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Applied and Environmental Microbiology, November 2004, p. 6495-6500, Vol. 70, No. 11
0099-2240/04/$08.00+0 DOI: 10.1128/AEM.70.11.6495-6500.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Department of Ocean, Earth and Atmospheric Sciences, Old Dominion University, Norfolk, Virginia,1 Delaware Center for the Inland Bays,2 Graduate College of Marine Studies, University of Delaware, Lewes, Delaware3
Received 25 April 2004/ Accepted 18 July 2004
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2 ppt). We also investigated the potential for smaller, recreational vessels to transport and distribute Aureococcus. During the summer of 2002, 11 trailered boats from the inland bays of Delaware and coastal bays of Maryland were sampled. Brown tide was detected in the bilge water in the bottoms of eight boats, as well as in one live-well sample. Commercial ships and small recreational boats are therefore implicated as potential vectors for long-distance transport and local-scale dispersal of Aureococcus. |
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If we consider that ballast and bilge tanks are dark, aerobic environments, the likely survivors of ballast transit (apart from cyst formers) are those phytoplankton species that have alternative modes of nutrition (hetero- or mixotrophy) and/or the ability to survive long-term darkness. The brown tide organism, Aureococcus anophagefferens (referred to below as Aureococcus), fits both of these criteria, since it is able to grow with organic enrichment (3, 9, 14, 18) and at low light (35) and it is able to survive at least 30 days in complete darkness (39). Brown tides have had significant detrimental impacts on the benthic communities in Narragansett Bay in Rhode Island, the bays of Long Island in New York, and New Jersey (5), causing eelgrass dieback (due to decreased light penetration) and starvation and recruitment failure of commercially important scallop and mussel populations (7, 43).
New data suggest that there has been a dramatic extension of the known range of Aureococcus on the east coast of the United States (40). Previously, this organism was known to exist in shallow estuaries from New York to Maryland but not further south (1). The newly defined range extends from Florida north to New Hampshire (40), and blooms are now being recorded in Virginia's coastal bays (4). Blooms have also recently been observed in Saldanha Bay in South Africa (36, 38, 42). Thus, the distribution of brown tide seems to be rapidly increasing both within and outside the United States, suggesting that there is an anthropogenic dispersal vector, exploitation of a niche in previously uninhabited environments, or both.
In this study, we tested the hypothesis that brown tide is transported long distances via ships' ballast water and on the local scale via recreational boats. This species is small (diameter, approximately 2 to 4 µm) and difficult to detect directly by regular microscopic observation, particularly at low background cell levels. To confirm the presence of the organism, we used an Aureococcus-specific primer for detection in ballast water by PCR amplification of the 18S rRNA gene. Aureococcus concentrations in bilge water of recreational boats were determined by quantitative real-time PCR by using a species-specific molecular probe (40).
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Presence of Aureococcus during vessel transit through the Great Lakes.
In October 2001, we sampled a commercial vessel during its transit through the Great Lakes. The ship was initially sampled in the Port of Hamilton as a NOBOB vessel (i.e., residual water was collected). The forepeak tank was then partially filled with harbor water (freshwater) and resampled approximately 1 m below the surface (zero time), and then it was sampled again in the Port of Windsor on day 6 and in the Port of Chicago on day 10.
Presence of Aureococcus in small boats.
We sampled trailered small boats as they emerged from Delaware's inland bays and Maryland's coastal bays. Visits to Indian River Marina (in Delaware) and Ocean City (in Maryland) in the summer of 2002 yielded samples from 11 vessels. Permission was requested from recreational boaters before water was collected. Just after a boat was pulled up the ramp, the aft bung was unscrewed, and water from the bottom of the boat was collected directly in a clean sampling bottle. For one boat an onboard live well (approximately 0.25 m2 of storage space filled with seawater and used for carrying fish or bait) was also sampled to determined whether it contained brown tide. A water sample was also collected adjacent to the boat ramp at each marina in order to determine whether Aureococcus was present in local water at the time.
Nucleic acid extraction and DNA amplification.
