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Applied and Environmental Microbiology, April 2007, p. 2306-2313, Vol. 73, No. 7
0099-2240/07/$08.00+0 doi:10.1128/AEM.01741-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
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Department of Ocean, Earth and Atmospheric Sciences, Old Dominion University, 4600 Elkhorn Ave., Norfolk, Virginia 23529
Received 24 July 2006/ Accepted 24 January 2007
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A variety of stains that fluoresce green under excitation by light has been widely adopted or proposed to measure the viability, physiological state, or the presence of microalgae, including studies of phytoplankton apoptosis (12, 31), population dynamics (14, 29, 30), enumeration of dinoflagellate cysts in marine sediment (1, 2, 3, 18, 22, 23, 33), microzooplankton grazing (15, 16, 21), pollutant stresses on algal cells (4, 19), metabolic activity of algae (10), and efficacy testing of ballast water treatment technologies.
There are reports of GAF by microalgae interfering with green-fluorescing stains (10, 21, 31). Solutions have included either application of arbitrary criteria (31) or determining signal intensity by difference before and after staining (10). Some researchers, however, seem not to have been aware of possible interference from GAF with the desired green staining and instead were concerned only with interference from chlorophyll red autofluorescence (RAF) (16, 25). Of relevance, GAF can be compounded by interactions with chemicals, such as copper ions (19) and glutaraldehyde (20, 27).
In reviewing these studies of GAF in microalgae, we noted that a quantitative characterization of GAF and comprehensive observations across multiple taxa and varied physiological conditions had not been performed. These deficits make it difficult to assess and address potential limitations of using green-fluorescing stains to measure the viability of microalgal cells. Because we needed to judge the staining efficiency of widely used green-fluorescing stains (e.g., fluorescein diacetate, 5-chloromethylfluorescein diacetate [CMFDA]) using epifluorescence microscopy, we conducted a series of observations and measurements of GAF under blue light excitation in different taxa of microalgae (mainly dinoflagellates and diatoms) encompassing both marine and freshwater forms. Our study focused, although not exclusively, on GAF rather than the red, yellow, and orange autofluorescence elicited by blue light excitation, because of the popular use of green fluorescence staining.
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Sample preparation for microscopic observation.
Algal cells were fixed with formaldehyde (1% [vol/vol] final concentration) for different times (as specified in Table 1, below), rather than glutaraldehyde, which can cause GAF of cells (reference 32 and personal observation). Other cells were killed with heat (80°C water bath for 15 min). To test the effect of pH on GAF intensity, the pH of medium containing G. catenatum or C. hystrix was adjusted with 1 N HCl or 1 N NaOH, and GAF intensity was measured within 3 h. Measurement of each sample took about 30 min. The brackish and freshwater field samples and the cysts from the ship's ballast tank sediment were observed and measured immediately after sampling or after fixation (see Table 1, below).
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TABLE 1. Relative intensities of GAF exhibited by individual cells of various microalgaea
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Light microscope observations.
Cells were observed with an Olympus BX50 light microscope (Olympus Optical Co., Tokyo, Japan) using bright field and epifluorescence illumination. For epifluorescence, two kinds of filter cubes were used: U-MNB (exciter BP470-490, dichroic DM500, and emitter LP515; Olympus Optical Co.) for GAF and chlorophyll-induced RAF, as well as for yellow and orange autofluorescence; U-N31001 (exciter D480/30X, dichroic 505DCLP, and emitter D535/40m; ChromaTechnology Corp., Vermont) for green fluorescence only (the emitter of the U-N31001 cube allows a relatively even transmission efficiency of 81 to 87% over the wavelength window from 520 to 554 nm). Images were captured with a DP70 digital camera (Olympus Optical Co.) and processed with DPController/Manager software (Olympus Optical Co.). Most observations and measurements were conducted at a total magnification of x500 (10 x 40 x 1.25).
Spectrometric measurements of fluorescence intensity of individual cells.
