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Applied and Environmental Microbiology, September 2002, p. 4315-4321, Vol. 68, No. 9
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.9.4315-4321.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Biotransformation of Eugenol to Ferulic Acid by a Recombinant Strain of Ralstonia eutropha H16
Jörg Overhage, Alexander Steinbüchel, and Horst Priefert*
Institut für Mikrobiologie der Westfälischen Wilhelms-Universität Münster, D-48149 Münster, Germany
Received 18 March 2002/
Accepted 11 June 2002

ABSTRACT
The gene loci
ehyAB,
calA, and
calB, encoding eugenol hydroxylase,
coniferyl alcohol dehydrogenase, and coniferyl aldehyde dehydrogenase,
respectively, which are involved in the first steps of eugenol
catabolism in
Pseudomonas sp. strain HR199, were amplified by
PCR and combined to construct a catabolic gene cassette. This
gene cassette was cloned in the newly designed broad-host-range
vector pBBR1-JO2 (pBBR1-JO2
ehyABcalAcalB) and transferred to
Ralstonia eutropha H16. A recombinant strain of
R. eutropha H16 harboring this plasmid expressed functionally active eugenol
hydroxylase, coniferyl alcohol dehydrogenase, and coniferyl
aldehyde dehydrogenase. Cells of
R. eutropha H16(pBBR1-JO2
ehyABcalAcalB) from the late-exponential growth phase were used as biocatalysts
for the biotransformation of eugenol to ferulic acid. A maximum
conversion rate of 2.9 mmol of eugenol per h per liter of culture
was achieved with a yield of 93.8 mol% of ferulic acid from
eugenol within 20 h, without further optimization.

INTRODUCTION
Vanillin (4-hydroxy-3-methoxybenzaldehyde) is the characteristic
aroma component of the vanilla pod and is used in a broad range
of flavors for foods, confectionery, and beverages; as a fragrance
ingredient in perfumes and cosmetics; and for pharmaceuticals.
The main production of vanillin is done via chemical synthesis
from guaiacol and lignin (
9). The increasing customer-led demand
for natural flavors has induced growing interest in producing
vanillin from natural raw materials by biotransformation, which
can then be regarded as a natural aroma chemical. This common
trend in the production of flavors and fragrances has recently
been reviewed (
6,
15,
17,
27,
29,
30). Since vanillin occurs
as an intermediate in the catabolism of phenolic stilbenes,
eugenol (4-allyl-2-methoxyphenol), ferulate (4-hydroxy-3-methoxycinnamate),
and lignin (
7,
33,
35,
36), these compounds are potential substrates
for biotransformation processes. A method for biotransformation
of eugenol to vanillin was developed by Rabenhorst and Hopp
(1991, patent application EP0405197), based on a new
Pseudomonas sp. strain, HR199, which degrades eugenol via coniferyl alcohol
(4-hydroxy-3-methoxycinnamyl alcohol), coniferyl aldehyde (4-hydroxy-3-methoxycinnamyl
aldehyde), ferulic acid, vanillin, vanillic acid (4-hydroxy-3-methoxybenzoate),
and protocatechuic acid (3,4-dihydroxybenzoate) (
28). The genes
involved in this conversion have been cloned (
1,
22,
24,
25,
26; A. Steinbüchel, H. Priefert, and J. Rabenhorst, 1998,
patent application EP0845532). However, by using the wild type
of strain HR199, no production of vanillin was observed. This
was due to further conversion of vanillin to vanillic acid.
Even the insertional inactivation of the
vdh gene, encoding
vanillin dehydrogenase in
Pseudomonas sp. strain HR199 with
an omega element, led to a strain that only transiently accumulated
vanillin during transformation of eugenol. The lack of vanillin
dehydrogenase was superimposed by the
calB-encoded coniferyl
aldehyde dehydrogenase, which also catalyzes the oxidation of
vanillin as a side activity (
23). Thus,
Pseudomonas sp. strain
HR199 and derivatives seemed not to be the most suitable candidates
for vanillin production. Other approaches were based on the
biotransformation of ferulic acid to vanillin by the white-rot
fungus
Pycnoporus cinnabarinus (
21) or the gram-positive bacterium
Amycolatopsis sp. strain HR167 (
2).
