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Applied and Environmental Microbiology, June 2007, p. 3887-3895, Vol. 73, No. 12
0099-2240/07/$08.00+0 doi:10.1128/AEM.02912-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
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Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Porto, Portugal,1 Escola Superior Agrária de Castelo Branco, Castelo Branco, Portugal,2 Department of Food Science, Cornell University, Ithaca, New York3
Received 17 December 2006/ Accepted 30 January 2007
| ABSTRACT |
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| INTRODUCTION |
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A recent preliminary microbiological characterization of alheiras, traditional smoked meat sausages produced in northern Portugal (5), showed that more than 60% of the lots analyzed were contaminated with L. monocytogenes at levels higher than 100 CFU/g (5). These smoked meat products represent an important part of the diet in rural areas of Portugal and are also becoming increasingly popular in urban areas. For example, annual production of alheiras in the Mirandela region ("alheiras de Mirandela"), the main alheira-producing region, has been increasing since 1998 and reached an annual production of 136 tons in 2003 (37, 38). While alheiras are generally not considered RTE foods, they are often consumed without heating that is sufficient to kill L. monocytogenes. Thus, the presence of L. monocytogenes in these products represents a potential food safety issue.
Locally produced and artisanal foods may represent potentially important sources of human listeriosis, as supported by a large listeriosis outbreak in France (279 cases) linked to the consumption of pork tongue in jelly (19). We thus conducted this study to better understand L. monocytogenes contamination patterns in alheiras through the application of modern molecular and tissue culture methods. Specifically, we characterized a collection of 128 L. monocytogenes isolates from alheiras using subtyping techniques. A subset of isolates was further characterized using tissue culture invasion assays to evaluate the pathogenic potential of L. monocytogenes present in alheiras. The goal of this study was not only to specifically study L. monocytogenes contamination patterns in alheiras but also to more broadly demonstrate how modern microbiological approaches can be used to characterize L. monocytogenes contamination patterns in traditional and often locally produced foods. Improved understanding of L. monocytogenes contamination in artisanal foods will also be critical for better attribution of food-borne listeriosis cases to specific specialty food groups that may not currently be considered in risk assessments.
| MATERIALS AND METHODS |
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ebam/bam-a2.html#tables). Due to logistical constraints (i.e., the availability of appropriate supplies), only a subset of samples was also tested by two other methods. Specifically, for 36 out of 46 composite samples, L. monocytogenes detection was also performed using the VIDAS automated immunoassay system (bioMérieux, Marcy l'Etoile, France). Briefly, the initial homogenate (25 g of composite alheiras sample in 225 ml of half Fraser selective broth) that was used for MPN determinations was incubated at 30°C for 24 h. Subsequently, 0.1 ml of this broth was transferred to 10 ml Fraser selective broth. After an incubation at 37°C for 24 h, 0.5 ml of the Fraser selective broth was inoculated into VIDAS strips. For all samples positive by VIDAS, one loop of the Fraser selective broth was streaked onto PALCAM agar and five presumptive L. monocytogenes colonies were confirmed as described above. In addition, for 26 of the 46 composite samples, L. monocytogenes enumeration was also performed according to ISO 11290-2 (18). The initial homogenate was incubated at 20°C for 1 h for resuscitation, and subsequently, the homogenates and serial tenfold dilutions were surface plated in duplicate onto PALCAM plates, which were incubated at 37°C for 48 h. Presumptive L. monocytogenes colonies were confirmed as described above. These methods are detailed here, as some of the isolates obtained by these methods were used for subtyping (see Tables S1 and S3 in the supplemental material).
Isolate information.
All isolates were stored frozen at 80°C. Isolate information and subtyping data from this study are archived and freely available through the Pathogen Tracker 2.0 database (http://www.pathogentracker.net).
Resistance typing and molecular serotyping.
