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Applied and Environmental Microbiology, January 2005, p. 255-260, Vol. 71, No. 1
0099-2240/05/$08.00+0 doi:10.1128/AEM.71.1.255-260.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Laboratoire de Microbiologie et de Technologie des Fermentations, Unité Mixte de Recherches "Sciences pour l'
nologie," Institut National de la Recherche Agronomique, Montpellier, France
Received 23 March 2004/ Accepted 27 August 2004
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Metabolic interactions in mixed strain bacterial cultures and between fungi and bacteria have been identified (12, 26, 30, 41, 43, 47), but studies of such interactions in mixed yeast strain cultures are not common. In one study of mixed strain cultures for enological purposes, an exchange of metabolites between strains was observed (20). A mathematical model also is available to simulate growth in a mixed culture of strains of S. cerevisiae with and without the KII killer toxin (28, 31), but this model is limited to the interactions due to the toxic effect of the killer toxin.
The impact of cofermentation of S. cerevisiae with other yeast species on the final organoleptic balance of the wine also has been studied. Most of these studies focused on the effects of sequential inoculation with these yeasts on the wine produced, since the growth of most indigenous non-Saccharomyces species is limited on fermentation media and is rapidly inhibited by ethanol (3, 13, 18, 29, 44, 50). In all of these studies, the analysis focused on the fermentation products and not the fermentation kinetics. Interactions between Saccharomyces strains may occur in mixed cultures (7, 20), but the underlying mechanisms have not been investigated in detail.
The objective of the present study is to understand the effect of metabolite diffusion between partners of yeast cocultures, with a special emphasis on the effect on fermentation kinetics, by-product formation, and yeast persistence in the fermentation medium. Our working hypothesis is that metabolite diffusion may occur between two yeast strains, in this case a strain of S. cerevisiae and a natural S. cerevisiae-Saccharomyces uvarum hybrid (24), with different physiological properties during alcoholic fermentations under enological conditions. The knowledge of the underlying mechanism(s) responsible for this symbiotic interaction could be of particular importance in understanding the process through which indigenous S. cerevisiae strains colonize complex fermentation media, for explaining the observed persistence of indigenous S. cerevisiae strains during fermentations inoculated with pure Saccharomyces starter cultures, and for the design of more efficient starter cultures.
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Culture media.
All media were heat sterilized (at 110°C for 20 min). The yeast strains were grown in a standard nutrient medium, YPD [10 g of yeast extract (Difco, Detroit, Mich.) per liter, 20 g of Bacto peptone (Difco) per liter, and 50 g of glucose per liter]. A synthetic fermentation medium (SM), pH 3.3, was used to simulate standard grape juice (5). This medium contained (per liter) 200 g of glucose, 6 g of citric acid, 6 g of DL-malic acid, 750 mg of KH2PO4, 500 mg of K2SO4, 250 mg of MgSO4 · 7H2O, 155 mg of CaCl2 · 2H2O, 200 mg of NaCl, 4 mg of MnSO4 · H2O, 4 mg of ZnSO4, 1 mg of CuSO4 · 5H2O, 1 mg of KI, 400 µg of CoCl2 · 6H2O, 1 mg of H3BO3, 1 mg of (NH4)6Mo7O24 · 2H2O, 20 mg of myo-inositol, 2 mg of nicotinic acid, 1.5 mg of calcium pantothenate, 250 µg of thiamine-HCl, 0.25 mg of pyridoxine-HCl, 3 µg of biotin, and 300 mg of NH4Cl. A selection medium (N-E-D) was used to differentiate between the two yeast populations in the mixed culture. This medium contained (per liter) 10 g of yeast extract (Difco), 20 g of Bacto peptone (Difco), 20 g of glycerol, and 10 g of agar in Sörensen buffer (50 mM Na2HPO4 and 50 mM NaH2PO4, pH 6.25). Following sterilization, this medium was supplemented with final concentrations of 2 g of erythromycin (in 100% ethanol) per liter and 8 mg of diuron (in 100% acetone) per liter. In the absence of diuron and erythromycin, the selection medium is referred to as N medium.
