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Applied and Environmental Microbiology, March 2007, p. 1797-1802, Vol. 73, No. 6
0099-2240/07/$08.00+0 doi:10.1128/AEM.02426-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Department of Biofunctional Chemistry, Faculty of Agriculture, Kobe University, Rokko, Nada-ku, Kobe, Japan,1 Division of Biosystem Chemistry, Graduate School of Science and Technology, Kobe University, Rokko, Nada-ku, Kobe, Japan2
Received 15 October 2006/ Accepted 9 January 2007
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Several researchers have reported adaptation to QACs by aquatic organisms through their repeated exposure to these compounds (19) and the biodegradation of QACs by pure cultures of bacteria (18). McBain et al. showed that repeated exposure of pure cultures, especially Ralstonia sp., altered their susceptibility to QACs (11). In addition, a mixture of Pseudomonas sp. and Xanthomonas sp. isolated from soil and sewage grew well on medium containing decyltrimethylammonium salt as the sole carbon source. Xanthomonas sp. oxidized the terminal carbon of the alkyl chain of QAC (2). Pseudomonas sp. strain B1, isolated from activated sludge, grew well on hexadecyltrimethylammonium chloride (the C16 alkyl QAC in this report), using the compound as a carbon and energy source (17). However, strain B1 could not utilize the intermediate, trimethylamine, as a nitrogen source. Although these findings indicate the metabolic fates of QACs in an aquatic environment, little is known about the complete metabolic steps necessary for QACs for mineralization by pure cultures.
The present study examined the adaptation of strain 7-6, isolated from active sludge, to high concentrations of n-dodecyltrimethylammonium chloride (DTAC). Dual pathways for the metabolism of DTAC were proposed based on identification of the main metabolites by gas chromatography-mass spectrometry (GC-MS) analysis and utilization of the identified compounds for growth. In the isolate, combination of the major and miner metabolic pathways for DTAC results in effective metabolism of the surfactant.
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Sixteen bacteria able to degrade DTAC (final concentration, 0.05%) during growth were isolated. To allow the isolates to adapt to high concentrations of DTAC and to enhance their biodegradative capability, the concentration of DTAC in the basal medium was gradually increased in steps of 0.05% (wt/vol). After the isolate grew well and degraded the compound almost completely, the culture was inoculated with medium containing a much higher concentration of DTAC. Of the 16 isolates, strain 7-6 grew best on medium containing 0.4% (wt/vol) DTAC (15 mM) and 0.05% (wt/vol) NH4NO3 and completely degraded the surfactant in 2 days.
Identification of strain 7-6.
Strain 7-6 was identified according to morphological and biochemical criteria, such as the Gram reaction, flagellum type, catalase activity, oxidase activity, oxidation-fermentation test, and the production of diffusible fluorescent pigment, using methods described previously (5) and by analysis of the 16S rRNA gene, which was amplified following the methods of Edward et al. (3). The partial nucleotide sequence of the 16S rRNA gene of strain 7-6 reported here was deposited in the DDBJ, EMBL, and GenBank nucleotide sequence databases under accession number AB278070.
Isolation and quantification of the metabolites of DTAC.
Strain 7-6 was cultivated on DTAC medium containing 0.1% (wt/vol) DTAC (3.8 mM) as a sole carbon, nitrogen, and energy source and without NH4NO3. Fifty tubes were used, with cultures taken from five randomly chosen tubes every 7 h. After centrifugation, the supernatant of the culture was divided into four parts and processed as follows.
(i) The supernatant (3 ml) was adjusted to pH 3. The metabolites were extracted with 0.5 ml of ethyl acetate. The upper layer (sample 1) contained n-dodecanal, n-dodecyldimethylammonium, and lauric acid (see Fig. 4). These compounds were identified by GC and GC-MS as described below.
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FIG. 4. Proposed pathways of n-dodecyltrimethylammonium metabolism in Pseudomonas sp. strain 7-6. I, n-dodecyltrimethylammonium; II, n-dodecanal; III, lauric acid; IV, trimethylamine; V, dimethylamine; VI, n-dodecyldimethylamine.
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(iii) The supernatant (3 ml) was concentrated to dryness. The residues were dissolved in 3 ml of methanol containing 1.5 mg of pentafluorophenylhydrazine and 1 drop of 1 N HCl. After a 1-h incubation, the hydrazone derivative (sample 3) was analyzed by GC and GC-MS as described below.
