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Applied and Environmental Microbiology, September 2006, p. 6345-6354, Vol. 72, No. 9
0099-2240/06/$08.00+0 doi:10.1128/AEM.00988-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Multiple Contributions of Peroxisomal Metabolic Function to Fungal Pathogenicity in Colletotrichum lagenarium
Makoto Asakura,
Tetsuro Okuno, and
Yoshitaka Takano*
Laboratory of Plant Pathology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan
Received 26 April 2006/
Accepted 14 July 2006

ABSTRACT
In
Colletotrichum lagenarium, which is the causal agent of cucumber
anthracnose,
PEX6 is required for peroxisome biogenesis and
appressorium-mediated infection. To verify the roles of peroxisome-associated
metabolism in fungal pathogenicity, we isolated and functionally
characterized
ICL1 of
C. lagenarium, which encodes isocitrate
lyase involved in the glyoxylate cycle in peroxisomes. The
icl1 mutants failed to utilize fatty acids and acetate for growth.
Although Icl1 has no typical peroxisomal targeting signals,
expression analysis of the GFP-Icl1 fusion protein indicated
that Icl1 localizes in peroxisomes. These results indicate that
the glyoxylate cycle that occurs inside the peroxisome is required
for fatty acid and acetate metabolism for growth. Importantly,
in contrast with the
pex6 mutants that form nonmelanized appressoria,
the
icl1 mutants formed appressoria that were highly pigmented
with melanin, suggesting that the glyoxylate cycle is not essential
for melanin biosynthesis in appressoria. However, the
icl1 mutants
exhibited a severe reduction in virulence. Appressoria of the
icl1 mutants failed to develop penetration hyphae in the host
plant, suggesting that
ICL1 is involved in host invasion. The
addition of glucose partially restored virulence of the
icl1 mutant. Heat shock treatment of the host plant also enabled
the
icl1 mutants to develop lesions, implying that the infection
defect of the
icl1 mutant is associated with plant defense.
Together with the requirement of
PEX6 for appressorial melanization,
our findings suggest that peroxisomal metabolic pathways play
functional roles in appressorial melanization and subsequent
host invasion steps, and the latter step requires the glyoxylate
cycle.

INTRODUCTION
Fungal spores are the infectious propagules responsible for
initiating infection as well as disease dissemination. In the
initial stage of infection, the spores of phytopathogenic fungi
on the plant surface must be under nutrient-limited conditions,
and therefore, infection-related cellular events need to be
promoted through the metabolism of storage compounds. However,
metabolic pathways used by pathogens during infection are poorly
understood. In a part of phytopathogenic fungi, asexual spores
called conidia germinate and develop a specific infection structure
called an appressorium that enables fungal penetration of the
host plant (
4).
Colletotrichum lagenarium, the causal agent
of cucumber anthracnose, forms appressoria that are darkly pigmented
with melanin on the surface of its host plants (
2).
C. lagenarium also forms melanized appressoria on artificial surfaces, such
as glass, in the absence of external nutrients, indicating that
the fungus is able to develop appressoria by utilizing storage
compounds of conidium cells. Conidia of
C. lagenarium contain
large numbers of lipid bodies (
12), and rapid degradation of
lipid bodies occurs during appressorium formation and subsequent
penetration of the host plant, implying that lipolysis provides
the compounds required for appressorium formation and function
(
35). This idea is supported by the finding that the cyclic
AMP signaling pathway is required for appressorium function
and proper lipolysis in
C. lagenarium and the rice blast fungus
Magnaporthe grisea (
25,
35,
30).
We previously identified ClaPEX6 (hereafter referred to as PEX6) encoding a protein involved in peroxisome biogenesis through analysis of nonpathogenic mutants of C. lagenarium generated by plasmid insertional mutagenesis (12). Knockout analysis of the PEX6 gene demonstrated that it is required for fungal pathogenicity in C. lagenarium. The pex6 deletion mutant formed small appressoria with severely reduced melanization that failed to generate penetration hyphae. Melanin is a secondary metabolite required for appressorium function in fungal pathogens, such as Colletotrichum and Magnaporthe species (10, 14). These data suggest that peroxisomal metabolic functions are required for appressorium functionality, especially for appressorial melanization. However, it remains to be elucidated how peroxisomal metabolic pathways contribute to the pathogenicity of C. lagenarium. Peroxisomes typically contain enzymes for reactions involving molecular oxygen and for metabolizing hydrogen peroxide. Another important feature of peroxisomes is the site of ß-oxidation of fatty acids. The pex6 mutant of C. lagenarium consistently failed to utilize fatty acids for vegetative growth, suggesting that the mutant had a defect in the ß-oxidation of fatty acids in its peroxisomes (12).
