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Applied and Environmental Microbiology, December 2003, p. 7181-7187, Vol. 69, No. 12
0099-2240/03/$08.00+0 DOI: 10.1128/AEM.69.12.7181-7187.2003
Copyright © 2003, American
Society for
Microbiology. All Rights Reserved.
Virology Division, City of Milwaukee Health Department, Milwaukee, Wisconsin 53202,1 Milwaukee Metropolitan Sewerage District, Milwaukee, Wisconsin 532042
Received 12 May 2003/ Accepted 15 September 2003
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Assuming that Lake Michigan source water would have low titers of viruses, the personnel of the local sewage treatment plant were approached to provide sewage to be used as a positive control to test our ability to use the U.S. EPA ICR procedure for virus monitoring by organic flocculation and cell culture (16) to detect EVs. Because of our success in using the organic flocculation procedure with the U.S. EPA-mandated BGM cell culture method, this short-term project turned into a monthly screening of the sewage plant influent and effluent to monitor the plant's efficiency in the inactivation of viruses and the discharge of viruses into Lake Michigan, which is also the source water for Milwaukee's two drinking water treatment plants.
Detection of EVs in Milwaukee sewage was expected since many researchers (1, 2, 8, 12, 15) have shown great success in EV detection with similar procedures. However, our approach was different in that we undertook a long-term project for one site, grouped all sewage EVs by cell culture host range analysis, and serotyped a large portion of the sewage EV isolates, and since ours is also a clinical diagnostic virus laboratory, we could compare the EVs found in sewage to those that were causing clinical problems in the community. Two earlier studies comparing sewage EVs with reported clinical EV data, a 3-year study (1974 to 1977) in Reading, Great Britain (15), and a 1979-to-1981 Canadian study (9), demonstrated a similarity of clinical and sewage EVs. Since ours is a clinical laboratory, we also used multiple types of cell cultures to maximize clinical virus recovery and suspected that two cell lines (RD and Caco-2), which we relied on for clinical isolation of EVs, might be useful for environmental screening as an adjunct to the U.S. EPA ICR-mandated BGM cells. The 1970s British study (15) showed the usefulness of inoculating five different cell types, and the Canadian study (9) used two cell types, Vero and BSC-1. Another purpose of this study, considering the changing pattern of medical diagnostic testing, was to show that as we continue to experience a drop in the number of clinical specimens submitted for EV diagnosis, by adding routine testing of sewage to supplement the testing of clinical specimens, we could enhance our knowledge of which EVs are circulating in the community.
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Cell
cultures.
Rhesus monkey
kidney (RMK) primary, human rhabdomyosarcoma (RD), human embryonic lung
(HEL), and Buffalo green monkey kidney (BGM) cells were purchased from
BioWhittaker, Walkersville, Md. Human epidermoid carcinoma of the
larynx (HEp-2) and human adenocarcinoma of the colon (Caco-2) cells
were obtained from the American Type Culture Collection, Manassas, Va.
Human foreskin (HFS) cells were obtained at low passage from a local
hospital virus laboratory that starts its own cultures every 6 months.
Culture media, Eagle's minimum essential medium with Earle's
salt solution (MEM) and fetal bovine serum (FBS), were purchased from
Sigma, St. Louis, Mo. All cell culture media contained HEPES buffer,
L-glutamine, penicillin, streptomycin, gentamicin sulfate,
and amphotericin B. Cell cultures were grown in CO2
incubators at 35.5°C and 4.5% CO2. Stock cell
cultures were grown in 75- or 162-cm2 plastic flasks
(Costar, Corning, N.Y.) with 5 or 10% FBS-MEM and split
weekly. Twenty-four-well plates (Costar) of heteroploid cell types were
grown in 5% FBS-MEM and maintained on 2%
FBS-MEM. Diploid cell types were grown and maintained with
10% FBS-MEM. RMK primary cultures were grown in 24-well
plates on 10% FBS-MEM and maintained with 2%
FBS-MEM. Stock cell cultures and uninoculated 24-well plastic
plates of cells were kept in a CO2 incubator separate from
inoculated cultures. Cell cultures inoculated with sewage concentrate
were kept in a different CO2 incubator than were plates
inoculated with clinical
specimens.