Overall, 128 L. monocytogenes isolates were characterized by subtyping (see Table S1 in the supplemental material). For composite samples that yielded only a few confirmed L. monocytogenes colonies, all isolates obtained by the different detection methods (MPN method, VIDAS, or ISO) were characterized by subtyping. For all other positive samples, approximately 10% of confirmed L. monocytogenes isolates from a given sample (i.e., 1 to 15 isolates per composite sample, yielding 2 to 25 isolates per processor) were selected for subtyping.
Molecular serotyping was performed using a previously described multiplex PCR assay (4) that detects serotype-specific marker genes. This assay differentiates five L. monocytogenes subtypes and classifies the four most common disease-associated serotypes (i.e., 1/2a, 1/2b, 1/2c, and 4b) into unique subgroups. Each multiplex PCR profile (A to E) contains L. monocytogenes isolates belonging to more than one serotype, including profiles A (serotypes 1/2a and 3a), B (serotypes 1/2b, 3b, and 7), C (serotypes 1/2c and 3c), D (serotypes 4b, 4d, and 4e), and E (serotypes 4a and 4c) as noted previously (4). All isolates were also characterized for resistance to cadmium and arsenic (29) and to tetracycline (46) using previously reported methods (29, 46).
PFGE.
Pulsed-field gel electrophoresis (PFGE) of all 128 isolates characterized by resistance typing and molecular serotyping was performed according to the standard PulseNet protocol of the CDC (13) using a CHEF Mapper XA (Bio-Rad Laboratories, Hercules, CA). XbaI-digested Salmonella enterica serovar Braenderup (CDCH9812) DNA was used as a reference size standard (16). PFGE pattern images were acquired using a Bio-Rad Gel Doc with Multi-Analyst software (version 1.1) (Bio-Rad Laboratories) and compared using the Applied Maths BioNumerics version 3.5 software package (Applied Maths, Sint-Martens-Latem, Belgium). Similarity clustering analyses were performed with BioNumerics using the unweighted pairs group matching algorithm and the Dice correlation coefficient with a tolerance of 1.5% and an optimization of 1.5%. Combined PFGE types (based on both ApaI and AscI patterns) were given a four-digit sequential number (e.g., 0366).
Simpson's index of discrimination.
Molecular diversity and the suitability of typing methods for the differentiation of strains within independent populations were determined using Simpson's numerical index (D) as described by Hunter and Gaston (15). Values for D range between 0 and 1, with a value of 1 indicating the most diverse population and thus the most discriminatory subtyping method.
Caco-2 invasion assays.
For each processor, one isolate representing a given typing profile (i.e., a combination of molecular serotypes and resistance types) was selected for characterization using a Caco-2 invasion assay, yielding a total of 21 isolates (as the same typing profiles were sometimes found in products from two to five processors) that were tested for invasion. Caco-2 invasion assays were performed as previously described (32) with minor modifications. The tumor-derived human colorectal epithelial cell line Caco-2 (ATCC HTB-37) was grown using Dulbecco's minimal essential medium (DMEM) with Earle's salts (Gibco, Gaithersburg, MD) containing 20% fetal bovine serum (HyClone, Salt Lake City, UT), 1% nonessential amino acids, 1% sodium pyruvate, 1.5 g/liter sodium carbonate (Gibco), penicillin G (100 U/ml), and streptomycin (100 µg/ml). For invasion assays, 5.0 x 104 Caco-2 cells were seeded into 24-well plates (Costar, Corning, NY) in DMEM with fetal bovine serum, but without antibiotics. After Caco-2 cells were subsequently grown for 48 h at 37°C, Caco-2 monolayers were inoculated with approximately 2 x 107 L. monocytogenes CFU/well. L. monocytogenes isolates were grown in brain heart infusion at 30°C for 18 h without shaking prior to inoculation. Inoculated Caco-2 monolayers were incubated at 37°C for 30 min, followed by three washes with 1 ml sterile phosphate-buffered saline to remove any unattached, extracellular L. monocytogenes. Subsequently, 1 ml of prewarmed fresh DMEM (prepared as described above, but without antibiotics) was added. At 45 min postinoculation, the medium was aspirated and 1 ml of fresh Caco-2 medium containing 150 µg/ml gentamicin (Gibco) was added to kill remaining extracellular bacteria. At 90 min postinoculation, the medium was aspirated and Caco-2 cells were lysed by the addition of 500 µl of ice-cold sterile distilled water and vigorous pipetting. After cell lysis, intracellular L. monocytogenes cells were enumerated by plating (with an automated spiral plater [Spiral Biotech, Norwood, MA]) on brain heart infusion agar plates, which were subsequently incubated at 37°C for 24 h.