Growth conditions.
Yeast cells were precultured in 50 ml of YPD medium at 28°C without agitation for 24 h in 200-ml Erlenmeyer flasks. The fermentation medium was inoculated with 106 yeast cells ml1. Yeast cells were cultured anaerobically in handmade glass fermentors (working volume, 1.1 liters) fitted with fermentation locks (CO2-bubbling outlets filled with water). Fermentations were carried out under isothermal conditions (24°C) with continuous magnetic stirring (500 rpm).
Cell number, viability, and culture composition.
Cells were sonicated (30 s, 10 W), and cell number and volume were determined by using an electronic particle counter (model ZB2; Beckman-Coulter, Margency, France) fitted with a 100-µm-pore-size probe. Cell viability was determined by plating approximately 250 cells (the actual number was determined by electronic particle counting) on petri dishes containing YPD medium supplemented with 20 g of agar per liter. These petri dishes were incubated at 28°C for 60 h, and the numbers of colonies were counted. The relative proportion of the two strains in the mixed cultures was determined by plating approximately 250 cells (the actual number was determined by electronic particle counting) on petri dishes containing either N or N-E-D medium. Both strains could grow on the N medium, but only D254 9a2 could grow on the N-E-D medium.
Fermentation kinetics.
The amount of CO2 released was calculated from automatic measurements (taken every 20 min) of fermenter weight (39). Loss of ethanol and water due to CO2 stripping accounted for less than 2% of the total weight loss. The rate of CO2 production was calculated by polynomial smoothing of the last 10 fermenter weight measurements. The frequency of the measurements of fermenter weight and the precision of the balance (accurate to ±0.01 g) allowed the rate of CO2 production to be calculated with a high degree of precision and reproducibility [coefficient of variation for d(CO2/dt)max = 0.8% (39)]. The fermentation progress, FP, was calculated from the amount of CO2 released from the culture medium according to the following equation:
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Identification of fermentation by-products.
Residual sugars and several organic acids were measured by high performance liquid chromatography according to the method of Reyes et al. (34). The analysis was performed on an Aminex HPX87-H column (Bio-Rad) at 45°C. The isocratic mobile phase was 0.008 N sulfuric acid in degassed, deionized water filtered through a membrane filter (pore diameter, 0.45 µm). The flow rate was 0.6 ml min1 at a pressure of 70 x 105 Pa. Sugars and organic acids were detected simultaneously by refractometry (Agilent G1362A 1100 series; Hewlett Packard, Wilmington, Del.) and UV spectroscopy (280 nm) (Agilent G1314A 1100 series; Hewlett Packard), respectively. Measurements were calibrated with the following standard solution: 1.4% (vol/vol) ethanol, 20 g of glucose per liter, 7.2 g of malic acid per liter, 0.95 g of acetic acid per liter, 0.96 g of succinic acid per liter, and 8.4 g of glycerol per liter. The supernatants of the fermentation media were filtered and diluted at least five times with the mobile phase before analysis. Acetaldehyde dehydrogenase activity was assayed and used to estimate the acetaldehyde concentration. The reaction mixture contained 0.9 mM NAD, 50 mM KH2PO4, and 4.3 mM dithiothreitol in 100 mM triethanolamine buffer (pH 8.0). The reaction was initiated by the addition of 0.4 U of acetaldehyde dehydrogenase. The amount of NADH produced by the reaction was detected by fluorescence spectrophotometry (excitation wavelength, 340 nm; emission wavelength, 460 nm) with a Perkin Elmer LS 50B fluorescence spectrophotometer.
Rapid extraction of metabolites by quenching in cold methanol.