Organic flocculation
procedure.
Concentration of
virus in sewage specimens was accomplished by an organic flocculation
procedure described in the U.S. EPA ICR virus-monitoring
protocol (4,
16). A brief description
of the procedure follows. At room temperature, 1 N HCl was added to a
2% beef extract V solution of wastewater to lower the pH to 3.5
± 0.1. After continued stirring for 30 min, the solution was
dispensed into four 250-ml centrifuge bottles and spun at 2,500
x g for 15 min at 4°C. The supernatant was
discarded, and all four pellets were resuspended in a total of 30 ml of
0.15 M sodium phosphate buffer. After the pH was adjusted to 7.0 to
7.5, the concentrate was refrigerated at 4°C for 15 to 30 min
to allow the pellet to dissolve completely. After readjustment of the
pH to 9.0 to 9.5 with NaOH and centrifugation at 6,000 x
g for 10 min at 4°C, the supernatant was poured off
and saved. Finally, HCl was added to the saved supernatant to adjust
the pH to 7.0 to 7.5, and then the sample was stored at 4°C
until it was used to inoculate cell
cultures.
Total culturable virus
assay.
Detection of virus
in concentrated sewage specimens was accomplished with a modified form
of the U.S. EPA ICR water-monitoring protocol
(4,
16). A brief description
of our modification (14)
of the procedure follows. A 1:8 dilution of the sewage concentrate in
2% FBS-MEM was filtered through a
0.2-µm-pore-size sterilizing filter pretreated with 2%
beef extract. The filtered dilution of sewage was inoculated into the
wells of 24-well plastic plates by addition of 0.5 ml of dilution per
well, or 12 ml per 24-well plate. BGM and RD cells were used for the
entire study. Caco-2 cells were used from 1997 to 2002, and HFS cells
were used from 1994 to 1996. For virus adsorption, the inoculated
24-well plates were incubated for 2 h at 35.5°C.
After the incubation period, the inoculum was removed and each well was
washed with 0.5 ml of saline. After aspiration of the saline, 0.5 ml of
2% FBS-MEM was added to each well. The 24-well plates
were then incubated at 35.5°C and 4.5% CO2
and examined microscopically for a cytopathic effect (CPE) daily.
Cultures were maintained for 14 days, and wells with no CPE were not
blind passaged. The EV CPE was typical and was distinct from the
reovirus CPE that occurred mainly on BGM
cells.
Cell culture host range analysis
of sewage EV isolates.
All
initial sewage EVs were grouped as echovirus, coxsackievirus A,
coxsackievirus B, or poliovirus by growth pattern upon subculture to
seven cell types: RMK, HEp-2, HEL, HFS, RD, BGM, and Caco-2. When a
cell culture well inoculated with the filtered sewage dilution showed a
significant CPE (2 to 4+), the fluid in the well was diluted
1:20 with 2% FBS-MEM and 0.05 ml was added to one well
of seven different cell types (as described above). Over a period of 2
to 5 days, the newly inoculated cells were observed microscopically for
the development of a CPE. Typical groupings (Table
1) were based on the experience of this laboratory with isolate typing and
observation of the CPE patterns seen upon subculturing.
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TABLE 1. Key
for grouping of sewage EV isolates by cell culture host range analysis,
using production of CPE on various cell types as an indicator
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MPN titer
calculation.
The U.S. EPA,
Cincinnati, Ohio, supplied a computer program for the
most-probable-number (MPN) calculations for the ICR. The program uses
the number of replicates inoculated, the number of positive replicates,
and the inoculation volume to calculate the MPN (CPE units). This
program also calculates 95% confidence intervals for MPN
titers.
Clinical specimens.
Specimens for primary virus isolation
were received from Milwaukee area hospitals and clinics, as well as
from the Milwaukee County Medical Examiner's Office. Local
hospitals, which maintain their own virus laboratories, use this
laboratory as a reference laboratory for EV serotyping and send cell
culture EV isolates for serotyping. All clinical specimens were
processed and inoculated onto 24-well plates of the same seven cell
types used for host range analysis. These cultures were kept for 12 to
14 days and observed daily for CPE. Over the period of this study,
essentially all Milwaukee area clinical EV isolates were serotyped by
this laboratory.