Utilization of lipids as the sole or main carbon source presupposes a requirement of the glyoxylate cycle to provide hexose residues for nucleotide, cell wall, and amino acid biosynthesis. Enzymes involved in the glyoxylate cycle are suggested to localize in peroxisomes in fungi, including Yarrowia lipolytica (13, 32, 33), whereas Saccharomyces cerevisiae isocitrate lyase (ICL1), a key component of the glyoxylate cycle, is solely cytosolic, even under growth conditions that induce peroxisome proliferation (29). The significance of the glyoxylate cycle for fungal pathogenicity was first underscored by the requirement of isocitrate lyase for the virulence of the pathogenic yeast Candida albicans in mouse (15). Additionally, in the pathogenic bacterium Mycobacterium tuberculosis, disruption of the isocitrate lyase gene attenuated bacterial persistence and virulence in immunocompetent mice (16). It has also been reported that ICL1 is required for pathogenicity in Leptosphaeria maculans, a pathogen of canola, and the rice blast fungus M. grisea (11, 34) and that malate synthase, another key enzyme of the glyoxylate cycle, is required for pathogenicity of the wheat pathogen Stagonospora nodorum (20).
In this report, to investigate roles of the glyoxylate cycle in C. lagenarium, we isolated and functionally characterized the C. lagenarium ICL1 gene, which encodes isocitrate lyase. We show that ICL1-encoded isocitrate lyase is required for the utilization of fatty acids and acetate for growth and that this enzyme distinctly localizes in peroxisomes during fungal infection. Importantly, in contrast to the pex6 mutant, icl1 knockout mutants formed appressoria that were highly pigmented with melanin, suggesting that the glyoxylate cycle in peroxisomes is not essential for appressorial melanization. However, the icl1 mutant exhibited reduced virulence on its host cucumber plant, suggesting that ICL1 in C. lagenarium is involved in fungal infection.

MATERIALS AND METHODS
Fungal strains, media, transformation, and DNA analysis.
C. lagenarium strain 104-T (stock culture of the Laboratory
of Plant Pathology, Kyoto University) was used as the wild-type
strain. All
C. lagenarium cultures were maintained on potato
dextrose agar (PDA) media (3.9% [wt/vol]; Difco, Detroit, MI)
at 24°C in the dark. Protoplast preparation and transformation
of
C. lagenarium were performed according to a method described
previously (
28). Hygromycin- and bialaphos-resistant transformants
were selected on regeneration medium containing 100 µg/ml
hygromycin B (Wako Pure Chemicals, Osaka, Japan) and 250 µg/ml
bialaphos (kindly provided by Nobuyuki Fuchigami, Meiji Seika,
Japan). Minimal medium consisted of 6 g/liter NaNO
3, 0.52 g/liter
KCl, 0.52 g/liter MgSO
4 · 7H
2O, 1.52 g/liter KH
2PO
4,
0.001% thiamine, and 0.1% trace elements supplemented with 10
g/liter glucose. The sole carbon source media contained 1.6%
yeast nitrogen base without amino acids (Difco) and 1% NH
4NO
3,
and pH was adjusted to 6 with Na
2HPO
4. The fatty acid medium
had 0.5% (vol/vol) Tween 80 added to it. The glucose and acetate
media contained 2% glucose and 50 mM sodium acetate, respectively.
Total DNA of
C. lagenarium was isolated from mycelia using the
DNeasy plant mini kit (QIAGEN, Hilden, Germany) according to
the manufacturer's instructions. Restriction enzyme digestion,
cloning, plasmid isolation, and gel electrophoresis were performed
according to the manufacturer's instructions and standard methods
(
18). Genomic DNA gel blot analysis of
C. lagenarium was performed
as described previously (
26). A 2.0-kb fragment containing the
entire
ICL1 gene was amplified by PCR with the primers ICL1spS1
(5'-GTCTTATCCGTCTTCTCTGCCGTC-3') and ICL1spAS1(5'-CGTACATACAGCTCAGGTGCATATCC-3'),
and the amplified fragment was used as a probe. DNA probes were
labeled with digoxigenin-dUTP (Roche Diagnostics Japan) with
the BcaBEST digoxigenin labeling kit (Takara, Ohtsu, Japan).
Plasmid constructs.
