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Applied and Environmental Microbiology, August 2007, p. 4867-4873, Vol. 73, No. 15
0099-2240/07/$08.00+0 doi:10.1128/AEM.00584-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

ina,1
Maria Rudawska,2*
Tomasz Leski,2
Audrius Skridaila,1
Edvardas Riep
as,3 and
Michal Iwanski2
Botanical Garden of Vilnius University, 43 Kair
nu Str., LT-10239 Vilnius 40, Lithuania,1
Institute of Dendrology, Polish Academy of Sciences, 5 Parkowa Str., 62-035 Kórnik, Poland,2
Department of Sylviculture, Lithuanian University of Agriculture, 11 Studentu Str., Akademija, LT-53361 Kaunas District, Lithuania3
Received 14 March 2007/ Accepted 4 June 2007
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ECM fungi naturally established in nurseries are diverse, and their establishment depends on several factors, including host species relationships, sylvicultural practices, and nursery conditions (11, 35). Early differences in ECM colonization of tree seedlings may affect their performance after outplanting to forest sites (30). The application of forest litter to nursery-grown seedlings can be useful in enhancing ECM colonization and the field performance of outplanted seedlings (8, 47).
In forest nurseries, attempts have been made to use various germination media instead of mineral soils. The Dunemann system of nursery practice demonstrated that spruce needles are a good medium for raising conifer seedlings (24). A series of experiments following the Dunemann scheme showed that germination, growth, and survival are better in spruce litter than in mineral soils (27). However, this material is not always available in nursery practice, and other more accessible leaf litters are also applied.
The quantity, quality, and heterogeneity of soil organic matter likely have a significant influence on the structure of mycorrhizal fungal communities. Mycorrhizal fungi can, through the production of extracellular enzymes (46), use organic forms of soil nutrients. Also, some mycorrhizal fungi possess limited saprotrophic ability (9). There are in fact differences in the mycorrhizal fungi colonizing pine roots in artificially constructed mixtures of pine versus oak leaf litter (10, 31), and it has been suggested that this is due to differences in nutrient availability or the effect of leaf litter extracts on fungal growth (2). However, information about the effects of forest litter amendment on ECM colonization of P. sylvestris seedlings growing in nursery soil is scarce.
In this study, we measured the growth and development of Scots pine seedlings and assessed the impact of pine and oak litter on ECM colonization of the seedlings. Specifically, we addressed two questions: whether the addition of leaf litter to the growth medium improves the growth of Scots pine seedlings, and whether litter addition affects ECM colonization or community structure of Scots pine seedlings.
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In April 2004, the leaf litters were transferred to the nursery of Vilnius University Botanical Garden (54°41'N, 25°14'E) and spread in a 20-cm layer on a prepared bed. For the preparation of each growth medium, 40 kg/m2 of forest litter was used. The nursery test design was five complete blocks with five plots per control and pine and oak treatment, randomly allocated in each block.
The pine seeds originated from the local provenance of Labanoras (55°14'N, 25°44'E). A 5- by 5-cm sawing stencil was used. Seedlings, 1 and 2 years old, were manually maintained and were not fertilized. After 2 years of growth under nursery conditions, 25 seedlings per growth medium were randomly selected, and their stem heights and root collar diameters were measured. The seedlings were dried at 65 ± 2°C for 24 h, and dry mass was estimated.
Chemical analysis.
At the end of the experiment, the upper 15 cm of growth medium was collected from the controls and the pine and oak treatments. For each treatment, growth medium was sampled from five points of three randomly selected plots. The five samples from each plot were mixed and dried at 40°C. The foliar carbon content and nutrient composition were determined in three composite samples of the group of five seedlings per treatment. Soil samples and milled pine needles, approximately 2.5 g (dry weight) each, were digested in a mixture of spectrally pure concentrated HNO3 and HClO4 in a proportion of 4:1 (vol/vol), diluted with double-distilled water to yield 25 ml. The soil pH was determined using a soil suspension in 0.5 M KCl.
Carbon and nitrogen contents of the 2-year-old Scots pine seedling needles were measured using a 4010 elemental combustion system. The remaining macroelements, aluminum, and microelements (Fe, Mn, Cu, and Zn) were measured by atomic absorption spectroscopy (Varian 220 FS) with atomization in an air-acetylene flame. The accuracy of the analyses was checked against standard reference material, namely, pine needles (SRM 1575) and tomato leaves (SRM 1573a) (National Institute of Standards and Technology [http://ts.nist.gov/MeasurementServices/ReferenceMaterials/ARCHIVED_CERTIFICATES/archived_certificates.htm]).
Analysis of mycorrhizal community structure.