An S2000 miniature fiber optic spectrometer (Ocean Optics, Inc., Florida), connected to the microscope's viewing port, was used to measure the fluorescence intensity of individual cells; data were collected with OOIBase v1.5 software (Ocean Optics, Inc.). Filter cube U-N31001 was used when measuring green fluorescence only (all green fluorescence data in Table 1 and Fig. 2 and 4, below), while filter cube U-MNB was used when measuring GAF and RAF (data in Table 1 and Fig. 3, below). Filter cube U-MWU (exciter BP330-385, dichroic DM400, and emitter LP420; Olympus Optical Co.) was used only to expose cells to UV light; their subsequent GAF was measured after passing through filter cube U-N31001. All measurements were conducted at the same magnification (x500), field area (controlled with a shutter), and positioning of the fiber optics cable. The integration time (during which the accumulated irradiance was counted) was adjusted from sample to sample according to the signal intensity of fluorescence (1 to 10 seconds for GAF and 50 milliseconds for RAF), but within any one sample a constant integration time was used for all cells. The number of individual cells measured for each sample (Table 1) ranged from 5 to 40 (median, 21), reflecting both cell density and the need to minimize cells' exposure to a warm microscope slide. All comparisons between samples and treatments were based on relative fluorescence intensity, defined and calculated as 1/1,000 of the irradiance counts, integrated over 10 seconds, at the peak wavelength of the fluorescence spectrum.
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FIG. 2. Relative intensity of GAF in stained, live, or formaldehyde-fixed cells of (A) Gymnodinium catenatum and (B) Corethron hystrix. CMFDA and SYTOX green stains were applied to live and dead cells, respectively. The relative intensity of chlorophyll-induced RAF in live G. catenatum cells is shown for comparison. Bars represent means ± 1 standard deviation for n = 10 to 35 cells. Corresponding data are presented in Table 1. AU, arbitrary units.
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FIG. 4. For an individual cell of G. catenatum, the time course of additional GAF elicited by exposure to UV light (330 to 385 nm; filter cube U-MWU) is shown. Prior to all but the first measurement, the cell was exposed for 5 seconds to UV light and then to blue light (470 to 490 nm; filter cube U-N31001) while the intensity of GAF was determined. Within 1 to 2 min, the next exposure to UV light and subsequent measurement of GAF was begun. The first measurement, however, represents the relative intensity of GAF elicited by blue light alone. Compare these values with those shown in Fig. 3A. The time course shown here is representative of those seen in other cells of this species (G. catenatum; n = 4 cells) and another species (C. hystrix; n = 4 cells). AU, arbitrary units.
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FIG. 3. Temporal dynamics in the relative intensity of GAF and chlorophyll-induced RAF in (A) Gymnodinium catenatum (vegetative cells) and (B) Corethron hystrix. Individual cells were exposed continuously to blue light (470 to 490 nm; filter cube U-MNB). From 40 (C. hystrix) or 45 (G. catenatum) spectra evenly spaced over 10 (C. hystrix) or 15 (G. catenatum) minutes, 12 for each are shown here in chronological order (numbers indicate the order of measurements). These spectra are representative of those observed emanating from other cells (for G. catenatum, n = 5 cells; for C. hystrix, n = 4 cells). AU, arbitrary units.
