions (37 or 40°C for several hours). Several proteins were induced during heat pre-exposure, but these were not identified (23). The mechanisms of heat adaptation and the production of heat-induced proteins have not been studied in B. cereus.
In a wide variety of bacteria, the heat shock response includes increased synthesis of a set of conserved heat shock proteins (HSPs) (41). The molecular genetics of the heat shock response has been most extensively studied in Escherichia coli and B. subtilis (14, 41). Classical HSPs are the molecular chaperones (e.g., DnaK, GroEL, and their cohorts) or ATP-dependent proteases (e.g., ClpP). These proteins play roles in protein folding, assembly, and repair and prevention of aggregation under stress and nonstress conditions. The chaperones and proteases act together to maintain quality control of cellular proteins (11). The B. subtilis heat-inducible genes are divided into four different classes based on their regulatory mechanisms (8, 14). Class I genes encode classical chaperones such as DnaK, DnaJ, GroES, and GroEL, the expression of which involves a highly conserved CIRCE (controlling inverted repeat of chaperone expression) operator sequence, which is the binding site for the HrcA repressor. Class II genes are induced by both heat and other stresses, such as salt or ethanol. Expression of these genes is regulated by the alternative sigma factor
B. Class III genes form part of the CtsR stress response regulon and include genes encoding the ClpP protease and two ATPases, ClpC and ClpE. Class IV genes are devoid of regulation by the CIRCE operator sequence and
B, as well as CtsR, and the regulation of these genes remains to be elucidated. This group includes, among others, the genes encoding the ClpX ATPase and FtsH (8, 14). Recent DNA microarray experiments with B. subtilis revealed that more than 100 genes are heat induced (15). In addition, array experiments on
B-regulated genes indicated that approximately 100 genes belong to this regulon and that these genes are involved in a variety of cellular processes, including protective processes, (post)transcriptional regulation, solute influx and efflux, and carbon metabolism (29, 30).
For several bacteria, it has been observed that stress exposures other than heat, such as exposure to ethanol, acid, or oxidative stress or during macrophage survival, might result in increased thermotolerance. Several HSPs are also induced under these conditions (1, 2, 3, 41). Common regulatory pathways might be responsible for the production of HSPs under different stress conditions, and in B. subtilis and Staphylococcus aureus, for example, a central role in these processes is thought to be played by
B (7, 14). Understanding cross-adaptation to different stresses and the involvement of stress proteins during these exposures might be instrumental in optimizing processing conditions to guarantee the microbial safety of food products (5). Another important applicative aspect of the heat shock response is the observation that B. subtilis cells pre-exposed to mild heat produce spores that are more heat stable. (26). Understanding the heat-adaptive response of vegetative cells might also shed light on the mechanism of heat resistance of spores.
In this report, we provide evidence for a heat-protective response in B. cereus ATCC 14579. By using a proteomics approach, we observed the production of heat shock proteins. A reference map of the protein components of B. cereus was generated, and a group of 31 HSPs was identified. The role of these proteins in heat adaptation is discussed.
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Viability and thermotolerance of B. cereus exposed to different stresses.
B. cereus cells, cultured at 30°C, were pre-exposed to mild heat treatment at 42°C for 0, 7.5, 15, 30, 60, 120, or 240 min, after which their thermotolerance at 50°C was determined. Cultures in the mid-exponential growth phase (optical density at 600 nm, 0.5), grown at 30°C, were harvested by centrifugation (3,000 x g, 10 min), resuspended in preheated BHI medium, and kept at 42°C for the above-mentioned time periods. Consecutively, cells were exposed to 50°C and viable counts were measured after 0, 5, 10, 15, 20, and 25 min of exposure. For all heat exposures, three independent experiments were performed and samples were plated in duplicate for each time point. The heat tolerance of cells pre-exposed to the following other stresses was also assessed: low temperature (7°C for 2 h), salt upshock (additional 2.5% [wt/vol] NaCl at 30°C for 30 min), low pH (pH 5 adjusted with lactic acid at 30°C for 30 min), and the presence of ethanol (4% [vol/vol] ethanol at 30°C for 30 min). The heat sensitivity of cells pre-exposed to these stresses was analyzed in BHI medium as described above. The pre-exposures to heat or other stresses were also performed in the presence of chloramphenicol (100 µg ml-1) to inhibit de novo protein synthesis.
Protein extraction from B. cereus.
Total cellular protein extractions were performed essentially as described by Wouters et al. (38). For each sample, 10-ml cultures were concentrated and, consecutively, cells were disrupted by bead beating with an MSK cell homogenizer (B. Braun Biotech International, Melsungen, Germany) and zirconium beads (0.1-mm diameter; Biospec Products, Bartlesville, Okla.) six times for 1 min (with cooling on ice between treatments). Subsequently, proteins in the homogenate were analyzed by Western blotting and two-dimensional gel electrophoresis (2D-E). The protein concentration in cell extracts was determined by using the bicinchoninic acid assay (Sigma Chemical Co., St. Louis, Mo.).