A standard laboratory control strain (10403S) was included as a control in each invasion assay. Four independent invasion assays were performed for each L. monocytogenes isolate tested. For the first assay, L. monocytogenes populations used for the inoculation of Caco-2 cells were enumerated. Because the bacterial numbers in the cultures were very consistent between strains, the inoculum in the subsequent experiments was verified only by using readings of the optical density at 600 nm. For each experiment, invasion efficiencies for different isolates were reported as intracellular bacterial numbers recovered from each well (at 90 min postinfection) relative to recovered numbers for 10403S.
Automated ribotyping.
L. monocytogenes isolates that had reduced Caco-2 invasion efficiencies were characterized by automated EcoRI ribotyping using the RiboPrinter microbial characterization system (DuPont Qualicon, Wilmington, DE) as previously described (43). Ribotype patterns were analyzed using the RiboPrinter software, which normalizes fragment pattern data for band intensity and relative band position compared to those of the molecular weight marker. The RiboPrinter automatically assigns to each ribotype pattern a DuPont identification number (e.g., DUP-1039), which was confirmed by visual inspection. If visual inspection revealed that a given DuPont identification number included more than one distinct ribotype pattern, which generally differed by the position of only one weak band, then each pattern was designated with an additional alphabetized letter (e.g., DUP-1039A and DUP-1039B) (43).
inlA sequencing.
For seven L. monocytogenes isolates that showed reduced invasion efficiencies in Caco-2 cells (a less than 20% average invasion efficiency relative to 10403S [Table 2; see Table S1 in the supplemental material]), we initially sequenced approximately 800 nucleotides (nt) at the 5' end of inlA using PCR amplification and sequencing with primers inlA pro F and inlA pro R (see Table S2 in the supplemental material; R. Orsi and M. Wiedmann, unpublished data). As no premature stop codons were found in the 5' end of inlA in six L. monocytogenes isolates, the entire inlA open reading frame (except for 2 to 26 nt at the 3' end for four isolates) was sequenced for these isolates by using additional sets of primers (see Table S2 in the supplemental material) (32). Nucleotide sequences were proofread and aligned with SeqMan and MegAlign (part of the DNAStar software package; Lasergene, Madison, WI), respectively.
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| RESULTS |
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PFGE differentiated the 128 isolates into 21 ApaI and 18 AscI restriction patterns that yielded 26 combined ApaI and AscI PFGE types (Fig. 1). Simpson's index further confirmed that PFGE was considerably more discriminatory (D = 0.94) compared to molecular serotyping and resistance typing. ApaI PFGE showed higher discriminatory power (D = 0.93) than did AscI PFGE (D = 0.89). The combination of molecular serotyping, resistance typing, and PFGE typing data yielded 28 types (D = 0.94) compared to 26 PFGE types (D = 0.94), indicating that the use of these other methods in addition to PFGE provides for a limited increase in discriminatory power. The number of PFGE types found among isolates from one composite sample ranged from one to five (Table 1).
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A total of 24 PFGE types were unique among the isolates characterized in this study compared to PFGE patterns for 539 L. monocytogenes isolates that represent 495 isolates from the northeastern United States (predominantly New York) (8) and 44 isolates in a diversity collection, which includes isolates from selected outbreaks (7). PFGE type 130, which was represented by six isolates characterized in this study, had previously been assigned to one human clinical isolate as well as to one isolate from an urban environment, both collected in New York State (8). PFGE type 197, which was represented by four isolates characterized in this study, had previously been assigned to one isolate obtained from an RTE meat product (ham) in New York State.
