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Applied and Environmental Microbiology, December 2005, p. 8383-8389, Vol. 71, No. 12
0099-2240/05/$08.00+0 doi:10.1128/AEM.71.12.8383-8389.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
In Vitro Determination of Prebiotic Properties of Oligosaccharides Derived from an Orange Juice Manufacturing By-Product Stream
K. Manderson,1
M. Pinart,1
K. M. Tuohy,1
W. E. Grace,1
A. T. Hotchkiss,2
W. Widmer,3
M. P. Yadhav,2
G. R. Gibson,1 and
R. A. Rastall1*
School of Food Biosciences, The University of Reading, P.O. Box 226, Whiteknights, Reading RG6 6AP, United Kingdom,1
Eastern Regional Research Center, Agricultural Research Service, U.S. Department of Agriculture, Wyndmoor, Pennsylvania 19038,2
Citrus and Subtropical Products Laboratory, Agricultural Research Service, U.S. Department of Agriculture, 600 Avenue S, NW, Winter Haven, Florida 338813
Received 19 April 2005/
Accepted 27 August 2005

ABSTRACT
Fermentation properties of oligosaccharides derived from orange
peel pectin were assessed in mixed fecal bacterial culture.
The orange peel oligosaccharide fraction contained glucose in
addition to rhamnogalacturonan and xylogalacturonan pectic oligosaccharides.
Twenty-four-hour, temperature- and pH-controlled, stirred anaerobic
fecal batch cultures were used to determine the effects that
oligosaccharides derived from orange products had on the composition
of the fecal microbiota. The effects were measured through fluorescent
in situ hybridization to determine changes in bacterial populations,
fermentation end products were analyzed by high-performance
liquid chromatography to assess short-chain fatty acid concentrations,
and subsequently, a prebiotic index (PI) was determined. Pectic
oligosaccharides (POS) were able to increase the bifidobacterial
and
Eubacterium rectale numbers, albeit resulting in a lower
prebiotic index than that from fructo-oligosaccharide metabolism.
Orange albedo maintained the growth of most bacterial populations
and gave a PI similar to that of soluble starch. Fermentation
of POS resulted in an increase in the
Eubacterium rectale numbers
and concomitantly increased butyrate production. In conclusion,
this study has shown that POS can have a beneficial effect on
the fecal microflora; however, a classical prebiotic effect
was not found. An increase in the
Eubacterium rectale population
was found, and butyrate levels increased, which is of potential
benefit to the host.

INTRODUCTION
The concept of modulating gut health through diet is not new
and dates back to at least the beginning of the 20th century.
However, it is only recently that sound scientific rationales
have been proposed and investigated. Three microflora modulation
tools have emerged (
40): the addition of exogenous living microorganisms
to foods (i.e., probiotics), the selective stimulation of the
growth and activity of beneficial microorganisms indigenous
to the gut (i.e., prebiotics), and a combination of both approaches
(i.e., synbiotics). All three approaches attempt to increase
the numbers of bacteria seen as positive for human gastrointestinal
health, usually the lactobacilli and bifidobacteria. Prebiotics
have been defined as "non-digestible food ingredients that selectively
stimulate a limited number of bacteria in the colon, to improve
host health" (
12). Bifidobacteria and lactobacilli are known
to directly inhibit the growth of pathogenic bacteria, such
as certain species of clostridia (e.g.,
Clostridium difficile and
C. perfringens) and pathogenic
Enterobacteriaceae, through
the production of short-chain fatty acids, lowering of colonic
pH, production of antimicrobial compounds, and/or competition
for growth substrates and adhesion sites (
13,
23,
27). The bifidogenic
nature of a range of prebiotics has now been confirmed in vivo
in human feeding studies (
11,
37). These prebiotics include
inulin, fructo-oligosaccharides (FOS), galacto-oligosaccharides,
and lactulose (
42,
43,
25,
44).
The aim of the present work was to assess the prebiotic properties of oligosaccharides extracted from the peel by-product of orange juice manufacturing. Citrus residue remaining after juice extraction represents approximately half of the fruit wet mass, and approximately half of this residue is peel (2). More than 2,000,000 tons of citrus pulp pellets are produced annually for cattle feed from citrus processing residue, which is a low-valued product. Pectin, a higher-valued product, is manufactured from citrus peel, but the market demand for pectin is low compared to the potential pectin that could be manufactured from the worldwide supply of citrus-processing residue.
Pectic oligosaccharides (POS) were manufactured from commercial pectin in an enzyme membrane reactor (30) and then evaluated for their prebiotic properties (29). These pectic oligosaccharides had a low prebiotic potential compared to FOS, although they were more selectively fermented than were the parent pectins (29). Pectic oligosaccharides also protected colonocytes against Escherichia coli verocytotoxins (32) and stimulated apoptosis in human colonic adenocarcinoma cells (31).
