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Applied and Environmental Microbiology, October 2003, p. 5935-5940, Vol. 69, No. 10
0099-2240/03/$08.00+0 DOI: 10.1128/AEM.69.10.5935-5940.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Melinda C. Wiles,2 Timothy D. Phillips,2 and Marian N. Beremand1*
Department of Plant Pathology and Microbiology,1 Department of Veterinary Anatomy and Public Health, Texas A&M University, College Station, Texas 778432
Received 5 March 2003/ Accepted 15 July 2003
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As a group, trichothecenes are characterized by the presence of a 12,13-epoxy-trichothec-9-ene nucleus, a feature that is necessary for toxicity (13, 32). However, the addition of different combinations of side groups to this trichothecene core nucleus plays an important role in determining the level of toxicity of each trichothecene. Although there are some notable exceptions, such as the acetylation of the hydroxyl group at the C-3 position which reduces the toxicity of many trichothecenes (1), in general, the greater the number and the more elaborate the side groups, the greater the toxicity (35). One of the toxicologically most important examples involves 4,15-diacetoxyscirpenol (DAS), neosolaniol (NEO), and T-2 toxin. These three trichothecenes display increasing toxicity in mice, as demonstrated by 50% lethal doses of 23.0, 14.5, and 5.2 mg/kg, respectively (34). Significantly, they differ from one another only at the C-8 position by the presence of a hydrogen, a hydroxyl group, and an esterified hydroxyl group, isovaleroxy, respectively.
Fusarium sporotrichioides and F. sambucinum have been used as model organisms in studies directed toward the identification of the genes that encode the enzymes responsible for the hydroxylations and esterifications that occur during trichothecene biosynthesis. F. sporotrichioides NRRL 3299 makes a closely related series of type A trichothecenes in culture, with the predominant one being T-2 toxin. Minor components include DAS, NEO, 8-propionyl-neosolaniol (P-NEO), and 8-isobutyryl-neosolaniol (B-NEO) (8). All five of these trichothecenes, except DAS, result from a hydroxylation at position C-8 and, with the exception of NEO, a subsequent esterification at C-8-OH and therefore differ from one another only at the C-8 position. Some isolates of Gibberella pulicaris also possess the ability to synthesize NEO, 8-acetylneosolaniol (8-Ac-NEO), and/or T-2 toxin, in addition to DAS (3, 30). Despite a well-characterized biosynthetic pathway for type A trichothecenes (12) and the fact that most of the identified trichothecene (Tri) genes constitute a large gene cluster (10, 17), the gene required for the esterification reaction at C-8 has not been identified.
In a previous study, we isolated several new candidate trichothecene genes on the basis of an expression pattern that is dependent upon the presence of two trichothecene regulatory genes, Tri10 and Tri6 (24). One of these genes was Tri1, which encodes a cytochrome P450 monooxygenase required for oxygenation of position C-8 in the biosynthesis of T-2 toxin (23). Tri1 is not closely linked to the core trichothecene cluster. In the present study, we characterized Tri16, a gene that we identified while sequencing the DNA region adjacent to Tri1. The resulting data indicate that Tri16 encodes a C-8 acyltransferase required for the production of T-2 toxin and establish the presence of a second trichothecene gene cluster. Together, Tri16 and Tri1 are responsible for the addition of the C-8 substituents required for the production of the most toxic trichothecenes made by F. sporotrichioides.
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Nucleic acid isolation.
Isolation of genomic DNA and RNA has been described previously (16, 29). Plasmid DNA was isolated with the QIAprep spin miniprep kit (Qiagen, Valencia, Calif.). Restriction fragments were separated on 1.2% agarose (Boehringer Mannheim, Indianapolis, Ind.) gels and purified with the QIAquick gel extraction kit (Qiagen).