Subtype patterns in composite samples from different processors.
A total of 11 composite samples contained multiple PFGE types (i.e., between two and five PFGE types per composite sample) (Table 1). In contrast, for nine composite samples that had multiple isolates characterized by PFGE, all isolates showed the same PFGE type (Table 1).
When considering all composite samples tested from a given processor, products from a total of eight processors yielded multiple PFGE types with two to five different PFGE types per processor. While multiple PFGE patterns found in products from a given processor were usually clearly distinct (differences of more than three bands), products from four processors included isolates with closely related PFGE patterns (differences of three bands or less). For example, composite samples from processor 11 yielded isolates exhibiting two closely related restriction patterns (358 and 362); the ApaI patterns of these isolates differ by only two bands (i.e., the presence of only a 400-kb band in type 358 and the presence of only a 375-kb band in type 362). For products from four processors (2, 4, 9, and 10), all isolates had the same PFGE pattern.
For four processors (7, 8, 10, and 11), isolates with the same PFGE type were found in composite samples obtained on both sampling dates; the time between the two sampling dates ranged from 6 to 7 weeks (Table 1); for two of these processors, all samples collected were vacuum or MAP packaged, suggesting that contamination did not occur at the retail stage or during distribution (Table 1). These findings indicate the persistence of a given PFGE type in the production chain of alheiras produced by these four processors. Processor 7 (persistent PFGE type 356) showed high levels of L. monocytogenes (MPN of >240 L. monocytogenes cells/g) in all four composite samples. The other three processors with evidence for persistence showed high levels of L. monocytogenes (MPN > 240 L. monocytogenes cells/g) in composite samples collected on sampling date 1, while levels in composite samples from sampling date 2 were lower (MPN
5 L. monocytogenes cells/g), possibly because processors took corrective actions after being informed of the results from sampling date 1.
Invasion capability of selected L. monocytogenes subtypes, ribotyping, and inlA DNA sequencing.
We compared the abilities to invade Caco-2 cells of 21 L. monocytogenes isolates from alheiras representing each typing profile observed per processor; isolates were considered to have the same typing profiles if they had the same molecular serotype and cadmium/arsenic/tetracycline resistance type. The 21 isolates showed average intracellular bacterial numbers (i.e., invasion efficiencies) relative to the control strain 10403S ranging from 6.4 to 393.5% (Fig. 2). Natural food isolates with reduced invasion efficiency in Caco-2 cells have previously been shown to carry mutations in inlA that lead to premature stop codons (PMSCs), which appear responsible for reduced invasiveness (20, 21, 32, 33, 35, 40). Therefore, we screened for inlA PMSC mutations in the seven L. monocytogenes isolates from alheiras showing relative invasion efficiencies of <20%, indicating a reduced invasion phenotype in vitro (Table 2). These seven L. monocytogenes isolates belonged to five different PFGE types (341, 342, 356, 361, and 365) and three ribotypes (DUP-1039C, DUP-1053E, and DUP-1062D).
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| DISCUSSION |
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L. monocytogenes in alheiras is found at considerable incidence and levels and shows considerable PFGE diversity.
The observation that 28 of 46 composite alheiras samples were positive for L. monocytogenes, including 14 samples with L. monocytogenes MPNs of >100/g, indicates that increased efforts to control L. monocytogenes in this product are critical. Overall PFGE type diversity for the L. monocytogenes isolates from alheiras was higher than subtype diversity detected by other methods, consistent with previous reports that showed a high discriminatory power of PFGE for subtype characterization of L. monocytogenes (8, 43, 47). The use of PFGE or another highly discriminatory subtyping method rather than potentially cheaper less discriminatory methods is thus advisable when performing initial evaluations of L. monocytogenes contamination patterns in specific food products.