Here, we aimed to find a more cost-effective way to produce prebiotic pectic oligosaccharides directly from orange peel albedo (OA). Fructo-oligosaccharides, the most extensively studied prebiotics and the current market leader, were chosen as a positive control for in vitro fecal fermentation studies, while starch, a nonprebiotic carbohydrate, was used as a nonselective control.

MATERIALS AND METHODS
To determine the selectivity of fermentation of the test material
in comparison to that of FOS and starch, pH-controlled, stirred
batch cultures inoculated with human fecal slurries were used.
The bacteriology was carried out using fluorescent in situ hybridization
with oligonucleotide probes targeting specific 16S rRNA regions
of the microorganisms tested. Short-chain fatty acids (SCFA),
as major end products of bacterial fermentation, were analyzed
by high-performance liquid chromatography (HPLC).
Materials.
All chemicals were purchased from BDH (Poole, Dorset, United Kingdom), except for MgSO4 · 7H2O and L-cysteine HCl, which were obtained from Sigma (Poole, Dorset, United Kingdom). Fructo-oligosaccharides (Raftilose P95) were obtained from Orafti (Tienen, Belgium), and starch was from Sigma (Poole, Dorset, United Kingdom). Fresh shaved Hamlin orange albedo (white part of orange peel) was obtained from a Florida commercial citrus juice processor and frozen immediately to 20°C until used.
Extraction of pectic oligosaccharides.
Orange albedo was used to extract pectic oligosaccharides. POS were subsequently treated by nanofiltration to remove excess nitrates (14). Orange albedo was mixed with an equal weight of deionized water and then wet milled using a Comitrol model 1700 food processor (Urschel Laboratories, Valparaiso, IN) to a fine paste with an average particle size distribution of less than 0.5 mm. The ground albedo slurry (9 kg) containing 4.5 kg albedo was added to a tank containing 57 liters aqueous HNO3 (pH 1.5) to give a concentration of 1 g peel/12.5 ml HNO3, and the was pH adjusted back to 1.5 with concentrated HNO3. The tank was then agitated for 30 min, and the slurry was pumped into a pasteurizer (MicroThermics HTSL Lab-25, Raleigh, NC) configured with 7.75-mm-inner-diameter tubing in the heat exchangers (400-ml volume heating, 400-ml hold, 400-ml volume cooling). The pasteurizer was adjusted to a heating temperature of 120°C, a back pressure of 310 to 380 kPa (to prevent boiling), and a flow rate of 1,200 ml/min with water prior to pumping the slurry. After switching to the slurry, the steam input temperature had to be increased slightly to give a slurry temperature of 120°C. As set up, the slurry was thus heated to 120°C within 20 s, held at the temperature for 20 s, and then cooled to 14°C within 20 s. Temperature drop in the hold tube assembly was less than 4°C.
The slurry was then pumped through a Pony turbo finisher (Mecat USA, Orlando, FL), a mechanical continuous filtration unit with a 53-µm mesh screen, whereby the insoluble peel residue was separated from the extraction medium. The insoluble peel residue was rinsed using 1 volume of water and agitation for 30 min. The rinse was passed again through the turbo finisher, where the liquid was collected and the insoluble residue was discarded. Isopropyl alcohol (IPA) was then added to the liquid extract to bring the concentration up to 70% IPA, and the solution was stored for 12 h at 5°C to precipitate the pectin. This solution was then pumped through the turbo filter to separate the precipitate, and the alcohol-insoluble precipitate was washed twice more with 2 parts per unit weight of 70% IPA and once with 100% IPA. The alcohol-insoluble fraction was then dried in a vacuum oven.
The alcohol-soluble supernatant was neutralized with NaOH to a pH between 6.5 and 7.5, and the IPA was evaporated off at 35°C under reduced pressure using a Buchi (Brinkman, Westbury, NY) 20-liter rotary evaporator. The aqueous supernatant was centrifuged at 9,639 x g to remove a cloudy precipitate that had formed upon adjustment of the pH. The supernatant was poured into a C18 solid-phase extraction column (Altex, Harbor City, CA) to separate the polar from the nonpolar fractions. The polar fraction containing POS was lyophilized, and the nonpolar fraction was eluted with ethanol.
Nanofiltration of pectic oligosaccharides.