Metabolites were extracted as described by Gonzalez et al. (19): 10 ml of yeast culture was added to 26 ml of an ice-cold solution containing 60% (vol/vol) methanol and 70 mM HEPES (pH 7.5) and kept at 80°C until further use. The mixture was centrifuged at 5,000 x g for 30 s at 10°C. Cell pellet metabolites were extracted with 5 ml of a solution of 75% (vol/vol) boiling absolute ethanol containing 0.25 M HEPES (pH 7.5) and incubated for 5 min at 80°C. Extracts were placed on ice for 3 min and then dried for 5 min under vacuum at 70°C in a rotating evaporator (model Laborota 4000; Heidolph Instruments LLC, Cinnaminson, N.J.). The resulting residue was resuspended in a final volume of 1 to 2 ml of distilled water and stored at 80°C until use.
Measurements of intracellular NAD(H) and NADP(H) concentrations.
Metabolite concentrations were determined from NADH- or NADPH-coupled enzyme assays as described below. The amount of NADH or NADPH produced during the reaction was determined by fluorescence spectrophotometry (excitation wavelength, 340 nm; emission wavelength, 460 nm) with a Perkin Elmer LS 50B fluorescence spectrophotometer. Unless otherwise stated, enzyme assays were performed at 30°C in a reaction buffer containing 5 mM Tris-NH4Cl (pH 7.0), 0.5 mM dihydroxyacetone phosphate, and 0.5 mM
-ketoglutarate, as described by Klingenberg (25). Aliquots of 50 to 300 µl of the extracted metabolite samples were added to 1.9 ml of the reaction buffer, and a baseline reading was obtained. Twenty microliters of a 0.2 mM NADH standard solution and 20 µl of a 0.2 mM NADPH standard solution were added to give a final molarity of 4 nmol of each cofactor. NADH oxidation was initiated by the addition of 10 µl of glycerol-3-phosphate dehydrogenase (170 U ml1; Roche catalogue no. 127 124). NADPH oxidation was initiated by the addition of 10 µl of NADPH-dependent glutamate dehydrogenase (240 U ml1; Roche catalogue no. 127 734). NAD concentration was determined as described by Bergmeyer (6). The reaction buffer contained 0.2 M glycine (pH 9.0), 0.4 M hydrazine hydrate, and 0.2 M ethanol. The reaction was initiated by the addition of 10 µl of alcohol dehydrogenase (882 U ml1; Roche catalogue no. 127 540). NADP concentration was determined as described by Holzer et al. (22). The reaction mixture contained 10 mM Tris-MgSO4 (pH 7.0) and 5 mM glucose-6-phosphate. The reaction was initiated by the addition of 10 µl of glucose-6-phosphate dehydrogenase (70 U ml1; Roche catalogue no. 127 671). Cell sizes were similar in both strains studied (data not shown). Cell metabolite concentration (in millimolars) was calculated by using an estimated internal volume of 4.5 µl/108 cells for both strains (40). Metabolite extractions and measurements were performed in triplicate.
Measurement of cellular NAD(P)H fluorescence.
Cellular NADH (and NADPH) fluorescence was determined with a method adapted from that of Beauvoit et al. (4). Cells were harvested from a 2-ml culture sample and immediately suspended in a final volume of 2 ml of CMP buffer (31 mM citric acid, 45 mM DL-malic acid, 10 mM KH2PO4 [pH 3.3]). The fluorescence of NADH (bound and free forms) was monitored at 30°C with a fluorescence spectrophotometer (Perkin Elmer LS 50B). The excitation wavelength was 340 nm, and fluorescence was continuously monitored at 460 nm. Measurements were calibrated by determining the fluorescence of cells in a fully oxidized state (high NAD to NADH ratio) and of those in a fully reduced state (low NAD to NADH ratio). As previously described (4, 36), the fully oxidized state was obtained by adding an excess of acetaldehyde (3.5 mM), and the fully reduced state was obtained by adding an excess of ethanol (50 mM) and glucose (50 mM).