Western blotting.
Protein extracts (40 µg) were separated by using sodium dodecyl sulfate-12.5% polyacrylamide gels in a Criterion II vertical electrophoresis system (Bio-Rad, Richmond, Calif.) with a molecular size standard containing proteins of 94, 67, 43, 30, 20, and 14 kDa. After electrophoresis, proteins were electroblotted at 100 V on nitrocellulose membranes (Bio-Rad) and blocked with 0.1% sodium caseinate. Blots were then incubated with either GroEL, GroES, DnaK, DnaJ, ClpC, ClpP, ClpX, or FtsH rabbit antibodies raised against these proteins of B. subtilis. The antibodies were generous gifts of W. Schumann, University of Bayreuth, Bayreuth, Germany (GroEL, DnaK, DnaJ, and FtsH); K. Turgay, Albert-Ludwigs-Universität, Freiburg, Germany (ClpC); and U. Gerth, Ernst-Moritz-Arndt-Universität, Greifswald, Germany (ClpP and ClpX). Immunocomplexes were incubated with goat anti-rabbit peroxidase and visualized with 3,3'-diaminobenzidine tetrahydrochloride.
Protein analysis by 2D-E.
Protein analysis was performed with a Multiphor 2D-E system (Pharmacia Biotech, Uppsala, Sweden) as described previously (38). Equal amounts of protein (50 µg) were separated on isoelectric-point gels at pI 4 to pI 7 and subsequently on homogeneous sodium dodecyl sulfate-12 to 14% polyacrylamide gels (Pharmacia Biotech). The gels were silver stained as described by Blum et al. (4). The experiments were performed in duplicate or triplicate, and representative gels are shown. The gels were analyzed, integrated, and normalized by using PD-Quest software (Bio-Rad). Induction factors for each heat-induced protein were calculated as the ratio of the normalized spot values in a stress gel to those in the control gel.
Determination of N-terminal amino acid sequences.
For determination of the N-terminal amino acid sequences of specific spots, protein samples (1.5 mg) were separated on the 2D-E gels under conditions identical to those used for the running of analytical gels. The proteins were blotted on a polyvinylidene difluoride membrane optimized for protein transfer (Amersham Life Science, Buckinghamshire, England) with a Trans-Blot unit in accordance with the instructions of the manufacturer (Bio-Rad) and stained with Coomassie brilliant blue. Protein spots were cut from the blot and subjected to consecutive Edman degradation and subsequent analysis with the model 476A Protein Sequencing System (Applied Biosystems, Foster City, Calif.) at the Sequence Center, University Utrecht (Utrecht, The Netherlands). By using BlastP and the B. cereus ATCC 14579 genome sequence database (Integrated Genomics, Chicago, Ill.; www.integratedgenomics.com), the derived N termini were screened for sequence similarities.
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FIG. 1. Effect of mild heat treatment on the survival of B. cereus ATCC 14579 at 50°C. (A) Survival (log number of cells [N] per milliliter) of exponential-phase control cells grown at 30°C (circles) and that of cells pretreated for 7.5 (squares) and 15 (triangles) min at 42°C in the absence and presence of chloramphenicol (closed and open symbols, respectively). (B) Survival, after 20 min at 50°C, of mid-exponential-phase B. cereus ATCC 14579 cells pretreated at 42°C for 0, 7.5, 15, 30, 60, 120, and 240 min.
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FIG. 2. (A) Western blot analysis of HSP (GroEL, DnaK, DnaJ, ClpC, ClpP, ClpX, and FtsH) production in B. cereus. Cells were grown to mid-exponential phase at 30°C (control) and exposed to mild heat treatment (42°C) for 7.5 and 15 min (m) in the absence and presence of chloramphenicol (cm). (B) Schematic representation of the gene clusters encoding the analyzed HSPs in B. cereus (black arrows) and proteins homologous to heat-induced proteins in B. subtilis (white arrows; HrcA, GrpE, the transcriptional regulator YacB, the redox regulated chaperone YacC, and CtsR), which were not found to be heat induced in B. cereus in our study. For each gene, the percent identity to the B. subtilis homologs and the molecular mass of the encoded protein are indicated. The CIRCE sequence preceding the gene encoding HrcA is indicated by two vertical lines.
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FIG. 3. 2D-E of extracts of exponential-phase B. cereus cells grown at 30°C and after mild heat treatment (42°C) for 15 min, 1 h, and 4 h. Molecular masses (in kilodaltons) of marker bands (right side) and pI ranges (bottom) are indicated. Heat-induced proteins are boxed and numbered (see also Tables 1 and 2).