ICL1 was mutated using an adaptation of the in vitro transposon tagging procedure previously described (8). A cosmid clone, pD4SNF1, containing ICL1 was used as the target. A gene disruption vector, pKOICL1, was constructed by mobilizing the modified Tn7 transposable element containing the hygromycin-phosphotransferase gene cassette (the GPS-HYG transposon) into pD4SNF1 in vitro (see Fig. 2A). The sequences of the transposon-inserted regions were determined using primers TN7L (5'-ATAATCCTTAAAAACTCCATTTCCACCCCT-3') and TN7R (5'-ACTTTATTGTCATAGTTTAGATCTATTTTG-3'). In pKOICL1, the transposon was inserted into the ICL1 sequence at nucleotide 1314 (amino acid residue 419) (Fig. 1). For analysis of the subcellular localization of Icl1, the plasmid pHGFPICL1, carrying the GFP-ICL1 fusion gene, was constructed. Expression of GFP-ICL1 was controlled by a 221-bp short promoter region of the melanin gene SCD1 because expression of green fluorescent protein (GFP) under the SCD1 short promoter resulted in constitutive GFP fluorescence at all fungal stages examined (28). pCB16EGFPSP was previously constructed by the introduction of enhanced green fluorescent protein (EGFP) and the SCD1 short promoter into pCB1636, containing the hph gene (22, 28). The SCD1 terminator region was amplified with primers SD1THS and SD1TCA (12). The amplified product was digested with HindIII and ClaI and introduced into pCB16EGFPSP, which resulted in pCB16EGFPSPST. The entire ICL1 open reading frame was amplified from pD4SNF1 with the primers ICL1FSB (5'-CGGGATCCCCGCGAACAACATGGTCAACT-3') and ICL1FASE (5'-CGGCGGAATTCCTAGTGGAATTGGTCCTCCGT-3'). ICL1FSB and ICL1FASE contain a BamHI site and EcoRI site, respectively. The amplified product was digested with BamHI and EcoRI and introduced into pCB16EGFPSPST to produce pHGFPICL1. For introduction of pHGFPICL1 into the icl1 mutant DIC1, pHGFPICL1 and pCB1531 carrying a bialaphos-resistant gene (22) were cotransformed into DIC1, and bialaphos-resistant transformants were isolated. Among them, the transformants carrying the GFP-ICL1 fusion gene were selected by PCR analysis. For expression of mRFP1 carrying PTS1, the entire open reading frame of mRFP1 was amplified from mRFP1 in pRSET1b with primers MRFPXKZ (5'-GCC CTCTAGACCAGACACAATGGCCTCCTCCGAGGACGTCATC-3') and MRFPPTS1B (5'-GGCGGATCCTTACAGCTTCGAGGCGCCGGTGGAGTGGCGGCC-3'). pBATP was previously constructed by the introduction of the SCD1 promoter and terminator regions into pCB1531 (12). The amplified product was digested with XbaI and BamHI and introduced into pBATP. The resultant plasmid was designated pBATPMRPTS1. Each PCR amplification was performed with KOD Plus DNA polymerase (Toyobo, Tsuruga, Japan) according to the manufacturer's instructions. pBATPMRPTS1 was introduced into the wild-type strain 104-T, and the transformant MRPTS1 expressing mRFP1 was isolated.
Pathogenicity tests.
Conidia were collected from 7-day-old PDA cultures and suspended
in water, 1 mM glucose, or 1 mM sucrose solutions to a concentration
of approximately 5
x 10
5 conidia per ml. Conidial suspensions
(15 µl each) were drop inoculated onto detached leaves
or cotyledons of cucumber (
Cucumis sativus L. Suyo).
For inoculation through wounded sites, conidial suspension was
spotted onto the wounded sites by a 26G
1/2 needle. To give plants
heat shock, detached cucumber cotyledons were dipped into distilled
water at 50°C for 30 s. Subsequently, the
icl1 mutant was
inoculated onto the heat-treated cotyledon. As a control, cotyledons
were dipped into distilled water at 25°C for 30 s before
inoculation. We performed each pathogenicity test described
above at least three times and obtained similar results from
the repeated experiments.
Assay for appressorium formation and penetration.
Infection-related morphogenesis, including germination and appressorium formation on glass, was observed as described previously (28). Nitrocellulose membranes prepared from Visking cellulose tubing were used as a model substrate (14). For the assay on penetration into the membrane, conidial suspensions were poured onto pieces of the membrane placed in petri dishes. Samples were incubated for 2 days and observed under light microscopy. To assess appressorium formation and subsequent invasion of the host plant, conidial suspensions were spotted onto the lower epidermis of cucumber cotyledons. The epidermal layers of inoculated cotyledons were peeled off and observed under light microscopy. To observe intracellular penetration hyphae, the epidermal layers were stained with lactophenol aniline blue (26).
Fluorescent microscopy.
