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Applied and Environmental Microbiology, July 2005, p. 3761-3769, Vol. 71, No. 7
0099-2240/05/$08.00+0 doi:10.1128/AEM.71.7.3761-3769.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Microbiology and Cell Science, Box 110700, University of Florida, Gainesville, Florida 32611
Received 7 July 2004/ Accepted 9 January 2005
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Genes encoding trehalose biosynthesis are widely distributed in nature (14, 35) and have been extensively studied in E. coli and Saccharomyces spp. In E. coli, the trehalose biosynthetic operon (otsBA) is induced by osmotic shock (16), extreme heat (13), extreme cold (23), desiccation (43), and entry into stationary phase (19). Two enzymes are unique to trehalose biosynthesis: trehalose-6-phosphate synthase, encoded by otsA, and trehalose-6-phosphate phosphatase, encoded by otsB (Fig. 1). Mutations in these genes decreased tolerance to osmotic stress and decreased survival during storage. The trehalose biosynthetic operon (otsBA) from E. coli has been used to genetically engineer increased stress tolerance in plants (15) and in mammalian cells (18, 40). This operon has recently been overexpressed in Corynebacterium glutamicum for the production of extracellular trehalose (33).
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FIG. 1. Trehalose metabolism in E. coli. Glucose is transported into the cell and activated by the phosphoenolpyruvate (PEP)-dependent phosphotransferase system (PTS). The biosynthetic pathway for trehalose is indicated by the thicker arrows (double arrows, synthesis of UDP-glucose; filled arrows, condensation and dephosphorylation). Genes deleted in JP10 and JP20 are shown in black boxes. JP20 also contains a functional, regulated ots operon (lacI-Ptac-otsBA) integrated into the ampH gene. Trehalose is degraded by both periplasmic (TreA [4]) and cytoplasmic (TreF [21]) enzymes. Trehalose biosynthesis is also controlled by the synthesis of TreC, which dephosphorylates trehalose-6-phosphate (36). Stretch-activated proteins (SAP) in the plasma membrane facilitate the exit of trehalose under hypotonic conditions (37).
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TABLE 1. Sources and characteristics of strains and plasmids
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otsBA::FRT
treA::FRT
treC::FRT
treF::FRT). At each step, the strains were tested for appropriate antibiotic resistance. Mutations were verified by analysis of the PCR products.
Construction of JP20, JP21, JP22, JP23, and JP24.
A conjugative transposon vector (pLOI3650) was constructed to integrate a 6.1-kb fragment containing a regulated ots operon (lacI-Ptac-otsBA-FRT-kan-FRT) into JP15. This construct was based on the
pir-dependent transposase vector designed by de Lorenzo et al. (12). The kanamycin gene in the mini Tn5 Km2 plasmid was replaced with a PacI linker by digestion with SfiI and Klenow treatment prior to ligation. The NotI site was eliminated (NotI, Klenow treatment, and self-ligation) to produce pLOI3469 (Fig. 2). The kan gene was also inactivated in pLOI3601 containing otsBA (StyI, Klenow treatment, and self-ligation) to produce pLOI3604. A SmaI fragment from pLOI2511 containing the FRT-flanked kan gene was ligated into the unique NruI site downstream from the coding region of otsBA in pLOI3604 to produce pLOI3605 (Fig. 2). The EcoRI fragment from pLOI3605 containing the promoterless otsBA operon and the kan gene was excised and ligated into the EcoRI site of pFLAG-CTC, immediately downstream from a tac promoter and lacI (pLOI3607). The SmaI-PsiI fragment from pLOI3607 was then ligated into the blunted PacI site of pLOI3469 to produce pLOI3650. The lacI-regulated otsBA cassette from pLOI3650 was integrated into the chromosome of JP15 by conjugation, using S17-1 as the donor. Integration was confirmed with exconjugants selected for kanamycin and tetracycline resistance (ampicillin sensitive) and by analysis of PCR products. Resistance genes used for construction were removed using FLP recombinase, resulting in trehalose-positive strains (JP20, JP21, JP22, JP23, and JP24) that are isogenic with JP10 (JP15 after removal of the tet gene).
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FIG. 2. Diagram summarizing the construction of pLOI3650. This is a conjugative plasmid with a conditional replicon and a Tn5-based transposon for insertion of a regulated ots operon (lacI-Ptac-otsBA-FRT-kan-FRT). The kan gene is bordered by FRT sites that allow removal by FLP recombinase. OE and OI are recognition sites for Tn5 recombinase.
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Measurement of intracellular trehalose.