QC.
In May 1997, our laboratory was
approved by the U.S. EPA to perform ICR virus testing. As part of the
achievement and maintenance of approval status, we passed two on-site
inspections and audits and analyzed performance evaluation and quality
control (QC) samples as required. Also, for our environmental testing,
each lot of beef extract used in the organic flocculation concentration
procedure was screened for adequate virus recovery. For the screening,
1 liter of 2% beef extract was inoculated with 200
infection-forming units of poliovirus 3 (U.S. EPA-approved QC virus)
and then processed as described above. The average recovery for eight
screenings was 73%.
In addition to the above-described QC procedures, the sensitivities of our cell lines were demonstrated by (i) laboratory participation in College of American Pathologists proficiency testing for virus isolation; (ii) the laboratory's ability to isolate a variety of viruses from different types of clinical specimens, with the same cell lines used for our environmental testing; and (iii) the use of a poliovirus 3 positive control plus a negative control with BGM cells for each sewage sample tested.
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Seasonal appearance of
EVs.
This laboratory has a
long experience with the diagnosis of EV infections. Every summer from
1975 to 2002 (13,
14), we have documented,
by virus isolation, that EVs have caused clinical problems in the
Milwaukee area. However, the magnitude of the annual summer-fall
clinical EV peaks (Fig.
1) has been decreasing since the early 1990s (from 1990 to 2002, the
annual number of EV cases declined from 190 to 43). This decreased
annual peak size reflects a drop in nongenital clinical virus culture
specimens (from 1990 to 2002, the annual number of specimens decreased
gradually from 8,715 to 1,083) submitted to the Milwaukee Health
Department. Also, since 1996, a few local hospitals have begun doing
their own virus culturing and since then have only used this laboratory
as a reference laboratory to serotype their EV isolates. However, we do
receive all local EV isolates for serotyping, indicating that less
virus culture for EVs has been performed in recent years and thus
giving momentum to the idea of sewage testing to better understand
which EVs are circulating in the community.
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FIG. 1. Clinical
EV cases confirmed each month by isolation of virus, 1990 to
2002.
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During the years of comparative clinical and sewage testing, 9 to 19 (average, 13.7) different clinical EV serotypes were detected each year (Table 2) but only between 4 and 11 (average, 7.4) serotypes were detected in sewage, always fewer serotypes than were detected for clinical specimens. From 1994 to 2002, peak EV titers in sewage occurred during the same months when seasonal clinical EV activity was evident (Fig. 2), with 556 (80.1%) of the clinical cases and 747 (69.9%) of the sewage isolates detected during July, August, September, and October. Maximum seasonal sewage MPN-per-liter titers varied greatly, with the highest maximum, 3,347 MPN/liter (95% confidence interval, 2,028 to 4,842 MPN/liter), occurring in July 1997 and the lowest maximum, 237 MPN/liter (95% confidence interval, 113 to 385 MPN/liter), occurring in September 1996. Each year, the peak in diagnosed clinical infections and the peak in sewage EV MPN-per-liter titers occurred in either the summer or the early fall. However, some years with a relatively large number of clinical cases (1995, 119 clinical cases; 1998, 89 clinical cases) had relatively low maximum sewage titers (913 and 631 MPN/liter, respectively). Also, the converse was seen in 2002, when a high maximum sewage EV titer (3,218 MPN/liter, 95% confidence interval of 1,778 to 5,727 MPN/liter) was observed in July but only 43 EV infections were confirmed for the year. Thus, EV disease and EVs in sewage peak during the same time frame each year (comparison of the percentage of total sewage isolates and the percentage of total clinical cases by month: Wilcoxon signed-rank test, W+ = 36, W- = 42; n = 12; P = <0.8501) but a linear quantitative relationship does not exist.
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TABLE 2. Number
of different non-poliovirus EV serotypes
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FIG. 2. Comparison
of monthly clinical EV cases with monthly EV sewage titers, August 1994
to December
2002.
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TABLE 3. Number
of sewage EV isolates grouped by cell culture host range analysis
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0.001).