To desalt the polar fraction, continuous diafiltration was performed using 1,000-molecular-weight-cutoff DS-5-DL membranes (Osmonics Desal). The polar fraction (60 g) was dissolved in H2O (2 liters) to give a total sugar content of 3%. This solution was circulated in the filtration system for 10 min before the initial feed concentrations were measured. Two parallel high-pressure filtration cells were used, with a total membrane area of 81 cm2. The inlet flow of water into the feed tank was matched to that of the permeate flow rate such that the volumes remained constant. The pressure and temperature were set at 20 x 106 Pa and 60°C, respectively. Permeate flux measurements and retentate and permeate samples were taken every 2 h. The experiment was finished after 6 liters of cumulative permeate was obtained. The retentate containing the orange peel POS was lyophilized. Before and after nanofiltration, the nitrate content of samples was determined by ion chromatography using a Dionex AS14A column, an AG14A guard column, and a 3.5 mM Na2CO3-1.0 mM NaHCO3 eluent at a 1.2 ml/min flow rate.
High-performance anion-exchange chromatography (HPAEC).
Orange peel POS were separated over a 100-min 25 to 500 mM nonlinear potassium oxalate, pH 6, gradient using a CarboPac PA1 column (4 by 250 mm; Dionex Corp.) and a CarboPac PA guard column on a Dionex 4500i system (18, 19). Polygalacturonic acid was hydrolyzed in an autoclave for 40 min at 125°C in a nitric acid solution. Oligosaccharide standards were isolated by preparative HPLC (17, 20, 21) or obtained from Sigma.
Carbohydrate assays.
The total carbohydrate content of POS was determined by the phenolsulfuric acid method (6). The galacturonic acid content was determined by a colorimetric method (8), with some modifications (48). Starch analysis was performed using the Megazyme (Bray, Ireland) total starch analysis kit. This kit utilizes thermostable
-amylase and amyloglucosidase for starch hydrolysis and glucose oxidase/peroxidase for glucose detection.
Monosaccharide analysis.
Methanolysis of POS was performed by adding 100 µl methyl acetate and 400 µl 1.5 M HCl in methanol to up to 1-mg samples (dried in 50°C vacuum oven) and heating them at 85°C for 17 h. After the samples had cooled to room temperature, 5 drops of n-butanol was added and the samples were evaporated to dryness under a stream of nitrogen. In order to hydrolyze methyl glycosides formed by methanolysis, 0.5 ml of 2 M trifluoroacetic acid was added, and the samples were heated at 121°C for 1 h. The samples were cooled to room temperature and evaporated to dryness, and 0.5 ml of methanol was added and evaporated to dryness three times. Water was added to each sample, and they were filtered (0.25 µm) prior to injection. Inositol was added to each sample prior to methanolysis as an internal standard.
Hydrolysates were analyzed for neutral monosaccharide content by HPAEC-pulsed amperometric detection (PAD) using a Dionex ICS-2500 system that included a CarboPac PA20 column and guard column, an EG 50 eluent generator that produced the isocratic 10 mM KOH mobile phase, a continuously regenerated anion trap column, a GP 50 pump operated at 0.5 ml/min, an ED50 electrochemical detector utilizing the quadruple potential waveform, and an AS50 autosampler with a thermal compartment (30°C column heater). The acidic monosaccharide content was determined with a Dionex DX-500 system, which included a GP50 gradient pump (0.5 ml/min), a CarboPac PA20 column and guard column, an ED40 electrochemical detector (gold working electrode and pH reference electrode), an LC25 chromatography oven (30°C), a PC10 pneumatic controller (postcolumn addition of 500 mM NaOH), and an AS3500 autosampler. The mobile phase consisted of isocratic 10 mM CH3COONa, 1 mM NaOH eluant for 10 min, and then a linear gradient of 100 to 130 mM CH3COONa in 100 mM NaOH for the following 20 min.
Fecal batch culture fermentation.
Four 280-ml glass fermentor vessels were filled with 180 ml of a prereduced sterile medium containing 2 g/liter peptone water, 2 g/liter yeast extract, 0.1 g/liter NaCl, 0.04 g/liter K2HPO4, 0.04 g/liter KH2PO4, 0.01 g/liter MgSO4 · 7H2O, 0.01 g/liter CaCl2 · 2H2O, 2 g/liter NaHCO3, 0.5 g/liter L-cysteine HCl, 0.5 g/liter bile salts, 4 ml resazurin at 0.05 g/liter, 10 µl vitamin K1, 2 ml Tween 80, and 10 ml hemin. The medium was adjusted to pH 7.0 and continuously sparged with oxygen-free nitrogen (15 ml/min). A 10% (wt/vol) fecal slurry from three healthy donors was prepared using prereduced 0.1 M phosphate-buffered saline (pH 7.0) and then mixed in a stomacher (model 6041; Seward Scientific, United Kingdom) for 120 s. Each vessel was inoculated with 20 ml of the slurry and 2 g of carbohydrate (POS, fructo-oligosaccharides, orange albedo, or starch). Fecal samples were obtained from one male and two female volunteers with a mean age of 24 years who had not taken antibiotics for at least 6 months prior to providing the sample and who had no history of a gastrointestinal disorder. Fermentors were maintained at 37°C, and duplicate samples were removed after 0, 5, 10, and 24 h for the enumeration of bacteria and SCFA analyses (46, 29). Fermentations were run on three separate occasions with a different donor.