Sufficient culture volume was harvested (10,000 x g, 25°C) to provide 2.0 mg dry cell weight (1 unit of optical density at 550 nm [OD550 nm] equals 0.33 g liter1 [dry weight] cells). Cells were permeabilized with 50% methanol and extracted for 30 min on ice. The mixture was mixed vigorously and centrifuged at 10,000 x g for 1 min. The supernatant was assayed for trehalose by thin-layer chromatography as described previously (46). After being visualized with N-(1-naphthyl)ethylenediamine reagent, relative amounts of trehalose were determined by densitometry using Quantity One software (Bio-Rad). For estimates of intracellular trehalose concentrations, a volume of 2 ml per gram of dry cells was assumed.
Tolerance assays.
Tolerance was evaluated by measuring growth (defined as final cell mass after 24 h) in M9 minimal medium containing 2% glucose (M9-2% glucose). The MIC was defined as the concentration (interpolated) at which growth was restricted to less than two doublings (fourfold increase in OD) in 24 h. For these tests, cells from a fresh plate were resuspended in M9 medium containing 2% glucose and used as the inoculum (initial level of 0.03 OD550 nm). Cultures were incubated in 13- by 100-mm capped tubes (37°C water bath, 50-rpm reciprocating shaker, 24 h). Results are presented as average values with standard errors from three or more experiments or as averages of three replicates from one or two experiments. In some cases, growth was monitored more frequently using shaken flasks (50 ml in 250-ml flasks, 37°C water bath, 120 rpm). All compounds tested were obtained from either the Sigma Chemical Company or Fisher Scientific.
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FIG. 3. Growth of E. coli W3110 strains during osmotic (inorganic salts and sugars), heat, and pH stresses. Strains were grown for 24 h in M9-2% glucose medium containing NaCl (A), KCl (B), KH2PO4 (C), arabinose (D), glucose (E), mannose (F), or xylose (G). Strain JP20, a trehalose-overproducing derivative (JP10 lacI-Ptac-otsBA), was grown under the same conditions with ( ) and without ( ) 0.1 mM IPTG. Strains W3110, JP10, and JP20 were also compared for tolerance to heat (H) and pH (I). Symbols for all panels: , W3110 (wild type); , JP10 (trehalose-negative mutant); , JP20; , JP20 with IPTG.
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TABLE 2. Tolerance of W3110 and derivatives to salts, sugars, and physical stress based on MICs
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TABLE 3. Tolerance of W3110 and derivatives to salts, sugars, and physical stress based on IC50s
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The addition of 100 mM KH2PO4 increased the growth of JP10 and W3110 by 40% after 24 h. No similar increase was observed for NaCl or KCl. The benefit of KH2PO4 appears to result from pH buffering. A similar increase in growth occurred when KH2PO4 was replaced with 100 mM MOPS (morpholinepropanesulfonic acid) (data not shown). Unbuffered cultures that reached final densities of over 1.0 OD550 nm all had a pH of approximately 4.6, consistent with growth being limited by pH under our test conditions.
Construction and characterization of JP10 derivatives containing Ptac-otsBA.
Several plasmids were initially constructed for the controlled expression of the otsBA operon, but all were unstable during growth in M9-2% glucose medium (data not shown). To eliminate this problem, an otsBA-positive strain was constructed from JP15 (JP10 before the elimination of tet) by transposing a single copy of the lacI-regulated otsBA operon into the chromosome. Five exconjugants were selected and confirmed by analysis of PCR products and antibiotic markers. After removal of the tet and kan genes used for selection, the resulting clones (JP20 to JP24) were isogenic with JP10. Arbitrarily primed PCR was successful for three of these clones. Each was integrated at a different chromosomal site: JP20 (
ampH::lacI-Ptac-otsBA-FRT), JP21(
alsA::lacI-Ptac-otsBA-FRT), and JP22 (
chiA::lacI-Ptac-otsBA-FRT).
Increased trehalose production in lacI-Ptac-otsBA transposants results in increased NaCl tolerance during growth.
All otsBA transposants exhibited similar increases in cell growth after 24 h in M9-2% glucose medium containing NaCl (300, 400, and 500 mM), fivefold that of the parent (JP10) containing otsAB deletions and threefold that of the wild type, W3110 (Fig. 4). The addition of 0.1 mM IPTG (isopropyl-ß-D-thiogalactopyranoside) to these integrants resulted in further increases in cell mass (fivefold that of JP10 and eightfold that of the wild type). One strain, JP20, was selected for the measurement of intracellular trehalose. Trehalose levels in JP20 with 0.1 mM IPTG (361 mM trehalose) and without IPTG (28 mM trehalose) were substantially higher than in W3110 (<1.0 mM) and JP10 (<1.0 mM) during growth in M9-2% glucose medium. The low level of trehalose in uninduced JP20 can be attributed to incomplete repression by lacI in a background devoid of periplasmic and cytoplasmic activities that degrade trehalose (TreA, TreC, and TreF).
