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Applied and Environmental Microbiology, July 2004, p. 4111-4117, Vol. 70, No. 7
0099-2240/04/$08.00+0 DOI: 10.1128/AEM.70.7.4111-4117.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Department of Food Science, The Royal Veterinary and Agricultural University, Frederiksberg,1 Department of Molecular Characterization, Bioneer A/S, Hørsholm, Denmark,2 Department of Agricultural Sciences, Imperial College London, Wye Campus, Ashford, Kent, United Kingdom3
Received 11 November 2003/ Accepted 29 March 2004
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In food preservation MAP is frequently used for fresh muscle foods and ready-to-use vegetables stored and displayed at chill temperatures (12). The solubility of CO2 increases at low temperatures (29), and it has recently been demonstrated that bacterial growth inhibition is proportional to the concentration of CO2 dissolved in the water phase of a food matrix (8). The solubility of CO2 is increased at neutral pH, high water activity, high buffer capacity, and high headspace-to-sample ratio (29).
Listeria monocytogenes is a food-borne pathogen that can cause the severe human infection listeriosis (2). Cases of listeriosis caused by the consumption of contaminated meat or meat products have been reported since the 1990s (13), and several national prevention programs have been initiated (15). The organism is able to grow in the presence of CO2 at low temperatures (2). CO2 concentrations above 70% (N2 balance gas) are required to inhibit growth of L. monocytogenes (11, 17, 20, 27, 43) at chill temperatures (<7°C), but even at such high CO2 concentrations, the presence of just 5% O2 may allow growth (43). This extent of adaptability makes L. monocytogenes a good candidate in which to study the CO2 response.
Despite the many observations on CO2-induced growth inhibition little is known of the mechanisms involved. It has been hypothesized that CO2 inhibits growth of bacteria by (i) changing the conformation of cellular enzymes and thereby decreasing the rate of the metabolic reactions (36); (ii) CO2 product repression of carboxylases and decarboxylases (25); (iii) disrupting cell membrane structural integrity and/or specific functions (40); (iv) decreasing intracellular pH, which demands that ATP is used for reestablishing pHi rather than for growing (44); or (v) some combination of these mechanisms (9). It was reported recently that glutamate decarboxylase is essential for survival of L. monocytogenes in strong acid (6). If CO2 growth-inhibition is caused by acidification of the environment, the cells will most likely use this mechanism to reestablish pHi and maintain growth. As it seems probable that bacteria have a multifaceted response towards CO2, we conducted several parallel experiments to examine the atmosphere-induced responses in acid-sensitive and acid-tolerant L. monocytogenes strains. The purpose of the present study was to compare the changes in metabolism, membrane lipid fatty acyl (FA) composition, and expression of specific genes in air, 100% N2, and 100% CO2.
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Culture conditions.
Preinoculum was prepared from a frozen stock (80°C) using a standard procedure with incubation of cells in 10 ml of brain heart infusion (BHI) (Merck, Darmstadt, Germany) at 10°C for 7 days. BHI was used as medium for growth experiments, while a defined medium (IMM [35]) was used for metabolic studies. Cultures were enumerated on tryptone soy agar plates (Oxoid, Basingstoke, United Kingdom). Listeria selective base (Oxford Formula; Oxoid) was used for tentative verification of Listeria.
Examination of CO2-induced changes in primary metabolism.
L. monocytogenes 412 and EGD were grown in IMM at 10°C from an initial cell density of 105 CFU/ml. Each strain was incubated aerobically in conical flasks shaken at 200 rpm or statically (anaerobically) in jars (Oxoid) filled with 100% CO2 or 100% N2. Duplicate experiments were performed. The jars were evacuated and filled with gas three times to ensure that the atmospheres were O2 free. Samples were harvested once in the lag phase, twice in the exponential growth phase, and three times in the stationary phase. The optical density at 600 nm (OD600), pH, and the number of CFU were determined at the time of harvest. A sample volume of 1.5 ml was filter sterilized and stored at 20°C until analysis. Metabolites were identified by high-performance liquid chromatography as described by Holm Hansen et al. (18).
Examination of CO2-induced changes in isocitrate dehydrogenase (IDH) activity. (i) Growth conditions.