Amycolatopsis sp. strain
HR167 is used for the biotechnological production of vanillin
(J. Rabenhorst and R. Hopp, 1997, patent application EP0761817).
To use eugenol as a cheap resource to provide ferulic acid for
this biotransformation, the industrially approved bacterium
Ralstonia eutropha H16 was genetically modified to convert eugenol
to ferulic acid, quantitatively.

MATERIALS AND METHODS
Bacterial strains, plasmids, and growth conditions.
All bacteria and plasmids investigated in this study are listed
in Table
1. Cells of
Escherichia coli were grown at 37°C
in Luria-Bertani (LB) or M9 medium (
31). Cells of
Ralstonia eutropha H16 and
Pseudomonas sp. strain HR199 were grown at
30°C either in a nutrient broth (NB) medium (0.8% [wt/vol]
Bacto; Difco) or in mineral salt medium (MM) (
32) or HR-MM (
28)MM
supplemented with carbon sources as indicated in the text. Eugenol
was added to the medium at a final concentration of 0.05% (vol/vol).
Kanamycin was used at final concentrations of 300 and 50 µg/ml
for recombinant strains of
R. eutropha H16 and
E. coli, respectively.
Cells of
R. eutropha H16 and
Pseudomonas sp. strain HR199 were
grown in 250-ml Erlenmeyer flasks with baffles on a rotary shaker
(RC-6-W; A. Kühner AG, Basel, Switzerland) at 150 rpm.
Samples were taken from the cultures, and cells were removed
by centrifugation. The culture supernatants obtained were analyzed
by high-performance liquid chromatography (HPLC) with respect
to the appearance or disappearance of catabolic intermediates
as described below.
Analytical methods.
By using a Knauer HPLC apparatus, culture supernatants were
analyzed for excreted intermediates of the eugenol catabolism
by liquid chromatography without prior extraction. Intermediates
were separated by reverse-phase chromatography on a Nucleosil-100
C
18 column (particle size, 5 µm; column, 250 by 4.0 mm)
with a gradient of 0.1% (vol/vol) formic acid (eluant A) and
acetonitrile (eluant B) in a range of 27 to 100% (vol/vol) eluant
B and at a flow rate of 1 ml/min. For quantification, all intermediates
were calibrated with external standards. The compounds were
identified by their retention times, as well as the corresponding
spectra, which were identified with a diode array detector (WellChrom
Diodenarray-Detektor K-2150; Knauer, Berlin, Germany).
Enzyme assay.
Cells of R. eutropha H16 (wild type) and R. eutropha H16(pBBR1-JO2ehyABcalAcalB) were grown to the late exponential phase at 30°C in MM containing 1.0% (wt/vol) gluconate. Recombinant strains of E. coli were grown for 12 h at 37°C in LB in the presence of 1 mM isopropyl-ß-D-thiogalactopyranoside (IPTG). Cells were disrupted either by a twofold French press passage at 96 MPa or by sonification (1 min/ml of cell suspension with an amplitude of 40 µm) with a Bandelin Sonoplus GM200 ultrasonic disintegrator. The soluble fractions of crude extracts were obtained by centrifugation at 100,000 x g at 4°C for 1 h. Eugenol hydroxylase and coniferyl aldehyde dehydrogenase activities were measured as described previously (1, 25, 26). The coniferyl alcohol dehydrogenase activity was assayed photometrically at 30°C in 200 mM Tris-HCl buffer (pH 9.0) in the presence of 2 mM NAD and 4 mM coniferyl alcohol. The reaction was started by addition of NAD and was followed by measuring the initial change in A400 due to the oxidation of coniferyl alcohol (
= 22.4 cm2/µmol). A stock solution of coniferyl alcohol was prepared in dimethyl sulfoxide. One unit of enzyme activity was defined as the amount required to catalyze the conversion of 1 µmol of substrate per min. The activities determined with the spectrophotometric tests were confirmed by measuring the eugenol, coniferyl alcohol, coniferyl aldehyde, and ferulic acid concentrations of corresponding stopped reaction tests by HPLC analysis. The amount of soluble protein present was determined as described by Lowry et al. (19).
Isolation, manipulation, analysis, and transfer of DNA.