Disruption plasmid construction and fungal transformation.
pKO16, the Tri16 disruption plasmid, was constructed by cloning a fragment of the Tri16 sequence obtained from a cDNA clone into the previously described fungal cloning vector pUCH3 (22). Specifically, a 963-bp fragment, including 18 bp of the pBluescript SK (Stratagene, La Jolla, Calif.) vector sequence at the 5' end, was cut from plasmid DNA of the Tri16 cDNA clone 14J4 from our cDNA library (24) with the restriction enzymes BamHI and SalI (New England Biolabs, Beverly, Mass.) and ligated to BamHI- and SalI-cut pUCH3. The resulting plasmid, pKO16, harbors a doubly truncated fragment of the Tri16 coding sequence adjacent to the hygromycin B resistance gene (hygB) in pUCH3. Protoplast formation and fungal transformation were conducted as previously described (26, 29).
PCR, Northern, and Southern analyses.
PCR analyses of Tri16 transformants were conducted with primers A-90 (5'-GCCCTTTCTAGATGCCTGAG-3'), A-91 (5'-GTTGGTTGCCTCCGTCTTGG-3'), and S-12 (5'-CAGGTGGGCCTTGACATGTG-3'). PCR conditions were 30 cycles of 30 s at 95°C, 60 s at 51°C, and 90 s at 72°C and 1 cycle of 10 min at 72°C. All reactions were performed with Taq DNA polymerase (Promega, Madison, Wis.) in accordance with the manufacturer's instructions. For Northern analyses, RNA electrophoresis was conducted with 1% agarose gels containing 1.1% formaldehyde and each lane was loaded with 5 µg of total RNA (27). For Southern analyses of Tri16 transformants, electrophoresis was performed in accordance with standard protocols (27) and 5 µg of DNA from each transformant strain (1 µg from NRRL 3299) was used in restriction digests. Genomic DNA from all strains was digested with BglII (New England Biolabs), which does not cut the pKO16 vector. For Southern analysis of the Tri16 and Tri1 genes in F. sporotrichioides and G. pulicaris, 5 µg of DNA was used for each restriction digest with ApaI, SmaI, or EcoRI (New England Biolabs, Boehringer Mannheim). These enzymes were chosen because sequence information indicated that Tri16 and Tri1 in F. sporotrichioides are on the same EcoRI and SmaI fragments but on different ApaI fragments. The Tri16 and Tri1 probes for all Southern and Northern analyses were the cDNA insert of library clone 14J4 excised with BamHI and SalI and the cDNA insert of library clone 1J3 cut with ApaI and SmaI, respectively. Individual radioactively labeled DNA probes were prepared using [
-32P]dCTP (Amersham, Piscataway, N.J.) with the Nick Translation System (GIBCO BRL, Rockville, Md.). All Northern and Southern blots were made on Hybond-N+ nylon membranes (Amersham) and hybridized, washed, and stripped under high stringency as specified by the Gene Images nonisotopic nucleic acid detection kit (United States Biochemical, Cleveland, Ohio). Autoradiographic images were produced on BIOMAX MR or X-Omat LS imaging film (Kodak, Rochester, N.Y.).
DNA sequencing and sequence homology searches.
Inserts isolated from plasmid DNA preparations of cDNA clones were sequenced by using either the ABI Prism Dye Terminator cycle sequencing core kit or the BigDye Terminator cycle sequencing core kit (Perkin-Elmer, Boston, Mass.). All reactions were run on a 373 or 377 DNA sequencer (Applied Biosystems, Foster City, Calif.) by the Gene Technologies Laboratory at Texas A&M University. Nucleotide sequences and their putative corresponding amino acid sequences were compared to the National Center for Biotechnology Information nonredundant database (GenBank+RefSeq Nucleotides+EMBL+DDBJ+PDB sequences) by using the blastn and blastp algorithms (4).
Toxin analyses.