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TABLE 1. Induction factorsa of heat shock proteins of B. cereus ATCC 14579
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TABLE 2. List of identified heat shock proteins of B. cereus ATCC 14579
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FIG. 4. Effect of pre-exposure to stress on survival of B. cereus cells at 50°C. Survival (log number of cells [N] per milliliter) of exponential-phase control cells grown at 30°C (circles) and that of cells pretreated for 30 min at 30°C with 2.5% NaCl (open squares), 4% ethanol (open triangles), and pH 5 (closed triangles) and cells preincubated at 7°C for 2 h (closed squares).
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FIG. 5. Western blot analysis of HSP (GroEL, DnaK, DnaJ, ClpC, ClpP, ClpX, and FtsH) production in B. cereus. Cells were grown to mid-exponential phase at 30°C (column 1) and exposed to mild heat (42°C, 15 min) (column 2), a low temperature (7°C, 2 h) (column 3), 2.5% NaCl (30°C, 30 min) (column 4), 4% ethanol (30°C, 30 min) (column 5), or pH 5 (30°C, 30 min) (column 6).
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FIG. 6. 2D-E of extracts of B. cereus cells exposed to 2.5% NaCl, 4% ethanol, or pH 5 for 30 min at 30°C or to a low temperature (7°C) for 2 h. Molecular masses (in kilodaltons) of marker bands (right side) and pI ranges (bottom) are indicated. HSPs are boxed and numbered. Proteins typically induced by exposure to a stress other than heat are boxed and lettered in each panel for the respective stress conditions.
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Several of the proteins identified belong to the group of chaperones (DnaK and GroEL) and proteases (ClpP) that have been described in great detail in other microorganisms (for reviews, see references 11 and 41). The induction of proteins of this type forms a highly conserved response to heat stress, and their induction by heat in B. cereus confirms their universal importance in stress adaptation. Other chaperones that are heat induced in B. cereus are HSP16.4, PpiB, YloH, CspB, and CspE. HSP16.4 is a member of the small heat shock protein (Hsp20) family and shows the greatest homology to a family of this type of proteins in the lactic acid bacterium Streptococcus thermophilus (34). PpiB is a peptidyl-prolyl cis-trans isomerase that can catalyze the refolding of proteins in B. subtilis. Although the disruption of ppiB in B. subtilis did not increase the sensitivity of the cells to heat stress, it is upregulated during heat shock (10). YloH is the omega subunit of RNA polymerase, and it has recently been shown to enhance the in vitro reconstitution of E. coli core RNA polymerase (9). YloH might act as a core RNA polymerase-specific chaperone that counters the core enzyme destabilization caused by elevated temperatures. To our knowledge, this is the first example of stress induction of the omega subunit of RNA polymerase, possibly suggesting a role for YloH in stress adaptation of the transcription machinery. Finally, in this chaperone family, two cold shock proteins, CspB and CspE, were induced upon heat stress. CspB and CspE have been described in Bacillus weihenstephanensis WSBC10201 and were only mildly induced upon cold shock (25), which is in agreement with our observations. Cold shock proteins are believed to act as RNA chaperones under low-temperature and other stress conditions (39). Here we show that CspB and CspE of B. cereus are induced during heat shock and osmotic or ethanol shock, respectively.
Within the group of B. cereus HSPs, we found several homologs to stress proteins. A protein with a possible role in protection of the cell against oxidative oxygen species is the thioredoxin TrxA. Thioredoxins are small, heat-stable proteins, and in B. subtilis, thioredoxin is induced under several stress conditions. Thioredoxin has multiple functions: it can serve as a hydrogen donor, it has been implicated in the formation of disulfide bonds in proteins, and it may be involved in the defense against oxidative stress (17, 32). Interestingly, the important regulatory protein RsbV is also induced by heat shock. RsbV is the anti-sigma factor antagonist of the alternative sigma factor
B, and its upregulation suggests the activation of
B under these conditions in B. cereus. Next, SodA is a superoxide dismutase that is highly homologous to superoxide dismutases from other members of the family Bacillaceae. This enzyme not only plays a role in protecting vegetative cells from reactive oxygen species but is also important in sporulation, as it is involved in the assembly of the insoluble matrix of the spore (16, 18). Finally, the role of the general stress protein YflT is unclear. It is also upregulated under heat shock conditions in B. subtilis (37).
Apart from SodA, two other HSPs of B. cereus have a potential role in sporulation. Firstly, AldA is homologous to the Ald protein in B. subtilis, which catalyzes the deamination of alanine to pyruvate and ammonia and is required for normal sporulation. The generation of pyruvate by this mechanism may be a source of energy during the sporulation process (33). SpoVG is involved in sporulation as a negative regulator of the pathway leading to asymmetric septation. SpoVG is upregulated upon heat shock in B. subtilis, and this may function to block the sporulation process and favor the vegetative growth of cells (24).