All genetic techniques were performed as described by Sambrook et al. (31). Conjugations of E. coli S17-1 (donor) harboring a hybrid plasmid and of R. eutropha H16 (recipient) were performed on solidified NB medium (13). The identity and accuracy of the constructed hybrid plasmids were confirmed by DNA sequencing by the chain termination method with the automatic sequencer LI-COR model 4000L (MWG-Biotech, Ebersberg, Germany).
Amplification and cloning of the structural gene (calA) of the coniferyl alcohol dehydrogenase from Pseudomonas sp. strain HR199.
The gene calA encoding coniferyl alcohol dehydrogenase was amplified in a PCR with the primers PCRcalAup (5'-AAAAGCGGCCGCGGACCGTAAAAAGGAAAGAGCATGCAACTG-3') and PCRcalAdown (5'-AAAAACTAGTCGTCCACGAACTTACACGTAGGTCGATG-3') together with PstI-digested genomic DNA from Pseudomonas sp. strain HR199 as template DNA. The PCR product was digested with NotI (site present in the upstream primer) and SpeI (site present in the downstream primer) and cloned in pBluescript SK-. In the resulting hybrid plasmid, pSKcalA, the calA gene was arranged colinear to and downstream of the lacZ promoter.
Amplification and cloning of the structural gene (calB) of the coniferyl aldehyde dehydrogenase from Pseudomonas sp. strain HR199.
The gene calB, encoding coniferyl aldehyde dehydrogenase, was amplified in a PCR with PstI-digested genomic DNA from Pseudomonas sp. strain HR199 and the primers PCRcalBup (5'-AAAAACTAGTAATAACAATTGACTCCTCAGGAGGTCAGC-3') and PCRcalBdown (5'-AAAAGGATCCCCACTACCAACGGTTCTAACACTCCGTT-3'). Since the upstream primer exhibited an SpeI site and the downstream primer exhibited a BamHI site, the correspondingly digested PCR product was cloned in pBluescript SK- with the gene calB colinear to and downstream of the lacZ promoter.
Construction of broad-host-range vector pBBR1-JO2.
A region comprising the lac promoter/operator region, the multiple cloning site (MCS), and the LacZ alpha peptide coding region was amplified as a 633-bp SspI fragment (MCSJO2) from pBluescript SK- by PCR with the primers PCRMCSup (5'-AAAAAATATTACCGAGCGCAGCGAGTCAGTGAGCG-3') and PCRMCSdown (5'-AAAAAATATTTTACGCGTCCCATTCGCCATTCAGGCTACGC-3'). After digestion of the kanamycin resistance-conferring broad-host-range vector pBBR1-MCS2 with SspI, a 704-bp fragment containing the MCS and lacZ gene of this vector was substituted by MCSJO2, resulting in the new broad-host-range vector pBBR1-JO2. Thus, the two vectors differed only in the orientation of the MCS. In pBBR1-MCS2, the orientation of the MCS corresponded to pBluescript KS-, and in pBBR1-JO2, it corresponded to pBluescript SK-.
Materials.
Restriction endonucleases, T4 DNA ligase, lambda DNA, and substrates used in the enzyme assays were obtained from either C. F. Boehringer & Soehne (Mannheim, Germany) or GIBCO/BRL-Bethesda Research Laboratories GmbH (Eggenstein, Germany). Agarose type NA was purchased from Pharmacia-LKB (Uppsala, Sweden). Synthetic oligonucleotides were purchased from MWG-Biotech (Ebersberg, Germany). All other chemicals were from Haarmann & Reimer (Holzminden, Germany), E. Merck AG (Darmstadt, Germany), Fluka Chemie (Buchs, Switzerland), Serva Feinbiochemica (Heidelberg, Germany), or Sigma Chemie (Deisenhofen, Germany).
Nucleotide sequence accession numbers.
The nucleotide sequence accession numbers of the ehyAB, calA (named "CADH" in the patent; Steinbüchel et al., patent application EP0845532), and calB genes are AJ243941, A92130, and AJ006231, respectively.

RESULTS
Tolerance of R. eutropha H16 to different eugenol concentrations.