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FIG. 1. Micrographs of GAF observed in microalgae, obtained using an epifluorescence microscope installed with filter cubes U-MNB (for chlorophyll RAF and green to orange autofluorescence) and U-N31001 (for GAF only). Unless noted otherwise, all images are of live cells. (a to g, m) Gymnodinium catenatum vegetative cells under bright field (a; arrow indicates nucleus), the same cells exhibiting RAF (b), the same cells exhibiting GAF (c; the arrow indicates eyespot), cyst under bright field (d), the same cyst observed with U-MNB filter (e), GAF of the cyst (f; the arrow indicates the lipid accumulation body), a vegetative cell indicating stronger GAF in eyespot and accumulation bodies (g; arrows), GAF of vegetative cells in a long chain after fixation with formaldehyde (m). (h to k) Corethron hystrix GAF (h; note the absence of GAF in the nucleus, indicated by the arrow), a cell observed under bright field (i; the arrow indicates an unidentified endosymbiont microalga in the C. hystrix cell), RAF (j), or GAF (k). (l) GAF of Takayama acrochocha. (n to p) Akashiwo sanguinea cell observed under bright field (n; the arrow indicates the nucleus), GAF (o; the arrow indicates the eyespot), or GAF of the same cell after breakage (p; the arrow indicates the absence of GAF in the nucleus). (q) GAF of a colony of Woronichinia sp. (the arrow indicates the aerotopes). (r) GAF of Pediastrum sp. (s) GAF of Desmodesmus sp. (the arrow indicates the spines). (t) GAF of a cyst from ballast tank sediment stored at 4°C for about 4 years. (u) GAF of Prorocentrum micans (note the absence of GAF in the spine and plates). Bars: 20 µm (a to k, m to p, t, and u) or 10 µm (l and q to s).
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Distribution of GAF within cells.
In all species, GAF generally was distributed evenly in the cytoplasm and mostly found in association with chloroplasts (Fig. 1; see also the micrographs in the supplemental material). It also occurred, however, in organelles lacking chlorophyll, such as accumulation bodies of vegetative cells and cysts (Fig. 1f, g, and l) and cell spines of green algae (Fig. 1r and s) but not spines of dinoflagellates (Fig. 1u), aerotopes (gas vacuoles) of cyanobacteria (Fig. 1q), cysts which had completely or partly lost chlorophyll (Fig. 1e, f, and t), and in particular, dinoflagellate stigma (eyespots), where the GAF was strongest in G. catenatum, A. sanguinea, and T. acrochocha (Fig. 1c, g, o, and p). GAF was not observed in the nucleus (Fig. 1a to c and n to p) or thecal plates of armored dinoflagellates (Fig. 1u). In chloroplasts or cytoplasm, GAF appeared to emanate from discrete bodies (Fig. 1c, h, m, and o). The brightness of GAF was not correlated with the presence or intensity of chlorophyll RAF, and cells fluoresced green even more strongly after their RAF was diminished following cell death or fixation by formaldehyde (see Fig. 2 and 3, below). Therefore, GAF seems not to be induced by chlorophyll, although these observations alone did not exclude the possibility GAF is related to the degradation products of chlorophyll.
Intensity of GAF and its change with storage time and pH.
For G. catenatum, the mean relative intensity of GAF in live vegetative cells was 0.6% that of chlorophyll-induced RAF (3.4 versus 584.4), 0.25% that exhibited by formaldehyde-fixed cells stained with SYTOX green (3.4 versus 1,352.8), and equal to the GAF of live cysts (3.4 versus 3.4) (Table 1; Fig. 2A). GAF intensity exhibited by live vegetative cells stained with the vital dye CMFDA was only slightly higher, although statistically significant (P < 0.05), than that of unstained live cells and cysts (4.8 versus 3.4) (Table 1; Fig. 2A) . GAF intensity in formaldehyde-fixed cells was greater than that of live cells (P < 0.05) and increased with time after fixation (P < 0.05) by up to 4.5 to 5.3 times after 3 days of fixation, following which intensity decreased (P < 0.05) through 168 h (Table 1; Fig. 2A). The significantly greater GAF after 3 weeks of fixation (Fig. 2A) is thought to be related to diffusion of the GAF-causing molecule(s), as discussed below.
