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Applied and Environmental Microbiology, November 2005, p. 6816-6822, Vol. 71, No. 11
0099-2240/05/$08.00+0 doi:10.1128/AEM.71.11.6816-6822.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Karen A. Cloud-Hansen,
John Carpenter,
and
Carolyn J. Hovde*
Department of Microbiology, Molecular Biology, and Biochemistry, University of Idaho, Moscow, Idaho 83844-3052
Received 15 February 2005/ Accepted 20 July 2005
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The low prevalence of culture-positive animals and the inability to culture E. coli O157:H7 routinely from the farm environment has hampered efforts to study the ecology of this human pathogen. These limitations led us to take advantage of the conditions in a research barn housing cattle experimentally dosed with E. coli O157:H7. In this setting, mature cattle were individually housed, and records of their carriage of E. coli O157:H7 and the conditions of their immediate environment were available. Because the research barn is similar to many private cattle facilities and is open air, it was representative of the microcosm typical of domestic cattle. In this study, we (i) investigated the distribution and survival of E. coli O157:H7 in the environments of fecal culture-positive animals by systematically culturing feed, bedding, water, haircoat, and feed bunk walls for E. coli O157:H7; (ii) determined the ability of E. coli O157:H7 to survive in feed and bedding inoculated with laboratory-grown strains under various temperature and sunlight conditions; and (iii) investigated the role of urine in environmental survival and replication of E. coli O157:H7.
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Oral inoculations of steers with E. coli O157:H7.
Each steer was orally dosed with 1.0 x 109 to 1.0 x 1010 CFU of E. coli O157:H7, ATCC strain 43894, as previously described (8). This strain was chosen because of its relevance to human disease and much previous work with this strain in cattle. Seventeen weeks after this first oral dose of E. coli O157:H7, when all animals were culture negative for the bacteria, the steers were redosed once with 1.0 x 109 to 1.0 x 1010 CFU of E. coli O157:H7 (ATCC 43894).
Environmental sampling.
Before their use in the facility, fresh feed, water, and bedding were tested for the presence of E. coli O157:H7 (culture methods are given below). To determine the distribution of E. coli O157:H7 in the steers' environments at a time when fecal counts most closely reflected field conditions, environmental sampling was begun 7 weeks following their initial oral dose of bacteria. Fecal samples and each type of environmental sample were collected weekly.
Samples of bedding (2 to 3 g each) that were free of visible feces were collected from 10 sites in each pen, for a total of 25 g of bedding per sample. Sterile cotton swabs were used to swab a 400-cm2 area of the interior feed bunk surface. Haircoat samples (1 g of matted hair) were removed from the abdomen or perianal region with a scalpel. If no matted hair was present, 1 g of loose hair was removed by rubbing a gloved hand over the entire animal. Three milliliters of saliva was collected from each animal 4 days postdose. A piece of wide Tygon tubing was offered to chew, and dripping saliva was collected in a sterile tube. The saliva samples were cultured as described below in "Culture of E. coli O157:H7". Water samples (100 ml each) were collected in a sterile container from each bucket before the water was changed and the bucket was cleaned. Water sediment samples (0.1 g each) were removed from the bottom of the emptied bucket with a sterile cotton swab.
Experimentally contaminated feed and bedding.
To determine the survival of E. coli O157:H7 in feed and bedding under a variety of conditions, E. coli O157:H7 at high or low concentrations was inoculated into samples of feed and bedding and held inside a barn, outside a barn in sunlight, or inside the laboratory (25°C) and sampled periodically for 60 days. High and low concentrations were chosen based on accounts of naturally occurring coliform and E. coli counts. Cattle feeds were frequently found to contain 104 to 105 CFU E. coli/g and as high as 107 CFU E. coli/g. Also, similar studies of sawdust bedding frequently found coliform counts in the range of 106 to 107 CFU/g.
An overnight culture of E. coli O157:H7 (ATCC 43894) grown in Luria broth (LB) was pelleted, washed with sterile saline solution, and resuspended. To approximate a natural level of contamination, the initial concentrations of 103 CFU/g of bedding and 103 CFU/g of feed were used and referred to as low inoculation. For the bedding experiment, this cell suspension was diluted in saline (60 ml) and mixed with 2.0 kg of cedar chip bedding in a 5-gallon plastic container. For the feed experiment, washed cells were suspended in saline (80 ml) and mixed with 1.41 kg of chopped grass hay. Postinoculation samples of bedding and feed were collected for culture daily for the first 4 days, then every 3 or 4 days for 3 weeks, and then every 10 days until day 60.