R. eutropha H16 neither is able to grow on eugenol or ferulic
acid as the sole carbon source nor is able to convert eugenol
or ferulic acid to coniferyl alcohol or vanillin, respectively.
Consequently, it probably lacks the enzymes for the degradation
of ferulic acid and seemed to be a suitable candidate to produce
and accumulate ferulic acid from eugenol after heterologous
expression of genes for eugenol conversion to ferulic acid introduced
by genetic engineering. Since it is known that eugenol has antibacterial
properties, the tolerance of the wild-type strain
R. eutropha H16 to eugenol was studied.
To investigate the eugenol tolerance of R. eutropha H16, cells were precultured overnight in MM containing 0.5% (wt/vol) sodium gluconate as the carbon source. The cells were used for inoculation of several 50-ml cultures in 250-ml baffled Erlenmeyer flasks containing MM with 0.5% (wt/vol) sodium gluconate as the carbon source and increasing concentrations of eugenol ranging from 0.01% (vol/vol) to 0.1% (vol/vol), respectively (Table 2). The cultures were incubated for 48 h at 30°C, and growth was monitored by determination of the optical density at 600 nm (OD600). As shown in Table 2, R. eutropha H16 was highly sensitive to eugenol. Even at concentrations of about 0.01% (vol/vol), growth was significantly reduced. At concentrations higher than 0.05% (vol/vol), growth was completely inhibited. Based on these data, it was anticipated that the eugenol addition had to be strictly controlled in a biotransformation process based on a recombinant strain of R. eutropha H16.
Cloning and functional expression of ehyAB, calA, and calB in E. coli.
The genes that should be used to enable a recombinant
R. eutropha H16 strain to convert eugenol to ferulic acid were amplified
from the genomic DNA of
Pseudomonas sp. strain HR199. To confirm
the physiological function of these genes, they were expressed
in
E. coli XL1-Blue.
The genes ehyA and ehyB were recently cloned together with open reading frame 2 in pBluescript SK- (26). The resulting hybrid plasmid, pSKehyAB, conferred eugenol hydroxylase activity to the corresponding recombinant strain of E. coli XL1-Blue after growth in the presence of the inducer IPTG (Table 3). The genes calA and calB were amplified and cloned in pBluescript SK- as described in Materials and Methods. A recombinant strain of E. coli XL1-Blue harboring pSKcalA exhibited coniferyl alcohol dehydrogenase activity after growth in the presence of IPTG (Table 3). The hybrid plasmid pSKcalB conferred coniferyl aldehyde dehydrogenase activity to the corresponding recombinant strain of E. coli XL1-Blue after growth of this strain in the presence of IPTG (Table 3).
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TABLE 3. Eugenol hydroxylase, coniferyl alcohol dehydrogenase, and coniferyl aldehyde dehydrogenase activities in R. eutropha H16 (wild type) and H16(pBBR1-JO2ehyABcalAcalB) and in recombinant strains of E. coli XL1-Bluea
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Construction of hybrid plasmid pBBR1-JO2ehyABcalAcalB.
To equip the industrially relevant strain
R. eutropha H16 with
the genetic information necessary for the biotransformation
of eugenol to ferulic acid,
ehyAB,
calA, and
calB from
Pseudomonas sp. strain HR199 had to be transferred to this strain and were
therefore combined in a vector with a broad host range, which
could be replicated in
R. eutropha H16. Since no broad-host-range
vector exhibiting a kanamycin resistance gene combined with
a suitable MCS was available, the vector pBBR1-JO2 was constructed.
The genes calA and calB were isolated from NotI-SpeI-digested pSKcalA and SpeI-BamHI-digested pSKcalB, respectively, and subsequently cloned in the NotI-BamHI-digested hybrid plasmid pSKehyAB (Fig. 1). The resulting hybrid plasmid, pSKehyABcalAcalB, conferred eugenol hydroxylase, coniferyl alcohol dehydrogenase, and coniferyl aldehyde dehydrogenase activities to the corresponding recombinant E. coli XL1-Blue strain (Table 3). From the hybrid plasmid pSKehyABcalAcalB, a SacI-BamHI fragment was isolated that comprised the genes ehyAB, calA, and calB. This fragment was cloned in the corresponding sites of the broad-host-range vector pBBR1-JO2, resulting in the hybrid plasmid pBBR1-JO2ehyABcalAcalB (Fig. 1). Recombinant cells of E. coli XL1-Blue harboring the plasmid pBBR1-JO2ehyABcalAcalB exhibited eugenol hydroxylase, coniferyl alcohol dehydrogenase, and coniferyl aldehyde dehydrogenase activity after growth in the presence of IPTG (Table 3).