To assess papilla formation, the nonhost plant Arabidopsis thaliana Col-0 was inoculated with a conidial suspension of the icl1 mutant (5 x 105 conidia per ml), as previously reported (19). Inoculated plants were placed in a plant growth box (CUL-JAR300; Iwaki, Japan) at 25°C for 24 h. To determine the presence of callose deposits, samples were stained with aniline blue as described by Adam and Somerville (1). Material was mounted on a slide in 50% glycerol and examined with a fluorescence microscope (Zeiss Axioskop; Germany) with Zeiss filter set 02 (excitation, 365 nm; dichroic, 395 nm; emission, 420 nm). To stain lipid bodies, conidia were incubated in the presence of 10 µg/ml carpropamid solution on glass slides (9, 28) and stained with 2.5 µg/ml Nile red solution (7). Nile Red fluorescence, mRFP1 fluorescence, and EGFP fluorescence were observed using an Olympus FluoView FV500 confocal microscope (Olympus Optical Co., Tokyo, Japan) equipped with an argon laser, an He:Ne laser, and a 60x Plan Apo (1.4 numerical aperture) oil immersion objective lens. The samples were excited with the argon laser for EGFP and with the He:Ne laser for Nile red and mRFP1. We used a dichroic mirror, DM488/543, a beam splitter, SDM560, and two emission filters, BA505-525 for EGFP and BA560IF for Nile red and mRFP1.
Nucleotide sequence accession number.
Accession no. AB246699 in the GenBank database contains the DNA sequence for the ICL1 gene from C. lagenarium.

RESULTS
Isolation and knockout analysis of the ICL1 gene in C. lagenarium.
To understand the role of the glyoxylate cycle in fungal pathogenesis
of
C. lagenarium, we characterized the
ICL1 gene encoding isocitrate
lyase, one of the principal enzymes of the glyoxylate cycle.
The
C. lagenarium ICL1 gene was identified by sequence analysis
of a genomic clone, pD4SNF1. pD4SNF1 was originally isolated
from the cosmid library of
C. lagenarium as a cosmid containing
a gene homologous to
S. cerevisiae SNF1, known as a factor essential
for the response to glucose starvation (M. Asakura and Y. Takano,
unpublished results). The entire nucleotide sequence of the
ICL1 gene in pD4SNF1 was determined. The
ICL1 gene sequence
contained an open reading frame composed of 546 amino acids
with two introns (Fig.
1 and data not shown). The deduced amino
acid sequence of Icl1 has high homology with those of the isocitrate
lyases Acu3 (84% identity) and Icl1 (82% identity) of
Neurospora crassa and
M. grisea, respectively (
6,
34). To investigate the
role of
ICL1 in
C. lagenarium, we performed knockout analysis.
We constructed pKOICL1 for gene disruption of
ICL1 using an
in vitro transposon tagging procedure (see Materials and Methods)
(
8). pKOICL1 was introduced into the wild-type strain, 104-T,
and hygromycin-resistant transformants were obtained. First,
icl1 strains were screened by PCR analysis against genomic DNA
of six obtained transformants. The PCR screening suggested that
ICL1 is disrupted in all tested transformants (data not shown).
In the two transformants DIC1 and DIC2 of the six transformants,
gene disruption of
ICL1 was confirmed by DNA gel blot analysis
(Fig.
2). The wild-type strain 104-T had the 3.2-kb XhoI fragment
and 10.5-kb XhoI fragment. The DNA gel blot analysis using the
ICL1 gene did not detect any additional fragments, implying
that there were no structural homologs of
ICL1 in
C. lagenarium.
Transformants DIC1 and DIC2 possessed the 3.2-kb XhoI fragment
and lost the 10.5-kb fragment but commonly had the 12-kb XhoI
fragment. These results demonstrated that
ICL1 was disrupted
in DIC1 and DIC2. These
icl1 strains grew normally on PDA, although
growth rates of the mutants were slightly lower than that of
the wild-type strain (Table
1). The
icl1 mutants also showed
reduction in growth rate on minimal media (data not shown).
Mycelial colonies of the
icl1 mutants on PDA were darkly melanized,
as seen in the wild-type strain (data not shown). The number
of conidia formed on culture of the
icl1 mutants grown on PDA
was similar to that produced by the wild-type strain (Table
1). However, the
icl1 mutants failed to grow on fatty acids
as a sole carbon source, which was also observed in the
pex6 mutants, whereas the
icl1 mutants grew normally on glucose medium
(Fig.
3). These results suggest that
ICL1 encodes an isocitrate
lyase that is essential for fatty acid metabolism in
C. lagenarium.
The
icl1 mutants also failed to grow on acetate medium, whereas
the
pex6 mutants showed slight growth on this medium (Fig.