Ethyl acetate extractions of whole-culture samples were performed as previously described (29). Trichothecenes in the ethyl acetate extracts were detected and identified by gas chromatography-mass spectrometry with a Hewlett-Packard 5890 gas chromatograph directly interfaced to a Hewlett-Packard 5970B mass spectrometer via a heated capillary interface. The gas chromatograph was configured with a splitless injection port and a DB-5ms fused-silica capillary column coated with a 0.25-µm film of stationary phase (30 m by 0.25 mm [internal diameter]; J&W Scientific, Folsom, Calif.). Sample volumes of 2 µl were introduced to a heated injection port. The injection and transfer line temperatures were 300°C. The oven temperature program consisted of an initial temperature of 175°C that was held for 2.0 min, ramped to 275°C at 23°C/min, held at 275°C for 2 min, ramped to 290°C at 30°C/min, and held at 290°C for 16 min. Helium was the carrier gas at a constant flow rate of 0.75 ml/min. A mass-selective detector was used in selective ion monitoring mode with an ionization energy of 70 eV and an ion source temperature of 180°C. T-2 toxin and NEO were purchased from Sigma and used without further purification. T-2 toxin was below the detection limit (<1 ppm) in the NEO standard.
Nucleotide sequence accession number.
The GenBank accession number for the Tri16 nucleotide and predicted protein sequences is AY187275.
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Disruption of Tri16.
Tri16 mutants were generated by transforming F. sporotrichioides NRRL 3299 with pKO16. This vector contains a doubly truncated fragment of the Tri16 coding region. Homologous integration of a single copy of this construct results in two nonfunctional copies of the Tri16 gene, one truncated at the amino terminus (by 88 amino acids) and the other truncated at the carboxy terminus (by 91 amino acids) (Fig. 1A). Transformation of the wild-type strain yielded 28 hygromycin-resistant transformants. Southern analysis revealed that at least 11 of these transformants no longer contained a wild-type Tri16 gene. Two of these 11, Tx #7 and Tx #20, resulted from the homologous integration of a single copy of pKO16; the remainder resulted from the homologous integration of multiple tandem copies, e.g., Tx #4 (Fig. 1B). In contrast, transformant Tx #22 contained a wild-type-sized Tri16 BglII fragment, as well as a second, larger Tri16-hybridizing BglII fragment indicative of the ectopic integration of the transforming vector. These integration events were confirmed in a PCR with primer A-90 and vector-specific primer S-12 (Fig. 1A) that would yield a 1,241-bp product only if homologous integration occurred. Transformants Tx #4, Tx #7, and Tx #20 all produced this product (Fig. 1C), while neither the wild-type strain nor transformant Tx #22 did. We also conducted a PCR with primers A-90 and A-91 (Fig. 1A) and found that the wild-type strain and Tx #22 yielded the expected 1,379-bp PCR product for the wild-type Tri16 gene sequence but that Tx #4, Tx #7, and Tx #20 did not (Fig. 1C). Thus, Tx #4, Tx #7, and Tx #20 are transformants resulting from homologous integration of pKO16 while the transformed DNA in Tx #22 appears to have been inserted into the genome ectopically.
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FIG. 1. Disruption of Tri16 in F. sporotrichioides NRRL 3299. (A) Expected result for insertion of the Tri16 gene disruption construct pKO16 into the host genome via a single homologous integration event. B, BglII restriction sites. (B) Southern blot analysis of selected transformant strains. Wild-type (WT) and transformant genomic DNAs were cut with BglII, and blots were probed with a doubly truncated fragment of the Tri16 gene. M, lambda DNA cut with HindIII. All transformants except Tx #22 lack the wild-type Tri16 BglII fragment. Instead, transformants Tx #7 and Tx #20 contain a single fragment consistent with the expected combined size (approximately 13 kb) of the wild-type Tri16 BglII fragment and one homologously integrated copy of pKO16. The remaining transformants contain a larger fragment indicative of the presence of two (expected size, approximately 20 kb) or more tandem, homologously integrated copies of pKO16. Band sizes (bases) of the marker are shown at the right. (C) PCR analysis of wild-type and selected transformant strains. PCRs were performed with primers A-90 and A-91 and primers A-90 and S-12 (positions are shown in panel A). PCR products were resolved on an agarose gel and stained with ethidium bromide. M, lambda DNA cut with BstEII. Band sizes (bases) of the marker are shown at the left, and band sizes of the PCR products are shown at the right.