At the time of harvest, 25 seedlings per treatment were taken for mycorrhizal assessment (five seedlings from one randomly selected plot of each block). The growth medium was washed off and overall mycorrhizal development was examined, as described elsewhere (49). On average, approximately 250 root tips were counted per seedling.
ECM morphotypes were described based on macroscopic observations (color of the mantle, presence of rhizomorphs, and extramatrical hyphae and cystidia) and referred to a database used by workers in the Laboratory of Mycorrhizal Research at the Institute of Dendrology, Polish Academy of Sciences (29, 49, 53). Live roots were identified on the basis of their turgid appearance. The numbers of live mycorrhizae of each morphotype and dead fine roots were recorded. The relative abundance of each morphotype (number of root tips of each morphotype/total number of fine roots) was calculated for each sample.
Selected samples of morphotypes were stored in 2% cetyltrimethylammonium bromide buffer at room temperature for further analysis. DNA was extracted from one root tip per sample using the miniprep method (22). Fungal symbionts were identified using PCR amplification of the internal transcribed spacer (ITS) with primers ITS-1 and ITS-4 (56). The PCR reagents and their final concentrations were 20 mM Tris-HCl (pH 8.4), 50 mM KCl, 2.5 mM MgCl2, 0.05% W-1 (QIAGEN), 200 mM ultrapure dATP, dCTP, dGTP, and dTTP (QIAGEN), 0.2 mM of the two primers (IBB PAN, Warsaw, Poland), and 1.75 units Taq DNA polymerase (QIAGEN). The PCR amplification sequence consisted of a first step at 94°C for 10 min followed by 35 cycles of 40 s at 92°C, 40 s at 57°C, and 80 s at 72°C using a T3 thermocycler (Biometra). ITS products (10 µl) were mixed with 10 µl reaction mixture containing 5 units of HinfI, MboI, or TaqI enzyme (EurX, Gdansk, Poland) and incubated for 1 to 2 h at 37°C (HinfI and MboI) or 65°C (TaqI). The amplified products and the restriction fragments were electrophoresed on 1.5% and 2% high-resolution agarose gels (Prona), respectively, stained with ethidium bromide, and photographed under UV light using a Polaroid or charge-coupled device camera. A 100-bp Gene Ruler DNA ladder (Fermentas) was used as a size standard.
The sizes of the restriction fragments were determined using Taxotron software (SAS Pasteur Institute, Paris, France) and compared with a data bank maintained by the Laboratory of Mycorrhizal Research at the Institute of Dendrology. One or two samples of each unique restriction fragment length polymorphism (RFLP) pattern were sequenced (with the exception of the Cenococcum type). Sequencing was performed with a CEQ 20000XL automatic sequencer using primers ITS1 and ITS4 and a Beckman Coulter DTCS Quick Start chemistry kit. ITS-PCR products were sequenced in the forward and reverse directions and merged to a contig by using BioEdit and ClustalW software. Consensus sequences were constructed, with manual editing of ambiguous readings, and compared to published sequences in the GenBank or UNITE database (34) using the BLAST tool. Species-level identification of mycorrhizae was defined as the sharing of >98% ITS region sequence identity with the reference sequence.
Statistical analysis.
Soil nutrients, chemical composition of seedlings, growth parameters, ratio of live to dead mycorrhizae, and species richness were analyzed by two-way analysis of variance (ANOVA), with litter treatment and block as the main factors, followed by Tukey's honestly significant difference (HSD) test, with a significance level of a P value of <0.05. No homogeneity of variance was found, and therefore differences between litter treatments in relative abundance of morphotypes were tested with the Kruskal-Wallis and Mann-Whitney U tests. Computations were performed using the statistical software package Statistica 5.5.
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TABLE 1. Nutrient composition and pH of growth media at harvest of P. sylvestris seedlingsa
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TABLE 2. Growth and survival of P. sylvestris seedlings after 2 years of growth in a nursery with untreated soil and soil amended with pine litter or oak littera
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TABLE 3. Foliar nutrient composition of P. sylvestris seedlings after 2 years of growth in a nursery with untreated soil and soil amended with pine litter or oak littera
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FIG. 1. Ratio of live to dead mycorrhizae on P. sylvestris seedlings after 2 years of growth in a nursery with untreated soil and soil amended with pine litter or oak litter. Each bar shows the mean for 25 replicates ± standard error. Letters indicate significant differences between growth media at a P value of <0.05 (Tukey's test).