3).
The ICL1-encoded isocitrate lyase localizes in peroxisomes.
Peroxisomal matrix proteins generally possess peroxisomal targeting
signals (PTSs) (
21). Most peroxisomal matrix proteins possess
PTS1 at the C terminus, whereas some carry PTS2 at the N terminus.
Analysis of the amino acid sequence of Icl1 from
C. lagenarium suggests that it does not have a typical PTS1 or PTS2. To investigate
the intracellular location of Icl1 in
C. lagenarium, we performed
expression analysis of the GFP-Icl1 fusion protein. The
GFP-
ICL1 fusion gene, with the C terminus of
GFP fused to
ICL1, was constructed.
To assess functionality of this fusion gene, the
GFP-
ICL1 fusion
gene was introduced into the
icl1 mutant DIC1. As a result,
the transformant GIC1 carrying the
GFP-
ICL1 fusion gene showed
normal growth on fatty acids, unlike the parental strain DIC1,
suggesting that the fusion gene was functional (Fig.
4A). We
investigated the subcellular location of GFP-Icl1 in conidium
cells of the strain GIC1. The GFP-Icl1 signals formed punctate
green dots (data not shown), whereas expression of intact GFP
resulted in a diffuse green fluorescence (data not shown), implying
that GFP-Icl1 was localized in the peroxisomes. We also observed
punctate dots of GFP-Icl1 signals in vegetative mycelia grown
on PDA (data not shown). We introduced the
GFP-
ICL1 gene into
the strain MRPTS1, which expresses monomeric red fluorescent
protein (mRFP1) that possesses PTS1 at its C terminus (
3). In
the transformants, which contained two fusion genes, colocalization
of mRFP1-PTS1 and GFP-Icl1 was observed (Fig.
4B). This result
indicates that Icl1 is localized in the peroxisomes in conidia
of
C. lagenarium, despite Icl1 having no typical PTS. We also
investigated the cellular localization of GFP-Icl1 during appressorium
formation and found that GFP-Icl1 was localized in the peroxisomes
of appressorium cells, suggesting that Icl1 is localized in
peroxisomes in the infection structure of
C. lagenarium (Fig.
4C). We investigated localization of Icl1 in vegetative hyphae
grown on media containing glucose or fatty acid as a sole carbon
source and found that Icl1 was localized in peroxisomes inside
vegetative hyphae under both conditions (data not shown).
The glyoxylate cycle is not essential for appressorial melanization and lipolysis.
We subsequently investigated germination and appressorium formation
of the
icl1 mutants on glass at 2 h, 4 h, 6 h, 8 h, and 12 h
after incubation and found that the mutants germinated and developed
appressoria as did the wild-type strain (Fig.
5A, Table
1, and
data not shown). The
icl1 mutants also germinated and developed
appressoria on host plant cucumber, as did the wild-type strain
(data not shown). Thus,
ICL1 is not essential for germination
and appressorium morphogenesis in
C. lagenarium. Notably, appressoria
formed by the
icl1 mutants were darkly pigmented with melanin,
in contrast to the nonmelanized small appressoria formed by
the mutant disrupted in the peroxin Pex6 involved in peroxisome
biogenesis (Fig.
5A). These results suggest that
ICL1 is dispensable
for appressorial melanization, and the defect of the
pex6 mutant
in appressorial melanization is not related primarily to the
glyoxylate cycle in peroxisomes. Malonyl coenzyme A (CoA) derived
from acetyl-CoA is used for biosynthesis of dihydroxynaphthalene
melanin of
C. lagenarium (
5). Rapid lipolysis during appressorium
formation suggests that a large supply of fatty acids is subjected
to ß-oxidation in peroxisomes. Based on the finding
that the glyoxylate cycle is not essential for appressorial
melanization, it is likely that the ß-oxidation of
fatty acids in peroxisomes produces acetyl-CoA that is transported
into the cytosol and utilized for melanin biosynthesis in appressorial
cells. In addition to the difference in appressorial melanization,
we found a difference in lipid metabolism in appressoria between
the
pex6 mutants and the
icl1 mutants. Conidia of
C. lagenarium contain large numbers of lipid bodies that can be stained with
Nile red (
7), and lipid bodies are highly degraded during appressorium
formation (
35). Because Nile red is not efficiently incorporated
into melanized appressoria, conidia were incubated with the
melanin biosynthesis inhibitor, carpropamid (
9), and lipid bodies
inside the nonmelanized appressoria were then stained with Nile
red (
35). The Nile red assay demonstrated that appressoria of
the
pex6 mutants possessed a large amount of lipid bodies, unlike
the wild-type strain (Fig.
