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Applied and Environmental Microbiology, February 2006, p. 1034-1039, Vol. 72, No. 2
0099-2240/06/$08.00+0 doi:10.1128/AEM.72.2.1034-1039.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
E. Servi,1,
T. Katan,2
J. Rollins,4
Y. Okon,3 and
D. Prusky1*
Department of Postharvest Science of Fresh Produce,1 Department of Plant Pathology, Agricultural Research Organization, The Volcani Center, Bet Dagan 50250, Israel,2 Department of Plant Pathology and Microbiology, The Hebrew University of Jerusalem, Faculty of Agricultural, Food and Environmental Quality Sciences, Rehovot 76100, Israel,3 Department of Plant Pathology, University of Florida, Gainesville, Florida 326114
Received 27 April 2005/ Accepted 10 November 2005
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It is not clear, however, whether the environmental conditions that affect PL secretion are determined only by the effect of ammonia on pH or if ammonia also has a direct effect on the regulation of pelB expression by C. gloeosporioides. Our objective in this study was to determine the importance of ammonia accumulation in the secretion of PL. We hypothesized that ammonia and ambient pH are independent signals for the transcriptional regulation of genes required for the disease process of C. gloeosporioides during decay development in avocado fruits. The accumulation of large amounts of ammonia in the decaying tissue ensures transformation from the quiescent biotrophic to the necrotrophic stage of Colletotrichum colonization.
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Four nit mutants were obtained from the wild-type isolate Cg-14 as spontaneous mutants growing on potato dextrose agar plates amended with KClO3 (10). When transferred to secondary medium, the nit mutants were grown in the presence of 3 mM glutamate amended with amounts of KNO3 similar to those described above.
Ammonia was detected with an ammonium test kit (Merck KGaA, Darmstadt, Germany) based on a colorimetric reaction. Samples (0.5 ml) from the culture media were diluted with 4.5 ml of double-distilled water, and the concentration of ammonia was determined according to the the manufacturer's instructions. In brief, the sample containing ammonium was adjusted to pH 13 so that ammonium was transformed to ammonia and could be detected as ammonia in a colorimetric reaction. Concentrations are reported as mmol ammonia.
The pH was measured with a microcombination pH electrode (model 9810BN; Orion, Beverly, MA) in 0.5-ml aliquots sampled at various times after fungal inoculation.
Fruits, ripening parameters, and fruit treatments.
Freshly harvested avocado Fuerte fruits from an orchard at Kibbutz Givat Brenner, Israel, were used for fruit treatment and inoculations. The effect of NH4OH on decay development in vivo was determined by infiltration experiments. NH4OH at a concentration of 0.1 M in 0.05 M phthalate buffer (pH 10.0) was infiltrated into freshly harvested avocado fruits ca. 12 h prior to inoculation with C. gloeosporioides conidial suspensions. Infiltration was performed by dipping fruits in the solution, reducing the atmospheric pressure to 20 mm Hg within 60 s, and then releasing the vacuum. Other fruits, harvested at the same time, were similarly infiltrated with H2O as a control (8). Fruits were inoculated by placing 10 µl of a conidial suspension (106 conidia/ml) on six longitudinally spaced inoculation spots, with three on each side, of the 10 different fruits per treatment (60 inoculation replicates per treatment). Following inoculation, fruits were incubated at 22°C in 95% rH for 24 h in covered plastic containers containing wet paper towels. They were then transferred to ambient (70 to 80%) rH at 22°C until fruit ripening and symptom development were observed (16). The average decay diameter for 10 fruits is reported. Inoculation experiments were repeated three times.