Water samples were stored in coolers filled with water or ice to keep them at ambient temperature. Between 100 and 300 ml of each water sample was prefiltered through 20- and 5-µm-pore-size polycarbonate filters (Osmonics, Livermore, Calif.) to remove larger planktonic species and detritus. The 5-µm-pore-size filtrate was then filtered through 1-µm-pore-size polycarbonate filters to collect the plankton size fraction that included Aureococcus (diameter, 2 to 4 µm). The 1-µm-pore-size membranes were placed in 0.6 ml of cetyltrimethylammonium bromide (CTAB) extraction buffer (100 mM Tris-HCl [pH 8], 1.4 M NaCl, 2% [wt/vol] cetyltrimethylammonium bromide, 0.4% [vol/vol] ß-mercaptoethanol, 1% [wt/vol] polyvinylpyrrolidone) (11), heated to 50°C for 20 to 40 min, and stored at 80°C until extraction. All samples were heated in a 65°C water bath for 5 to 10 min immediately before extraction. Nucleic acids were extracted as described previously (10) and were diluted to a concentration of 25 ng/µl for amplification.
For ballast water samples DNA (50 ng) was amplified by PCR in 20-µl reaction mixtures consisting of 0.5 U of Taq polymerase (Promega, Madison, Wis.), 1x Taq polymerase buffer (Promega), 2.5 mM MgCl2, each deoxynucleoside triphosphate at a concentration of 200 nM, 0.5 µM Aureococcus-specific primer Aa1685F (5' ACCTCCGGACTGGGGTT 3') (40), and 0.5 µM universal eukaryotic primer EukB (5' GATCC[A/T]TCTGCAGGTTCACCTAC 3') (34) as a reverse primer (representing a total of 122 bp). The PCR consisted of 35 cycles of 30 s at 94°C, 30 s at 56°C, and 1 min at 72°C, followed by a 5-min extension at 72°C. PCR products were fractionated on a 2% agarose gel, stained with ethidium bromide, and visualized with a transilluminator. To verify the presence of Aureococcus, bands were sequenced and compared with previously published sequences (accession numbers AF117776 to AF117779, AF119119, AF118443, and AAU40257).
For recreational boat samples, DNA (62.5 ng) was amplified by quantitative PCR by using the same primers (Aa1685f and EukB) and a species-specific molecular probe (40). The concentration of Aureococcus was then estimated by the method described previously (40).
cDNA synthesis.
Since RNA is more labile than DNA, the RNA pool in a nucleic acid sample is contributed primarily by those organisms that are metabolically active and transcribing RNA (29, 41). Therefore, to test for the presence of viable Aureococcus, samples determined to be positive by PCR were assayed by reverse transcription-PCR. Along with the ballast water samples, four samples from the small-boat survey were also subjected to reverse transcription-PCR as positive controls. About 100 ng of total nucleic acids was treated for 15 min at room temperature in 10-µl reaction mixtures containing 1 U of DNase (Invitrogen, Carlsbad, Calif.) and 1x DNase buffer. EDTA was added to a final concentration of 2.5 mM, and the DNase was inactivated by incubation at 65°C for 15 min. RNA was reverse transcribed in 20-µl reaction mixtures containing 200 U of Superscript III (Invitrogen), 1x buffer, each deoxynucleoside triphosphate at a concentration of 0.5 mM, 100 ng of random hexamers (Invitrogen), 10 mM dithiothreitol, and 2 U of RNaseOut (Invitrogen). The reaction was carried out at 50°C for 1 h, followed by 15 min at 70°C to inactivate the reverse transcriptase. RNA was removed by RNase H treatment at 37°C for 20 min. cDNA was amplified as described above.
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FIG. 1. Mean temperatures and salinities of ships' ballast tanks in which Aureococcus (brown tide) was detected (solid bars) and not detected (open bars). The error bars indicate standard deviations. *, differences were significant (T statistic = 3.89; P < 0.01; n = 18).
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TABLE 1. Ballast activity of ships in which Aureococcus (brown tide) was detected and not detected
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TABLE 2. Ship specifications for ballast water samples in which Aureococcus (brown tide) was detected and not detected
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Presence of Aureococcus in small boats.