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FIG. 1. Cell population during fermentation of a monoculture of strain S6U ( ), a monoculture of strain D254 9a2 ( ), and a mixed culture () inoculated with an equal amount (50:50) of each strain. Points represent the means and standard deviations of three different fermentations. Lines represent the best-fit growth curves calculated by a five-parameter sigmoid function. Stacked bars represent the respective proportion of each strain within the mixed culture as determined by differential plating (filled area, strain S6U; open area, strain D254 9a2). The strains were anaerobically cultured in SM at 24°C. All media were inoculated with 106 cells ml1.
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FIG. 2. Fermentation kinetics of a monoculture of strain S6U ( ), a monoculture of strain D254 9a2 ( ), and a mixed culture (). For the mixed culture, the inoculum contained equal amounts of the two strains. The strains were anaerobically cultured in SM at 24°C. All media were inoculated with 106 cells ml1. For clarity, only 50 of the 350 data points collected are shown. Since the coefficient of variation for d(CO2/dt) with this technique was previously observed to be 0.8% (39), the results of only one experiment are given.
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FIG. 3. Intracellular content of NAD, NADH, NADP, and NADPH. , monoculture of strain S6U; , monoculture of strain D254 9a2; , mixed culture. For the mixed culture, the inoculum contained equal amounts of the two strains. The strains were cultured anaerobically in SM at 24°C. All media were inoculated with 106 cells ml1. The mean and standard deviation of three replicates for each point are shown.
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FIG. 4. Cellular fluorescence during fermentation. Fluorescence of harvested cells suspended in CMP buffer was monitored at 460 nm (excitation wavelength, 340 nm). Strains were cultured anaerobically in SM at 24°C. All media were inoculated with 106 cells ml1. In preliminary experiments, spectrofluorimetric measurements were calibrated by adding 50 mM glucose and 50 mM ethanol (fully reduced state, 100%) or 3.5 mM acetaldehyde (fully oxidized state, 0%) before recording fluorescence. When the fermentation progress reached 0.6 (black arrow), cells were harvested by centrifugation (3,000 x g, 5 min, 24°C) and resuspended in a volume of fresh SM containing no nitrogen and 80 g of glucose per liter and 7% (vol/vol) ethanol. Points represent the means and standard deviations of three different fermentations. , monoculture of strain S6U; , monoculture of strain D254 9a2; , mixed culture. For the mixed culture, the inoculum contained an equal amount of each strain.
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30% of the total population of the mixed culture, the acetaldehyde production profile of the mixed culture was very similar to that of the D254 9a2 culture.
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FIG. 5. Acetaldehyde content of the media during fermentation. , monoculture of strain S6U; , monoculture of strain D254 9a2; , mixed culture. For the mixed culture, the inoculum contained an equal amount of each strain. Values are the means and standard deviations of three different fermentations. The strains were cultured anaerobically in SM at 24°C. All media were inoculated with 106 cells ml1.
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The present report demonstrates a clear exchange of an electron acceptor between two different yeast strains during alcoholic fermentation, as has been suggested by others (20). This exchange could alter the behavior of the mixed culture. Previous studies have shown that a continuous perfusion of monoculture fermentation medium with acetaldehyde decreases glycerol production and increases acetate and butanediol production (37, 38). This phenomenon was observed on three different yeast strains. In the present study, we did not observe any changes in glycerol or butanediol production (data not shown). Therefore, although both acetaldehyde exchange between two yeast strains and continuous perfusion with acetaldehyde increase the fermentation rate, they lead to the formation of different end products. Acetaldehyde from a natural source produced in situ might affect yeast metabolism differently than does its exogenous addition, but further research is needed to test this hypothesis.