The preformed antifungal compound 1-acetoxy-2-hydroxy-4-oxo-heneicosa-12,15 diene (diene) was extracted from the avocado pericarp (2 g of tissue, 1- to 2-mm-thick slices). Pericarp tissue was homogenized in 95% ethanol in a Sorval Omni-Mixer (Kendro, Asheville, NC) at full speed for 3 min as previously described by Yakoby et al. (28). The collected samples were dried, dissolved in 1 ml of running solvent, and analyzed by high-performance liquid chromatography. Unripe fruits were harvested at a firmness of 120 N, and the fruits were considered ripe when the firmness decreased to below 10 N. Firmness, expressed in newtons (N), was measured with a Chatillon digital force gauge (model DFGS50; Ametek Chatillon, Brooklyn, NY).
Detection of PL in liquid medium.
Hyphae grown on secondary medium were separated by filtration (see above), washed twice with sterile water, frozen with liquid N2, lyophilized, and stored at 80°C until used for RNA or protein extraction. The culture medium filtrate was concentrated on a Rotavapor machine (Buchii, Flawil, Switzerland) at 30°C to 5 ml, dialyzed with a SnakeSkin pleated dialysis tube (10,000-molecular-weight cutoff; Pierce, Rockford, IL) for 24 h against 5 liters of 50 mM Tris-HCl, pH 8.5, reconcentrated to 1 ml, lyophilized, and resuspended in 150 µl sterile water. Protein samples were quantified by the Bradford reagent (Bio-Rad Laboratories, Hercules, CA) protein assay, with bovine serum albumin (Sigma) as the standard.
Samples (2.5 µg of secreted proteins) were loaded onto a 12.5% sodium dodecyl sulfate-polyacrylamide gel (Mini-Protean II; Bio-Rad) and run for 1.5 h at a constant 100 V. Western blot analysis was performed with PL antiserum as previously described (2, 27, 28). Blot analyses were repeated three times, and the results from one representative experiment are presented here.
RNA extraction and Northern blot analysis.
For Northern analysis, samples of hyphae were first lyophilized and then homogenized with a Mini Beadbeater (Biospec Products, Bartlesville, OK) in the presence of 1 g zirconia beads for three periods of 20 s each, and total RNA was extracted with 1 ml of Tri-Reagent (Sigma) for every 25 mg of lyophilized hyphae. RNA samples were prepared according to the manufacturer's instructions (Tri-Reagent technical bulletin MB-205, Sigma). RNAs were quantified by GeneQuant (Pharmacia Biotech, Cambridge, United Kingdom).
Northern blot analysis was conducted by running 10 µg of total RNA in a 1.1% formaldehyde denaturing agarose gel (19). The RNA was blotted onto a Hybond+ nylon membrane (Amersham, Buckinghamshire, United Kingdom) by the capillary method (19) with 20x SSC (1x SSC is 17 mM NaCl and 170 mM sodium citrate). RNAs were fixed by baking for 2 h at 80°C and then subjected to hybridization. All hybridizations were carried out at 65°C, and reaction mixtures were washed with 0.1x SSC. Probes were synthesized by using the Prime a Gene labeling system (Promega, Madison, WI) with [32P]dCTP. The hybridization probes were the 1.1-kb full-length pelB clone (GenBank accession no. U32942), the 1.2-kb pac1 coding sequence from C. gloeosporioides (GenBank accession no. AF539700) (8), and the rRNA gene repeat sequence from Neurospora crassa pMF2 (9). The washed blot was autoradiographed and exposed to a Fuji BAS (Bio Analyzing system) sample screen. Images were captured with a Fuji BAS reader (Fujifilm, Tokyo, Japan).