L. monocytogenes 412 was grown in BHI from an initial cell density of 105 CFU/ml at 10°C in six anaerobic atmospheres (100% CO2, 80% CO2, 60% CO2, 40% CO2, 20% CO2, or 0% CO2, with N2 as the balance gas) and three aerobic atmospheres (air, 79% CO2-21% O2, or 79% CO2-2% O2, with N2 as the balance gas). Three test tubes, each containing 10 ml of inoculum, were placed in each of eight anaerobic jars, and three test tubes were incubated in air. Each jar was evacuated three times and then filled with one of the eight atmospheres using CO2, O2, and N2 gas (Hede Nielsen, Horsens, Denmark) and a gas mixer (MAP MIX 9000; PBI Dansensor A/S, Ringsted, Denmark). All samples were incubated at 10°C. The IDH activity level, total cell protein, OD600, CFU, medium pH, and cell morphology were examined at the time of sampling.
(ii) Preparation of enzyme.
Late-exponential-phase cultures were diluted to an OD600 of 0.250 in a cuvette, transferred to Eppendorf tubes, and centrifuged (17,320 x g, 5 min). The bacterial pellet was washed twice in 1 ml of 0.005 M sodium phosphate buffer, and this was followed by centrifugation (17,320 x g, 5 min). The pellet was resuspended in 0.5 ml of 0.005 M sodium phosphate buffer, and 0.3 g of glass beads (diameter, 106 µm; acid washed; catalog no. G-4649; Sigma Aldrich, Vallensbak Strand, Denmark) was added. The bacterial cells were homogenized with four bursts of 45 s using a Fastprep FP120 (KemEnTech, Copenhagen, Denmark). Between the homogenizations, the cells were placed on ice. The cell lysate was centrifuged (17,320 x g, 10 min) and the supernatant containing the enzyme was transferred immediately to a fresh Eppendorf tube.
Determination of enzyme activity.
IDH catalyzes the conversion of isocitrate + NADP+ (Mn2+ excess) to
-ketoglutarate + CO2 + NADPH. The activity level was measured using an IDH kit (Sigma Aldrich) and total cell protein was determined using a protein assay (Bio-Rad, Hercules, Calif.). The enzyme activity was calculated as the conversion of millimoles of NADP+ to NADPH per minute per milligram of total cell protein. Purified IDH (Sigma Aldrich) served as the positive control. Two independent experiments with three replications were conducted.
Examination of CO2-induced changes in the membrane.
From standard preparations of preinoculum, L. monocytogenes LO28 and EGD at 105 CFU/ml, respectively, were inoculated in BHI or BHI with a pH of 5.7 (adjusted with 2 M HCl). The cultures were incubated in 100% CO2, air, or 100% N2 (a total of four combinations: 100% CO2, air, 100% N2, and 100% N2 pH 5.7) at 10°C until the late exponential growth phase. Since preliminary experiments showed that constant flushing of CO2 over BHI lowered the pH of the medium to 5.7, the acidic-anaerobic condition (N2 pH 5.7) was used to mimic the environment created by CO2.
Bacteria were harvested from 1.5-liter cultures by centrifugation (8,000 x g, 15 min, 4°C). The pellet was washed, centrifuged, resuspended in 16 ml of chloroform-methanol-0.1 N HCl (1:2:0.8, by vol), and 3 g of glass beads (0.10 to 0.15 mm diameter; acid-washed; Sigma Aldrich) was added. The mixture was placed on ice for 60 min, during which time it was mixed frequently. Chloroform and 0.1 N HCl was added to obtain a chloroform-methanol-0.1 N HCl ratio of 1:1:1 (by vol). The suspension was vortexed and centrifuged (2,000 x g, 3 min), and the chloroform phase (lower liquid phase) was transferred to a new tube. Six milliliters of chloroform was added to the original tube. The lower chloroform phase of this second extraction was transferred to the tube containing the chloroform phase from the first extraction. The lipids were dried under nitrogen, resuspended in chloroform-methanol (9:1, vol/vol), dried under nitrogen, and stored at 20°C in a small volume of the solvent mixture. The lipid FA composition was analyzed using capillary gas chromatography as described by Ntougias and Russell (33).
Examination of CO2-induced changes in gene expression.
L. monocytogenes LO28 and EGD were grown as described for the analysis of membrane composition. At the time of sampling, 16 ml of culture was harvested by centrifugation (14,300 x g, 2 min, 4°C). The tubes were quickly placed on ice, the supernatant was discarded, and the pellet was immediately frozen in liquid nitrogen. The tubes were stored at 80°C. Total RNA for gene expression analyses was extracted from the cultures according to the procedure described by Gravesen et al. (16).
The effects of atmosphere on expression of genes involved in acid stress response (gadA, gadB, and gadC) and virulence (prfA, actA, hly, mpl, plcB, inlA, inlB, inlC, inlC2, inlD, inlE, inlF, and lmaA) were compared for L. monocytogenes LO28 and EGD, respectively, using a DNA microarray. Microarray fabrication, preparation of in vitro transcribed control RNA, preparation of labeled cDNA, microarray hybridization, data analysis, and statistical analysis were all performed as described by Gravesen et al. (16).