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FIG. 4. Growth of inducible otsBA+ transposants under osmotic stress. Five strains containing a regulated ots operon (lacI-Ptac-otsBA) were compared during growth for 24 h in M9-2% glucose medium containing 300, 400, and 500 mM NaCl. Strains were grown in both the presence (+I) and the absence of 0.1 mM IPTG as an inducer.
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FIG. 5. Growth optimization of lacI-Ptac-otsBA expression during osmotic stress. JP20 was grown with various concentrations of IPTG and the following stress agents: (A) 400 mM NaCl, (B) 400 mM KCl, (C) 400 mM KH2PO4, (D) 489 mM added glucose (600 mM total glucose), (E) 400 mM mannose, (F) 140 mM xylose, (G) 200 mM acetate, (H) 350 mM pyruvate, and (I) 700 mM ethanol.
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FIG. 6. Growth of W3110 strains under osmotic stress. W3110 and JP20 were grown in M9-2% glucose medium containing no added chemicals (A), 400 mM NaCl (B), or 600 mM glucose (C). Symbols: , W3110; , JP20; , JP20 with 0.1 mM IPTG.
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Increasing the production of trehalose increased growth.
The effects of increasing trehalose production were also examined during growth at elevated temperatures, at high and low pHs, and in response to osmotic stress with sugars and additional inorganic salts (Fig. 3). At 37°C, cell densities after 24 h in M9-2% glucose were consistently highest for induced JP20 (OD550 nm of 1.40 ± 0.05 [mean ± standard deviation]), followed by uninduced JP20 (OD550 nm of 1.31 ± 0.04) and then by JP10 (OD550 nm of 1.06 ± 0.03; equivalent density for W3110). Densities of JP20 (induced and uninduced) were also higher than those of W3110 during growth in shaken flasks (Fig. 6). This beneficial effect of increased trehalose biosynthesis on growth was observed from 37°C to 41°C but did not alter the maximum temperature (41°C) permitting growth. Trehalose biosynthesis did not alter the pH range permitting growth.
Resistance to growth inhibition by inorganic salts and hexose sugars (Fig. 3; Tables 2 and 3) correlated with the levels of trehalose production (measured in the absence of stress agent): induced JP20 > uninduced JP20 > W3110 parent > JP10 (trehalose negative). Strain JP20 without induction (leaky) was approximately 40% more stress tolerant to salts and hexoses than the trehalose-negative mutant, JP10 (Fig. 3; Tables 2 and 3). Induction of otsBA (JP20) with 0.1 mM IPTG further increased growth with these stress agents by approximately 20%.
Trehalose biosynthesis was less beneficial with pentose sugars than with hexose sugars or inorganic salts (Fig. 3; Tables 2 and 3). A small benefit was observed for otsBA induction with arabinose at concentrations which partially inhibited JP10. Xylose was more than twice as inhibitory as the other sugars on a molar basis. Induction of otsBA was beneficial for growth only over a narrow range of xylose concentrations. Together, these results suggest that elevated levels of pentose sugars inhibit E. coli growth by some mechanism other than osmotic stress.
Effects of increased trehalose production on tolerance to fermentation products.
Increased trehalose biosynthesis was beneficial for growth in the presence of pyruvate (Fig. 7). The concentration of pyruvate required to inhibit growth in JP20 was over twice that for W3110 and JP10. Induction of otsBA with 0.1 mM IPTG (JP20) further increased pyruvate tolerance during growth, quite similar to the effects observed with sugars and inorganic salts (Fig. 3; Tables 2 and 3). This IPTG concentration (0.1 mM) was confirmed as being optimal for pyruvate tolerance (data not included). In contrast, increased biosynthesis of trehalose (JP20) was not beneficial for growth in the presence of three weaker organic acids (formate, acetate, and lactate). These three weak acids inhibited growth at less than half the inhibitory concentrations of pyruvate and inorganic salts, consistent with a mechanism of damage other than simple osmotic stress. Different levels of IPTG induction were also examined, but none was found beneficial for growth with formate, acetate, and lactate (data not included).
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FIG. 7. Growth of W3310 strains under stress from fermentation products. Cultures were grown for 24 h in M9-2% glucose medium containing formate (A), ethanol (B), isopropanol (C), lactate (D), acetate (E), or pyruvate (F). Symbols: , W3110 (wild type); , JP10 (trehalose-negative mutant); , JP20 (JP10, lacI-Ptac-otsBA); , JP20 with 0.1 mM IPTG.