Interestingly, we observed considerable subtype diversity within a given composite sample (up to five PFGE types/composite sample). These findings are consistent with previous studies that also describe the presence of multiple L. monocytogenes subtypes within a single composite sample (22, 41). These findings indicate the importance of subtyping multiple isolates in certain situations, particularly when testing composite samples. For example, for samples collected from processing plants or sites within a plant that show a high prevalence and history of multiple subtypes, subtype characterization of multiple isolates may be valuable, while for plants or sites that rarely show L. monocytogenes contamination, the subtyping of a single isolate may generally be sufficient (as contamination in these cases is likely to represent a single incident and/or source).
PFGE typing indicates sporadic and persistent L. monocytogenes contamination in alheiras.
Overall, PFGE data provided evidence that alheiras from some plants are characterized by sporadic (transient) L. monocytogenes contamination, as indicated by the isolation of multiple PFGE types and different PFGE types from composite samples collected on different dates. The presence of up to five different L. monocytogenes PFGE types in composite samples collected on a single date (e.g., processor 6) may suggest serious hygiene or sanitation problems, possibly including frequent cross-contamination. While raw meat used for alheira production is boiled for extended time periods, most likely representing an effective kill step for L. monocytogenes, some ingredients with presumably lower risks for the introduction of L. monocytogenes (e.g., bread and spices), are added after boiling and thus could be a source of L. monocytogenes. The most likely source of L. monocytogenes contamination in alheiras, though, is the processing plant environment, as a number of studies indicate that postprocessing contamination from environmental sources in processing plants represents the main source of L. monocytogenes contamination of finished products, including that of foods that do not undergo a listericidal heat treatment (e.g., cold smoked salmon) (24).
PFGE also provided evidence for the persistence of specific L. monocytogenes subtypes in alheiras from four processors. For each of these processors, samples collected on two different dates yielded identical PFGE types, most likely indicating that these PFGE types survived in a given plant over time and regularly contaminated products. These findings are consistent with a considerable number of studies that have shown the persistence of specific L. monocytogenes subtypes in meat, poultry, smoked fish, and dairy processing plants (2, 24, 25, 27, 48), including persistence in one plant for at least 10 years (23). As we were not able to gain access to processing plants for the study reported here, it was not possible to further define the specific site(s) of persistence or the specific source of contamination. The persistence of specific subtypes associated with products from a given processing plant could thus have occurred at any point in the production chain, including the processing plant, the raw material supply, or, for bulk products, the retail stage. As a number of studies that have found persistent L. monocytogenes contamination in foods have been able to identify definitive or likely sites of persistence in the environment of the processing plant (24, 27, 28), these plants represent the most likely site of persistence. As all samples tested here had to be collected from retail operations, it is theoretically possible that at least some of the L. monocytogenes isolated from bulk alheira samples originated from the retail environment, particularly since L. monocytogenes persistence in the retail environments has been reported previously (44). In general, the contamination of foods at the retail stage is most likely to occur in products that are further processed (e.g., sliced or mixed) or frequently handled (10), which does not apply to alheiras, which are sold whole (i.e., not sliced) and exposed to limited handling. Thus, contamination at the retail stage is likely to have had limited, if any, contributions to L. monocytogenes contamination found in the alheiras sampled in this study, particularly since 26 of 46 samples were vacuum or MAP packaged.
A considerable number of L. monocytogenes isolates from alheiras show attenuated invasiveness in Caco-2 cells.