5B). Large lipid bodies frequently
remained in conidium cells without moving to appressorial cells
in the
pex6 mutants. This suggests that
PEX6 is involved in
the mobilization and metabolism of lipid bodies in
C. lagenarium.
In contrast, the
icl1 mutants degraded lipid bodies, as did
the wild-type strain (Fig.
5B). This result suggests that disruption
of the
ICL1-encoded isocitrate lyase has no strong effects on
lipolysis during the infection-related morphogenesis of
C. lagenarium.
The glyoxylate cycle is required for fungal virulence.
Pathogenicity of the
icl1 mutants was assayed by drop inoculation
of conidial suspension onto detached cucumber leaves and cotyledons.
Lesions were formed at most of the sites inoculated with the
wild-type strain. In contrast, the
icl1 mutant DIC1 significantly
reduced the frequency of lesion formation when they were inoculated
on cucumber leaves. However, DIC1 often formed lesions in cucumber
leaves, whereas the
pex6 mutant DPE1 did not form any lesions
(
12; data not shown). Reduction in lesion formation was more
obvious when DIC1 was inoculated on cucumber cotyledons (Fig.
6A). We obtained similar results from the inoculation experiments
of the other
icl1 mutant DIC2 (data not shown). These results
suggest that the
icl1 mutants have a defect in the fungal infection
process; however, they do not lose pathogenicity completely.
The introduction of the
GFP-
ICL1 fusion gene restored the defect
of the
icl1 mutant DIC1, i.e., the strain GIC1 carrying the
fusion gene formed lesions on cucumber cotyledons as did the
wild-type strain (Fig.
6A). These results demonstrate that
ICL1 is involved in fungal pathogenicity of
C. lagenarium. Subsequently,
postinvasion mycelial growth, termed invasive growth, of the
icl1 mutants inside cucumber tissue was assessed. Invasive growth
ability was assessed by inoculation of conidial suspension on
wound sites of the host plant. The melanin-deficient
pks1 mutant,
ALB1, was inoculated as a positive control because this strain
lacks appressorial penetration ability; however, it can grow
invasively inside plants (
24). In the invasive growth assay
for cucumber, the
icl1 mutants formed lesions, as did the
pks1 mutants (Fig.
6B), suggesting that
ICL1 is dispensable for invasive
growth inside plant tissue.
Requirement of ICL1 for appressorium-mediated host invasion.
As mentioned above, the
icl1 mutants developed melanized appressoria
like the wild-type strain, and
ICL1 is dispensable for invasive
growth. Therefore, it would be expected that the
icl1 mutants
have a defect in the appressorium-mediated penetration stage
of infection. Consistent with this, a penetration assay with
cucumber cotyledons revealed that the
icl1 mutants failed to
generate penetration hyphae in the host plant (Fig.
7A and B).
When the wild-type strain was inoculated on cucumber cotyledons,
35.7% ± 9.2% (mean ± standard deviation) of appressoria
generated intracellular penetration hyphae at 4 days postinoculation
(dpi). In contrast, the penetration frequencies of the
icl1 strains, DIC1 and DIC2, at 4 dpi were 4.3% ± 1.4% and
3.7% ± 0.9%, respectively. The penetration frequency
of DIC1 was still low at 10 dpi (data not shown). Furthermore,
the penetration frequency of GIC1, the complementation strain
with
GFP-
ICL1, was 30.0% ± 4.6%, suggesting that GIC1
formed penetration hyphae as did the wild type (Fig.
7A and B).
These results indicate that
ICL1 is involved in appressorium-mediated
invasion of the host plant.
C. lagenarium forms appressoria
on the nonhost plant,
Arabidopsis thaliana; however, it fails
to generate penetration hyphae accompanied with strong elicitation
of papilla formation (
19). We have shown that papillae are not
induced by the
C. lagenarium mutant 82335, which has a defect
in the formation of penetration pegs, suggesting that the penetration
peg is a possible inductive cue for papilla formation (
19).
To assess whether the
icl1 mutant was able to develop a penetration
peg, we inoculated the
icl1 mutant of
C. lagenarium on
Arabidopsis and investigated the deposition of papillary callose. Papillary
callose formed beneath the appressoria of the
icl1 mutant (Fig.
7C). Thus, it appears that the
icl1 mutants retain the ability
to develop penetration pegs. Consistent with this result, the
icl1 mutants penetrated the artificial membranes, nitrocellulose
membranes, as did the wild-type strain, suggesting that the
icl1 mutants retain basic appressorial penetration functions,
including the ability to form a penetration peg and subsequent
penetration hyphae (Fig.
7D).