Transfer of plasmid pBBR1-JO2ehyABcalAcalB to R. eutropha H16 and physiological characterization of the recombinant strain.
The mobilizing strain
E. coli S17-1 was transformed with the
hybrid plasmid pBBR1-JO2
ehyABcalAcalB, which was isolated from
the recombinant strain of
E. coli XL1-Blue.
E. coli S17-1(pBBR1-JO2
ehyABcalAcalB)
was used as a donor strain in a conjugation experiment, and
the plasmid was transferred to
R. eutropha H16. In the soluble
fraction of the crude extract of gluconate-grown cells of the
resulting recombinant strain
R. eutropha H16(pBBR1-JO2
ehyABcalAcalB),
eugenol hydroxylase, coniferyl alcohol dehydrogenase, and coniferyl
aldehyde dehydrogenase activities were detected (Table
3). The
results revealed that
ehyAB,
calA, and
calB were functionally
expressed in
R. eutropha H16 with high efficiency. In contrast,
the control strain
R. eutropha H16 harboring only the vector
pBBR1-JO2 exhibited none of the activities mentioned (Table
3).
Production of ferulic acid from eugenol.
To investigate the conversion of eugenol to ferulic acid by the transconjugant R. eutropha H16(pBBR1-JO2ehyABcalAcalB), cells were grown in 50 ml of liquid MM with 1.0% (wt/vol) sodium gluconate in the presence of kanamycin overnight at 30°C. After the late-exponential growth phase was reached, 25-µl portions of eugenol (final concentration, 0.05% [vol/vol]) were added to this culture at different time intervals (Fig. 2), and the occurrence of coniferyl alcohol, coniferyl aldehyde, and ferulic acid in the culture supernatant was proven by HPLC analyses. In this experiment, a maximum conversion rate of 2.9 mmol per h per liter of culture was readily obtained without further optimization. The course of ferulic acid production is summarized in Fig. 2. Transconjugants that harbored only the vector pBBR1-JO2 and that were treated in the same way as a negative control showed no conversion of eugenol.

DISCUSSION
Vanillin is one of the most important aromatic compounds used
in the production of flavors and fragrances. Due to an increasing
demand for healthy and natural foods, several strategies were
applied to produce vanillin from natural sources by biotransformation.
The most promising substrates for this purpose were eugenol
and ferulic acid. The biotransformation of eugenol was studied
in detail in
Pseudomonas sp. strain HR199 (
24,
26,
28). This
bacterium is able to grow with eugenol as the sole carbon source,
despite its antibacterial property. Eugenol is degraded via
coniferyl alcohol, coniferyl aldehyde, ferulic acid, vanillin,
vanillic acid, and protocatechuic acid. One promising approach
to obtain a vanillin-producing strain from
Pseudomonas sp. strain
HR199 was based on the inactivation of the vanillin dehydrogenase
gene (
vdh) by site-directed mutagenesis. The resulting vanillin
dehydrogenase-deficient
vdh
Km
Pseudomonas sp. strain actually
accumulated vanillin up to 2.9 mM from 6.5 mM eugenol (
23).
However, vanillin was only transiently accumulated, due to further
oxidation to vanillic acid catalyzed by a side activity of the
coniferyl aldehyde dehydrogenase (
23). Based on ferulic acid
as a substrate, economically interesting vanillin production
processes were established with
Amycolatopsis sp. strain HR167
(
2; J. Rabenhorst and R. Hopp, 1997, patent application EP0761817)
or
Streptomyces setonii (
20) as a biocatalyst. With
Amycolatopsis sp. strain HR167, 19.9 g of ferulic acid liter
-1 was converted
to 11.5 g of vanillin liter
-1 within 32 h at a 10-liter scale,
which corresponds to a molar yield of 77.8% (J. Rabenhorst and
R. Hopp, 1997, patent application EP0761817). With
S. setonii strain ATCC 39116, 13.9 g of vanillin liter
-1 was obtained from
22.5 g of ferulic acid liter
-1 after 17 h of incubation at a
10-liter scale, corresponding to a molar yield of 75% (B. Müller,
T. Münch, A. Muheim, and M. Wetli, 1998, patent application
EP0885968).