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Our studies indicate that genetically increasing trehalose biosynthesis could potentially improve E. coli-based biocatalysts for the production of commodity chemicals by increasing thermal tolerance. Overproduction of trehalose in E. coli JP20 (M9-2% glucose medium, 24 h) resulted in an increase in final cell densities at temperatures between 37°C and 41°C. Quite analogous improvements in growth were reported for betaine-supplemented B. subtilis for temperatures near the growth maximum (20). In both cases, the protective osmolytes did not increase the upper temperature boundary for growth. Previous studies have also associated trehalose production with the growth of Salmonella enterica at elevated temperatures (5). S. enterica mutants defective in trehalose biosynthesis exhibited a temperature-sensitive phenotype under moderate osmotic stress.
Overproduction of trehalose in E. coli-based biocatalysts may also increase tolerance to high concentrations of salts and sugars present in feedstocks for commercial fermentations and improve tolerance to some fermentation products. Increasing the synthesis of trehalose above that provided by native regulatory systems improved growth in the presence of osmotic-stress agents, such as hexose sugars, inorganic salts, and pyruvate. Additional but smaller benefits to cell growth (24 h) were observed with ethanol and isopropanol. Under these stress conditions, JP20 with a (leaky) lacI-regulated otsBA operon grew to higher densities than the wild-type parent (W3110) or JP10 (defective in trehalose biosynthesis and degradation). For most stress agents, tolerance was further increased by induction of otsBA with 0.1 mM IPTG. These beneficial actions were correlated with differences in intracellular trehalose during growth in M9-2% glucose medium without stress agents.
Osmotic stress is associated with particles in solution, with salts typically providing two- to threefold-higher levels of particles than sugars on a molar basis. Despite this relationship, levels of growth inhibition by hexose sugars and many salts were roughly equivalent on a molar basis. Previous studies have shown that a functional pathway for trehalose biosynthesis contributes to osmotic tolerance with both NaCl and glucose (8, 9, 22). However, the large benefit of increased production from independently regulated otsBA (and IPTG induction) was unexpected. Native otsBA genes cloned from W3110 were functional and used to increase expression from an artificial promoter (Ptac). Although laboratory strains of E. coli, such as W3110, may be less responsive than strains in nature, the otsBA operon in this K-12 line has been reported to retain full trehalose inducibility (3).
Trehalose biosynthesis was less beneficial during growth with pentose sugars (arabinose and xylose) than with hexose sugars (glucose and mannose). On a molar basis, pentoses were more inhibitory than hexoses or inorganic salts (two to four particles), with xylose being the most inhibitory. Inhibition was not substantially reduced by increased biosynthesis of trehalose, an osmoprotectant. The hydrated structure of xylose is similar to that of glucose, and xylose is often used as an analogue for studies of glucose uptake systems in eukaryotes (25). However, competitive inhibition of glucose transport does not appear responsible for the low xylose tolerance of W3110 strains in M9-2% glucose medium. Doubling the glucose concentration in this medium did not alter the sensitivity of W3110 strains to xylose (data not shown).
The inhibition of growth by three weak organic acids (formate, acetate, and lactate) was also examined. Growth was not substantially improved by trehalose biosynthesis in JP20, consistent with other modes of damage, such as a collapse of
pH (29) or a disruption of the envelope (1). These three acids have higher pKa values than pyruvate, a stronger acid, and were approximately twice as inhibitory as pyruvate for growth. The extent of growth inhibition by pyruvate was more similar to that of inorganic salts on a molar basis. Inhibition by pyruvate was substantially reduced by overproduction of trehalose.
Analysis of cell extracts revealed that intracellular trehalose levels correlated well with osmotic tolerance to inorganic salts and sugars and with thermal tolerance. Even in the absence of inducer, JP20 was more tolerant to osmotic stress than the wild type. Cell extracts from JP20 were found to contain significant amounts of trehalose without induction (28 mM). Accumulation of trehalose by uninduced cells probably reflects a low level of gene expression combined with the absence of activities known to degrade this compound. Csonka (9) has estimated that E. coli produces sufficient trehalose to equal about 20% of the osmolar concentration of solutes in the growth medium. Our results are in general agreement. Induced levels of trehalose in JP20 (361 mM) are equivalent to 20 to 60% of the osmolar level at which growth was fully inhibited (the MIC) by inorganic salts, pyruvate, and hexose sugars.
Florida Agricultural Experiment Station publication no. R-10904. ![]()
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,
-trehalose. Adv. Carbohydr. Chem. Biochem. 30:227-256.[Medline]
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