For real-time PCR, RNAs were extracted from 80 mg (dry weight) of mycelium with an RNeasy Plant mini kit (QIAGEN Sciences, Hilden, Germany) and further purified by treatment with RNase-free DNase (QIAGEN). The reverse transcription reaction was performed with a Reverse-it first-strand synthesis kit (ABgene, Surrey, United Kingdom). cDNA samples were diluted 1:10 to the final template concentration for real-time PCR. Real-time detection was performed with ABsolute SYBR green ROX mix in an ABI Prism 7000 machine (Applied Biosystems [ABI], Foster City, CA). The endogenous control was a ß-tubulin gene, and the calibrator was a no-nitrogen sample. The primers for pelB were 5'-CACCAAGCCCGACTACAGCT-3' (forward) and 5'-AGCCTTACCTTGGAGGAGCC-3' (reverse); the primers for areA (accession no. AY699608) were 5'-ACAGACCACAGGCATTGCAA-3' (forward) and 5'-TGTGGAGACGAAACCCTGAAG-3' (reverse); and the primers for ß-tubulin were 5'-GCAACAACTGGGCCAAGG-3' (forward) and 5'-GCGGACAACATCGAGAACCT-3' (reverse). The primer concentration was 200 nM. Primer efficacy was examined by running different solutions of template and verifying a slope of 3.2 ± 0.2 for a curve of cycle threshold (CT) values versus the log values of template concentrations. Mixtures of all cDNAs used for all the treatments were used as templates for calibration curves. Relative quantification was calculated by the method using 
CT (ABI). The
CT value was determined by subtracting the CT results for the target gene from the CT results for the endogenous control gene and then normalized as suggested by ABI (
CT). The final relative quantification value is
, which represents the level of expression of the gene in relation to the control (no-nitrogen) treatment (relative quantification). Each experiment was repeated three times with similar results, and results for one experiment are presented. The averages presented are the results of two independent cDNA measurements for different RNA samples from the same treatments. The variation between the quantification levels for the same treatment ranged between 10 and 15%.
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FIG. 1. Effect of pH on ammonia secretion by C. gloeosporioides. Samples of medium were quantified for ammonia accumulation at different times after transfer to secondary medium containing KNO3, buffered with phthalate buffer to a pH range of 4.0 to 7.0. Symbols: , pH 4; , pH 5; , pH 6; , pH 6.5; , pH 7. Significance was calculated by comparing the concentrations of ammonia at the different initial pHs on each sampling day and was analyzed statistically by analysis of variance of three replications. Values for points on the same day labeled with the same letter were not statistically different (P < 0.05).
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FIG. 2. Effect of NH4Cl as a nitrogen source on pelB expression and PL secretion during growth of C. gloeosporioides in culture medium. At different times after transfer to secondary medium buffered with phthalate buffer (pH 6.0) in the presence of 50 mM NH4Cl ( ), the level of secreted PL was analyzed by Western blot analysis of concentrated, dialyzed culture medium, and pelB expression was analyzed in the mycelia. Growth of the fungus in the presence of 50 mM KNO3 ( ) was used as a control. (A) pelB expression by real-time PCR. (B) PL secretion in the presence of NH4Cl. (C) PL secretion in the presence of increasing concentrations of NH4Cl 16 h after transfer to secondary medium. Blot analyses were repeated three times, and results from a representative experiment are presented.
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FIG. 3. Ammonia secretion, transcript levels of pelB, and PL secretion by C. gloeosporioides at pH 6.0 in the presence of glutamate (GLU) ( ) or KNO3 ( ) as the nitrogen source in the culture medium. (A) Ammonia accumulation. (B) pelB transcript levels. (C) PL secretion. Following growth on primary medium, mycelia were transferred for 15 h to a medium lacking nitrogen and then transferred to the secondary medium. At different times after transfer to the secondary medium, the following were analyzed: ammonia accumulation, pelB expression (by real-time PCR), and PL secretion (by Western blot analysis). Western blot analysis of secreted PL was performed on concentrated, dialyzed culture medium. Blot analysis was repeated three times, and the results of one representative experiment are presented.
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FIG. 4. Transcriptional activation of pelB and pac1 and PL secretion by C. gloeosporioides as a function of pH levels and nitrogen amendment. The different factors were analyzed 16 h after transfer to the secondary medium buffered with phthalate buffer at pH 4.0 or 6.0 in the presence or absence of KNO3. Northern blots of total RNA were probed with pelB and then sequentially stripped and reprobed with pac1 and rRNA gene (bottom panel) probes. Secreted PL was analyzed by Western analysis. Ethidium bromide staining was used as a loading control.