Although ferulic acid is an extremely abundant cinnamic acid derivative found in the cell walls of woods, grasses, and corn hulls, it is not easily accessible from these natural sources, since it is covalently linked to the various carbohydrates as a glycosidic conjugate, or it occurs as an ester or amide. Thus, it can be released from these natural products only by alkaline hydrolysis (3). However, ferulic acid gained from this chemical process cannot be considered as "natural." Attempts to release ferulic acid enzymatically from lignin employing ferulic acid esterases or cinnamoyl ester hydrolases (10-12) are still far from being an implementable process due to unacceptable yields. Thus, the enzymatical conversion of eugenol to ferulic acid is a promising alternative to gain "natural" ferulic acid as the substrate for the above-mentioned biotransformations with Amycolatopsis sp. strain HR167 or S. setonii, respectively. The catabolism of eugenol, which proceeds via ferulic acid, was investigated in detail in Pseudomonas sp. strain HR199 and Pseudomonas sp. strain OPS1, and the genes involved have recently been cloned and characterized (4, 24, 26). Pseudomonas sp. strain HR199 has even been used for ferulic acid production from eugenol (28). However, the molar yield after a 75-h biotransformation was only 52%, since ferulic acid was further degraded by this strain.
Thus, the genes ehyAB, calA, and calB, encoding the enzymes eugenol hydroxylase, coniferyl alcohol dehydrogenase, and coniferyl aldehyde dehydrogenase, respectively, which catalyze the conversion of eugenol to ferulic acid in Pseudomonas sp. strain HR199, were expressed in a suitable host unable to degrade ferulic acid. This prerequisite was met by R. eutropha H16, which is a well-characterized gram-negative bacterium. It is already used in the industry for the production of polyhydroxyalkanoates such as poly(3-hydroxybutyrate) or poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (8), which might also be used for the conversion of residual carbon sources by the chemical industry (14, 18). Moreover, it is easily accessible for genetic and metabolic engineering. Thus, this safe and easy-to-use biocatalyst was an auspicious candidate for the establishment of the biotransformation process to produce ferulic acid. Although the R. eutropha wild-type strain H16, like other bacteria, appeared to be sensitive to high concentrations of eugenol (higher than 0.01% [vol/vol]), in biotransformation experiments with the corresponding recombinant R. eutropha strain H16(pBBR1-JO2ehyABcalAcalB) expressing the genes ehyAB, calA, and calB, fivefold-higher eugenol concentrations could be applied. However, the addition of eugenol had to be controlled in order not to exceed a final concentration of 3.25 mM (corresponding to 0.05% [vol/vol] eugenol) to avoid toxic effects. The eugenol addition mode was the only crucial parameter, and a conversion rate of 2.9 mmol per h per liter of culture was easily obtained without further optimization. This corresponded to a consumption rate of 0.48 g of eugenol per liter and per h, which is sufficiently high to further optimize a process based on a recombinant strain of R. eutropha H16. After a biotransformation time of 20 h, a total of 915 µmol of ferulic acid was obtained from 975 µmol of eugenol, corresponding to a molar yield of 93.8%. Thus, an effective biotransformation process leading from eugenol to ferulic acid was successfully established.

ACKNOWLEDGMENTS
H. Priefert and A. Steinbüchel are indebted to Haarmann
& Reimer GmbH for providing a collaborative research grant.
We thank Daniela Rehder for proofreading the manuscript.

FOOTNOTES
* Corresponding author. Mailing address: Institut für Mikrobiologie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 3, D-48149 Münster, Germany. Phone: 49-251-8339830. Fax: 49-251-8338388. E-mail:
priefer{at}uni-muenster.de.


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Applied and Environmental Microbiology, September 2002, p. 4315-4321, Vol. 68, No. 9
0099-2240/02/$04.00+0 DOI: 10.1128/AEM.68.9.4315-4321.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
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