Acetaldehyde is considered to be a leakage product of alcoholic fermentation by yeasts. Acetaldehyde is unique in that it is highly reactive and biologically toxic. Acetaldehyde also is very polar and may cause water stress in yeasts (21). There are large species and strain differences in acetaldehyde production by yeasts from 0.5 to 700 mg of acetaldehyde per liter (27). Exogenously added acetaldehyde at a concentration of
400 mg/liter lengthened the lag phase and decreased the exponential specific growth rate of S. cerevisiae in a medium lacking ethanol (45). In contrast to this inhibitory effect, low levels of acetaldehyde may stimulate yeast growth. For example,
580 mg of acetaldehyde per liter shortens the lag phase and increases the specific growth rate of S. cerevisiae in the presence of 3 to 6% (vol/vol) ethanol, although not in its absence (45, 49). In addition, very low levels of acetaldehyde (<100 mg/liter) were found to greatly reduce the lag phase of ethanol- or temperature-stressed S. cerevisiae (46). Thus, acetaldehyde seems to alleviate ethanol-induced growth inhibition. An early study showed that exogenously added acetaldehyde at a concentration of 1,000 mg/liter reduced the fermentation rate of glucose by S. cerevisiae by 30% (17). From a more fundamental point of view, such an addition of acetaldehyde initiates a transcriptional response in yeast cells that changes the expression of HSP genes (1), the genes encoding aldehyde dehydrogenases (ALD genes [2]) in order to allow the cells to use ethanol and acetaldehyde as carbon and energy sources under several circumstances.
Collectively, these data suggest that the yeast response to acetaldehyde utilizes the same mechanisms that participate in the response to other forms of stress. Thus, acetaldehyde exchange between strains could inhibit the growth of some yeast strains while encouraging the growth of others. This phenomenon could be particularly important for understanding the ecology of the colonization of complex fermentation media by S. cerevisiae after the elimination of non-Saccharomyces yeasts. During spontaneous fermentations, a succession of different indigenous S. cerevisiae yeasts could be observed throughout the fermentation stationary phase, although no arguments were found to explain such behavior (16, 48). When fermentations are inoculated with pure Saccharomyces starter cultures, the persistence of several indigenous S. cerevisiae strains during fermentation may also be observed (16). These two examples could represent interesting models for determining the role of acetaldehyde during fermentation.
There is great variation in metabolic capability among isolates of naturally occurring S. cerevisiae. The variation includes significant heterogeneity among strains in the production of ethanol, acetic acid, sulfite, and other products of metabolism (10). To our knowledge, there are very few data on the production of acetaldehyde during the colonization of complex fermentation media. The initial acetaldehyde level in a fermentation medium could encourage the growth of S. cerevisiae yeasts, e.g., D254 9a2, that can function as receptor strains and utilize the acetaldehyde produced. To test this hypothesis, effort should be made to develop a bioreactor in which differential growth of a yeast strain in a homogenous fermentation medium can be established. We are now testing a two-reservoir, hollow-fiber bioreactor (28) for use in the study of the dynamics of such mixed populations.
Over 200 different wine yeast strains are currently available for use in ADY starters; however, their physiological differences have not been systematically evaluated (9, 14, 15, 24, 32, 42). Empirical experiments have been conducted on both the laboratory and commercial scale on the effect of changes in the yeast population on the reliability of mixed fermentations and on the quality of the wines produced (13, 29, 44, 50). From a technological point of view, more ADY starters containing different mixtures of wine yeast strains are likely to be introduced to the market. Thus, the potential interactions between the yeast strains used and the potential effects (detrimental or otherwise) on the final product need to be evaluated. Including strains with opposite acetaldehyde-producing properties in the same starter could bloom the wine yeast, resulting in a higher fermentation rate or improved organoleptic properties. A general survey of the acetaldehyde-producing properties of and the physiological response to acetaldehyde of all of the commercially available wine yeast strains would therefore be valuable.
nologie," INRA, 2 place Viala, F-34060 Montpellier Cedex 1, France. Phone: 33 499 61 25 05. Fax: 33 499 61 28 57. E-mail: jmsalmon{at}ensam.inra.fr. |
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