(iv) The supernatant (10 ml) was mixed with 1 ml of benzenesulfonylchloride and 1 ml of 10 N NaOH, and the volume was brought up to 100 ml with distilled water. After a 30-min incubation, 5 ml of 10 N NaOH was added to the mixture, and the solution was incubated in boiling water for 30 min. The solution was adjusted to pH 7.0 and then concentrated to 20 ml with a rotary evaporator. The upper layer was concentrated to dryness, and the residue was dissolved in ethyl acetate. The ethyl acetate solution (sample 4) was analyzed by GC and GC-MS as described below.
Effects of various factors on growth and the degradation of DTAC.
Strain 7-6 was precultured in a test tube with 7 ml of DTAC medium containing 0.4% (wt/vol) DTAC (15 mM) and 0.05% (wt/vol) NH4NO3 at 30°C for 48 h with shaking. DTAC test medium containing 0.4% (wt/vol) DTAC (15 mM) and 0.05% (wt/vol) NH4NO3 was then inoculated with 150 µl of the preculture. The growth of strain 7-6 and the remaining concentration of DTAC were measured. All experiments were done in triplicate, and average values are shown.
Effects of aeration.
After 48 h of precultivation, 150 µl, 7 ml, or 21 ml of preculture was added to 7 ml (in test tube), 70 ml (in 500 ml-shaking flask), or 400 ml (in a 3-liter shaking flask), respectively, of fresh test medium.
Effects of carbon source.
The test medium also contained one of eight sugars (D-glucose, lactose, L-arabinose, D-mannose, D-galactose, fructose, sucrose, or maltose) or one of five organic acids (sodium acetate, disodium succinate, D,L-maleic acid, or trisodium citrate) as a supplement.
Effects of nitrogen source.
The test medium also contained sodium nitrate, ammonium chloride, urea, or one of 20 amino acids instead of ammonium nitrate.
Effects of the concentration of DTAC.
The test medium contained DTAC at a concentration ranging between 0.01% (wt/vol) (0.38 mM) and 3.0% (wt/vol) (114 mM).
Analytical methods.
QACs, including DTAC, were measured spectrophotometrically with Phloxine B (22). Metabolites of DTAC were analyzed by a Hitachi G-3900 gas chromatograph or a Hitachi M-2500 mass spectrometer with electron-impact ionization (70 eV) coupled to a Hitachi G-3000 gas chromatograph. A TC-1 fused silica capillary column (0.25 mm by 30 m; GL Science, Tokyo, Japan) was used. Helium gas was the carrier at a linear velocity of 35 ml/min. The column temperature was held at 125°C for 1 min and was then increased stepwise from 125 to 240°C at a rate of 3°C/min. Total carbon in the culture supernatant and in the cells was measured by using the modified Walkley-Black method (13). NH4+ in the culture fluid was measured by the indophenol blue method (21). Total nitrogen in the culture supernatant and the cells was determined by Kjeldahl digestion and steam distillation according to the instructions provided by the manufacturer (BÜCHI Labortechnik AG, Zurich, Switzerland). In this procedure, the amino nitrogen of organic materials and free ammonia are converted to NH4+ by Kjeldahl digestion unit K-424 (BÜCHI Labortechnik AG). The converted NH4+ is distilled from the digested solution and absorbed in boric acid solution by using distillation unit K-342 (BÜCHI Labortechnik AG). NH4+ was potentiometrically measured by pH and a conductivity combination meter HM-25R (DKK-TOA Corp., Tokyo, Japan). The dry weight of the bacteria was measured as follows: washed cells from the culture (1 ml) were dried in an oven at 105°C for 5 h, and the weight of the dried biomass was determined.
Chemicals.
QACs (see Table 1) including DTAC (molecular weight = 263.89) were purchased from Tokyo Kasie Kogyo (Tokyo, Japan). Phloxine B was from Nakarai Tesque (Kyoto, Japan). Benzenesulfonylchloride was from Wako Pure Chemicals (Osaka, Japan).
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TABLE 1. Growth of Pseudomonas sp. strain 7-6 on QACs
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Adaptation to high concentrations of DTAC.
The nonacclimated isolates, including strain 7-6, retained the ability to grow on medium containing DTAC at concentrations ranging between 0.005 and 0.05% without frequent transfer to fresh DTAC medium; however, these strains could not grow on 0.1% DTAC medium. Strains maintained on nutrient agar medium for 1 month also could not grow on 0.1% DTAC medium. The strain was therefore adapted to high concentrations of DTAC as follows: after almost completely degrading DTAC during growth, the culture was transferred to fresh medium containing a higher concentration of the surfactant. The DTAC concentration of the fresh medium was increased by 0.05%, whenever the culture was transferred. This stabilization on higher-concentration DTAC medium was repeated at a concentration range between 0.1 and 0.4%. Subsequently, the strain grew well on basal medium containing 0.4% (wt/vol) DTAC, even if it had been maintained for 1 month on basal medium containing 0.1% (wt/vol) DTAC.