Appressorium-mediated host invasion and the glyoxylate cycle.
Scytalone, an intermediate in melanin biosynthesis, restored
appressorial melanization in the
C. lagenarium pex6 mutants;
however, it did not restore pathogenicity of
pex6 mutants (
12).
In contrast, the addition of glucose partially restored pathogenicity
as well as appressorial melanization in the
pex6 mutants (
12).
This suggests that
pex6 mutants have other pathogenicity-related
defects in addition to the defect in appressorial melanization.
Based on this, we assessed the effects of glucose on the virulence
of
icl1 mutants. When we inoculated the
icl1 mutants on cucumber
cotyledons in the presence of 1 mM glucose, the
icl1 mutants
increased lesion formation (Fig.
8A). Partial remediation of
virulence in the
icl1 mutant was also observed in the presence
of 1 mM sucrose (Fig.
8A). The finding that glucose and sucrose
partially restored virulence of the
icl1 mutants implies that
gluconeogenesis plays a role in host invasion via the glyoxylate
cycle. Recently, we characterized the
APH1 gene, which is required
for appressorium-mediated host invasion of
C. lagenarium, and
showed that heat shock treatment of cucumber leaves enabled
the
aph1 mutant to infect (
27). We assessed the effect of heat
shock treatment on the infection ability of the
icl1 mutant
and found that heat shock treatment permitted the
icl1 mutant
to form lesions in common with the
aph1 mutant (Fig.
8B).

DISCUSSION
Genomic Southern blot analysis suggested that there are no structural
homologs of
ICL1 in
C. lagenarium. Consistent with this,
Magnaporthe grisea, related to
Colletotrichum species, has a single isocitrate
lyase gene in the whole-genome sequence. Also, the
icl1 mutants
of
C. lagenarium failed to utilize fatty acid and acetate, suggesting
that it is unlikely that there is no second isocitrate lyase
in
C. lagenarium and that disruption of
ICL1 causes inactivation
of the glyoxylate cycle.
Colocalization of the GFP-Icl1 fusion proteins with mRFP1-PTS1 indicated that the ICL1-encoded isocitrate lyase is localized in peroxisomes; however, the amino acid sequence of C. lagenarium Icl1 revealed that Icl1 has neither typical PTS1 nor PTS2. The isocitrate lyases of N. crassa and M. grisea also lack typical PTS1 and PTS2 (Fig. 1) (6, 34). However, density gradient centrifugation analysis implied that isocitrate lyases of N. crassa and Aspergillus nidulans are located in peroxisomes (13, 33), suggesting that isocitrate lyases of filamentous fungi are commonly localized in peroxisomes. The mechanism for targeting C. lagenarium Icl1 to peroxisomes remains unclear. Icl1 could be transported into peroxisomes by a piggyback mechanism, i.e., transportation via interaction with a protein carrying PTS. Alternatively, Icl1 might possess an unidentified signal sequence that is used to target peroxisomes. In contrast with Icl1 of C. lagenarium, isocitrate lyases of S. cerevisiae are cytosolic, even under growth conditions that induce peroxisome proliferation (29). In C. lagenarium, the icl1 mutant is unable to grow on acetate medium, whereas the pex6 mutant grows slightly on this medium (Fig. 3). Icl1 of the pex6 mutant might locate in the cytosol and partially function in the glyoxylate cycle. However, the growth ability of the pex6 mutant on acetate medium was lower than that of the wild-type strain. Thus, it is likely that the localization of Icl1 in peroxisomes is important for the efficiency of the glyoxylate cycle in C. lagenarium.
The ß-oxidation of fatty acids is a well-conserved metabolic process that degrades fatty acids to acetyl-CoA. It is likely that rapid lipolysis produces fatty acids, and the fatty acids that are generated are subjected to ß-oxidation in peroxisomes to produce acetyl-CoA during appressorium formation in C. lagenarium (12, 35). Functional analysis of PEX6 revealed that it plays a role in peroxisomal metabolic function for appressorium-mediated infection, especially the melanization of appressoria (12). In contrast, the icl1 mutants formed melanized appressoria, suggesting that the glyoxylate cycle is not essential for appressorial melanization in C. lagenarium. This finding suggests that acetyl-CoA, generated by ß-oxidation of fatty acids, is transported from peroxisomes into the cytosol via carnitine acetyltransferase and is utilized for melanin biosynthesis in appressoria. Consistent with this idea, PTH2, which encodes a putative carnitine acetyltransferase, is required for full pathogenicity of M. grisea, although detailed analysis of PTH2 has not yet been performed (23). However, we cannot currently exclude the possibility that the glyoxylate cycle partially contributes to appressorial melanization in C. lagenarium. The pex6 mutants did not undergo efficient lipolysis during infection-related morphogenesis, suggesting that peroxisomal function is involved in the regulation of lipid metabolism in the fungal infection process. However, in contrast to the pex6 mutant, impaired lipolysis was not observed in the icl1 mutant, suggesting that disruption of Icl1 involved in the glyoxylate cycle did not have an obvious effect on the regulation of lipolysis. We consider that the ß-oxidation pathway for fatty acids is associated with the regulation of lipolysis during appressorium formation; however, it remains unclear how this metabolic pathway affects lipolysis.