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TABLE 4. Description of mycorrhizal morphotypes
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Significant differences in ECM abundance were found depending on the litter addition (Kruskal-Wallis, P < 0.005) (Fig. 2). The suilloid type was most abundant in pine litter, intermediate in oak litter, and least abundant in control soil. Conversely, the wilcoxina type was most abundant in control soil, whereas there was no difference in abundance between pine and oak litter. C. geophillum was present in significantly lower abundance in oak litter than in control soil, whereas the dark-brown type was more abundant in oak litter than in control soil. There were no differences between soil types in the abundance of suilloid/wilcoxina and orange types.
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FIG. 2. Variations in the proportions of mycorrhizal morphotypes colonizing P. sylvestris seedlings after 2 years of growth in a nursery with untreated soil and soil amended with pine litter and oak litter. Each bar shows the mean for 25 replicates ± standard error. Letters indicate significant differences between growth media at a P value of <0.05 (Mann-Whitney U test).
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In our experimental system, a layer of pine or oak litter was placed on the surface of the nursery bed soil in order to mimic natural litter cover. There were significant differences in seedling growth and establishment in control soil versus the litter treatments. Oak litter appeared to be most favorable for seedling survival. With oak litter, the survival rate was more than 73%, whereas with the untreated control, only 44% of seedlings remained alive. Several physical and chemical factors may influence survival. Physical factors include humidity and temperature, which are affected by the depth of the litter layer. Field and greenhouse results show an increase in seedling establishment with a moderate litter layer but reduced emergence with a thick litter layer (18, 28). The litter layer acts as an interface between the soil surface and the atmosphere, providing the soil surface with a degree of protection from rain (5) and solar radiation (41) and buffering it against fluctuations in temperature (33, 45) and water content (23). In our study, a layer of humus (20 cm in the beginning of the experiment) effectively protected the growth medium against changes in air temperature and made seedlings more resistant to drought. It was especially effective in the oak litter treatment. Oak litter provides cooler and moister conditions (28), which might have been important during the dry and hot summers of 2004 and 2005, when the experiments were performed. An earlier study showed that litter addition improves the growth of dipterocarp seedlings in tropical rain forests (6).
As a major source of soil organic matter, litter often plays a role in determining the pH of the soil surface horizon. Compared to the pH in the control soil (untreated mineral bed soil, pH 6.1), the pH was lower in pine litter (5.8) and higher in oak litter (6.3). The increased pH in oak litter growth medium was probably related to the increased content of base cations (Ca, K, and Mg). The decreased pH in pine litter growth medium might be related to organic acids (including acetic acid, oxalic acid, humic acid, and tannic acid) liberated from litter. This is especially acute in soils under coniferous trees, such as pine, spruce, and fir trees, which return fewer base cations to the soil than do most deciduous trees (19).
In our experiment, the most pronounced effects of litter amendment were increases in the C/N ratio and C content. The C content was increased twofold in growth medium from the pine litter treatment and threefold in the growth medium of the oak litter treatment. These findings are consistent with the results of measurements obtained after a few years of litter addition (42, 45). Litter addition resulted also in higher total N, P, K, Ca, and Mg concentrations in oak growth medium than pine growth medium, and this is likely connected with the growth of seedlings and mycorrhizal development. Pine litter, but not oak litter, increased seedling height relative to the control (a 14% increase). Relative to the control, there were 36% and 32% increases in the dry weight of seedlings with pine and oak litter, respectively. This was primarily the result of better needle growth rather than enhanced root growth; root growth was also affected, but not significantly. Litter addition, particularly the addition of pine litter, also increased the ratio of live to dead mycorrhizae, suggesting increased root growth or decreased mortality in litter-treated plots. Soil moisture affects fine root biomass: a wet forest stand has more living than dead roots, and drought increases the mortality of fine roots (44).
The lack of a correlation between growth parameters and foliar nitrogen and phosphorus concentration led us to suppose that these were not growth-limiting factors. However, if the tissue concentrations of N and P are expressed as total needle accumulation (needle concentration times mass), uptake of N and P was significantly higher in plants from pine- and oak-amended soils than in plants grown in control soil. Some macroelements (K and Ca) and microelements (Fe, Mn, Cu, and Zn) also appeared to be more available in plants grown in soil amended with oak versus pine litter, but not all of the differences were statistically different.
Among the distinguished mycorrhizal morphotypes, eight different mycorrhizal taxa were identified: S. luteus, S. variegatus, W. mikolae, a Tuber species, a Tomentella species, C. geophilum, A. byssoides, and one ECM symbiont not identified to species level. One morphotype, designated the wilcoxina/suilloid type, consisted of two species (W. mikolae and S. luteus). Multispecies morphotypes are common in nursery conditions (M. Rudawska, personal communication) and reflect a succession of colonizations of Scots pine seedlings ranging from ectendomycorrhizal Wilcoxina to ECM suilloid fungi. The species diversity of mycorrhizal fungi observed in this nursery is consistent with the range described for Scots pine seedlings from bare-root forest nurseries (48, 29, 38).