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Effect of ammonia on virulence.
The direct effect of ammonia on C. gloeosporioides virulence was analyzed by measuring the diameter of decay on avocado Fuerte fruit caused by the addition of ammonia to fruits inoculated with the wild-type Cg-14 strain. Infiltration of fruits with a 0.1 M NH4OH solution in 50 mM phthalate buffer, pH 10, following inoculation with Cg-14 significantly enhanced decay development (Fig. 5). The decay development of fruits infiltrated with 50 mM phthalate buffer at pH 10.0 was similar to that of water-treated fruits. NH4OH did not affect fruit ripening, as measured by fruit firmness or ethylene or CO2 evolution on different days after harvesting (results not shown). The levels of the antifungal compound (diene) in NH4OH- and control-treated fruits declined similarly, from 1,320 to 330 µg1 g fresh weight of fruit peel, suggesting that differential decay development is not affected by a differential decline in the level of the preformed antifungal diene.
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FIG. 5. Effect of NH4OH treatment on decay development by C. gloeosporioides on avocado fruits. Symptoms of decay by C. gloeosporioides wild-type Cg-14 on avocado Fuerte fruits were examined after infiltration with 0.1 M NH4OH in 0.05 M phthalate, pH 10. Fruits were inoculated 12 h after infiltration. Lesion development in NH4OH-treated fruits ( ) was compared to changes occurring on H2O ( )- or 0.05 M phthalate (pH 10) ()-infiltrated fruits. Each experiment contained 10 repetitions (fruits), with a total of 30 replications (10 fruits x 3 replications per fruit). Significance was calculated from comparisons of the diameters of lesion decay by C. gloeosporioides on NH4OH-treated and nontreated fruits on each sampling day and was analyzed statistically with a Student t test. Averages for points on the same day labeled with different letters were statistically different (P < 0.05).
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Drori et al. (8) suggested that the secretion of PL is also subject to nutritional signals, such as the presence of nitrogen. The regulation of nitrogen assimilation is both complex and important for disease development (13). In Colletotrichum acutatum, nitrogen starvation stimulates synchronous preinfection development (11). In Magnaporthe grisea, nitrogen starvation enhances the expression of PTH11 and MPG1, genes affecting appressorium differentiation and formation, respectively (7, 21). In Colletotrichum lindemuthianum, however, mutants of the AREA fungal nitrogen regulators are not affected during the biotrophic stage but must function during the necrotrophic stage (15).
For C. gloeosporioides, the presence of a nitrogen source seems to be a key element in the expression of virulence factors. Nutritional deprivation of primary nitrogen sources has shown that they are critical for PL secretion. PL secretion was observed only with the combination of a suitable environment (pH 6.0) and ammonia production. Increasing the amount of ammonia added to the secondary growth medium also increased the amount of PL secreted. Differential rates of ammonia accumulation at pH 6.0 by C. gloeosporioides in the presence of KNO3 and glutamate resulted in differential activation of pelB expression and PL secretion. In vivo, it is possible that the nitrogen source nutrients for the pathogen's initial growth are provided by protease activity breaking down structural glycoproteins in the plant cell wall (18). C. gloeosporioides, C. acutatum, and Colletotrichum coccodes probably utilize these degraded proteins to secrete up to 3,350 µM ammonia into decayed tissue (16). Ammonia may therefore have the following two key functions: (i) alkalinization of tissue and (ii) direct activation of pelB expression and PL secretion (16, 28). The effect of ammonia on alkalinization of the medium in the presence of NO3 resulted in an increase in the pH level from 4 to 6.5 (16). Alkalinization of the host's decayed tissue also has been observed for apples, tomatoes, and other infected hosts (16). This alkalinization represents the basic signal for activation of the pH-dependent transcriptional regulator pac1, which modulates the activation of pelB and the secretion of PL.
