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Applied and Environmental Microbiology, April 2003, p. 2230-2236, Vol. 69, No. 4
0099-2240/03/$08.00+0 DOI: 10.1128/AEM.69.4.2230-2236.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Division of Microbiology, Department of Basic Veterinary Sciences, University of Helsinki, Helsinki, Finland
Received 26 December 2002/ Accepted 24 January 2003
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S-layers are regular paracrystalline surface protein arrays commonly found in species belonging to all major phylogenetic groups of Bacteria and are an almost universal feature of Archaea (reviewed in reference 32). Most S-layers are composed of a single protein or glycoprotein species that forms the S-layer lattice by an intrinsic self-assembly process. Diverse functions have been proposed for S-layers, like acting as cell-protective coats, molecular sieves, molecular and ion traps, and cell adhesion mediators (reviewed in reference 37).
S-layers are also found in some species of the genus Lactobacillus (24, 44). To date, only a few S-layer genes of lactobacilli have been described (4, 6, 36, 41). The functions of lactobacillary S-layers are poorly known. In Lactobacillus acidophilus, the S-layer has been proposed to mediate binding to avian intestinal epithelial cells (33), and in Lactobacillus crispatus, the S-protein (CbsA) has been shown to mediate binding to collagen (40). Flagellar display experiments with Escherichia coli have shown that the S-layer protein (SlpA) of Lactobacillus brevis ATCC 8287 mediates adhesion to human intestinal cell lines and fibronectin in vitro via a binding region located within the N-terminal part of the SlpA protein (15).
In this report, we describe the successful transfer and expression of the SlpA receptor-binding region in Lactococcus lactis and demonstrate that nonadhesive lactococci can be endowed with the ability to adhere to a human intestinal epithelial cell line and fibronectin with the aid of the SlpA adhesin. L. lactis was chosen as the model host because of its amenability to genetic engineering, the availability of a wide variety of genetic tools for this bacterium, and its wide experimental use as a producer of bioactive molecules.
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TABLE 1. Strains, plasmids, and cell line used in this study
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DNA methods and transformation.
Routine molecular biology techniques were used (2). Enzymes were used as recommended by the manufacturers (Promega, Madison, Wis.; New England Biolabs Inc., Beverly, Mass.). Plasmid DNA was isolated from L. lactis and L. brevis by using the QIAfilter Plasmid Midi Kit (Qiagen GmbH, Hilden, Germany) and 8 mg of lysozyme per ml and from E. coli by using the Wizard Minipreps kit (Promega). L. lactis and E. coli cells were transformed as described by Holo and Nes (14) and Sambrook and Russell (31), respectively. Correct PCR amplification was verified by using an ABI Prism 310 genetic analyzer (Applied Biosystems, Foster City, Calif.) in combination with the DNA sequencing kit for BigDye terminator cycle sequencing (Applied Biosystems).
Construction of plasmid vectors.
The proteinase (prtP) gene sequence of L. lactis subsp. cremoris Wg2 (EMBL accessions number M24767) was used to design primers for the amplification of 0.6- and 1.5-kb prtP spacers. For both prtP spacers, the same downstream primer, 5'-CGAAGAATTCGAGTCGTATCATCCGTGC-3' (EcoRI site underlined), was used for PCR amplification. The upstream primers with an NcoI site (underlined) for the 0.6- and 1.5-kb prtP fragments were 5'-TTACCCATGGGTGCC AATCGAGACC-3' and 5'-CGAACCATGGTCAAGCACCCAACG-3', respectively. Plasmid DNA isolated from strain L. lactis NCDO712 was used as the template in PCRs. The resulting PCR products, 0.6- and 1.5-kb prtP fragments, were treated with Klenow polymerase to generate blunt ends, digested with EcoRI, and cloned into EcoRI- and SmaI-digested pUC19 (41), resulting in plasmids pKTH5042 and pKTH5033, respectively (Table 1). The prtP spacers were isolated as NcoI-EcoRI fragments from pKTH5042 and pKTH5033 and cloned into the NcoI-EcoRI sites of pNG101his (Table 1), resulting in plasmids pKTH5043 and pKTH5046, respectively.
For expression of the mature ß-lactamase protein (Bla), its gene (bla) was PCR amplified from pUC19 by using primers 5'-TACTTCTAGACCACCCAGAAACGCTGG-3' and 5'-ATACTCTAGAGCTTACCAATGCTTAATCAG-3' with an XbaI site (underlined). The approximately 0.8-kb PCR fragment obtained was digested with XbaI and cloned into the XbaI sites of pKTH5043 and pKTH5046, resulting in plasmids pKTH5050 and pKTH5051, respectively.