However, echoviruses also frequently produced a CPE on RD cells (219 of
859 echoviruses). BGM cells were more sensitive for type B
coxsackieviruses (126 of 151 isolates) than were Caco-2 cells (15 of
151 isolates) (chi-square test = 63.56; P
0.001). RD cells detected the most polioviruses (22 of 46 poliovirus
isolates). No matter the type of EV or the cell system used, more than
90% of the isolate CPE was detected in 7 days or less
(14). It is noteworthy
that reoviruses were mainly detected on BGM cells, with a CPE only
becoming apparent at 7 or more days postinoculation (data not
shown). |
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TABLE 4. Number
of sewage EVs isolated on various cell types in 1994 to 2002
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TABLE 5. EV
comparisons: clinical cases versus sewage isolates
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1994.
The most common clinical EV, echovirus
18, was not detected in sewage in 1994. However, other common clinical
EVs, coxsackieviruses B4 and B2 and echovirus 6, were detected in
sewage. A high percentage of typed sewage isolates (46.2%) were
echovirus 6, which accounted for only 7.5% of the clinical
infections. Echovirus 11 was detected in sewage but not seen
clinically.
1995.
The four most common clinical EVs
(coxsackievirus B4, echovirus 11, coxsackievirus B5, and echovirus 9)
in 1995 were all detected in sewage. Eleven different clinical EV
serotypes were not detected in influent samples. Echovirus type 20 was
detected in sewage but not seen in clinical
cases.
1996.
Coxsackieviruses A9 and A10 were the
most commonly detected clinical EVs in 1996 (26.7 and 16.3% of
the cases, respectively), but neither was detected in sewage. Echovirus
7 was detected both clinically (16.3% of cases) and in sewage
(37.5% of typed isolates), as were coxsackievirus B5
(7.0% of the clinical cases and 37.5% of the typed sewage
isolates), echoviruses 6 (4.7% of the clinical cases and
16.7% of the typed sewage isolates), and echovirus 4
(3.5% of the clinical cases and 4.2% of the typed sewage
isolates).
1997.
The most common clinical EV, echovirus
6 (39.4% of the cases), was also the most frequently detected
sewage EV (53.1% of the typed isolates) in 1997. Echovirus 17
and coxsackievirus B2, both seen frequently in clinical cases (18.2 and
10.1%, respectively), were not detected in sewage. Echovirus 12
was detected in sewage but not in clinical
cases.
1998.
Echovirus 30 was the predominant
clinical EV (46.1% of the cases) and also the most commonly
detected sewage EV (50.0% of the typed isolates) in 1998. One
echovirus 11 infection was confirmed clinically, and echovirus 11 was
also detected in sewage. However, both echovirus types 6 and 7 were
detected in sewage but no clinical infections were
confirmed.
1999.
Echovirus 6 was the predominant
clinical and sewage isolate in 1999, with 60.3% of the clinical
cases and 79.5% of the typed sewage isolates, respectively.
Coxsackievirus A9 was a common cause of clinical disease (20.6%
of the cases) but was not detected in sewage. Coxsackievirus B4 was
detected in both clinical specimens (5.9% of the cases) and
sewage specimens (13.0% of the typed isolates), while echovirus
6 and coxsackievirus B3 were identified in sewage but not detected in
clinical specimens.
2000.
Coxsackievirus B5 was the predominant
EV in both sewage and clinical samples in 2000, with 40.7 and
33.3% of the typed isolates, respectively. Coxsackievirus B4
accounted for 9.5% of the clinical cases and 1.7% of the
sewage isolates. Coxsackievirus A4 and echovirus 22 were detected
clinically but not recovered from sewage, and conversely, echovirus
types 13, 14, 15, and 33 were detected in sewage but not in clinical
specimens.
2001.
Echovirus 13, an EV that until 2001 had
been detected in the United States only rarely since 1970
(5), was the most
frequently diagnosed EV for clinical infections (44.1% of cases)
and also the EV most commonly detected in sewage (36.2% of typed
isolates) in 2001. The other two most common clinical EVs, echovirus 18
(32.4% of the cases) and coxsackievirus B3 (5.9% of the
cases), were also detected in sewage. However, a number of EVs detected
in sewage, echovirus types 6, 11, 22, and 25, were not seen
clinically.
2002.