To determine the survival of E. coli O157:H7 in feed and bedding after inoculation with higher concentrations of bacteria, 1.45 kg of bedding was mixed with stationary cells suspended in a total volume of 100 ml in a 5-gallon plastic container to give an initial concentration near 106 CFU/g. Similarly, a 900-g sample of feed was mixed with stationary cells to give an initial concentration near 107 CFU/g. Inoculated feed and bedding were held inside a barn at ambient temperatures.
All experimentally inoculated feed and bedding samples were collected aseptically by taking 1- to 1.5-g portions of feed or bedding from 10 different sites in the bucket being sampled and placing them into a sterile Whirlpak bag. From this mixture, a 10-g sample was cultured for E. coli O157:H7 as described below for fecal samples.
Culture of E. coli O157:H7. (i) Fecal samples.
Feces were tested by a culture method comparable in sensitivity to O157-specific immunomagnetic bead capture and culture (9). Samples were cultured by direct plating that yielded quantitative culture data (in CFU per gram) or selectively enriched by incubation overnight prior to plating that yielded qualitative (positive or negative) culture data. Briefly, feces (10 g) were suspended in Trypticase soy broth (50 ml; BBL/Becton Dickinson) supplemented with cefixime (50 µg/liter; Lederle Laboratories, Pearl River, NY), potassium tellurite (2.5 mg/liter; Sigma Chemical Co., St. Louis, MO), and vancomycin (40 mg/liter; Sigma) (TSB-CTV). Dilutions of each sample were prepared in sterile saline (0.15 NaCl) before (direct culture) and after (enrichment culture) overnight incubation with aeration at 37°C. Before incubation, dilutions were spread plated on sorbitol MacConkey agar containing 4-methylumbelliferyl-ß-D-glucuronide (100 mg/liter; Biosynth Ag Biochemica and Synthetica, Stokie, IL) (SMAC-MUG; direct culture). After incubation, dilutions were plated on sorbitol MacConkey agar supplemented with cefixime (50 µg/ml), potassium tellurite (2.5 mg/liter), and MUG (100 mg/liter) (designated SMAC-CTM; enrichment culture). Colonies that did not ferment sorbitol or utilize MUG were confirmed to be E. coli O157 by a latex agglutination test (Pro-Lab Diagnostics, Toronto, Canada).
(ii) Environmental samples.
Bedding samples (each, 25 g) were suspended in TSB-CTV (500 ml). Dilutions of each sample were prepared in sterile saline (0.15 M NaCl) before and after overnight incubation with aeration at 37°C. Dilutions from bedding samples were cultured as described for fecal samples (above). Feed bunk samples (swab of 400 cm2) were streaked directly onto SMAC-MUG plates and then placed in 50-ml culture tubes; TSB-CTV (10 ml) was added. After overnight incubation, dilutions were made and plated on SMAC-CTM. The hair samples (1 g) were each suspended in TSB-CTV (50 ml) and processed as described for fecal samples (above). The water samples (100 ml) were added to 2x TSB-CTV (100 ml) and processed as for fecal samples. Water bucket sediment swabs were streaked onto SMAC-MUG plates then placed into 50-ml culture tubes, and TSB-CTV (10 ml) was added. Isolation of E. coli O157:H7 from this point was identical to that for fecal samples.
Urine and cedar chip bedding experiments.
To determine the effect of urine on E. coli O157:H7 survival and growth, the bacteria were mixed with urine, dilute urine, or mixtures of cedar chip bedding with or without urine. Before each experiment, urine and bedding samples were tested for the presence of E. coli O157:H7 as described above. Bedding samples (10 g) were moistened with either sterile deionized water (100 ml), undiluted urine (100 ml), or 10% urine (100 ml). Moistened bedding was inoculated with 103 CFU of E. coli O157:H7 and incubated without aeration at room temperature (25°C) or at 37°C. Six strains of E. coli O157:H7 were tested: ATCC 43894; ATCC 43895; ATCC 43888; 905, a clinical isolate from a patient with hemolytic-uremic syndrome and a gift from M. K. Waldor, Tufts-New England Medical Center and Howard Hughes Medical Institute, Boston, MA; WSU180, a natural bovine isolate from a dairy heifer at Washington State University, Pullman, WA; and 96-014, a clinical isolate and a gift from P. Tarr, Washington University, St. Louis, MO. At 0-, 3-, 6-, 9-, 12-, and 24-h intervals postinoculation, samples were plated onto SMAC-CTVM, and the number of E. coli O157:H7 was determined as described above for direct culture of bedding samples. Experiments were done with bovine urine from cattle fed a grass hay ration or human urine from a consenting volunteer. Urease activity was tested by culture in urea medium (Diagnostic Systems, Sparks, MD).