Assimilation of DTAC and total carbon and nitrogen in the culture.
Strain 7-6 grew well on basal medium containing 0.1% (wt/vol) DTAC without NH4NO3 (Fig. 1A). Figure 2 shows the changes in total carbon and nitrogen in the supernatant of the culture and in the cells with an increasing number of bacterial cells reflecting the growth of strain 7-6 DTAC was almost completely utilized in 40 h. After 52 h of cultivation, 23% of the total carbon originally provided was detected in the culture supernatant and 18% of that was in the cells of the strain (Fig. 2A). Ammonium ion accumulated (Fig. 2B) but then disappeared. Approximately 30% of the total nitrogen originally provided was observed in the cells at 52 h of cultivation.
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FIG. 1. Growth of Pseudomonas sp. strain 7-6 on DTAC medium and metabolism of DTAC. (A) Strain 7-6 was cultivated on medium containing 0.1% (wt/vol) DTAC (3.8 mM) as the sole carbon, nitrogen, and energy source at 30°C with shaking. Growth was determined by measuring the optical density at 660 nm (OD600) ( ); the residual DTAC ( ) was measured spectrophotometrically. (B) Intermediates derived from DTAC, dodecanal ( ), n-dodecyldimethylamine ( ), formaldehyde (), lauric acid ( ), and trimethylamine ( ) were measured by GC. The analytical procedures are described in the text.
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FIG. 2. Analysis of total carbon and nitrogen in culture supernatants and cells of Pseudomonas sp. strain 7-6. Strain 7-6 was cultivated on DTAC medium containing 0.1% (wt/vol) DTAC (3.8 mM) as the sole carbon, nitrogen, and energy source (7 ml/test tube) at 30°C with shaking. After centrifugation, 14 ml of culture supernatant and the cells were divided and used for further analysis. (A) Total carbon in the supernatant ( ) was converted to D-glucose. (B) Total nitrogen in the supernatant ( ) was measured by using the Kjeldahl method. Ammonium ( ) released into the culture was measured by the indophenol blue method. Analytical procedures are described in the text.
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Strain 7-6 grew well in 0.4% (wt/vol) DTAC medium containing 0.02% (wt/vol) yeast extract and completely degraded the substrate in 48 h. Although the strain grew on 0.7% (wt/vol) DTAC medium, only 60% of the DTAC in the medium was degraded after 48 h (Fig. 3). The strain grew well and degraded DTAC completely at pH 7.0 to 7.5. At pH 6.5, 36% (wt/vol) of the DTAC remained after 72 h of cultivation. However, the strain was unable to grow at a pH of <6.0 and >8.5.
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FIG. 3. Effect of DTAC concentration on the growth of Pseudomonas sp. strain 7-6 and the degradation of DTAC. The test medium (7 ml in a test tube) contained DTAC at a concentration ranging between 0.01% (wt/vol) (0.38 mM) and 1.0% (wt/vol) (38 mM). Each culture was incubated until the growth of strain 7-6 reached stationary phase. Growth was determined by measuring the dry weight of the biomass (); residual DTAC ( ) in the culture was measured spectrophotometrically.
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Identification of the metabolites from DTAC.
Metabolites derived from DTAC were isolated from the culture supernatant and analyzed by GC and GC-MS (Table 2). Sample 1 was analyzed by GC and GC-MS, which revealed major peaks at 5.2, 6.5, and 7.1 min. The mass spectra and the GC retention times of metabolites I, II, and III agreed with those of n-dodecanal, n-dodecyldimethylammonium, and lauric acid, respectively. Analysis of pentafluorophenylhydrazone-derivatized sample 2 showed one major peak at 3.8 min. The mass spectrum and retention time agreed with those of authentic pentafluorophenylhydrazone-derivatized formaldehyde. The mass spectrum and GC retention time of sample 3, containing metabolite V, agreed with those of trimethylamine. Benzensulfonyl derivatization of sample 4 and subsequent analysis showed that the mass spectrum and GC retention time of metabolite VI agreed with those of benzensulfonyl-derivatized dimethylamine.
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TABLE 2. Mass spectra of the metabolites from DTAC
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Assimilation of the identified metabolites.
Strain 7-6 was cultivated on basal medium containing the identified metabolites as sole carbon or nitrogen sources instead of DTAC (Table 3). The strain could utilize n-dodecanal and lauric acid as carbon and energy sources and trimethylamine and dimethylamine as nitrogen sources. However, it grew poorly on test medium containing n-dodecyldimethylamine, degrading only 23% of the substrate.