The icl1 mutants of M. grisea exhibited delayed germination and appressorium development in comparison with the wild-type strain (34). In contrast, the C. lagenarium icl1 mutant germinated and formed appressoria without delay. Contribution of the glyoxylate cycle to infection-related morphogenesis seems to be uncommon among these pathogens. The glyoxylate cycle provides a means for cells to assimilate two-carbon compounds into the tricarboxylic acid cycle and channel these via gluconeogenesis to generate glucose. The icl1 mutants of C. lagenarium have a defect in appressorium-mediated invasion of the host plant, and the addition of glucose or sucrose partially restored virulence of the icl1 mutants. Based on these findings, we are currently considering that gluconeogenesis mediated by the glyoxylate cycle is probably important for appressorium-mediated host invasion.
The abilities of the icl1 mutant (i) to elicit papilla on A. thaliana and (ii) to penetrate into cellophane suggest that appressoria formed by the mutants retain the basic functions required for penetration. Also, a pathogenicity test of the icl1 mutant on heat-treated cucumber suggests that the impaired virulence in the icl1 mutant that we observed is likely to be associated with defense responses of the host plant. Together with partial remediation of pathogenicity in the presence of glucose, it is possible that the icl1 mutant has a defect in cell wall biosynthesis that is related to the protection of fungal cells from plant defense responses. We recently reported that the APH1 gene of C. lagenarium encodes a tRNA methylase required for appressorium-mediated host invasion (27). Heat shock treatment restored virulence of the aph1 mutant, in common with the icl1 mutant, although it remains to be elucidated how Aph1 functions in the host invasion step. Additionally, C. lagenarium formed melanized appressoria on the nonhost plant, A. thaliana; however, it failed to generate penetration hyphae, suggesting that nonhost resistance blocks appressorium-mediated invasion (19). In contrast to C. lagenarium, it is likely that the adapted Colletotrichum higginsianum suppresses preinvasion resistance of A. thaliana (19). Based on these findings, fungal factors that resist and/or suppress plant defense must be critical for successful appressorium-mediated host invasion.
In this report, we have shown that the glyoxylate cycle is required for virulence of the fungal plant pathogen C. lagenarium. It was recently reported that two isocitrate lyases (ICL1 and ICL2) are jointly required for virulence of M. tuberculosis, the etiologic agent of leprosy and tuberculosis (17). Importantly, a dual-specific isocitrate lyase inhibitor blocked the growth of M. tuberculosis on fatty acids and in macrophages, implicating glyoxylate inhibitors as new drug candidates for the treatment of tuberculosis. Our analysis, including phenotypic comparison of the icl1 mutant with the pex6 mutant, strongly suggests pivotal roles for other aspects of peroxisomal metabolism in fungal phytopathogenicity in addition to the glyoxylate cycle. Further functional analysis of other peroxisomal matrix proteins, such as enzymes involved in the ß-oxidation of fatty acids, will be important to understand the multiple roles of peroxisomes in fungal pathogenicity. This analysis will also provide useful information for the development of new drugs against plant and animal pathogens.

ACKNOWLEDGMENTS
We thank Roger Y. Tsien for providing the mRFP1 gene. We also
thank Junko Yamauchi for construction of pBATPMRPTS1, Eriko
Oshiro for construction of pCB16EGFPSPST, and Kazuyuki Mise
for valuable discussion.
This work was supported in part by a Grant-in-Aid (15780035) for Young Scientists (B), a Grant-in-Aid (13306005) for Scientific Research (A) from the Japan Society of the Promotion of Science, and a Grant-in-Aid (12146202) for Scientific Research on Priority Areas from the Ministry of Education, Culture, Sports, Science and Technology, Japan.

FOOTNOTES
* Corresponding author. Mailing address: Laboratory of Plant Pathology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan. Phone: 81 75 753 6133. Fax: 81 75 753 6131. E-mail:
ytakano{at}kais.kyoto-u.ac.jp.


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Applied and Environmental Microbiology, September 2006, p. 6345-6354, Vol. 72, No. 9
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