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Tri16 transformants.
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FIG. 2. Northern analysis of Tri16 and Tri1 transcript accumulation by F. sporotrichioides strains grown in liquid culture. Total RNA was isolated for each strain from mycelia collected from cultures grown for 23, 27, and 36 h in YEPD-5G medium. Strains are (left to right) the wild type (NRRL 3299), Tri16 transformants (Tx #4, Tx #7, and Tx #20), and a transformant (Tx #22) resulting from ectopic integration of pKO16. rRNA bands from the agarose gel stained with ethidium bromide are shown.
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FIG. 3. Chromatograms of ethyl acetate extracts of 7-day Fusarium cultures. (A) Analysis of the Tri16 transformants. P, P-NEO; B, B-NEO. (B) Precursor feeding and coinoculation experiments. std., standard.
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FIG. 4. Southern blots of F. sporotrichioides NRRL 3299 (A) and G. pulicaris (F. sambucinum) R-6380 (B) probed with the Tri16 and Tri1 genes. E, EcoRI; S, SmaI; A, ApaI; M, lambda DNA digested with BstEII. Sizes (bases) of selected marker bands are shown at the left.
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Tri5 transformant 8-3-9 (25). These data indicate that R-6380, like MB1716, can esterify C-8 although it cannot hydroxylate this carbon. Since MB1716 converted the exogenously supplied NEO to T-2 toxin inefficiently, this strain was coinoculated with a Tri16 mutant (Tx #7) into YEPD-5G medium to test for production of T-2 toxin under these conditions. This mixed culture was capable of producing T-2 toxin, but it still accumulated primarily DAS and NEO (Fig. 3B). |
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The most obvious phenotype of the Tri16 disruption mutants is that they accumulate NEO and do not produce T-2 toxin. This result is consistent with the inability to add the isovaleryl moiety to the C-8 hydroxyl group. A previous study (8) showed that a leucine auxotroph of NRRL 3299 produced less T-2 toxin and more P-NEO and B-NEO than the wild-type parent when leucine was limited during growth in YEPD-5G medium. A wild-type toxin profile was restored by the addition of sufficient levels of leucine to the medium. Since leucine is a precursor to the C-8 isovaleryl moiety (8), the overproduction of P-NEO and B-NEO was attributed to increased competitive esterification of propionyl and isobutyryl groups at C-8 due to the decreased availability of isovalerate. If the addition of the propionyl and butyryl moieties were catalyzed by an enzyme other than TRI16, then P-NEO and B-NEO levels should increase in the
Tri16 mutants. They did not. Instead, they declined such that P-NEO and B-NEO were no longer detectable. The failure of
Tri16 mutants to accumulate P-NEO and B-NEO indicates that TRI16 also is responsible for the esterification reactions that result in the production of P-NEO and B-NEO.
In the proposed metabolic grid for trichothecene biosynthesis (23), the placement of Tri16 would fall between Tri1 and Tri8, which encodes a C-3 esterase (20). 3-Acetylneosolaniol is thought to be the preferred substrate for TRI16. However, the production of 4-deoxy-T-2 toxin and HT-2 toxin by Tri13 (C-4 hydroxylase) deletion mutants and Tri7 (C-4 acetylase) deletion mutants (10, 11), respectively, suggests that 8-hydroxycalonectrin and 3,15-diacetyl-T-2 tetraol also may serve as substrates for TRI16. Therefore, in addition to being able to catalyze the addition of multiple acyl (isovaleryl, propionyl, and butyryl) groups to C-8-OH, TRI16 appears to accommodate multiple trichothecene substrates.