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Environmental components were frequently culture positive when cattle feces were culture negative for E. coli O157:H7.
The environment around cattle with high or low numbers of fecal E. coli O157:H7 were analyzed (Tables 1 and 2). Seven weeks after a single oral dose of the bacteria, animals were culture negative or were shedding low numbers of fecal bacteria (Table 1). Two animals, numbers 1 and 4, were consistently culture negative for E. coli O157:H7 for the next 8 weeks, and the environmental samples from their pens were also culture negative except for one water column (WC) sample (Table 1). The environmental samples had low numbers of E. coli O157:H7 and required enrichment culture to detect the bacteria. Bedding was the most common environmental sample to be culture positive. Interestingly, one bedding sample was positive by direct culture and contained 103 E. coli O157:H7/g, even though the steer in that pen had been fecal culture negative for the bacteria for 2 weeks (animal 6 at week 12).
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TABLE 1. Fecal and environmental culture results for eight individually penned steers with low numbers of fecal E. coli O157:H7 long after oral inoculation
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TABLE 2. Fecal and environmental E. coli O157:H7 culture results for eight individually penned steers early after oral inoculation
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E. coli O157:H7 can survive for 35 days in cedar chip bedding and for 60 days in grass hay feed.
To determine the survivability of E. coli O157:H7 in bedding and feed without contribution of an animal, bedding and feed samples held in the laboratory or in the barn but without animal contact were inoculated with the bacteria, and samples were cultured at various times. All of the experimentally inoculated samples showed decreasing numbers of E. coli O157:H7 over time (Tables 3 and 4). Cedar chip bedding samples inoculated with high or low concentrations of E. coli O157:H7 and held at room temperature (25°C) were culture positive for 35 or 18 days, respectively. Bedding samples inoculated with low concentrations of E. coli O157:H7 were culture positive for shorter durations of at least 11 or 14 days when held inside or outside the barn, respectively. Core temperatures of bedding samples sheltered inside the barn ranged from 16°C to 35°C and of bedding samples held outside ranged from 16°C to 36°C. After inoculation with high concentrations of E. coli O157:H7, chopped grass hay feed held inside the laboratory was culture positive for the duration of the study (42 days). After inoculation with low concentrations of E. coli O157:H7, chopped grass hay feed samples were culture positive for at least 14 days when held inside the barn, 31 days when held outside, and 60 days when held in the laboratory (Table 2). Core temperatures of feed samples sheltered inside the barn ranged from 17°C to 32°C; core temperatures of exposed feed samples held outside ranged from 17°C to 44°C.
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TABLE 3. Survival of E. coli O157:H7 in cedar chip bedding
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TABLE 4. Survival of E. coli O157:H7 in grass hay feed
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FIG. 1. Growth of E. coli O157:H7 in bedding moistened with water or dilute bovine urine. Average of the log10 CFU of E. coli O157:H7/g of inoculated bedding moistened with sterile water or 10% bovine urine. Samples were incubated at 25°C for 24 h or at 37°C for 12 h. Results from three experiments are shown and standard errors were <0.3 log10 CFU/g.
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FIG. 2. E. coli O157:H7 strain variation in growth in bedding moistened with urine. Sterilized cedar chip bedding was moistened with 10% (A and C) or 100% (B and D) solutions of fresh, filter-sterilized bovine urine. Moistened bedding was inoculated with 102 CFU E. coli O157:H7/g with each of the following strains: ATCC 43894, ATCC 43895, ATCC 43888, 905, WSU180, or 96-014. After thorough mixing, samples were incubated without aeration at 25°C (A and B) or 37°C (C and D) for 24 h. The CFU of E. coli O157:H7 per gram of bedding was determined by plating serial dilutions on selective medium (SMAC-CTVM) and was confirmed by latex agglutination tests. Experiments were done in triplicate, and representative results are shown.