Sampling compliance during the small-boat survey was excellent. Of 20 people approached, only 1 refused to participate, and another 8 who were amenable to our sampling had boats either with no water or with not enough water for a sample. In the boats sampled, Aureococcus was detected in the bilge water in 8 of 10 cases, as well as in the one live-well sample which we collected. Two of the recreational boat samples had Aureococcus concentrations below the detection limit, five had concentrations of 1 to 25 cells ml1, and four had concentrations of 100 to 400 cells ml1 (Fig. 2). Interestingly, the concentration of Aureococcus in the live-well sample (sample B4 from Indian River Marina) was higher than the concentration found in the water tested at the marina. Further investigation of four samples that were positive for brown tide (highest cell abundance) showed that cells had Aureococcus-specific RNA, which demonstrated that metabolically active cells were present (Fig. 3).
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FIG. 2. Concentrations of Aureococcus found in marinas and recreational boats. IR, Indian River Marina; OC, West Ocean City Marina. Recreational boat samples B1 to B5 were collected at Indian River Marina, and samples B6 to B11 were collected at West Ocean City Marina. The error bars indicate standard deviations for duplicate samples.
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FIG. 3. Results obtained with molecular probes for Aureococcus (brown tide) in water samples from three small boats. D, DNA amplification; R, cDNA amplification; P, positive control; N, no-reverse-transcriptase control. Lane M, DNA ladder; lanes 1 to 3, bilge water collected at Indian River Marina in Delaware (sample B1 in Fig. 2); lanes 4 to 6, live-well water collected at Indian River Marina (sample B4 in Fig. 2); lanes 7 to 9, bilge water collected at West Ocean City Marina in Maryland (sample B8 in Fig. 2); lane 10, positive control; lane 11, negative control (no transcript).
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5 ppt is remarkable and suggests that this information should be taken into consideration as new ballast regulations are developed (26). For non-cyst-forming phytoplankton such as Aureococcus, the presence of a large initial population entrained in the ballast tank is likely key to successful transport and introduction, given the exponential decay of photosynthetic organisms during ballast tank confinement (13). Current ballast water management procedures recommend that vessel captains avoid algal blooms when they load ballast (25). However, for Aureococcus, it appears that temperature may also be an important physiological constraint on survival in ballast tanks (Fig. 1). Brown tide was not detected in ballast water having temperatures below 17.6°C, which is consistent with its temperature response in laboratory cultures (the optimal temperature for growth ranges from 20 to 25°C [8]). Other characteristics, such as the ability to survive in the dark and the ability to utilize organic substrates, may also facilitate ballast transport of Aureococcus. However, Aureococcus survives best in the dark at low temperatures (e.g., 6 and 12°C), presumably due to the decrease in metabolic activity, and addition of organic substrates has no effect on survival (39).
One of the most intriguing aspects of this organism's survival in ballast water is its apparent tolerance of low salinities (Fig. 1), in contrast to its salinity preferences in the field (18 to 32 ppt) (1) and in culture (>22 ppt) (8). Brown tide was found in vessels with residual water salinities ranging from 2 to 34 ppt (Fig. 1), and in both cases when viable cells were detected, the tanks had taken on freshwater ballast during the last two ballast operations. In a previous study (40), Aureococcus was detected in locations that were periodically fresh (i.e., tidally influenced), but brown tide blooms have not occurred at these sites. Thus, it appears that Aureococcus is tolerant of low salinities in ballast tanks (perhaps due to buffering properties of the sediments) and can survive a 30-day exposure to 2-ppt ballast water. However, based on culture data (no growth at a salinity of 0 ppt) it is unlikely that cells would grow after delivery to the freshwater Great Lakes.
Of the six commercial ships containing Aureococcus (Table 1), only one had previously taken on ballast water in a port (Philadelphia) that overlaps the alga's currently recognized distribution (the east coast of the United States and Saldanha Bay in South Africa) (40). However, during the eastern seaboard survey of Popels et al. (40), relatively high cell densities were found in waters of the Delaware continental shelf, suggesting that brown tide may be an oceanic species rather than a coastal species. The implication is that ballast exchange (occurring in waters >200 nautical miles offshore), which is generally practiced as a barrier to future invasions by estuarine species, may actually increase the abundance of Aureococcus in ships' ballast tanks rather than decrease it through displacement or osmotic shock.