Oak litter increases diversity of mycorrhizal fungi, as eight different species were found in this treatment in comparison to six for the control soil and five for the pine litter treatment. There is some evidence that growth and nutrient uptake of birch or pine seedlings increases with increasing ECM diversity on tree root systems (3, 4, 32). Higher ECM diversity is also important as a pool of genetic diversity which permits the species (both phytobiont and mycobiont) to react to environmental change. Thus, higher diversity of ECM symbionts may also ensure better protection against pathogens and consequently greater survival in nursery and after outplanting (55).
Suilloid, Wilcoxina, and Cenococcum mycorrhizal types were dominant on tested seedlings, irrespective of litter addition. A. byssoides and a Tuber sp. were found only in litter treatments. These taxa are generally found more often in nurseries with nutrient-rich soils (48, 49, 53), and both species are more abundant in fertilized plots than in unfertilized control plots (21). Appearance of these mycorrhizae on litter-amended seedlings may be a result of propagules introduced with the litter. It may also reflect the ability of leaf litter to create a new ecological niche wherein some species can utilize extra resources better than they can in mineral soil.
The addition of forest litter had a greater effect on the relative proportions of mycorrhizal symbionts than it did on the species diversity. Seedlings grown in untreated nursery soil were 40% colonized by W. mikolae, which exhibits predominantly stress-tolerant, ruderal colonization strategies (52) and is one of the most common symbionts of conifers grown in commercial nurseries (29, 38, 48, 49, 53, 54). Addition of litter reduced the abundance of this symbiont in favor of suilloid mycorrhizae, represented by S. luteus and S. variegatus. This phenomenon was particularly pronounced for pine litter; there was a 40% increase in the relative abundance of suilloid mycorrhizae colonizing seedlings grown in pine litter and a 25% increase for seedlings grown in oak litter. Thus, we conclude that suilloid mycorrhizae are better adapted to the conditions related to litter addition than W. mikolae. A previous study reported a similar litter-associated shift in the proportions of W. mikolae and Suillus granulatus mycorrhizae colonizing Pinus contorta seedlings regenerated after a stand-replacing fire (12). One may speculate that increased abundance of suilloid mycorrhizae after litter treatment affects seedling growth and survival. ECM associations enhance water uptake by their hosts (43), and this enhancement has been attributed in part to production of rhizomorphs and their function in water transport (16). Suilloid mycorrhizae are classified as a long-distance exploration type, with a thick mantle, abundant fan-shaped extramatrical hyphae, and highly differentiated hydrophobic rhizomorphs (1). These features may be attributed to better water supply and may have resulted in higher rates of growth and survival of seedlings in our experiment.
The increased percentage of suilloid mycorrhizae with the addition of pine and oak litter also implies their use of organic forms of litter nutrients through the production of extracellular enzymes (46). A number of Suillus species have been found to use organic N compounds (13). The mycelial systems of Suillus species have been shown to possess a wide range of enzyme activities that can degrade more recalcitrant plant compounds; this has been demonstrated both in pure cultures and in an intact mycelial system (13). There is some evidence that ectomycorrhiza formation by S. luteus increases the decomposition of organic substrates added to soil microcosms (14).
A few findings suggest that the addition of forest litter contributes to the control of mycorrhizal fungal communities (6, 10, 15, 31). Our finding that forest litter amendment influenced the relative proportions of individual mycorrhizal symbionts rather than the overall symbiont distribution is similar to another finding regarding P. contorta seedlings (12).
In conclusion, this study shows that changes in the supply of organic matter through litter manipulation may have far-reaching effects on soil chemistry, influencing the growth and survival of Scots pine seedlings and their mycorrhizal communities. Molecular methods enable precise determination of the composition of such communities and prediction of the relationships between different functional groups of fungi and the environmental variables of litter. Therefore, the potential exists for development of indicators of mycorrhizal diversity that could be incorporated into forest management in the future. However, to test the general applicability of relationships between fungi and litter variables, further surveys incorporating a broader range of litter types and tree species are required.
na and Barbara Werner (Institute of Dendrology, Polish Academy of Sciences) for technical assistance. We also thank three anonymous reviewers for comments on the manuscript. This research was funded by grant T-06052 from the Lithuanian State Science and Studies Foundation.
Published ahead of print on 8 June 2007. ![]()
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ski, M., M. Rudawska, and T. Leski. 2006. Mycorrhizal associations of nursery grown Scots pine (Pinus sylvestris L.) seedlings in Poland. Ann. For. Sci. 63:715-723.[CrossRef]
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