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TABLE 3. Growth of strain 7-6 and degradation of identified metabolites
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Adaptation to QACs can be enhanced, for example, by continuous exposure. Regular exposure to QACs of gram-positive bacteria, such as Staphylococcus aureus, brings about their adaptation and resistance to these chemicals (16). Gram-negative bacteria, such as Pseudomonas spp., can adapt to sanitizers used in food-processing industries (9, 10). Langsrud et al. suggested that Pseudomonas spp. can adapt to survival in the presence of high concentrations of QACs. Pseudomonas aeruginosa strain PFRB, isolated from a stock solution of benzalkonium chloride, was exposed to QACs and gradually showed high-level resistance to hexadecyltrimethylammonium bromide (11 mM) (the C16 alkyl QAC in this report) (12). A strain used for disinfectants testing, Pseudomonas aeruginosa ATCC 15422, and Pseudomonas spp. isolated from cold-stored chicken developed tolerance to high concentrations of QACs after several rounds of reinoculations in Mueller-Hinton broth containing gradually higher amounts of QACs (10). The tested strains, Pseudomonas fluorescens and Pseudomonas lundensis, grew on broth containing didecyldimethylammonium chloride (DDAC) (0.11 mM).
Strain 7-6 can degrade QACs containing C6-C18 of alkyl groups, except octyltrimethylammonium chloride (C8). The toxicity of QACs increases with increasing chain length of the alkyl moiety (6). The DDAC-degrading bacterium Pseudomonas fluorescens TN4 showed a very similar pattern regarding specificity of the growth substrate (14). Strain TN4 grew on basal medium containing C10-C16 QACs but not on basal medium containing C18 QACs. Strain 7-6 did not grow well on test medium containing short-chain QACs, such as hexyltrimethylammonium chloride (C6) and octyltrimethylammonium chloride (C8). Thus, the enzyme in the initial degradation step in which the C-N bond of QAC is cleaved may not be able to attack toward short-chain substrates.
Analyses of total carbon and nitrogen in the culture and identification of the metabolites from DTAC indicated that strain 7-6 readily utilizes DTAC as the sole carbon and nitrogen source. GC-MS analysis (Table 2) and bacterial utilization of the identified metabolites (Table 3) support our hypothesis of two pathways for DTAC metabolism in strain 7-6 (Fig. 4). Pathways 1 and 2 differ in the order in which groups are removed from DTAC. In pathway 1, DTAC (compound I, Fig. 4) was converted to lauric acid (compound III, Fig. 4) via n-dodecanal (compound II, Fig. 4), with the release of trimethylamine (compound IV, Fig. 4). In pathway 2, DTAC was converted to n-dodecyldimethylamine (compound VI, Fig. 4) with the release of formaldehyde. The metabolite was converted into n-dodecanal, with the release of dimethylamine (compound V, Fig. 4). Strain 7-6 can utilize n-dodecanal and lauric acid as a sole carbon sources and trimethylamine and dimethylamine as sole nitrogen sources (Table 3). Trimethylamine would be converted to ammonium via dimethylamine and methylamine. Strain NT4 also utilizes DDAC as the sole carbon source. However, Nishihara et al. suggested that the metabolite dimethylamine, from DDAC, is further metabolized by strain TN4 and/or evaporated from the medium due to its volatility (14). Xanthomonas sp. and Pseudomonas sp. strain B1 utilize QAC as a carbon and energy source but not as a nitrogen source (2, 17). To our knowledge, our report provides the first evidence of a pseudomonad that can utilize QAC as the sole carbon, nitrogen, and energy source. Strain 7-6, precultured on DTAC medium, was also able to utilize intermediates from DTAC as the sole carbon or nitrogen source. However, among the six substrates tested, including DTAC, the bacterium did not readily metabolize n-dodecyldimethylamine, suggesting that proposed pathway 1 is the main route for DTAC assimilation.
We attempted to obtain additional evidence for the conversion of DTAC. Unfortunately, cell extracts from strain 7-6 grown on DTAC medium did not always show activity toward the compound. GC analysis indicated that the extracts converted DTAC to n-dodecanal and trimethylamine in the presence of NAD(P)H, but the extract lost activity shortly after it had been prepared. Thus, it may be that DTAC denatures the enzymes involved in its metabolism. The enzyme in the initial step of DTAC metabolism is probably a monooxygenase, as reported by van Ginkel et al. (17). We are currently attempting to establish enzyme assay for DTAC metabolism.
Published ahead of print on 19 January 2007. ![]()
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