Several experiments were performed to demonstrate the importance of ammonia accumulation and pH on the expression of pathogenicity factors. When the pathogen was grown at pH 6.0 without nitrogen sources, ammonia did not accumulate and pelB expression and PL secretion were not detected; only the pH-dependent transcription activator pac1 was expressed. The addition of a nitrogen source to the same secondary medium resulted in the accumulation of ammonia, pelB expression, and PL secretion. However, the growth of C. gloeosporioides in nitrogen-containing medium at pH 4.0 prevented pac1 and pelB transcript expression and, consequently, PL secretion.
In a second set of experiments in which C. gloeosporioides Nit mutants were grown in the presence of the easily assimilated nitrogen source glutamate, the mutants secreted ammonia, alkalinized the medium, and secreted PL at pH 6.0 as well. Growth of the mutants under similar conditions in the presence of NO3 as the nitrogen source did not enhance the secretion of ammonia or PL or increase the pH.
A second postulated function for ammonia is the direct activation of pelB expression and PL secretion, as observed when ammonia was included as the sole nitrogen source. This hypothesis was supported by the differential accumulation of pelB transcripts and PL secretion when the fungus, grown in the presence of two other nitrogen sources (KNO3 and glutamate), produced different amounts of ammonia. These results suggest that the accumulation of large amounts of ammonia at the infection site during decay development represents a specific condition that is recognized by the pathogen and that activates virulence factors such as pelB expression and PL secretion. Furthermore, infiltration of ammonia into ripening avocado fruits caused a clear increase in decay development by C. gloeosporioides, supporting the importance of ammonia during fungal pathogenicity.
The signal that activates the mechanism of ammonia accumulation and the activation of pelB expression and PL secretion is still not known. The mechanism responsible for reduced fungal sensitivity to high levels of ammonia during fungal attack is also not known. Our present results suggest that one of the signals affecting the process of ammonia secretion is a low environmental pH (4.0). Ammonium is an important nitrogen source for bacteria, fungi, and plants, but it is toxic to animals (22). The ammonium transport proteins (methylamine permeases/ammonium transporters) are ubiquitous in bacteria, archaea, and eukarya (12), are specific for ammonium, and function in the utilization of ammonium as a source of nitrogen (14), but their amounts and activities during fungal pathogenicity have not been described. Members of the MEP/amount family may transport NH4+ across the cytoplasmic membrane and concentrate it in an energy-dependent manner (24). Cell membrane channels with high affinities for ammonium transport that function in both the uptake and excretion of ammonium have recently been described (22). Further studies of these transporters could help explain the mechanism underlying ammonia accumulation by Colletotrichum species.
Our results support the hypothesis that both ambient pH and nitrogen availability are major regulators of C. gloeosporioides pelB transcriptional activation and PL secretion. PL secretion is transcriptionally regulated by pH, and at least one component of a conserved regulatory pathway mediating pH-regulated gene expression, pac1, exists in this fungus (8). Our data suggest that alkalinization by the presence of ammonia is also important for the activation of quiescent C. gloeosporioides infection and for its transformation from the biotrophic to the necrotrophic stage of fungal colonization in the fruit host (16). The accumulation of specific amino acids during fruit ripening (1) could contribute to substrate availability to the pathogen to ensure ammonia production. The ability of the pathogen to accumulate large amounts of ammonia in decaying tissue ensures the activation of pelB expression under optimal pH and nutritional conditions for PL secretion. Altering ammonia secretion and pH-regulated processes, such as pelB expression, could form the basis for a viable strategy to delay, reduce, or prevent disease development by this plant-pathogenic fungus.
H. Kramer-Haimovich and E. Servi contributed equally to this work. ![]()
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