Fluorescent in situ hybridization.
Changes in human fecal bacterial populations were assessed by fluorescent in situ hybridization with 16S rRNA probes. These 16S rRNA probes, specific for predominant classes of the gut microflora (bacteroides, bifidobacteria, Clostridium histolyticum, Eubacterium rectale, and lactobacilli/enterococci), were manufactured and tagged with fluorescent markers. The probes used were Bif164 (26), Bac303 (28), Erec482 (10), His150 (10), and Lab158 (16). The nucleic acid stain 4'6-diamidino-2-phenylindole (DAPI) was used for total bacterial counts. Fermentation samples were diluted and fixed overnight in 4% paraformaldehyde at 4°C in a 1:3 ratio of sample to 4% paraformaldehyde (vol/vol). These cells were then washed with phosphate-buffered saline (0.1 M, pH 7.0), resuspended in 150 µl phosphate-buffered saline plus 150 µl ethanol, and stored at 20°C for a minimum of 1 h. The cell suspension was then added to the hybridization mixture comprised of 4.78 g/liter Tris-HCl (30 mM), 79.69 g/liter NaCl (1.36 M), 15 ml 10% sodium dodecyl sulfate solution (pH 7.2), and 4 M HCl at 15 ml and filtered through a 0.2-µm filter (Millipore, Watford, United Kingdom). Hybridization was carried out at appropriate temperatures for the probes. Subsequently, the hybridization mix was vacuum filtered (Millipore, Watford, United Kingdom), and the filter was mounted on a microscope slide and examined using fluorescence microscopy such that the bacterial groups could be enumerated (36).
Short-chain fatty acid analysis.
One-millilliter samples were removed from the batch culture fermentors and centrifuged at 13,000 x g for 5 min, and 20 µl was injected onto an HPLC system (LaChrom L7100; Merck, Poole, United Kingdom) equipped with a refractive index detector and an automatic injector. The column used was an ion-exclusion Aminex HPX-87H column (7.8 by 300 mm; Bio-Rad, Watford, United Kingdom) maintained at 50°C. The eluent was 0.005 mM H2SO4 at a flow rate of 0.6 ml/min. Data were acquired using JCL6000 software (Jones Chromatography, Wales, United Kingdom). Quantification of the samples was carried out using calibration curves of acetic, propionic, butyric, and lactic acids in concentrations between 0.5 and 100 mM, and results were expressed in mmol/liter (36). The experiments were repeated in triplicate.
Statistical analysis.
Where differences in the treatments were found, a two-sample Student's t test was carried out between the samples. The differences were considered significant when P was <0.05.

RESULTS
POS extraction.
The pasteurizer extraction of POS from Hamlin orange peel produced
158.5 g of the polar supernatant fraction from 4.542 kg wet
peel (976.5 g, dry weight), which was a 16% yield. In order
to further purify the polar supernatant fraction and remove
salts that could interfere with batch fecal cultures, nanofiltration
was performed. Nanofiltration significantly reduced (by five
times) the nitrate content to minimal levels and reduced the
fraction weight by 50%. Therefore, the final yield of POS from
Hamlin orange peel was 8%. An equivalent yield of high-quality
pectin was produced (data not shown).
POS composition.
Orange peel POS consisted of a series of oligosaccharides (Fig. 1). The POS chromatogram was very similar to the chromatogram for the polar supernatant fraction published previously (see Fig. 2D in reference 21), demonstrating that nanofiltration did not alter the POS oligosaccharide profile. The POS oligosaccharide retention times did not exactly match those of oligogalacturonic acids (Fig. 1), suggesting that POS had a rhamnogalacturonan structure. When POS was saponified with KOH (pH 11, 30 min) and then neutralized with HCl, the retention times and peak heights of some peaks in Fig. 1 shifted, and a series of minor peaks between 25 and 55 min were observed (data not shown). Retention times of the new peaks that appeared following saponification also did not agree with oligogalacturonic acid retention times. This suggests that some of the galacturonic acid residues in POS were modified, possibly with methyl esters. The exact POS degree of polymerization is unknown. However, since oligosaccharide chain length generally increases with increasing HPAEC-PAD retention times, the orange peel POS chain length range (Fig. 1) was greater than the chain length range of POS I and POS II (22) produced by enzymatic hydrolysis from high-methoxy citrus pectin and low-methoxy apple pectin, respectively (30).
The monosaccharide composition of POS consisted mainly of glucose
and arabinose, with lesser amounts of galactose, galacturonic
acid, xylose, rhamnose, and fucose (Table
1). POS had a 13.0%
(±1.1%) galacturonic acid content and a 56.6% (±1.4%)
total carbohydrate content (glucose standard) as determined
by the colorimetric assays. The high concentration of glucose
present in the POS hydrolysate was due to free glucose in the
POS fraction. The glucose content of POS was 18% with and without

-amylase and amyloglucosidase treatment in the starch assay.