For C. hystrix, the mean relative intensity of GAF in live cells was 8.8% that exhibited by formaldehyde-fixed and SYTOX green-stained cells (1.0 versus 11.1) and 64% the intensity of live cells stained with CMFDA (1.0 versus 1.5; P < 0.01) (Table 1; Fig. 2B). As with G. catenatum, GAF intensity increased following formaldehyde fixation and after 40 h was significantly higher than that of live cells (P < 0.05). The increase continued for 130 h and then faded somewhat by 180 h (1.9 versus 1.5; P = 0.08) (Table 1; Fig. 2B). Significantly increased GAF intensity over time following formaldehyde fixation (P < 0.001) was also observed in A. sanguinea and P. micans (Table 1).
The average GAF intensity of various unidentified cysts (n = 40) from ballast tank sediment stored at 4°C for 4 years was eight times that observed in live cysts of G. catenatum (27.0 versus 3.4) and also higher than that of fixed G. catenatum vegetative cells stored for 3 weeks (17.7) (Table 1).
The GAF intensity of G. catenatum and C. hystrix was significantly affected by pH (P < 0.001) over the range 4.0 to 9.5 for G. catenatum and 4.5 to 8.8 for C. hystrix, but with no discernible common pattern (Table 1). For both species, loss of cellular contents occurred at pH values of <5.
Temporal dynamics of GAF and RAF elicited by blue and UV light excitation.
By exposing algal cells continuously to blue light and measuring periodically the intensity of GAF, RAF, and yellow-orange autofluorescence using filter cube U-MNB, we observed that the intensity of RAF decayed monotonically to extinction in a few minutes. On the other hand, the intensities of GAF and yellow-orange autofluorescence (510 to 620 nm), first increased significantly and then decayed for both G. catenatum and C. hystrix (Fig. 3A and B).
Using filter cube U-MWU to expose cells of G. catenatum and C. hystrix to UV light for 5-second intervals before measuring GAF and RAF, a similar pattern was observed, i.e., RAF decayed quickly and GAF increased up to fivefold after 45 seconds of exposure and then decreased (Fig. 4). The intensity after 160 seconds of UV exposure, however, remained more than twice that at the start.
Observations of GAF after chlorophyll extraction.
There was no noticeable reduction in GAF when chlorophyll was extracted from formaldehyde-fixed vegetative cells and cysts of S. trochoidea. In fact, the GAF of vegetative cells tended to increase. These observations, especially in light of previous measurements on cysts of G. catenatum and S. trochoidea (28), suggested chlorophyll is not responsible for GAF.
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The wavelengths of GAF maxima, at least in G. catenatum, shifted upward from 530 nm or less for live cells to 542 to 549 nm for fixed cells (Table 1). The shift suggests multiple compounds or derivatives of a single compound are stimulated to produce the GAF. Furthermore, the same group of molecules causing GAF may also be responsible for other autofluorescence, because algal cells fluoresced yellow and orange (Fig. 3), with a strength equivalent to GAF, under blue light (470 to 490 nm) excitation. While Kawai (17) suggested GAF was caused by a flavin-like molecule, Dorsey et al. (10) considered luciferin compounds to be responsible for GAF in natural populations of microalgae. Recently, Fujita et al. (13) isolated a flavoprotein that has a flavin mononucleotide as a chromophore from the green-fluorescing flagellum of the brown alga Scytosiphon lomentaria.
G. catenatum and C. hystrix exhibited a similar temporal pattern in GAF intensity following fixation (Fig. 2A and B). The pattern suggests at least two hypotheses. First, a GAF-causing molecule(s) was produced and either decomposed or leaked from cells over 168 h, and another such molecule(s) emerged between 168 h and 3 weeks. Second, and more simply, the pattern results from the interplay of production and leakage. Evidence for this latter thought comes from the history of the 3-week sample. For each alga, all previous samples (8 to 168 h) were taken from a single tube, which was well mixed before each sampling. The 3-week sample comprised its own tube, however, and was not mixed except once before the sample was taken. Therefore, the temporal pattern in GAF is consistent with the idea that mixing hastened the leakage of the GAF-causing molecule(s) from the cells. By extension, the nonlinear temporal pattern in GAF intensity caused by UV exposure (Fig. 4) is tentatively proposed to reflect simultaneous, short-term production and decomposition of the molecule(s) responsible for GAF, and after 60 seconds of exposure, decomposition exceeded production.