Data analysis.
Using SAS software (SAS Institute, Cary, N.C.) linear model analyses were conducted to determine significant effects of atmosphere. In addition, t tests were carried out to determine statistically significant grouping in the data material.
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FIG. 1. Growth (); consumption of glucose ( ); and production of lactic acid , acetic acid ( ), acetoin (x), formic acid ( ), and ethanol (+) as a function of time for L. monocytogenes 412 (a) and L. monocytogenes EGD (b) grown in IMM (35) at 10°C in three atmospheres.
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FIG. 2. IDH activities in L. monocytogenes 412 grown in aerobic CO2-containing atmospheres (light bars) or anaerobic CO2-containing atmospheres (dark bars) in BHI at 10°C. Each bar represents the average of six determinations.
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TABLE 1. Membrane FA composition of two L. monocytogenes strains grown under various conditionsa
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TABLE 2. Expression of genes associated with acid sensitivity and virulence in L. monocytogenes grown in BHI at 10°C to the late exponential growth phase in different atmospheresa
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Enzyme activity.
The IDH enzyme was chosen for several reasons: (i) it catalyzes a CO2-producing reaction and is therefore assumed to be affected by CO2 (22, 25), (ii) it only catalyzes one reaction, (iii) the enzyme was known to exist in the organism (14, 41), and (iv) an IDH kit was commercially available. The slight but significant increase in IDH activity in the presence of CO2 and oxygen is in contrast to the findings in the gram-negative Pseudomonas aeruginosa (25) but in accordance with those in the yeast Sclerotium rolfsii (28). Although the observed differences were not statistically significant for the anaerobic cultures, the observed changes were consistent in replicate experiments (i.e., the lack of statistical significance is not the result of some positive and some negative differences), and they are therefore regarded as being trends worth noting. Based on the examination of this one enzyme which catalyzes a CO2-producing reaction, our results cannot necessarily be extrapolated to carboxylases and decarboxylases in general (22, 25). The results can, however, possibly be linked to the observed changes in the gene expression and cell membrane as suggested at the end of this discussion.
Membrane changes.
Comparing aerobic growth with growth in CO2, L. monocytogenes LO28 responded to in the latter by producing a membrane lipid FA composition containing less branched-chain and more straight-chain components. This should render the membrane less fluid; however, there are also changes in minor components, particularly the unsaturated fatty acids, which more than double in their proportion, and no overall change in the FA equivalent chain length (ECL). It is not possible to say whether the reduction in proportion of anteiso-branched relative to iso-branched fatty acids (fluidity decreasing change) would counteract the increase in unsaturated fatty acids (fluidity increasing change), without biophysical measurements of fluidity parameters. Comparison of the data for growth in air or CO2 with the controls in N2 (neutral pH) or N2 pH 5.7 shows that the fatty acid changes are likely to be largely but not entirely due to the reduction in pH caused by CO2 rather than the CO2 per se. This observation was confirmed by growing cultures aerobically in air with the pH adjusted to 5.7, when similar fatty acid compositional changes were obtained to those in CO2 or in N2 at pH 5.7 (data not shown).
Like Nilsson et al. (32), we also observed an increase in the shorter-chain fatty acids 12:0 and 14:0 during growth in CO2, and our results indicate that this is a response to acidification of the culture medium. The increases we observed were much smaller than those of Nilsson et al., but it is difficult to make further comparisons since the method employed in our study allows us to identify a larger percentage (>97%) of the fatty acids. It is well documented that a15:0, i15:0, and a17:0 are the major fatty acids in the Scott A strain and other strains of Listeria (31, 42) and that a15:0 has a particular role in growth at low temperature (1, 31) and regulation of membrane fluidity (10). Our data for the relative percentages of the major anteiso- and iso-branched 15:0 and 17:0 fatty acids in strain LO28 are comparable to those found by Nichols et al. (31) in the Scott A strain.
Although the EGD strain of L. monocytogenes had a very similar membrane lipid FA composition to that of L. monocytogenes LO28, the pattern in variation differed. There were no significant differences (P > 0.05) in the proportion of total branched-chain or unsaturated fatty acids, their mean chain length (ECL) (Table 1), or the relative proportions of anteiso- and iso-branched fatty acids. However, the response to CO2 of the major fatty acid, a15:0, was an increase in contrast to L. monocytogenes LO28, where the relative amount decreased. Variations in fatty acid composition of different strains of Listeria and their response to stress factors such as temperature and salt have been noted by other researchers (38).