With respect to its origin and dispersal, Aureococcus is estimated to have been present in Quantock Sound in New York for over 100 years (17), based on the presence of a unique sterol found in sediments (16). Furthermore, the small amount of sequence variation in 14 Aureococcus strains (18S ribosomal DNA gene) isolated from New York (2) caused Popels et al. (40) to design a species-specific molecular probe for a conserved region in the 18S ribosomal DNA sequence. However, the disjunct global distribution of Aureococcus may suggest that there was relatively recent introduction to South Africa, and the evidence provided here indicates that ships' ballast water could be a transport vector. Current investigations involving comparisons of DNA sequences of different geographic strains should help clarify whether Aureococcus is indeed an introduced species in South Africa (L. Botes, personal communication) rather than cryptogenic (a species which is neither clearly native nor clearly introduced [6]).
In this study, PCR techniques were used to detect Aureococcus and estimate its viability. Such molecular techniques provide an extremely powerful and efficient tool for the detection and quantification of microorganisms compared to traditional microscopic and cultural methods (10, 19, 20). Furthermore, these techniques are uniquely suited to analysis of ballast water and sediment samples in which viable target organism abundance may be below the level of microscopic detection, yet still pose a threat to human health or the environment. We detected the DNA of Aureococcus in eight ballast tanks of the commercial ships sampled (Table 1); however, we detected RNA (which is more labile than DNA [29, 41]) from only two tanks, suggesting that most Aureococcus cells present in our ballast water samples were inactive. Given the great disparity between the number of samples in which Aureococcus was viable and the number of samples in which it was detected, we suggest that studies to assess the metabolic activity or capacity for growth as a means of estimating invasive potential are warranted.
Aureococcus was present at both marinas where small boats were surveyed. Furthermore, boats were sampled immediately after they came out of the water, so it was not surprising that the recreational boat samples contained viable cells of Aureococcus, either in the bilge or in live-well water. Given the likelihood that recreational boaters will use their vessels in multiple locations on any given day or weekend or within the same month and the likelihood that that they will not fully drain or rinse their boats with freshwater, there is great potential for small boats to distribute the brown tide organism. A quantitative risk assessment could be achieved by sampling boats before they are launched at various marinas to test for the presence of viable cells, and boat owners could be interviewed and asked when and where they last used their boats.
The presence of a relatively high concentration of Aureococcus in the live-well sample also has implications for the alga's potential introduction with bait or its dispersal by commercial bait vendors. Other instances of such hitchhikers (e.g., macrophytes [27]) suggest that this is a real possibility. These findings add to those of previous studies which demonstrated the potential for recreational boaters to facilitate the spread of previously introduced species (e.g., zebra mussel into inland water bodies from Lake Michigan [37]) and highlight the importance of educating recreational boaters about their role in species dispersal.
Conclusions.
To our knowledge, this is the only study that has demonstrated the presence of viable harmful microbes in ships' ballast water and small-boat bilge and live-well water. The variable presence of Aureococcus in paired ballast water tanks on the same ship, as well as in different ships, indicates the importance of tracking the history of individual tanks when workers attempt to determine outcomes of ballast management practices. With respect to risk assessment, current models incorporate the number of propagules at transit end points (32); however, this study shows that the number of viable propagules (2 of 19 tanks; 11%) is likely a better predictor of potential invaders.
This work was conducted under the multi-institutional Great Lakes NOBOB Project funded by the Great Lakes Protection Fund, the National Oceanic and Atmospheric Administration (NOAA), the U.S. Environmental Protection Agency, and the U.S. Coast Guard. The project was comanaged by the Cooperative Institute of Limnology and Ecosystems Research and the NOAA Great Lakes Environmental Research Laboratory and was sponsored under cooperative agreement NA17RJ1225 from NOAA's Office of Oceanic and Atmospheric Research. Additional funding for this project was provided by the Delaware Center for the Inland Bays and Delaware Sea Grant RB/41 to D.A.H. and S.C.C.
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