Tri16 is the fourth cloned acyltransferase gene for trichothecene biosynthesis, but among the protein products of those genes, TRI16 is significantly similar only to TRI101. Aside from one conserved motif in TRI3, TRI3 and TRI7 are not significantly similar to TRI16 or TRI101 and have previously been reported not to be similar to known fungal acetyltransferases (10, 21, 22).
Tri1 and Tri16 are adjacent to each other but not to the core trichothecene gene cluster (20). On the basis of the toxicological differences between DAS and T-2 toxin, this organizational pattern has potential implications for the evolution of the production of more toxic trichothecenes and for the evolution of gene clusters for fungal secondary metabolism. Tri1 and Tri16 encode enzymes for the two consecutive steps that extend the trichothecene pathway beyond DAS to the most toxic type A trichothecene, T-2 toxin. A similar pattern exists for another fungal secondary metabolite. The last three steps in the cephalosporin biosynthetic pathway in Acremonium chrysogenum are catalyzed by two adjacent genes that are not located in the cluster of genes required for the first portion of the pathway (14). Adjacent genes also encode enzymes that catalyze consecutive biosynthetic steps in fungal secondary metabolic pathways for the gibberellins (31) and the aflatoxins (36), but they are not organized in a separate second gene cluster. Certainly, the comparative analysis of Tri1 and Tri16 relative to the core trichothecene gene cluster in other Fusarium species will be most interesting.
As determined by Southern hybridization, G. pulicaris R-6380 contains a putative Tri16 ortholog that is physically linked to a potential ortholog of Tri1. This DAS-accumulating strain, like the tri1 DAS-accumulating mutant of F. sporotrichioides, can convert NEO to T-2 toxin at a low rate and therefore can add an isovalerate moiety to C-8-OH. Although some naturally occurring isolates of G. pulicaris produce T-2 toxin (3, 30), to our knowledge, this is the first report that R-6380 can produce T-2 toxin under laboratory conditions. The ability of R-6380 to produce T-2 toxin from NEO suggests that it lacks only the ability to hydroxylate the C-8 position of trichothecenes. Disruption of Tri16 in R-6380 will be necessary to prove that the TRI16 homolog catalyzes the C-8 esterification. Some strains of G. pulicaris produce 8-Ac-NEO as their primary trichothecene metabolite (7). Whether TRI16 or another enzyme in Fusarium can add the acetyl side group to C-8 also remains to be determined. In addition, both genetic and molecular studies can be used to reveal the location of Tri16 relative to the other Tri genes in G. pulicaris.
We previously reported the failure to detect a Tri1 ortholog in G. zeae (F. graminearum) GZ3639, a type B trichothecene producer, by Southern analysis (23). Similarly, we were not able to detect an ortholog of Tri16 in GZ3639. However, examination of the initial release of the draft sequence of the F. graminearum PH-1 genome (Fusarium graminearum Sequencing Project, Whitehead Institute/MIT Center for Genome Research [http://www-genome.wi.mit.edu]) revealed possible orthologs for both of these genes. As in F. sporotrichioides NRRL 3299, the putative orthologs are adjacent to each other and are not associated with the core trichothecene gene cluster, but their directions of transcription diverge rather than converge. While the Tri16-like sequence appears to be inundated with stop codons and therefore nonfunctional, the Tri1 ortholog could be functional. Analysis of the function of the Tri1 ortholog in F. graminearum would be critical to answering the question of whether this species uses this gene or a different one to hydroxylate the C-8 position in the biosynthesis of type B trichothecenes.
The characterization of Tri16 completes the assignment of genes for the last eight steps in the trichothecene biosynthetic pathway in F. sporotrichioides NRRL 3299 and completes the identification of genes for the esterifications required at C-5, C-4, C-15, and C-8 (10, 21, 22; this study) in the synthesis of T-2 toxin. In contrast to TRI101, the activity of TRI16, like that of TRI7, increases trichothecene toxicity.
Present address: Frost & Sullivan, San Antonio, TX 78229. ![]()
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