The presence of free glucose in the unhydrolyzed POS fraction
was confirmed by HPAEC-PAD using the CarboPac PA20 column. Free
glucose was also detected in the orange albedo (7%) used in
this study. The remaining monosaccharide composition was consistent
with a rhamnogalacturonan structure containing a 3:1 galacturonic
acid/rhamnose ratio. Because this ratio was not 1:1, the POS
are probably a combination of rhamnogalacturonan and xylogalacturonan
in nature (
35,
45). Some of the peaks in Fig.
1 may represent
arabinan or arabinogalactan oligosaccharides, which are typical
rhamnogalacturonan side chains. It is also possible that small
amounts of xyloglucan oligosaccharides could be present based
on the POS monosaccharide composition. However, based on how
POS was extracted and the fact that there is no evidence for
cello-oligosaccharides present in HPAEC-PAD chromatograms, xyloglucan
oligosaccharides are probably only minor constituents, if present
at all. Further analysis will be performed and subsequently
reported to determine the exact POS structure.
Fermentation studies.
Changes in human fecal bacterial populations present in the
batch cultures are summarized in Table
2. Both POS and FOS produced
a significant increase in bifidobacteria after 24 h of fermentation
with POS and after 5 and 10 h with FOS. The bacteroides population
remained stable for three of the four samples tested, with the
exception of starch, where a significant increase was found
after 5 h of fermentation. Similarly,
Clostridium histolyticum levels were maintained with a reduction in numbers after 24
h of fermentation with FOS. Significant increases were seen
in
Eubacterium rectale numbers with POS and FOS, and nonsignificant
increases were determined with orange albedo and starch. A rise
in lactobacilli/enterococci was also seen, but again, this increase
was not significant.
Concentrations of lactic, acetic, and propionic acids were higher
at all time points tested with POS as a carbohydrate source
(Table
3). POS gave the highest total SCFA of all carbohydrates
tested at 24 h. Butyrate production, however, increased after
10 h and peaked at 24 h, coinciding with the highest
Eubacterium rectale numbers. FOS resulted in significantly increased concentrations
of acetic, propionic, and butyric acids after 10 h and lactic
acid after 24 h. Fermentation of orange albedo produced increased
lactic, acetic, and propionic acids at 5 h, and butyrate concentrations
peaked at 10 h and remained elevated up to 24 h, again correlating
with
Eubacterium rectale numbers. After 24 h of fermentation
with starch, a significant increase in propionic acid was seen.
After 10 h, butyric acid concentrations increased and remained
at a high level until 24 h.
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TABLE 3. Concentrations of organic acids produced during fermentation of each carbohydrate source at 0, 5, 10, and 24 h at pH 6.8 anaerobic conditions and 37°Ca
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Prebiotic index (PI).
A quantitative equation used to help with the analysis of prebiotic
fermentation (
33) for POS displayed a trend similar to that
found in previous research (
29), increasing with time (Table
4), as follows:
FOS displayed a similar trend but achieved higher values. OA
displayed an initially high PI score, but this decreased with
time. The PI for starch was found to decrease after 10 h, possibly
due to increased levels of bacteroides and clostridia at this
time.

DISCUSSION
Batch culture experiments were carried out with POS and OA,
which are by-product streams of orange juice manufacturing,
and compared for their prebiotic potential against FOS and starch
as control substrates. While the orange peel POS and OA contained
free glucose, this carbohydrate is not known to have prebiotic
properties. Therefore, the POS derived from orange peel were
responsible for the elevated PI values. Previously, enzymatically
generated POS have been reported to have potential as prebiotic
substrates (
29), with elevated PI relative to those of their
parent pectins. The selectivity was not, however, as marked
as that seen with FOS, probably due to the maintenance of bacteroides
and clostridium populations throughout the fermentation. Pectin
substrates have been shown to maintain the levels of all bacteria
in previous fermentation experiments (
7). Due to variation in
fecal donors, the PI values obtained for enzymatically generated
POS (
29) and the POS PI values obtained here cannot be compared
directly. However, it is likely that the orange peel POS PI
would continue to increase after 24 h, as was observed for enzymatically
generated POS (
29). Orange peel POS also increased the bifidobacterial
population later in the fermentation than did FOS, suggesting
that the orange peel POS produced a more sustained prebiotic
fermentation. A blend of POS and FOS might result in elevated
bifidobacterial numbers for a prolonged period of time (
9).