To create an exact joint between the nisA promoter and the signal sequence of the L. brevis slpA gene, the recombinant PCR technique was applied essentially as described earlier (18). Briefly, the nisA promoter fragment was amplified from pNG101his with primers 5'-CCAAGATCTAGTCTTATAACTATACTG (P1; BglII site underlined) and 5'-TAAACTTGATTGCATGGTGAGTGCCTC (P2), resulting in an approximately 0.2-kb fragment. The DNA region encoding the SlpA signal peptide and the SlpA receptor-binding region (amino acids 31 to 247) were synthesized by using primers 5'-GAGGCACTCACCATGCAATCAAGTTTAAAG-3' (P3) and 5'-CACATCTAGACTGTTATCGTTGGTTGC-3' (P4; XbaI site underlined), resulting in an approximately 0.7-kb fragment. The 0.2- and 0.7-kb PCR fragments were hybridized, and the hybrid formed was extended by DNA polymerase in a PCR without primers, followed by a further PCR amplification in the presence of the primer pair P1-P4. The resulting 0.9-kb fragment was purified, digested with BglII and XbaI, and ligated with BglII-XbaI-digested pKTH5046, resulting in plasmid pKTH5056 (Fig. 1).
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FIG. 1. Schematic drawing of vector pKTH5056, which was constructed for the controlled expression of the surface-anchored adhesion domain of L. brevis SlpA in L. lactis. PnisA, promoter sequence of the nisA gene of L. lactis; AcmA anchor, anchor peptide from the L. lactis acmA gene; PrtP spacer, 515-amino-acid-encoding region of the L. lactis subsp. cremoris Wg2 prtP gene; T, transcription terminator sequence; CmRr, chloramphenicol resistance gene.
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Whole-cell ELISA for detection of cell surface-exposed polypeptides.
Recombinant L. lactis cells harboring pKTH5050, pKTH5051, or pKTH5056 were harvested after nisin induction or overnight incubation. Cell surface-displayed polypeptides were assayed with a whole-cell enzyme-linked immunosorbent assay (ELISA) essentially as described earlier (2a). The primary antibodies used were anti-SlpA serum (41) or anti-Bla serum (kindly provided by Matti Sarvas, National Public Health Laboratory).
Protein analysis.
The total protein extracts were prepared from cells harvested after 4 h of nisin induction. The bacteria were resuspended in 500 µl of digestion buffer (50 mM HEPES [pH 7.0], 20% [wt/vol] sucrose, 5 mM MgCl2, 5 mM CaCl2, 10 mg of lysozyme per ml, 42 U of mutanolysin per ml). The digestion reactions were allowed to proceed for 90 min at 37°C in a water bath before the mixtures were chilled and disrupted by sonication for 30 s, resulting in total protein extracts that were mixed with Laemmli buffer (19).
The cell wall-associated polypeptides were extracted as follows. Recombinant L. lactis cells harboring pKTH5056 were harvested after nisin induction (4 h) or from overnight culture. The bacteria were resuspended in 1 ml of 50 mM HEPES (pH 7.0) and centrifuged. Lactococcal cells were disrupted by homogenization with glass beads in a cell mill (Bühler Vibrogen Cell Mill VL4; Edmund Bühler GmbH, Bodelshausen, Germany) for 60 s and resuspended in 500 µl of 50 mM HEPES (pH 7.0). After centrifugation (1,000 x g, 5 min, 4°C), the supernatant containing the cell walls and membranes was recovered and centrifuged again (18,500 x g, 30 min, 4°C) in order to pellet the cell wall-associated material. The pellet was resuspended in digestion buffer and incubated for 90 min at 37°C in a water bath for solubilization of the cell walls, followed by addition of Laemmli buffer.
The protein samples were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and blotted (MiniProtean II; Bio-Rad) onto nitrocellulose membranes. Polyclonal rabbit anti-SlpA antibodies (40) and horseradish peroxidase-conjugated goat anti-rabbit immunoglobulin G (Bio-Rad) were used as primary and secondary antibodies, respectively. Bands were detected by addition of 4-chloro-1-naphthol (horseradish peroxidase color development reagent; Bio-Rad). Semiquantitation of the S-layer and fusion protein (from plasmid pKTH5056) bands was carried out by using a Multi-Analyst (Bio-Rad). Intensity values (numbers of pixels per unit of band area) were adjusted with cell amounts loaded onto the SDS-PAGE gel.