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TABLE 5. Growth of E. coli O157 in bovine urine and urea solutions
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Among the types of environmental samples examined, E. coli O157:H7 was isolated most frequently from cedar chip bedding. The steers in this study were maintained separately, so that contamination of bedding in a pen was unlikely to come from any source other than the animal within that pen. Because of the open-air nature of the housing facility, contamination from avian sources could not be ruled out, but surveys of bird feces have detected only a very low prevalence of E. coli O157:H7 (10, 15, 29). Furthermore, many animal exhibits featuring ruminants are not bird proof but do pen animals individually, similar to this experimental situation. We did not find routine or gross contamination of the animal hides which may be attributed to the individual penning arrangement, a situation very different from feedlot group penning.
Survival of pathogenic E. coli strains in several types of animal bedding, other than cedar chips, has been documented. A field study of environmental sources of E. coli O157:H7 on a heifer raiser farm in Italy found 6 of 16 straw bedding samples to be positive for E. coli O157:H7 (5). A longitudinal study of commercial dairy farms showed the use of sawdust, rather than sand, bedding was associated with a higher prevalence of fecal E. coli O157:H7 among dairy cows (17). The ability of E. coli to survive and replicate in different types of bedding was examined for a strain of E. coli isolated from a clinical bovine mastitis case (31). In pine sawdust bedding at 37°C, counts of this strain of E. coli underwent rapid log reductions during the first 12 h. In the present pen study, we were unable to study the long-term survival of E. coli O157:H7 in bedding or feed in the setting of the barn because all used bedding was removed and replaced on a weekly basis and the feed was completely consumed by the steers on a daily basis. Although we observed lengthy survival times of E. coli O157:H7 in cedar chip bedding (at least 34 days) and in grass hay feed (>42 days) into which the bacteria were inoculated, the bacterial counts decreased over time. However, this is the first report that the addition of bovine urine to bedding promoted replication of E. coli O157:H7. This finding may account for our ability to culture E. coli O157:H7 from the environment of steers that were not shedding detectable numbers of E. coli O157:H7 in their feces.
Understanding the mechanisms by which urine contributes to survival of E. coli O157:H7 in the farm environment may suggest containment strategies to reduce bacterial numbers or provide insight into the epidemiology of this organism. The main available carbon and nitrogen source in bovine urine from cattle fed grass hay would be urea. Urea can be hydrolyzed to ammonia and carbon dioxide by urease, a nickel-containing metalloenzyme. E. coli O157:H7 contains the ure operon encoding urease, although urease activity, as our results showed, is usually undetectable on conventional media. Recently, Nakano et al. (21) reported that strains do not express urease activity, due to an amber stop codon (UAG) that prematurely terminates the UreD protein at 245 amino acids rather than at the full-length 274 amino acids. It is possible that E. coli O157:H7 expresses urease activity in urine-soaked bedding if readthrough of the amber codon is occurring. Likewise, its growth in 0.2% urea suggests expression of urease activity. Alternatively, E. coli O157:H7 may be using something other than urea in urine or urine-soaked bedding as a substrate. For example, many uropathogenic E. coli strains are able to metabolize D-serine in urine (25); its presence and capability in E. coli O157:H7 could be tested in future work. Also, E. coli O157:H7 growth at some temperatures was enhanced only with dilute urine and not with nondilute urine which, although not tested in this study, may implicate rain as a factor that promotes E. coli O157:H7 replication in the environment.
In conclusion, water, feed, and bedding from the environments of animals shedding E. coli O157:H7 can be a source of exposure to persons attending or participating in animal exhibits that involve ruminants, most commonly, state and county agricultural fairs. This is true even when animals are not shedding E. coli O157:H7 at detectable levels in their feces. The presence of urine-soaked bedding in a ruminant stall or dilution of that urine with rainwater may provide a growth medium for E. coli O157:H7. Because eliminating urine-soaked bedding from the environment is not feasible, future research into the role of bedding, as well as other components of the ruminant's environment in disease transmission, should include an examination of the affects of the presence of urine.
We thank Hannah Knecht, Carl Hunt, Lonie Austin, and Paula Austin for technical expertise and assistance with handling the cattle.
Present address: Department of Veterinary Microbiology and Pathology, Washington State University, Pullman, WA 99164-7040. ![]()
Present address: Department of Plant Pathology, University of Wisconsin, Madison, WI 53706. ![]()
Present address: Department of Anesthesiology, University of Arizona, Tucson, AZ 85721. ![]()
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