Coxsackievirus B1 was the most
frequently detected clinical EV (20.9% of the cases) and was
also identified in sewage (3.3% of the typed isolates) in 2002.
Echovirus 3 (18.6% of the clinical cases) and echovirus 7
(13.9% of the clinical cases) were both detected in sewage (3.3
and 34.4% of the typed isolates, respectively). Echovirus 6,
echovirus 12, and coxsackievirus A (unidentified) were detected in
sewage but were not diagnosed in clinical
infections.
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In Milwaukee, peak detection of both clinical and sewage EVs occurred during the summer or early fall and many of the clinically relevant EVs were also detectable in sewage. However, the clinical-sewage correlation was not 100% because a greater number of EV serotypes was detected clinically than in environmental samples and some sewage serotypes were never detected in clinical infections. Also, the type A coxsackieviruses, even when present clinically, were difficult to culture from sewage even when RD cells were used. Thus, if one cannot obtain clinical specimens, a reasonable method by which to determine EV activity would be to try to isolate EVs from local sewage. The reliability of the sewage culture results is improved if more than one cell type is used for EV isolation. While BGM cells are good for isolation of type B coxsackieviruses, many of the echoviruses would have been missed if RD or Caco-2 cells had not been used. However, it is of utmost importance, when using sewage for an EV surveillance system, to assume that the clinical population in question is the population shedding EVs into the sewage. Because the influent sewage samples tested in this study were obtained from a treatment plant that services approximately half of the Milwaukee area population and this laboratory identifies essentially all of the clinical EVs from the Milwaukee metropolitan area, it is probably reasonable to assume that our testing of sewage is a reflection of local EV activity. However, our system is more qualitative then quantitative because many of the important EV parameters, such as the percentage of the population infected by each EV serotype each season, the proportion of those infected with overt clinical disease, the quantity of each EV serotype shed in a stool specimen, the EV serotype-specific inactivation rates during transit to the treatment plant, and the efficiency of recovery of specific EV serotypes by the organic flocculation procedure, are unknown. However, the system used in Milwaukee indicates that many different EV serotypes can be detected in sewage by using the organic flocculation procedure and multiple cell types for isolation of EVs. The usefulness of community sewage testing to monitor the presence of polioviruses in the face of the circulation of wild-type poliovirus in the community has been demonstrated in The Netherlands (17) and Finland (11), and similar testing of sewage may be useful for monitoring of echoviruses and coxsackieviruses.
EVs that are detected in late winter or early spring can at times be predictors of some of the EV types that will be predominant clinically during the following summer. For example, in 1995, echovirus 11 was detected in sewage in March and coxsackievirus B4 was detected in sewage in January, February, and March and these two viruses were the most commonly detected EVs during the following EV season, with the first clinical echovirus 11 case detected in July and the first clinical coxsackievirus B4 case detected in June. However, confounding the interpretation, coxsackievirus B4 was also detected clinically and in sewage in 1994. In the summer of 1996, echovirus 7 was one of the predominant clinical EVs (16.3% of the clinical cases), with the first clinical case in August, but this virus was detected in sewage in February 1996 and was not detected clinically or in sewage in 1995. During 1997, the predominant EV, echovirus 6 (39.4% of the clinical cases), was detected in sewage in April, with the first clinical case reported in June. In 1998, echovirus 30 (46.1% of the clinical cases) predominated and was first detected clinically in June but was detected in sewage in both January and March. Especially noteworthy in 2001 was the appearance of echovirus 13 both clinically (44.1% of the clinical cases) and in sewage (36.2% of the typed isolates). Echovirus 13 was rarely detected in the United States from 1970 until 2001. However, echovirus 13 was detected in sewage in December 2000, long before the first clinical case was detected in July 2001. Echovirus 13 was also isolated from sewage in June 2001. However, each year so many EV serotypes are detected both clinically and in sewage that it is difficult to assign any predictive value to one specific serotype that is detected early in any given year. There are years such as 1998, when echovirus 7 was detected in sewage in January and April but caused no confirmed clinical infections that year. However, echovirus 7 was detected both in sewage and clinically in 1996 and 1997, so the early 1998 sewage detections may have been carryover from community activity in the preceding 2 years. Thus, the prognostic value of early year EV sewage isolates is limited.
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