In summary, our results on CO2-induced changes in membrane composition indicate that these are associated with the acidification created by the gas. We have not found a clear link between the action of CO2 and changes in membrane fluidity. If such a connection exists it has to be detected by direct biophysical measurements.
Gene expression.
The glutamate decarboxylase complex is essential for survival of L. monocytogenes in strong acid (6), and the expression of gadA, gadB and gadC in strains LO28 and EGD, respectively, grown in CO2 is in accordance with the recently reported natural gad content of the two strains (6). The similarity in response towards CO2 and N2 pH 5.7 showed that L. monocytogenes LO28 responded to CO2 as it would to acid using the gad system. Connections between acid tolerance and glutamate decarboxylase have previously been discussed for Clostridium perfringens (7) and shown for Escherichia coli (4, 5, 45) and Lactococcus lactis (39). The lack of gadA and gadC expression in L. monocytogenes EGD indicates that this strain maintains growth in CO2 in another and less efficient manner. The fact that there was no difference in end product formation or the expression of gad in cultures grown in CO2 or N2, indicates overlapping between the CO2 response and the response to acidity and anaerobiosis, respectively.
Increased virulence has been reported for an acid-insensitive strain of L. monocytogenes (34), and diminished virulence has been reported for a very acid-sensitive mutant derived from L. monocytogenes LO28 (30). There is, however, no information on the pathogenicity of CO2-adapted cells. We have shown that the individual CO2-stressed cell may have a higher expression of internalin A, while the expression of other virulence-associated genes were unaffected. Since a recent study by King et al. (26) indicated that CO2 stress causes a decrease in survival in vitro in bile and acid systems, it seems unlikely that CO2 will increase the virulence of the cell.
Hypothesis for the CO2 responses in acid-tolerant strains.
A strain-dependent CO2 response was observed. In the acid-tolerant strains LO28 (6) and strain 412 (A. Gravesen and S. Knøchel, personal communication), it was possible to link some of the changes in order to suggest how growth is maintained in CO2. The acid-tolerant strain LO28 presumably used glutamate decarboxylase (glutamate
-amino butyric acid [GABA]) to reestablish pHi (overexpression of gadB) in CO2. It is currently unknown if glutamate is supplied similarly in different strains. We have evidence of increased glutamate import in strain LO28 (overexpression of gadC) and indications of increased glutamate production in strain 412 since the activity level of IDH (isocitrate
-ketoglutarate) was increased. If the flux through isocitrate
-ketoglutarate and glutamate
GABA increases, it seems logical to presume that the flux through the whole isocitrate
-ketoglutarate
glutamate
GABA pathway increases. The production of branched-chain fatty acids in the membrane is linked to the turnover of
-ketoglutarate
glutamate by glutamate dehydrogenase and we would expect them to alter in concert. However, the amount of branched-chain fatty acids decreased, indicating that the glutamate dehydrogenase activity was low. The situation seems therefore more complex. The cell can use other sources for the supply of glutamate, and if glutamate is partly supplied via production, it may happen through alternative pathways, e.g., isocitrate
-ketoglutarate
2-oxoglutaramate
L-glutamine
glutamate. The enzyme glutamine synthetase, which catalyzes L-glutamine
glutamate, is present in L. monocytogenes (www.genome.ad.jp).
Strain EGD has previously been observed to respond differently to CO2 (23) than do the strains with high acid tolerance. No changes were observed in the amount of branched-chain fatty acids and the expression of genes encoding GAD in the acid-sensitive L. monocytogenes EGD. This shows that L. monocytogenes EGD maintains growth in CO2 by other means, e.g., a more general stress response that includes filamentation. The genome of L. monocytogenes EGDe indicates the presence of gadB' and gadC' homologues, but these have not been investigated specifically and their potential involvement is currently not known.
In conclusion, our investigations have shown that it is necessary to investigate more strains in order to characterize the CO2 response in L. monocytogenes since it is to some extent strain dependent. The acid-tolerant strain LO28 showed the same response to CO2 and CO2-mimicking environments, whereas the acid-sensitive strain EGD showed different responses to these two atmospheres. A genome-wide analysis would be a significant step towards understanding the diversity of the response.
Lene Gertman, Tina Birk, Line Brorsen, and Anne-Marie Reeh Scheibelein are acknowledged for technical assistance. Peter Nissen is acknowledged for help with the high-performance liquid chromatography analysis. Julie Coleman and Mark H Bennett, Imperial College London, Wye Campus, are acknowledged for assistance provided with purification of membrane lipid fatty acids and gas-chromatographic analyses, respectively.
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