Immunofluorescence assay for detection of peptides on the cell surface of L. lactis.
Detection of SlpA on the cell surface by immunofluorescence assay was performed essentially as described previously (2a). The slides were incubated for 1 h with undiluted or diluted (1:5 to 1:20 in PBS) anti-SlpA antibody (unspecific binding to L. lactis cells was first removed by incubating the serum with L. lactis NZ9000 cells for 4 h at 4°C) in a moist chamber at 37°C, washed twice with PBS, and finally incubated with fluorescein isothiocyanate-conjugated swine anti-rabbit immunoglobulin G serum (dilution, 1:10; DAKO A/S, Glostrup, Denmark) for 1 h in a moist chamber at 37°C.
Bacterial adhesion assays.
Bacteria were harvested from overnight cultures or after nisin induction. For the assay of adhesion to epithelial cells, bacteria were resuspended in RPMI medium and the optical densities at 600 nm of these suspensions were adjusted to approximately 0.8. From these cell suspensions, 10 µl was added to each well of the Intestine 407 monolayer in microscope slides and incubated for 1 h at 37°C in a moist chamber. After treatment, the monolayers were washed five times with PBS at room temperature for 10 min with gentle agitation and fixed for 10 min with methanol. Air-dried slides were stained with Giemsa (Merck Eurolab, Darmstadt, Germany) and examined by light microscopy.
The statistical significance of the adherence capabilities of the bacterial cells was evaluated by one-way analysis of variance, and pairwise differences between the means of groups were determined by the Tukey HSD test for post-analysis-of-variance pairwise comparisons (available at http://faculty.vassar.edu/lowry/VassarStats.html). Differences were considered significant when P values were less than 0.01.
The ability of anti-SlpA serum to prevent the bacterial adherence to Intestine 407 cells was examined by incubating cells with diluted (1:20 in PBS) anti-SlpA serum (or with PBS as a negative control) for 2 h at room temperature. The bacterial cells were washed with PBS after treatment, resuspended in RPMI medium, and applied to Intestine 407 monolayer as described earlier. Bacterial adherence to Intestine 407 cells was scored as the average number of bacteria attached to one Intestine 407 cell (approximately 100 Intestine 407 cells per sample were counted). Student's t test for unpaired values was used to evaluate the statistical significance of the differences in adhesion of lactococcal cells after anti-SlpA antibody treatment compared with the control (PBS treatment). Differences were considered significant when P values were less than 0.01.
Bacterial adhesion to human plasma fibronectin (Becton Dickinson, Bedford, Mass.) was performed as described before (43), with the following modifications. Fibronectin was used at a surface concentration of 46 fmol/mm2, and the slides were blocked with 1% (wt/vol) blocking reagent (Roche) in PBS and washed twice with 0.25% blocking reagent in PBS and once with PBS. The time of incubation with bacteria in PBS was 3 h, and nonadherent bacteria were removed by washing 3 x 10 min in PBS.
The statistical significance of differences between the abilities of bacteria to adhere to fibronectin was analyzed as described for bacterial adherence to Intestine 407 cells.
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Characterization of surface accessibility with a ß-lactamase reporter.
To establish a reporter system with which to study the utility of the spacers, the ß-lactamase gene (bla) was cloned into pKTH5043 and pKTH5046, resulting in plasmids pKTH5050 and pKTH5051, respectively. Thus, pKTH5050 and pKTH5051 encode a fusion protein consisting of the AcmA signal peptide, the mature ß-lactamase (Bla), one of the PrtP spacers, and the AcmA cell wall anchor. The surface accessibility of Bla in these chimeric fusion proteins was assessed by whole-cell ELISA with anti-Bla antibodies. The color response obtained with nisin-induced L. lactis strain NZ9000 harboring pKTH5051 was clearly more intense than that of L. lactis NZ9000 carrying pKTH5050 and those of uninduced cells (data not shown). The result indicated that the PrtP1153-1668 spacer encoded by the 1.5-kb prtP fragment present in pKTH5051 gave better surface accessibility of Bla than did the PrtP1453-1668 gene product encoded by the 0.6-kb prtP fragment of pKTH5050.
Surface display vector for expression of the SlpA adhesion domain in lactococci.