The use of a tubular heat exchanger for the continuous extraction of sugar beet pectin was reported previously (47). This is the first report of methods to produce both pectin and POS from orange peel. While the yield of POS was 8%, our preliminary estimate is that it would not be more expensive to produce commercially than pectin. POS is a significant component of the supernatant remaining after pectin precipitation. This supernatant is a waste material with a high biological oxygen demand that is very expensive to dispose of during pectin manufacturing. Therefore, POS is potentially a coproduct that could lower the cost of pectin manufacturing.
Eubacterium rectale numbers significantly increased with the oligosaccharides tested. Dietary fiber in the form of fruit pectin has previously been shown to increase eubacterial numbers (7, 38). In addition, pectins with different degrees of esterification result in differing butyrate concentrations (5). This physiologically important group of bacteria is known to produce relatively large amounts of butyrate (38, 1, 24). Butyrate production is believed to be beneficial to health (4), with touted roles in the prevention of ulcerative colitis (3, 39, 41) and colon cancer (15, 34).
In conclusion, we have shown that POS can be used effectively as a prebiotic because of the increase in bifidobacteria and Eubacterium rectale numbers with the subsequent increase in butyrate concentrations, giving an added possible health benefit.

ACKNOWLEDGMENTS
We thank André White for the galacturonic acid and total
carbohydrate colorimetric analysis and Michael Kurantz for the
starch analysis.

FOOTNOTES
* Corresponding author. Mailing address: School of Food Biosciences, The University of Reading, P.O. Box 226, Whiteknights, Reading RG6 6AP, United Kingdom. Phone: 44 (0) 118 3786726. Fax: 44 (0) 118 9310080. E-mail:
r.a.rastall{at}rdg.ac.uk.


REFERENCES
1 - Barcenilla, A., S. E. Pryde, J. C. Martin, S. H. Duncan, C. S. Stewart, C. Henderson, and H. J. Flint. 2000. Phylogenetic relationships of butyrate-producing bacteria from the human gut. Appl. Environ. Microbiol. 66:1654-1661.[Abstract/Free Full Text]
2 - Braddock, R. J. 1999. Handbook of citrus by-products and processing technology. John Wiley & Sons, Inc., New York, N.Y.
3 - Burke, A., G. R. Lichtenstein, and J. L. Rombeau. 1997. Nutrition and ulcerative colitis. Baillieres Clin. Gastroenterol. 11:153-174.[CrossRef][Medline]
4 - Cuff, M. A., and S. P. Shiraz-Beechey. 2004. The importance of butyrate transport to the regulation of gene expression in the colonic epithelium. Biochem. Soc. Trans. 32:1100-1102.[CrossRef][Medline]
5 - Dongowski, G., A. Lorenz, and H. Anger. 2000. Degradation of pectins with different degrees of esterification by Bacteroides thetaiotaomicron isolated from human gut flora. Appl. Environ. Microbiol. 66:1321-1327.[Abstract/Free Full Text]
6 - DuBois, M., K. A. Gilles, J. K. Hamilton, P. A. Rebers, and F. Smith. 1956. Colorimetric method for determination of sugars and related substances. Anal. Chem. 28:350-356.[CrossRef]
7 - Duncan, S. H., K. P. Scott, A. G. Ramsay, H. J. M. Harmsen, G. W. Welling, C. S. Stewart, and J. H. Flint. 2003. Effects of alternative dietary substrates on competition between human colonic bacteria in an anaerobic fermentor system. Appl. Environ. Microbiol. 69:1136-1142.[Abstract/Free Full Text]
8 - Filisetti-Cozzi, T. M., and C. C. N. C. Carpita. 1991. Measurement of uronic acids without interference from neutral sugars. Anal. Biochem. 197:157-162.[CrossRef][Medline]
9 - Fooks, L. J., and G. R. Gibson. 2002. In vitro investigations of the effect of probiotics and prebiotics on selected human intestinal pathogens. FEMS Microbiol. Ecol. 39:67-75.
10 - Franks, A. H., H. J. M. Harmsen, G. C. Raangs, G. J. Jansen, F. Schut, and G. W. Welling. 1998. Variations of bacterial populations in human faeces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes. Appl. Environ. Microbiol. 64:3336-3345.[Abstract/Free Full Text]
11 - Gibson, G. R., P. Berry-Ottaway, and R. A. Rastall. 2000. Prebiotics: new developments in functional foods. Chandos Publishing Limited, Oxford, United Kingdom.
12 - Gibson, G. R., and M. B. Roberfroid. 1995. Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J. Nutr. 125:1401-1412.