Taxonomic implications of GAF.
The wide distribution of GAF we report here, together with its observation in the flagellum of golden and brown algae (8, 17), led us to conclude the utility of GAF's presence or absence as a taxonomic feature is limited. That GAF explicitly was not observed in cytoplasts of golden and brown algae (8, 17) or in some species of dinoflagellates (6, 11, 27) may be attributed to its relatively weak signal in live samples, which can be overwhelmed by the much stronger signal of chlorophyll RAF.
Implications of GAF to green fluorescence staining, morphological study, and visualization of dinoflagellate cysts.
Green fluorescence staining has been widely adopted in a variety of applications (see the introduction). In applying such fluorescent stains, therefore, it is critical to have a well-defined demarcation between the introduced green fluorescence and GAF. While different species of microalgae exhibit GAF with various intensities at different physiological states, the signal is generally bright enough to visualize using epifluorescence microscopy. The signal is not stable over time, however, even if only one algal species is considered. In our study, for example, GAF of G. catenatum increased appreciably with time after fixation or following 5 seconds' excitation by UV light. Lage et al. (19) reported a three- to fourfold increase in GAF for the dinoflagellate Amphidinium carterae when cells were exposed to a toxic dose of copper. In these and other scenarios, therefore, GAF could confound green-fluorescing, vital-staining studies, especially in cases where the stained cells are observed and evaluated microscopically (see Fig. 1 and Table 1 for the comparison between CMFDA staining and cells stored for days or weeks after fixation). Even for cases where GAF can be quantitatively measured by flow cytometry, its intensity in fixed cells, at least for 3 weeks following fixation (Table 1), may be strong enough to smear the boundary of stained and unstained cells in cytograms. Widely used nucleic acids stains like SYTOX green (29) produce green fluorescence strong enough to overwhelm the GAF of microalgal cells; however, such stains are generally applicable for mortal staining only.
If present, GAF may provide a useful tool to visualize certain cellular components of microalgae, such as eyespots, accumulation bodies, nuclei, aerotopes, spines, and even chloroplasts. Furthermore, the intracellular absence of GAF may prove useful. For example, the location and shape of the nucleus, an important taxonomic feature of dinoflagellates, can be easily visualized by adjusting the focus (Fig. 1c and p), since the nucleus does not exhibit GAF. The absence of GAF in the plates of armored dinoflagellate species (Fig. 1u; see also the supplemental material) is also useful to visualize their cellular structures. An established use of GAF is to detect infection of phytoplankton by the parasitic dinoflagellate Amoebophrya sp. (7, 24, 26, 34); the parasite exhibits GAF but no chlorophyll RAF. Its use for quantifying parasites in the population, however, can be problematic, as GAF is typically weak in early infections, or even absent in some strains, or fades rapidly following fixation (24, 34).
More importantly, perhaps, GAF could be used in place of the primuline staining method (33) to visualize and enumerate dinoflagellate cysts in marine and estuarine sediments in the context of anticipating and monitoring harmful algal blooms and in tracking potentially harmful dinoflagellates transported in ships' ballast tanks (28). Since the primuline staining protocol is very time-consuming (at least 2 days) and requires chemicals, using GAF alone for the same purpose would reduce costs significantly.
The statements, findings, conclusions, and recommendations are those of the authors and do not necessarily reflect the views of the National Oceanic and Atmospheric Administration or the U.S. Department of Commerce.
We thank Martina Doblin for her invaluable help to make this study possible, Richard Zimmerman and Charles Mazel for their useful comments, and Xinping Hu for editing the supplementary micrographs. We are also grateful for two anonymous reviewers' constructive comments.
Published ahead of print on 2 February 2007. ![]()
Supplemental material for this article may be found at http://aem.asm.org/. ![]()
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