On the basis of the results obtained with the whole-cell ELISA of L. lactis cells carrying pKTH5051, the SlpA adhesion-mediating region (amino acids 31 to 247) was cloned into pKTH5046, which carries the same 1.5-kb PrtP spacer as pKTH5051 (Table 1). To maintain a homologous signal sequence and a mature protein structure, the acmA signal sequence was replaced with that of the L. brevis slpA gene, resulting in the vector pKTH5056 (Fig. 1).
Cellular localization of the SlpA adhesion domain fused to PrtP and AcmA.
The expression and cellular location of the SlpA-PrtP-AcmA fusion protein were studied with nisin-induced L. lactis NZ9000 cells harboring pKTH5056 by Western blot analysis of total protein extracts and cell wall-associated polypeptides. After separation by SDS-PAGE, blots were probed with anti-SlpA antibodies. As illustrated in Fig. 2 (lane 2), a band corresponding to the expected molecular mass (111 kDa) of the fusion protein was detected among the cell wall-associated polypeptides extracted from L. lactis with pKTH5056. A strong fusion protein band was also detected in the total protein extracts (Fig. 2, lane 1) from induced recombinant L. lactis cells, indicating efficient gene expression from pKTH5056. In contrast, no band corresponding to the fusion protein was detected in the cell wall-associated polypeptide extracts from uninduced L. lactis with pKTH5056 (Fig. 2, lane 3). This assay thus suggested that L. lactis cells transformed with pKTH5056 expressed SlpA adhesion-mediating molecules within its surface structure.
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FIG. 2. Western blot analysis of the SlpA adhesion-mediating region. Total cellular proteins and cell wall-associated polypeptides were extracted from L. lactis NZ9000 cells harboring pKTH5056. The protein samples were prepared from equal amounts of cells as described in Materials and Methods, and samples were separated by SDS-PAGE, electroblotted onto a nitrocellulose membrane, and incubated with polyclonal SlpA antiserum diluted 1:1,000. Lanes: 1, total cellular proteins from nisin-induced recombinant cells; 2, cell wall-associated polypeptides from nisin-induced recombinant cells; 3, cell wall-associated polypeptides from noninduced recombinant cells. Sizes of molecular mass marker proteins are indicated on the left.
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FIG. 3. Whole-cell ELISA for detection of the surface-exposed SlpA adhesion-mediating region encoded by pKTH5056. Anti-SlpA antibody was allowed to bind to lactococcal cells harvested from nisin-induced or uninduced cultures, and after the addition of a horseradish peroxidase conjugate, different lactococcal cell densities were incubated with a chromogenic substrate. Symbols: , nisin-induced NZ9000(pKTH5056); , uninduced NZ9000(pKTH5056). OD600, optical density at 600 nm.
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FIG. 4. Immunofluorescence microscopy of recombinant L. lactis NZ9000 cells harboring pKTH5056 (A) and wild-type L. lactis NZ9000 (B). Recombinant cells were harvested after overnight nisin induction, and wild-type cells were harvested after overnight incubation. Both cell types were treated with anti-SlpA antibodies (diluted 1:20 in PBS) and a fluorescein isothiocyanate-conjugated secondary antibody. Both pictures were taken after 16-s exposures. Magnification, x4,300.
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FIG. 5. Adherence of recombinant and wild-type L. lactis NZ9000 cells to Intestine 407 cells. The mean number of adherent lactococcal cells per Intestine 407 cell was determined from 16 randomized microscopic fields and is illustrated for L. lactis NZ9000 cells harboring no plasmid (bar 1), pKTH5046 (nisin induced) (bar 2), pKTH5056 (nisin induced) (bar 3), pKTH5056 (nisin induced and incubated with anti-SlpA antibodies before the adhesion assay) (bar 4), or pKTH5056 (nisin induced and incubated with PBS before the adhesion assay) (bar 5). The results shown are group means with 95% confidence intervals.*, P < 0.01.
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FIG. 6. Adhesion of recombinant L. lactis NZ9000 cells carrying pKTH5056 (A) and wild-type L. lactis NZ9000 (B) to Intestine 407 cells. Recombinant lactococcal cells were incubated with PBS for 2 h before the adhesion assay. Magnification, x4,500.
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FIG. 7. Binding of recombinant and wild-type L. lactis NZ9000 to immobilized fibronectin. Means and standard deviations of bacterial numbers in 20 randomly chosen 4 x 102-µm2 microscopic fields are shown for L. lactis NZ9000 harboring no plasmid (bar 1), pKTH5046 (nisin induced) (bar 2), pKTH5056 (nisin induced) (bar 3), or pKTH5056 (uninduced) (bar 4). The concentration of bacteria was 5 x 108 ml-1. The results shown are group means with 95% confidence intervals. *, P < 0.01.