13 - Gibson, G. R., and X. Wang. 1994. Regulatory effects of bifidobacteria on the growth of other colonic bacteria. J. Appl. Bacteriol. 77:412-420.[Medline]
14 - Goulas, A. K., P. G. Kapasakalidis, H. R. Sinclair, R. A. Rastall, and A. S. Grandison. 2002. Purification of oligosaccharides by nanofiltration. J. Membr. Sci. 209:321-335.[CrossRef]
15 - Hague, A., D. J. E. Elder, D. J. Hicks, and C. Paraskeva. 1995. Apoptosis in colorectal tumour cells: induction by the short chain fatty acids butyrate, propionate and acetate and by the bile salt deoxycholate. Int. J. Cancer 60:400-406.[Medline]
16 - Harmsen, H. J. M., A. C. M. Wildebroer-Veloo, J. Grijpstra, J. Knol, J. E. Degener, and G. W. Welling. 2000. Development of 16S rRNA-based probes for the Coriobacterium group and the Atopobium cluster and their application for enumeration of Coriobacteriaceae in human feces from volunteers of different age groups. Appl. Environ. Microbiol. 66:4523-4527.[Abstract/Free Full Text]
17 - Hicks, K. B., A. T. Hotchkiss, Jr., K. Sasaki, P. L. Irwin, L. W. Doner, G. Nagahashi, and R. M. Haines. 1994. Analytical and preparative HPLC of carbohydrates: inositols and oligosaccharides derived from cellulose and pectin. Carbohydr. Polymers 25:305-313.[CrossRef]
18 - Hotchkiss, A. T., Jr., and K. B. Hicks. 1990. Analysis of underivatized oligogalacturonic acids with 50 or fewer residues by high performance anion exchange chromatography and pulsed amperometric detection. Anal. Biochem. 184:200-206.[CrossRef][Medline]
19 - Hotchkiss, A. T., Jr., K. El-Bahtimy, and M. Fishman. 1996. Analysis of pectin structure by HPAEC-PAD, p. 129-146. In H.-F. Linskens and J. F. Jackson (ed.), Plant cell wall analysis. Modern methods of plant analysis, vol. 17. Springer-Verlag, Berlin, Germany.
20 - Hotchkiss, A. T., Jr., K. B. Hicks, L. W. Doner, and P. L. Irwin. 1991. Isolation of oligogalacturonic acids in gram quantities by preparative HPLC. Carbohydr. Res. 215:81-90.[CrossRef]
21 - Hotchkiss, A. T., Jr., R. M. Haines, and K. B. Hicks. 1993. Improved gram quantity isolation of malto-oligosaccharides by preparative HPLC. Carbohydr. Res. 242:1-9.[CrossRef]
22 - Hotchkiss, A. T., Jr., E. Olano-Martin, W. E. Grace, G. R. Gibson, and R. A. Rastall. 2003. Pectic oligosaccharides as prebiotics. ACS Symp. Ser. 849:54-62.
23 - Hudault, S. V. Liévin, M.-F. Bernet-Camard, and A. L. Servin. 1997. Antagonistic activity exerted in vitro and in vivo by Lactobacillus casei (strain GG) against Salmonella typhimurium C5 infection. Appl. Environ. Microbiol. 63:513-518.[Abstract]
24 - Kleesen, B., L. Hartmann, and M. Blaut. 2001. Oligofructose and long-chain inulin: influence on the gut microbial ecology of rats associated with a human faecal flora. Br. J. Nutr. 86:291-300.[Medline]
25 - Kolida, S. K. Tuohy, and G. R. Gibson. 2007. Prebiotic effects of inulin and oligofructose. Br. J. Nutr. 87:S193-S197.
26 - Langendijk, P. S., F. Schut, G. J. Jansen, G. W. Raangs, G. R. Kamphuis, M. H. F. Wilkinson, and G. W. Welling. 1995. Quantitative fluorescent in situ hybridization of Bifidobacterium spp. with genus-specific 16S rRNA-targeted probes and its application in fecal samples. Appl. Environ. Microbiol. 61:3069-3075.[Abstract]
27 - Lievin, V., L. Pfeiffer, S. Hudault, F. Rochat, D. Brassart, J.-R. Neeser, and A. L. Servin. 2000. Bifidobacterium strains from resident infant human gastrointestinal microbiota exert antimicrobial activity. Gut 47:646-652.[Abstract/Free Full Text]
28 - Manz, W., R. Amann, W. Ludwig, M. Vancanneyt and K.-H. Schleifer. 1996. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment. Microbiology 93:505-5111.