A number of previous studies have suggested that L. monocytogenes strains may differ in virulence potential (14, 20) and that at least some L. monocytogenes strains isolated from foods may have a reduced likelihood to cause human disease. In particular, there is evidence that selected L. monocytogenes subtypes that are more common in foods than among human clinical cases show reduced abilities to invade the human intestinal epithelial Caco-2 cell line and thus may be virulence attenuated (20). Interestingly, some studies have identified specific mutations in the L. monocytogenes virulence gene inlA that appear to be at least partially responsible for the reduced virulence potential of these strains (34, 36, 40). The surface protein InlA, encoded by inlA, is critical in the pathogenesis of human listeriosis (20, 26) as it facilitates the invasion of the intestinal epithelial cells, a critical step preceding systemic infection. Previous studies have identified at least 12 different naturally occurring inlA mutations that lead to the production of secreted and truncated InlA molecules in L. monocytogenes (21, 32, 34-36, 40). In this study, we observed that a subpopulation of L. monocytogenes isolated from alheiras also showed reduced ability to invade Caco-2 cells and possessed PMSC mutations in inlA, which are predicted to lead to the production of secreted and truncated InlA. Interestingly, alheiras from two plants showed persistence as well as a high number of L. monocytogenes isolates with PMSC mutations, consistent with a previous report which indicated that L. monocytogenes subtypes with PMSCs are generally found at higher numbers in foods compared to other L. monocytogenes subtypes without these mutations (3).
While L. monocytogenes isolates with inlA PMSC mutations have so far been reported only for isolates collected in France (21, 34, 35, 40) and the United States (32), the isolation of L. monocytogenes with inlA PMSC mutations in an indigenous product produced in Portugal further suggests that these types of virulence-attenuated L. monocytogenes strains are widely distributed. The identification and characterization of these virulence-attenuated L. monocytogenes and their ecology and distribution will not only be critical for an accurate assessment of the human health hazard associated with L. monocytogenes-contaminated foods but may also provide an opportunity to focus control strategies and efforts on products found to contain those strains most likely to cause human disease, even though policies based on the precautionary principle may consider all L. monocytogenes strains an equal human health risk.
Conclusions.
While L. monocytogenes has been found in a variety of foods, including RTE deli meats, dairy products, and smoked and other RTE fish products, efforts to control L. monocytogenes are often focused on a few products that are most commonly linked to human listeriosis. For example, a risk assessment conducted in the United States by the FDA, USDA, and CDC (45) identified RTE deli meat products as the most common cause of human listeriosis cases in the United States (estimated to cause 1,599 human cases/year), followed by pasteurized milk; however, risk assessments may underestimate the public health hazards associated with regional foods, which are often not included in these assessments, as limited or no data on L. monocytogenes prevalence or levels are usually available for regional foods. Increased efforts for understanding L. monocytogenes contamination patterns in previously understudied foods are thus needed to reduce levels of human listeriosis and improve food attribution for this important food-borne disease. Our study of alheiras, a traditional Portuguese smoked meat product, highlights the challenges associated with studies of regional foods and may serve as a road map for future studies of other regional and locally distributed traditional and artisanal products, which often develop from homemade products into industrially produced foods with, at first, limited food safety controls. In our study, six of the nine processing plants for which samples were collected twice showed L. monocytogenes MPNs of >240/g in their products in the first sampling. Only one of these plants showed MPNs of >240/g in the second sampling (after plants had been notified of the results of the first sampling), indicating improvements which may already have a positive public health impact. Even though samples could not be collected inside the plants, the use of molecular subtyping methods provided important initial information about L. monocytogenes contamination patterns. As the alheira processing plants included in this study have started to permit environmental sampling of the facilities, likely as a consequence of this study, continued application of subtyping methods to characterize L. monocytogenes from different samples (e.g., raw materials, partially processed sausages, and ingredients) will facilitate the identification of contamination sources.
| ACKNOWLEDGMENTS |
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We thank V. Ferreira and J. Barbosa for help with L. monocytogenes enumeration. We also thank R. Orsi, K. Nightingale, E. Fugett, S. Millilo, Y. Soyer, E. Fortes, and R. Ivy for help with laboratory techniques, data analysis, and manuscript review.
| FOOTNOTES |
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Published ahead of print on 20 April 2007. ![]()
Supplemental material for this article may be found at http://aem.asm.org/. ![]()
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