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In this work, we have demonstrated that the N-terminal region of the S-layer protein of L. brevis can be used to transform a naturally nonadhesive lactic acid bacterium into an adhesive one. This was achieved by constructing a surface display vector, pKTH5056, encoding the SlpA receptor-binding region as a fusion protein with the spacer and cell wall-anchoring regions of PrtP and AcmA, respectively. We used L. lactis as the host because this organism does not adhere to Intestine 407 cells (A. Palva et al., unpublished results), a wide range of genetic tools with which to study it are available, it has been successfully used for surface display of heterologous proteins (13, 26, 39), and it is being developed as a mucosal delivery vehicle (38, 42).
The cell wall attachment of the receptor-binding region of SlpA was accomplished by using an expression vector that has the cell wall-anchoring sequences of the L. lactis acmA gene (5). The AcmA repeat cell wall anchor has been previously used for surface expression of the Bacillus licheniformis
-amylase and the E. coli ß-lactamase (5). The mechanism by which the acmA-encoded attachment domains interact with the cell wall components is unknown, but the interaction has been suggested to be noncovalent in nature (reviewed in reference 21).
A 515-amino-acid PrtP1153-1668-encoding region of the prtP gene of L. lactis subsp. cremoris Wg2, tested to allow efficient surface expression with the Bla reporter protein in pKTH5051, was used as the spacer protein to properly extend the SlpA receptor-binding region out of the cell surface. Surprisingly, with the shorter 215-amino-acid PrtP1453-1668 spacer tested, no surface expression of ß-lactamase could be demonstrated. In addition to the length and conformation of a spacer, the nature of the protein to be surface displayed and its interactions with the cell wall molecules also affect the design of the spacer. The 515-amino-acid spacer amplified from the C terminus of the prtP gene spans the putative H domain and part of the W domain determined from PrtP of L. lactis strain SK11 (35). The function of the putative H domain has not been determined, but it has been suggested to act as a spacer directing other PrtP domains farther from the cell wall (35). In putative H domains, alpha-helixes are the dominant secondary structure. Spacers consisting of alpha-helixes of different lengths and origins have recently been used to enhance the expression of M6 protein on the cell surface of Streptococcus gordonii (3).
We chose a 247-amino-acid-long N-terminal region, including the signal peptide of 30 residues, from the L. brevis SlpA protein for surface expression and adhesion studies with L. lactis. This region was previously shown to include the receptor-binding region of SlpA, which reacts with fibronectin and several human epithelial cell types, by using a flagellar display system in E. coli (15). With flagellar display experiments, the binding domain of SlpA could be limited to 81 amino acid residues representing residues 96 through 176 in the unprocessed SlpA protein (15).
In the cell adhesion tests (Fig. 5), some adhesion background with NZ9000 carrying the control vector (pKTH5046) was observed. This is likely due to some aggregation observed both with the control and test vector-carrying strains. However, in the fibronectin assay (Fig. 7), where the lactococci were subjected to gentle agitation during propagation, the aggregation was not significant. Accordingly, the difference between the binding backgrounds with the control strains was almost nonexistent, demonstrating the specificity of the fibronectin binding.
Even though a significant ability to adhere to human epithelial Intestine 407 cells could be provided to L. lactis by the aid of the SlpA adhesion-mediating region, the epithelial cell-binding efficiency of L. lactis harboring pKTH5056 was substantially lower than that of the wild type L. brevis cells synthesizing a surface layer estimated to consist of approximately one-half million SlpA subunits (Palva et al., unpublished; 15). One obvious explanation for this is that the amount of the pKTH5056-encoded region of SlpA in L. lactis is only a few percent of the SplA subunits present in the native S-layer in L. brevis. We cannot, however, rule out the possibility that the receptor-binding domain of SlpA is more effective when displayed at a high density in the S-layer lattice. The assumption that entire S-layers possess more efficient binding capacity than their protein subunits is also supported by the results of studies of the expression of the collagen-binding CbsA protein of L. crispatus in Lactobacillus casei. CbsA was anchored with the cell wall-sorting signal of PrtP to the cell wall and successfully expressed in L. casei, but no S-layer was formed and the amount of collagen bound was smaller than that observed with wild-type L. crispatus (23).
This work was supported by the Academy of Finland (grants 40836 and 44602).
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