29 - Olano-Martin, E., G. R. Gibson, and R. A. Rastall. 2002. Comparison of the in vitro bifidogenic properties of pectins and pectic-oligosaccharides. J. Appl. Microbiol. 93:505-511.[CrossRef][Medline]
30 - Olano-Martin, E., K. C. Mountzouris, G. R. Gibson, and R. A. Rastall. 2001. Continuous production of oligosaccharides from pectin in an enzyme membrane reactor. J. Food Sci. 66:966-971.[CrossRef]
31 - Olano-Martin, E., G. H. Rimbach, G. R. Gibson, and R. A. Rastall. 2003. Pectin and pectic-oligosaccharides induce apoptosis in in vitro human colonic adenocarcinoma cells. Anticancer Res. 23:341-346.[Medline]
32 - Olano-Martin, E., M. R. Williams, G. R. Gibson, and R. A. Rastall. 2003. Pectins and pectic-oligosaccharides inhibit Escherichia coli O157:H7 Shiga toxin as directed towards the human colonic cell line HT29. FEMS Microbiol. Lett. 218:101-105.[CrossRef][Medline]
33 - Palframan, R., G. R. Gibson, and R. A. Rastall. 2003. Development of a quantitative tool for the comparison of the prebiotic effect of dietary oligosaccharides. Lett. Appl. Microbiol. 37:281-284.[CrossRef][Medline]
34 - Reddy, B. S. 1999. Possible mechanisms by which pro- and prebiotics influence colon carcinogenesis and tumour growth. J. Nutr. 129:1478S-1482S.
35 - Ridley, B. L., M. A. O'Neill, and D. Mohnen. 2001. Pectins: structure, biosynthesis and oligogalacturonide-related signalling. Phytochemistry 57:929-967.[CrossRef][Medline]
36 - Rycroft, C. E., M. R. Jones, G. R. Gibson, and R. A. Rastall. 2001. A comparative in vitro evaluation of the fermentation properties of prebiotic oligosaccharides. J. Appl. Microbiol. 91:878-887.[CrossRef][Medline]
37 - Saavedra, J. M., and A. Tschernia. 2002. Human studies with probiotics and prebiotics: clinical implications. Br. J. Nutr. 87:S241-S246.
38 - Sembries, S., G. Dongowski, G. Jacobasch, K. Mehrlander, F. Will, and H. Dietrich. 2003. Effects of dietary fibre-rich juice colloids from apple pomace extraction juices on intestinal fermentation products and microbiota in rats. Br. J. Nutr. 90:607-615.[CrossRef][Medline]
39 - Simpson, E. J., M. A. S. Chapman, J. Dawson, D. Berry, I. A. Macdonald, and A. Cole. 2000. In vivo measurement of colonic butyrate metabolism in patients with quiescent ulcerative colitis. Gut 46:73-77.[Abstract/Free Full Text]
40 - Steer, T., H. Carpenter, K. Tuohy, and G. R. Gibson. 2000. Perspectives on the role of the human gut microbiota in health and disease and its modulation by pro- and prebiotics. Nutr. Res. Rev. 13:229-254.[CrossRef]
41 - Treem, W. R., N. Ashan, M. Shoup, and J. S. Hyams. 1994. Fecal short-chain fatty-acids in children with inflammatory bowel disease. J. Pediatr. Gastr. Nutr. 18:159-164.[Medline]
42 - Tuohy, K. M., R. K. Finlay, A. G. Wynne, and G. R. Gibson. 2001. A human volunteer study on the prebiotic effects of HP-inulinfaecal bacteria enumerated using fluorescent in situ hybridization (FISH). Anaerobe 7:113-118.
43 - Tuohy, K. M., S. Kolida, A. M. Lustenberger, and G. R. Gibson. 2001. The prebiotic effects of biscuits containing partially hydrolysed guar gum and fructo-oligosaccharidesa human volunteer study. Br. J. Nutr. 86:341-348.[Medline]
44 - Tuohy, K. M., C. Ziemer, A. Klinder, Y. Knobel, B. L. Pool-Zobel, and G. R. Gibson. 2002. A human volunteer study to determine the prebiotic effects of lactulose powder on human colonic microbiota. Microbial Ecol. Health Dis. 14:165-173.[CrossRef]
45 - Vincken, J.-P., H. A. Schols, R. J. F. J. Oomen, M. C. McCaan, P. Ulvskov, A. G. J. Voragen, and R. G. F. Visser. 2003. If homogalacturonan were a side chain of rhamnogalacturonan I. Implications for cell wall architecture. Plant Physiol. 132:1781-1789.[Free Full Text]
46 - Wang, X., and G. R. Gibson. 1993. Effects of the in vitro fermentation of oligofructose and inulin by bacteria growing in the human intestine. J. Appl. Bacteriol. 75:373-380.[Medline]
47 - Weibel, M. K. April 1991. Sugar beet pectins and their use in cosmestibles. U.S. patent 5,008,254.
48 - Yoo, S.-H., M. L. Fishman, B. J. Savary, and A. T. Hotchkiss, Jr. 2003. Monovalent salt-induced gelation of enzymatically deesterified pectin. J. Agric. Food Chem. 51:7410-7417.[CrossRef][Medline]
Applied and Environmental Microbiology, December 2005, p. 8383-8389, Vol. 71, No. 12
0099-2240/05/$08.00+0 doi:10.1128/AEM.71.12.8383-8389.2005
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