The production of several proteins presumably involved in metabolic processes also increased at 42°C in B. cereus. FolD is a methylene-tetrahydrofolate dehydrogenase that is involved in the biosynthesis of essential cellular compounds such as purines, methionine, and histidine. Dra is the last enzyme in the cascade of the catabolism of deoxyribonucleosides and is thought to furnish the cells with an extra source of energy (31, 35). YbbT is homologous to a phosphoglucose mutase in B. subtilis that can be involved in the conversion of glucose 1-phosphate into glucose 6-phosphate in glycolysis. YbbT is also closely related (68% identity) to GlmM, a phosphoglucosamine mutase from S. aureus that is involved in peptidoglycan production and methicillin resistance (19, 40). Finally, the production of rod shape-determining protein MreB increased in B. cereus. MreB was identified in B. cereus ATCC 10987 by Narahara et al. (27) and was recently characterized as the bacterial homologue of actin (20, 36). In B. subtilis, this protein is essential as its deletion causes inflated morphology and, ultimately, cell lysis (20). The upregulation of MreB in B. cereus may be required for retention of the rod-shaped cell form under stress conditions.
On the basis of the time after which heat-activated production occurred, the B. cereus HSPs can be divided into three groups: I, increasing induction within the exposure time (up to 4 h); II, maximum induction after 15 min with a decrease to basic levels after 1 or 4 h; III, constant overproduction during heat exposure (15 min to 4 h). By analogy to B. subtilis, the grouping of the B. cereus HSPs might correlate to common regulatory features. Transient induction of
B-regulated genes and proteins in B. subtilis upon heat exposure has been observed (14, 15), which correlates to that of the B. cereus group II HSPs. Indeed, group II contains a regulator of
B, RsbV, which might point to
B-dependent expression of the genes in this group. In addition, two genes that are
B dependent in B. subtilis (trxA and ppiB; 14, 32) are found in this group. However, group III also contains some genes that are
B regulated in B. subtilis (yflT and sodA; 14, 29). Continuous production of the classical heat shock chaperones and proteases, such as GroEL and DnaK, upon heat exposure has been observed (correlating to groups I and III of the B. cereus HSPs). This might relate to regulation by HrcA via CIRCE elements. Indeed, close to the transcriptional start of the hrcA-grpE-dnaK-dnaJ operon, which encodes, among other proteins, DnaK (group III), a CIRCE element is present. GroEL, which is HrcA regulated in B. subtilis, also falls into the cluster of proteins the production of which increases during heat exposure (group I).
In relation to these regulatory phenomena, it is important to note that B. cereus ATCC 14579 developed cross-protection from heat after exposure to salt, a low pH, and ethanol, stresses in which common regulators may be involved. We also observed that the increase in the thermotolerance of B. cereus cells exposed to stresses other than heat is not solely protein synthesis dependent. An alternative or complementary mechanism can be the accumulation of compatible solutes or osmoprotectants that might function as thermoprotectants, as has been shown, for example, for glycine betaine in E. coli (6).
The increased use of mild heat preservation treatments and hurdle technology makes food products more susceptible to bacterial contamination than heavily processed foods. This development may have contributed to the reported rise in B. cereus-related food poisoning outbreaks in developed countries (21). Within the concept of hurdle technology, it is important to keep in mind that microorganisms can be more resistant to adverse conditions after a previous stress exposure and thus survive normally lethal conditions that occur during food processing. Here, we analyzed the initial responses of B. cereus to heat and other stresses. This will contribute to the further understanding of B. cereus adaptive mechanisms that may be applicable to food processing and cause increased survival of B. cereus during food processing. Even when more severe heat treatments or other preservation strategies are used, the understanding of the stress response of vegetative cells is of vital importance, as this process may lead to the generation of more resistant spores (26). In the development of cross-protection, key regulators, such as
B, are thought to play a central role. In future studies, we will characterize
B of B. cereus and study genes controlled by this sigma factor.
We gratefully acknowledge Wolfgang Schumman, Kuersad Turgay, and Uwe Gerth for the generous gift of antibodies. Integrated Genomics (Chicago, Ill.) is acknowledged for the use of the B. cereus genome sequence database.
Present address: Universidad Politécnica de Cartagena, Dpto. Ingeniería de Alimentos y del Equipamiento Agrícola, 30203 Cartagena, Spain. ![]()
Present address: Department Flavor, Nutrition and Ingredients, NIZO Food Research, 6710 BA Ede, The Netherlands. ![]()
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B controls the environmental stress response but not starvation survival or pathogenicity in a mouse abscess model. J. Bacteriol. 180:6082-6089.
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